Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:05:31 (2267919): wrapper (7.7.26015): starting
14:05:31 (2267919): wrapper: running run_atlas (--nthreads 12)
[2026-02-22 14:05:31] Arguments: --nthreads 12
[2026-02-22 14:05:31] Threads: 12
[2026-02-22 14:05:31] Checking for CVMFS
[2026-02-22 14:05:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-22 14:05:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-22 14:05:33] Running cvmfs_config stat atlas.cern.ch
[2026-02-22 14:05:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-22 14:05:34] 2.13.3.0 10819 155733 357648 156530 0 360 24563423 32935937 21251 16776704 0 676357385 99.699 530780380 33215 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-22 14:05:34] CVMFS is ok
[2026-02-22 14:05:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-22 14:05:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-22 14:05:34] Further information can be found at the LHC@home message board.
[2026-02-22 14:05:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-22 14:05:34] Checking for apptainer binary...
[2026-02-22 14:05:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-22 14:05:34] Running /usr/bin/apptainer --version
[2026-02-22 14:05:34] apptainer version 1.4.5-2.el9
[2026-02-22 14:05:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-22 14:05:34] c-8-37.aglt2.org
[2026-02-22 14:05:34] apptainer works
[2026-02-22 14:05:34] Set ATHENA_PROC_NUMBER=12
[2026-02-22 14:05:34] Set ATHENA_CORE_NUMBER=12
[2026-02-22 14:05:35] Starting ATLAS job with PandaID=7017520135
[2026-02-22 14:05:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:48:47 (4133278): wrapper (7.7.26015): starting
00:48:47 (4133278): wrapper: running run_atlas (--nthreads 12)
[2026-02-23 00:48:47] Arguments: --nthreads 12
[2026-02-23 00:48:47] Threads: 12
[2026-02-23 00:48:47] This job has been restarted, cleaning up previous attempt
[2026-02-23 00:48:47] Checking for CVMFS
[2026-02-23 00:48:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-23 00:48:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-23 00:48:48] Running cvmfs_config stat atlas.cern.ch
[2026-02-23 00:48:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-23 00:48:49] 2.13.3.0 10819 156377 355692 156547 2 281 29467692 32935936 19664 16776704 0 677902006 99.700 531791807 33211 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-23 00:48:49] CVMFS is ok
[2026-02-23 00:48:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-23 00:48:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-23 00:48:49] Further information can be found at the LHC@home message board.
[2026-02-23 00:48:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-23 00:48:49] Checking for apptainer binary...
[2026-02-23 00:48:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-23 00:48:49] Running /usr/bin/apptainer --version
[2026-02-23 00:48:49] apptainer version 1.4.5-2.el9
[2026-02-23 00:48:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-23 00:48:49] c-8-37.aglt2.org
[2026-02-23 00:48:49] apptainer works
[2026-02-23 00:48:49] Set ATHENA_PROC_NUMBER=12
[2026-02-23 00:48:49] Set ATHENA_CORE_NUMBER=12
[2026-02-23 00:48:49] Starting ATLAS job with PandaID=7017520135
[2026-02-23 00:48:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-23 09:32:47]  *** The last 200 lines of the pilot log: ***
[2026-02-23 09:32:47] 2026-02-23 14:31:49,354 | INFO     | log transfer has been attempted: DONE
[2026-02-23 09:32:47] 2026-02-23 14:31:49,354 | INFO     | job 7017520135 has finished - writing final server update
[2026-02-23 09:32:47] 2026-02-23 14:31:49,355 | INFO     | total number of processed events: 400 (read)
[2026-02-23 09:32:47] 2026-02-23 14:31:49,415 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7017520135/memory_monitor_summary.json (trf name=prmon)
[2026-02-23 09:32:47] 2026-02-23 14:31:49,416 | INFO     | extracted standard info from prmon json
[2026-02-23 09:32:47] 2026-02-23 14:31:49,416 | INFO     | extracted standard memory fields from prmon json
[2026-02-23 09:32:47] 2026-02-23 14:31:49,416 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-23 09:32:47] 2026-02-23 14:31:49,464 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-23 09:32:47] 2026-02-23 14:31:49,464 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-23 09:32:47] 2026-02-23 14:31:49,591 | INFO     | fitting pss+swap vs Time
[2026-02-23 09:32:47] 2026-02-23 14:31:49,592 | INFO     | sum of square deviations: 41864419116.98617
[2026-02-23 09:32:47] 2026-02-23 14:31:49,662 | INFO     | sum of deviations: 57229058851.8168
[2026-02-23 09:32:47] 2026-02-23 14:31:49,663 | INFO     | mean x: 1771841460.1325536
[2026-02-23 09:32:47] 2026-02-23 14:31:49,663 | INFO     | mean y: 2759454.208576998
[2026-02-23 09:32:47] 2026-02-23 14:31:49,663 | INFO     | intersect: -2419364663.0438304
[2026-02-23 09:32:47] 2026-02-23 14:31:49,664 | INFO     | chi2: 3.7374833523508904
[2026-02-23 09:32:47] 2026-02-23 14:31:49,680 | INFO     | sum of square deviations: 40652425598.50982
[2026-02-23 09:32:47] 2026-02-23 14:31:49,723 | INFO     | sum of deviations: 131678004496.05719
[2026-02-23 09:32:47] 2026-02-23 14:31:49,760 | INFO     | mean x: 1771841307.6437008
[2026-02-23 09:32:47] 2026-02-23 14:31:49,760 | INFO     | mean y: 2768766.033464567
[2026-02-23 09:32:47] 2026-02-23 14:31:49,760 | INFO     | intersect: -5736434350.12105
[2026-02-23 09:32:47] 2026-02-23 14:31:49,761 | INFO     | chi2: 2.1912859555346955
[2026-02-23 09:32:47] 2026-02-23 14:31:49,761 | INFO     | current chi2=2.1912859555346955 (change=41.37001428631464 %)
[2026-02-23 09:32:47] 2026-02-23 14:31:49,762 | INFO     | sum of square deviations: 39463997848.517204
[2026-02-23 09:32:47] 2026-02-23 14:31:49,858 | INFO     | sum of deviations: 129265854923.31999
[2026-02-23 09:32:47] 2026-02-23 14:31:49,858 | INFO     | mean x: 1771841155.1510935
[2026-02-23 09:32:47] 2026-02-23 14:31:49,858 | INFO     | mean y: 2768456.508946322
[2026-02-23 09:32:47] 2026-02-23 14:31:49,858 | INFO     | intersect: -5800965939.283768
[2026-02-23 09:32:47] 2026-02-23 14:31:49,859 | INFO     | chi2: 2.191629751409159
[2026-02-23 09:32:47] 2026-02-23 14:31:49,859 | INFO     | current chi2=2.191629751409159 (change=-0.0156892291302875 %)
[2026-02-23 09:32:47] 2026-02-23 14:31:49,859 | INFO     | right removable region: 502
[2026-02-23 09:32:47] 2026-02-23 14:31:49,860 | INFO     | sum of square deviations: 40651913859.0235
[2026-02-23 09:32:47] 2026-02-23 14:31:49,920 | INFO     | sum of deviations: -58773708627.63776
[2026-02-23 09:32:47] 2026-02-23 14:31:49,920 | INFO     | mean x: 1771841612.6535432
[2026-02-23 09:32:47] 2026-02-23 14:31:49,921 | INFO     | mean y: 2774000.3543307087
[2026-02-23 09:32:47] 2026-02-23 14:31:49,921 | INFO     | intersect: 2564466496.249151
[2026-02-23 09:32:47] 2026-02-23 14:31:49,922 | INFO     | chi2: 1.7891467453785694
[2026-02-23 09:32:47] 2026-02-23 14:31:49,922 | INFO     | current chi2=1.7891467453785694 (change=52.12963974131979 %)
[2026-02-23 09:32:47] 2026-02-23 14:31:49,922 | INFO     | sum of square deviations: 39463067819.95195
[2026-02-23 09:32:47] 2026-02-23 14:31:49,929 | INFO     | sum of deviations: -75390729518.27037
[2026-02-23 09:32:47] 2026-02-23 14:31:49,930 | INFO     | mean x: 1771841765.1729622
[2026-02-23 09:32:47] 2026-02-23 14:31:49,930 | INFO     | mean y: 2776128.9801192842
[2026-02-23 09:32:47] 2026-02-23 14:31:49,930 | INFO     | intersect: 3387724402.0536385
[2026-02-23 09:32:47] 2026-02-23 14:31:49,931 | INFO     | chi2: 1.751976012709691
[2026-02-23 09:32:47] 2026-02-23 14:31:49,931 | INFO     | current chi2=1.751976012709691 (change=2.0775675759907184 %)
[2026-02-23 09:32:47] 2026-02-23 14:31:49,931 | INFO     | left removable region: 20
[2026-02-23 09:32:47] 2026-02-23 14:31:49,936 | INFO     | sum of square deviations: 34723935351.18891
[2026-02-23 09:32:47] 2026-02-23 14:31:49,942 | INFO     | sum of deviations: 33063245452.684643
[2026-02-23 09:32:47] 2026-02-23 14:31:49,942 | INFO     | mean x: 1771841734.719917
[2026-02-23 09:32:47] 2026-02-23 14:31:49,942 | INFO     | mean y: 2780695.1161825727
[2026-02-23 09:32:47] 2026-02-23 14:31:49,942 | INFO     | intersect: -1684321805.964512
[2026-02-23 09:32:47] 2026-02-23 14:31:49,943 | INFO     | chi2: 0.07705666235057894
[2026-02-23 09:32:47] 2026-02-23 14:31:49,943 | INFO     | current memory leak: 0.95 B/s (using 482 data points, chi2=0.08)
[2026-02-23 09:32:47] 2026-02-23 14:31:49,944 | INFO     | could have reported an average CPU frequency of 2599 MHz (21 samples)
[2026-02-23 09:32:47] 2026-02-23 14:31:49,945 | INFO     | ..............................
[2026-02-23 09:32:47] 2026-02-23 14:31:49,945 | INFO     | . Timing measurements:
[2026-02-23 09:32:47] 2026-02-23 14:31:49,945 | INFO     | . get job = 0 s
[2026-02-23 09:32:47] 2026-02-23 14:31:49,945 | INFO     | . initial setup = 4 s
[2026-02-23 09:32:47] 2026-02-23 14:31:49,945 | INFO     | . payload setup = 29 s
[2026-02-23 09:32:47] 2026-02-23 14:31:49,945 | INFO     | . stage-in = 0 s
[2026-02-23 09:32:47] 2026-02-23 14:31:49,945 | INFO     | . payload execution = 31271 s
[2026-02-23 09:32:47] 2026-02-23 14:31:49,945 | INFO     | . stage-out = 8 s
[2026-02-23 09:32:47] 2026-02-23 14:31:49,945 | INFO     | . log creation = 0 s
[2026-02-23 09:32:47] 2026-02-23 14:31:49,946 | INFO     | ..............................
[2026-02-23 09:32:47] 2026-02-23 14:31:50,392 | INFO     | time since job start (31333s) is within the limit (349056.0s)
[2026-02-23 09:32:47] 2026-02-23 14:31:50,647 | INFO     | 
[2026-02-23 09:32:47] 2026-02-23 14:31:50,647 | INFO     | job summary report
[2026-02-23 09:32:47] 2026-02-23 14:31:50,647 | INFO     | --------------------------------------------------
[2026-02-23 09:32:47] 2026-02-23 14:31:50,647 | INFO     | PanDA job id: 7017520135
[2026-02-23 09:32:47] 2026-02-23 14:31:50,647 | INFO     | task id: 48431096
[2026-02-23 09:32:47] 2026-02-23 14:31:50,647 | INFO     | errors: (none)
[2026-02-23 09:32:47] 2026-02-23 14:31:50,647 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-23 09:32:47] 2026-02-23 14:31:50,647 | INFO     | pilot state: finished 
[2026-02-23 09:32:47] 2026-02-23 14:31:50,648 | INFO     | transexitcode: 0
[2026-02-23 09:32:47] 2026-02-23 14:31:50,648 | INFO     | exeerrorcode: 0
[2026-02-23 09:32:47] 2026-02-23 14:31:50,648 | INFO     | exeerrordiag: 
[2026-02-23 09:32:47] 2026-02-23 14:31:50,648 | INFO     | exitcode: 0
[2026-02-23 09:32:47] 2026-02-23 14:31:50,648 | INFO     | exitmsg: OK
[2026-02-23 09:32:47] 2026-02-23 14:31:50,648 | INFO     | cpuconsumptiontime: 72179 s
[2026-02-23 09:32:47] 2026-02-23 14:31:50,648 | INFO     | nevents: 400
[2026-02-23 09:32:47] 2026-02-23 14:31:50,648 | INFO     | neventsw: 0
[2026-02-23 09:32:47] 2026-02-23 14:31:50,648 | INFO     | pid: 4144997
[2026-02-23 09:32:47] 2026-02-23 14:31:50,648 | INFO     | pgrp: 4144997
[2026-02-23 09:32:47] 2026-02-23 14:31:50,649 | INFO     | corecount: 12
[2026-02-23 09:32:47] 2026-02-23 14:31:50,649 | INFO     | event service: False
[2026-02-23 09:32:47] 2026-02-23 14:31:50,649 | INFO     | sizes: {0: 2281731, 1: 2282132, 2: 2282220, 13: 2282220, 31306: 2320349, 31307: 2320348, 31315: 2329530, 31317: 2329586, 31320: 2329780}
[2026-02-23 09:32:47] 2026-02-23 14:31:50,649 | INFO     | --------------------------------------------------
[2026-02-23 09:32:47] 2026-02-23 14:31:50,649 | INFO     | 
[2026-02-23 09:32:47] 2026-02-23 14:31:50,649 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-23 09:32:47] 2026-02-23 14:31:50,672 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-23 09:32:47] 2026-02-23 14:31:50,672 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-23 09:32:47] 2026-02-23 14:31:50,672 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-23 09:32:47] 2026-02-23 14:31:50,672 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-23 09:32:47] 2026-02-23 14:31:50,672 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-23 09:32:47] 2026-02-23 14:31:50,673 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-23 09:32:47] 2026-02-23 14:31:50,673 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-23 09:32:47] 2026-02-23 14:31:50,673 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-23 09:32:47] 2026-02-23 14:31:50,673 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-23 09:32:47] 2026-02-23 14:31:50,673 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-23 09:32:47] 2026-02-23 14:31:50,673 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-23 09:32:47] 2026-02-23 14:31:50,673 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-23 09:32:47] 2026-02-23 14:31:50,673 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-23 09:32:47] 2026-02-23 14:31:50,673 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-23 09:32:47] 2026-02-23 14:31:50,673 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-23 09:32:47] 2026-02-23 14:31:50,674 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-23 09:32:47] 2026-02-23 14:31:50,674 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-23 09:32:47] 2026-02-23 14:31:50,674 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-23 09:32:47] 2026-02-23 14:31:50,674 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-23 09:32:47] 2026-02-23 14:31:50,674 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-23 09:32:47] 2026-02-23 14:31:50,674 | INFO     | job 7017520135 has completed (purged errors)
[2026-02-23 09:32:47] 2026-02-23 14:31:50,674 | INFO     | overall cleanup function is called
[2026-02-23 09:32:47] 2026-02-23 14:31:51,686 | INFO     | --- collectZombieJob: --- 10, [4144997]
[2026-02-23 09:32:47] 2026-02-23 14:31:51,686 | INFO     | zombie collector waiting for pid 4144997
[2026-02-23 09:32:47] 2026-02-23 14:31:51,686 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-23 09:32:47] 2026-02-23 14:31:51,686 | INFO     | collected zombie processes
[2026-02-23 09:32:47] 2026-02-23 14:31:51,686 | INFO     | will attempt to kill all subprocesses of pid=4144997
[2026-02-23 09:32:47] 2026-02-23 14:31:52,768 | INFO     | process IDs to be killed: [4144997] (in reverse order)
[2026-02-23 09:32:47] 2026-02-23 14:31:53,829 | WARNING  | found no corresponding commands to process id(s)
[2026-02-23 09:32:47] 2026-02-23 14:31:53,835 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-23 09:32:47] 2026-02-23 14:31:53,953 | INFO     | did not find any defunct processes belonging to 4144997
[2026-02-23 09:32:47] 2026-02-23 14:31:54,001 | INFO     | did not find any defunct processes belonging to 4144997
[2026-02-23 09:32:47] 2026-02-23 14:31:54,043 | INFO     | ready for new job
[2026-02-23 09:32:47] 2026-02-23 14:31:54,043 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-23 09:32:47] 2026-02-23 14:31:54,047 | INFO     | **************************************
[2026-02-23 09:32:47] 2026-02-23 14:31:54,047 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-23 09:32:47] 2026-02-23 14:31:54,047 | INFO     | **************************************
[2026-02-23 09:32:47] 2026-02-23 14:31:54,047 | INFO     | 
[2026-02-23 09:32:47] 2026-02-23 14:31:54,049 | INFO     | architecture information:
[2026-02-23 09:32:47] 2026-02-23 14:31:54,087 | INFO     | executing command: cat /etc/os-release
[2026-02-23 09:32:47] 2026-02-23 14:31:54,248 | INFO     | cat /etc/os-release:
[2026-02-23 09:32:47] NAME="CentOS Linux"
[2026-02-23 09:32:47] VERSION="7 (Core)"
[2026-02-23 09:32:47] ID="centos"
[2026-02-23 09:32:47] ID_LIKE="rhel fedora"
[2026-02-23 09:32:47] VERSION_ID="7"
[2026-02-23 09:32:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-23 09:32:47] ANSI_COLOR="0;31"
[2026-02-23 09:32:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-23 09:32:47] HOME_URL="https://www.centos.org/"
[2026-02-23 09:32:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-23 09:32:47] 
[2026-02-23 09:32:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-23 09:32:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-23 09:32:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-23 09:32:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-23 09:32:47] 
[2026-02-23 09:32:47] 2026-02-23 14:31:54,248 | INFO     | **************************************
[2026-02-23 09:32:47] 2026-02-23 14:31:54,752 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-23 09:32:47] 2026-02-23 14:31:55,014 | INFO     | sufficient remaining disk space (74078748672 B)
[2026-02-23 09:32:47] 2026-02-23 14:31:55,014 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-23 09:32:47] 2026-02-23 14:31:55,014 | INFO     | current server update state: UPDATING_FINAL
[2026-02-23 09:32:47] 2026-02-23 14:31:55,015 | INFO     | update_server=False
[2026-02-23 09:32:47] 2026-02-23 14:31:55,015 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-23 09:32:47] 2026-02-23 14:31:55,023 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-23 09:32:47] 2026-02-23 14:31:55,023 | INFO     | aborting loop
[2026-02-23 09:32:47] 2026-02-23 14:31:55,668 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-23 09:32:47] 2026-02-23 14:31:55,820 | INFO     | all payload control threads have been joined
[2026-02-23 09:32:47] 2026-02-23 14:31:55,820 | INFO     | all job control threads have been joined
[2026-02-23 09:32:47] 2026-02-23 14:31:56,021 | INFO     | [job] retrieve thread has finished
[2026-02-23 09:32:47] 2026-02-23 14:31:56,044 | INFO     | [job] job monitor thread has finished
[2026-02-23 09:32:47] 2026-02-23 14:31:56,073 | INFO     | all data control threads have been joined
[2026-02-23 09:32:47] 2026-02-23 14:31:56,234 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-23 09:32:47] 2026-02-23 14:31:56,352 | INFO     | [payload] validate_post thread has finished
[2026-02-23 09:32:47] 2026-02-23 14:31:56,490 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-23 09:32:47] 2026-02-23 14:31:56,562 | INFO     | [payload] failed_post thread has finished
[2026-02-23 09:32:47] 2026-02-23 14:31:56,661 | INFO     | [job] create_data_payload thread has finished
[2026-02-23 09:32:47] 2026-02-23 14:31:56,668 | INFO     | [job] validate thread has finished
[2026-02-23 09:32:47] 2026-02-23 14:31:56,688 | INFO     | [job] queue monitor thread has finished
[2026-02-23 09:32:47] 2026-02-23 14:31:56,826 | INFO     | [payload] control thread has finished
[2026-02-23 09:32:47] 2026-02-23 14:31:56,840 | INFO     | [job] control thread has finished
[2026-02-23 09:32:47] 2026-02-23 14:31:57,090 | INFO     | [data] control thread has finished
[2026-02-23 09:32:47] 2026-02-23 14:31:57,227 | INFO     | [data] copytool_in thread has finished
[2026-02-23 09:32:47] 2026-02-23 14:31:57,389 | INFO     | [payload] execute_payloads thread has finished
[2026-02-23 09:32:47] 2026-02-23 14:31:57,436 | INFO     | [payload] validate_pre thread has finished
[2026-02-23 09:32:47] 2026-02-23 14:31:57,694 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-23 09:32:47] 2026-02-23 14:31:58,241 | INFO     | [data] copytool_out thread has finished
[2026-02-23 09:32:47] 2026-02-23 14:32:01,705 | INFO     | [data] queue_monitor thread has finished
[2026-02-23 09:32:47] 2026-02-23 14:32:24,976 | INFO     | PID=4140475 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-23 09:32:47] 2026-02-23 14:32:24,977 | INFO     | .. there are 35 such processes running
[2026-02-23 09:32:47] 2026-02-23 14:32:24,978 | INFO     | found 0 job(s) in 20 queues
[2026-02-23 09:32:47] 2026-02-23 14:32:24,978 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-23 09:32:47] 2026-02-23 14:32:24,978 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-23 09:32:47] 2026-02-23 14:32:39,117 | INFO     | [monitor] cgroup control has ended
[2026-02-23 09:32:47] 2026-02-23 14:32:40,502 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140537817765696)>', '<ExcThread(monitor, started 140537076107008)>']
[2026-02-23 09:32:47] 2026-02-23 14:32:41,087 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-23 09:32:47] 2026-02-23 14:32:41,087 | INFO     | [monitor] control thread has ended
[2026-02-23 09:32:47] 2026-02-23 14:32:45,528 | INFO     | all workflow threads have been joined
[2026-02-23 09:32:47] 2026-02-23 14:32:45,528 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-23 09:32:47] 2026-02-23 14:32:45,528 | INFO     | traces error code: 0
[2026-02-23 09:32:47] 2026-02-23 14:32:45,528 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-23 09:32:47] 2026-02-23 14:32:46,640 [wrapper] ==== pilot stdout END ====
[2026-02-23 09:32:47] 2026-02-23 14:32:46,697 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-23 09:32:47] 2026-02-23 14:32:46,756 [wrapper] pilotpid: 4140475
[2026-02-23 09:32:47] 2026-02-23 14:32:46,819 [wrapper] Pilot exit status: 0
[2026-02-23 09:32:47] 2026-02-23 14:32:46,957 [wrapper] pandaids: 7017520135 7017520135
[2026-02-23 09:32:47] 2026-02-23 14:32:47,073 [wrapper] cleanup supervisor_pilot 1454033 4140476
[2026-02-23 09:32:47] 2026-02-23 14:32:47,076 [wrapper] Test setup, not cleaning
[2026-02-23 09:32:47] 2026-02-23 14:32:47,081 [wrapper] apfmon messages muted
[2026-02-23 09:32:47] 2026-02-23 14:32:47,084 [wrapper] ==== wrapper stdout END ====
[2026-02-23 09:32:47] 2026-02-23 14:32:47,088 [wrapper] ==== wrapper stderr END ====
[2026-02-23 09:33:07]  *** Error codes and diagnostics ***
[2026-02-23 09:33:07]     "exeErrorCode": 0,
[2026-02-23 09:33:07]     "exeErrorDiag": "",
[2026-02-23 09:33:07]     "pilotErrorCode": 0,
[2026-02-23 09:33:07]     "pilotErrorDiag": "",
[2026-02-23 09:33:07]  *** Listing of results directory ***
[2026-02-23 09:33:07] total 1619880
[2026-02-23 09:33:07] drwx------. 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-02-23 09:33:07] -rw-r--r--. 1 boincer umatlas    584627 Feb 15 03:47 pilot3.tar.gz
[2026-02-23 09:33:07] -rwx------. 1 boincer umatlas     36322 Feb 15 03:50 runpilot2-wrapper.sh
[2026-02-23 09:33:07] -rw-r--r--. 1 boincer umatlas      5111 Feb 15 03:54 queuedata.json
[2026-02-23 09:33:07] -rw-r--r--. 1 boincer umatlas       100 Feb 22 14:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-23 09:33:07] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 22 14:05 run_atlas
[2026-02-23 09:33:07] -rw-r--r--. 1 boincer umatlas       105 Feb 22 14:05 job.xml
[2026-02-23 09:33:07] -rw-r--r--. 3 boincer umatlas 683577487 Feb 22 14:05 EVNT.48431094._000397.pool.root.1
[2026-02-23 09:33:07] -rw-r--r--. 3 boincer umatlas 683577487 Feb 22 14:05 ATLAS.root_0
[2026-02-23 09:33:07] -rw-r--r--. 2 boincer umatlas     15845 Feb 22 14:05 start_atlas.sh
[2026-02-23 09:33:07] drwxrwx--x. 2 boincer umatlas      4096 Feb 22 14:05 shared
[2026-02-23 09:33:07] -rw-r--r--. 2 boincer umatlas    597968 Feb 22 14:05 input.tar.gz
[2026-02-23 09:33:07] -rw-r--r--. 1 boincer umatlas         0 Feb 22 14:05 boinc_lockfile
[2026-02-23 09:33:07] -rw-r--r--. 1 boincer umatlas      2556 Feb 23 00:48 pandaJob.out
[2026-02-23 09:33:07] -rw-------. 1 boincer umatlas        57 Feb 23 00:48 setup.sh.local
[2026-02-23 09:33:07] -rw-------. 1 boincer umatlas    998264 Feb 23 00:49 agis_schedconf.cvmfs.json
[2026-02-23 09:33:07] -rw-------. 1 boincer umatlas       440 Feb 23 00:49 workernode_map.json
[2026-02-23 09:33:07] -rw-r--r--. 1 boincer umatlas      6661 Feb 23 09:27 init_data.xml
[2026-02-23 09:33:07] -rw-------. 1 boincer umatlas 279215426 Feb 23 09:30 HITS.48431096._048728.pool.root.1
[2026-02-23 09:33:07] -rw-r--r--. 1 boincer umatlas       532 Feb 23 09:30 boinc_task_state.xml
[2026-02-23 09:33:07] -rw-------. 1 boincer umatlas      1042 Feb 23 09:31 memory_monitor_summary.json
[2026-02-23 09:33:07] -rw-------. 1 boincer umatlas   1513015 Feb 23 09:31 agis_ddmendpoints.agis.ALL.json
[2026-02-23 09:33:07] -rw-------. 1 boincer umatlas    710488 Feb 23 09:31 log.48431096._048728.job.log.tgz.1
[2026-02-23 09:33:07] -rw-------. 1 boincer umatlas        96 Feb 23 09:31 pilot_heartbeat.json
[2026-02-23 09:33:07] -rw-------. 1 boincer umatlas      6386 Feb 23 09:31 heartbeat.json
[2026-02-23 09:33:07] -rw-------. 1 boincer umatlas      4820 Feb 23 09:32 pilotlog.txt
[2026-02-23 09:33:07] -rw-------. 1 boincer umatlas   3512158 Feb 23 09:32 log.48431096._048728.job.log.1
[2026-02-23 09:33:07] -rw-------. 1 boincer umatlas       357 Feb 23 09:32 output.list
[2026-02-23 09:33:07] -rw-r--r--. 1 boincer umatlas       620 Feb 23 09:32 runtime_log
[2026-02-23 09:33:07] -rw-------. 1 boincer umatlas   4239360 Feb 23 09:32 result.tar.gz
[2026-02-23 09:33:07] -rw-r--r--. 1 boincer umatlas      9419 Feb 23 09:32 runtime_log.err
[2026-02-23 09:33:07] -rw-------. 1 boincer umatlas       782 Feb 23 09:32 odONDm80mB9n9Rq4apOajLDm4fhM0noT9bVooX4SDmmfoKDmuT60dn.diag
[2026-02-23 09:33:07] -rw-r--r--. 1 boincer umatlas        29 Feb 23 09:33 wrapper_checkpoint.txt
[2026-02-23 09:33:07] -rw-r--r--. 1 boincer umatlas      8192 Feb 23 09:33 boinc_mmap_file
[2026-02-23 09:33:07] -rw-r--r--. 1 boincer umatlas     23334 Feb 23 09:33 stderr.txt
[2026-02-23 09:33:07] HITS file was successfully produced:
[2026-02-23 09:33:07] -rw-------. 1 boincer umatlas 279215426 Feb 23 09:30 shared/HITS.pool.root.1
[2026-02-23 09:33:07]  *** Contents of shared directory: ***
[2026-02-23 09:33:07] total 944980
[2026-02-23 09:33:07] -rw-r--r--. 3 boincer umatlas 683577487 Feb 22 14:05 ATLAS.root_0
[2026-02-23 09:33:07] -rw-r--r--. 2 boincer umatlas     15845 Feb 22 14:05 start_atlas.sh
[2026-02-23 09:33:07] -rw-r--r--. 2 boincer umatlas    597968 Feb 22 14:05 input.tar.gz
[2026-02-23 09:33:07] -rw-------. 1 boincer umatlas 279215426 Feb 23 09:30 HITS.pool.root.1
[2026-02-23 09:33:07] -rw-------. 1 boincer umatlas   4239360 Feb 23 09:32 result.tar.gz
09:33:09 (4133278): run_atlas exited; CPU time 73435.479376
09:33:09 (4133278): called boinc_finish(0)

</stderr_txt>
]]>

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