Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
13:42:37 (3530121): wrapper (7.7.26015): starting
13:42:37 (3530121): wrapper: running run_atlas (--nthreads 12)
[2026-02-22 13:42:37] Arguments: --nthreads 12
[2026-02-22 13:42:37] Threads: 12
[2026-02-22 13:42:37] Checking for CVMFS
[2026-02-22 13:42:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-22 13:42:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-22 13:42:37] Running cvmfs_config stat atlas.cern.ch
[2026-02-22 13:42:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-22 13:42:38] 2.11.0.0 3504997 0 29056 156523 3 19 4244147 6144000 378 130560 0 54726 99.973 2896 790 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-02-22 13:42:38] CVMFS is ok
[2026-02-22 13:42:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-22 13:42:38] Checking for apptainer binary...
[2026-02-22 13:42:38] apptainer is not installed, using version from CVMFS
[2026-02-22 13:42:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-22 13:42:38] radiat0r
[2026-02-22 13:42:38] apptainer works
[2026-02-22 13:42:38] Set ATHENA_PROC_NUMBER=12
[2026-02-22 13:42:38] Set ATHENA_CORE_NUMBER=12
[2026-02-22 13:42:38] Starting ATLAS job with PandaID=7011626297
[2026-02-22 13:42:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-22 14:31:02]  *** The last 200 lines of the pilot log: ***
[2026-02-22 14:31:02]  surl=/var/lib/boinc/slots/21/PanDA_Pilot-7011626297/log.48442098._010226.job.log.tgz.1
[2026-02-22 14:31:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/ae/log.48442098._010226.job.log.tgz.1
[2026-02-22 14:31:02]  workdir=None
[2026-02-22 14:31:02] ]
[2026-02-22 14:31:02] 2026-02-22 14:29:51,848 | INFO     | transferring file log.48442098._010226.job.log.tgz.1 from /var/lib/boinc/slots/21/PanDA_Pilot-7011626297/log.48442098._010226.job.log.tgz.1 to /var/lib/boinc/slots
[2026-02-22 14:31:02] 2026-02-22 14:29:51,848 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/21/PanDA_Pilot-7011626297/log.48442098._010226.job.log.tgz.1 /var/lib/boinc/slots/21/log.48442098._010226.j
[2026-02-22 14:31:02] 2026-02-22 14:29:51,868 | INFO     | adding to output.list: log.48442098._010226.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/ae/log.48442098._010226.job.log.tg
[2026-02-22 14:31:02] 2026-02-22 14:29:51,869 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-22 14:31:02] 2026-02-22 14:29:51,869 | INFO     | summary of transferred files:
[2026-02-22 14:31:02] 2026-02-22 14:29:51,869 | INFO     |  -- lfn=log.48442098._010226.job.log.tgz.1, status_code=0, status=transferred
[2026-02-22 14:31:02] 2026-02-22 14:29:51,869 | INFO     | stage-out finished correctly
[2026-02-22 14:31:02] 2026-02-22 14:29:52,060 | INFO     | time since job start (2820s) is within the limit (349056.0s)
[2026-02-22 14:31:02] 2026-02-22 14:29:53,055 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-22 14:31:02] 2026-02-22 14:29:53,653 | WARNING  | process 3587512 can no longer be monitored (due to stat problems) - aborting
[2026-02-22 14:31:02] 2026-02-22 14:29:53,653 | INFO     | using path: /var/lib/boinc/slots/21/PanDA_Pilot-7011626297/memory_monitor_summary.json (trf name=prmon)
[2026-02-22 14:31:02] 2026-02-22 14:29:53,653 | INFO     | using path: /var/lib/boinc/slots/21/PanDA_Pilot-7011626297/memory_monitor_summary.json (trf name=prmon)
[2026-02-22 14:31:02] 2026-02-22 14:29:53,654 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-22 14:31:02] 2026-02-22 14:29:53,654 | WARNING  | maxPSS not found in memory monitor output
[2026-02-22 14:31:02] 2026-02-22 14:29:53,654 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3998938 B
[2026-02-22 14:31:02] 2026-02-22 14:29:53,654 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16072 B
[2026-02-22 14:31:02] 2026-02-22 14:29:53,654 | INFO     | executing command: df -mP /var/lib/boinc/slots/21
[2026-02-22 14:31:02] 2026-02-22 14:29:53,677 | INFO     | sufficient remaining disk space (1711315877888 B)
[2026-02-22 14:31:02] 2026-02-22 14:29:53,678 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-02-22 14:31:02] 2026-02-22 14:29:53,678 | INFO     | size of work directory /var/lib/boinc/slots/21/PanDA_Pilot-7011626297: 4285608 B (within 5033164800 B limit)
[2026-02-22 14:31:02] 2026-02-22 14:29:53,678 | INFO     | pfn file=/var/lib/boinc/slots/21/PanDA_Pilot-7011626297/HITS.48442098._010226.pool.root.1 does not exist (skip from workdir size calculation)
[2026-02-22 14:31:02] 2026-02-22 14:29:53,678 | INFO     | total size of present files: 0 B (workdir size: 4285608 B)
[2026-02-22 14:31:02] 2026-02-22 14:29:53,678 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/21/PanDA_Pilot-7011626297/HITS.48442098._010226.pool.root.1 since it does not exist
[2026-02-22 14:31:02] 2026-02-22 14:29:54,071 | INFO     | time since job start (2822s) is within the limit (349056.0s)
[2026-02-22 14:31:02] 2026-02-22 14:29:54,122 | INFO     | number of running child processes to parent process 3587512: 1
[2026-02-22 14:31:02] 2026-02-22 14:29:54,122 | INFO     | maximum number of monitored processes: 6
[2026-02-22 14:31:02] 2026-02-22 14:29:54,431 | INFO     | job 7011626297 has state=finished
[2026-02-22 14:31:02] 2026-02-22 14:29:54,431 | INFO     | preparing for final server update for job 7011626297 in state='finished'
[2026-02-22 14:31:02] 2026-02-22 14:29:54,432 | INFO     | reading metadata from: /var/lib/boinc/slots/21/PanDA_Pilot-7011626297/jobReport.json
[2026-02-22 14:31:02] 2026-02-22 14:29:54,435 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/21/workernode_map.json
[2026-02-22 14:31:02] 2026-02-22 14:29:54,435 | INFO     | this job has now completed (state=finished)
[2026-02-22 14:31:02] 2026-02-22 14:29:54,435 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-22 14:31:02] 2026-02-22 14:29:54,435 | INFO     | log transfer has been attempted: DONE
[2026-02-22 14:31:02] 2026-02-22 14:29:54,435 | INFO     | job 7011626297 has finished - writing final server update
[2026-02-22 14:31:02] 2026-02-22 14:29:54,436 | INFO     | total number of processed events: 400 (read)
[2026-02-22 14:31:02] 2026-02-22 14:29:54,519 | INFO     | using path: /var/lib/boinc/slots/21/PanDA_Pilot-7011626297/memory_monitor_summary.json (trf name=prmon)
[2026-02-22 14:31:02] 2026-02-22 14:29:54,522 | INFO     | extracted standard info from prmon json
[2026-02-22 14:31:02] 2026-02-22 14:29:54,522 | INFO     | extracted standard memory fields from prmon json
[2026-02-22 14:31:02] 2026-02-22 14:29:54,522 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-22 14:31:02] 2026-02-22 14:29:54,523 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-22 14:31:02] 2026-02-22 14:29:54,523 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-22 14:31:02] 2026-02-22 14:29:54,524 | INFO     | fitting pss+swap vs Time
[2026-02-22 14:31:02] 2026-02-22 14:29:54,524 | INFO     | sum of square deviations: 18381740.0
[2026-02-22 14:31:02] 2026-02-22 14:29:54,524 | INFO     | sum of deviations: -20439331.000000015
[2026-02-22 14:31:02] 2026-02-22 14:29:54,524 | INFO     | mean x: 1771769257.0
[2026-02-22 14:31:02] 2026-02-22 14:29:54,524 | INFO     | mean y: 2685529.230769231
[2026-02-22 14:31:02] 2026-02-22 14:29:54,525 | INFO     | intersect: 1972780759.5760517
[2026-02-22 14:31:02] 2026-02-22 14:29:54,525 | INFO     | chi2: 0.0011873938925375709
[2026-02-22 14:31:02] 2026-02-22 14:29:54,525 | INFO     | current memory leak: -1.11 B/s (using 39 data points, chi2=0.00)
[2026-02-22 14:31:02] 2026-02-22 14:29:54,525 | INFO     | could have reported an average CPU frequency of 1974 MHz (5 samples)
[2026-02-22 14:31:02] 2026-02-22 14:29:54,525 | INFO     | ..............................
[2026-02-22 14:31:02] 2026-02-22 14:29:54,525 | INFO     | . Timing measurements:
[2026-02-22 14:31:02] 2026-02-22 14:29:54,525 | INFO     | . get job = 0 s
[2026-02-22 14:31:02] 2026-02-22 14:29:54,525 | INFO     | . initial setup = 5 s
[2026-02-22 14:31:02] 2026-02-22 14:29:54,525 | INFO     | . payload setup = 5 s
[2026-02-22 14:31:02] 2026-02-22 14:29:54,526 | INFO     | . stage-in = 0 s
[2026-02-22 14:31:02] 2026-02-22 14:29:54,526 | INFO     | . payload execution = 2798 s
[2026-02-22 14:31:02] 2026-02-22 14:29:54,526 | INFO     | . stage-out = 0 s
[2026-02-22 14:31:02] 2026-02-22 14:29:54,526 | INFO     | . log creation = 0 s
[2026-02-22 14:31:02] 2026-02-22 14:29:54,526 | INFO     | ..............................
[2026-02-22 14:31:02] 2026-02-22 14:29:54,586 | INFO     | 
[2026-02-22 14:31:02] 2026-02-22 14:29:54,586 | INFO     | job summary report
[2026-02-22 14:31:02] 2026-02-22 14:29:54,586 | INFO     | --------------------------------------------------
[2026-02-22 14:31:02] 2026-02-22 14:29:54,586 | INFO     | PanDA job id: 7011626297
[2026-02-22 14:31:02] 2026-02-22 14:29:54,586 | INFO     | task id: 48442098
[2026-02-22 14:31:02] 2026-02-22 14:29:54,586 | INFO     | errors: (none)
[2026-02-22 14:31:02] 2026-02-22 14:29:54,586 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-22 14:31:02] 2026-02-22 14:29:54,586 | INFO     | pilot state: finished 
[2026-02-22 14:31:02] 2026-02-22 14:29:54,586 | INFO     | transexitcode: 0
[2026-02-22 14:31:02] 2026-02-22 14:29:54,586 | INFO     | exeerrorcode: 0
[2026-02-22 14:31:02] 2026-02-22 14:29:54,587 | INFO     | exeerrordiag: 
[2026-02-22 14:31:02] 2026-02-22 14:29:54,587 | INFO     | exitcode: 0
[2026-02-22 14:31:02] 2026-02-22 14:29:54,587 | INFO     | exitmsg: OK
[2026-02-22 14:31:02] 2026-02-22 14:29:54,587 | INFO     | cpuconsumptiontime: 31204 s
[2026-02-22 14:31:02] 2026-02-22 14:29:54,587 | INFO     | nevents: 400
[2026-02-22 14:31:02] 2026-02-22 14:29:54,587 | INFO     | neventsw: 0
[2026-02-22 14:31:02] 2026-02-22 14:29:54,587 | INFO     | pid: 3587512
[2026-02-22 14:31:02] 2026-02-22 14:29:54,587 | INFO     | pgrp: 3587512
[2026-02-22 14:31:02] 2026-02-22 14:29:54,587 | INFO     | corecount: 12
[2026-02-22 14:31:02] 2026-02-22 14:29:54,587 | INFO     | event service: False
[2026-02-22 14:31:02] 2026-02-22 14:29:54,587 | INFO     | sizes: {0: 2282224, 11: 2282224, 2806: 2307700, 2807: 2307699, 2808: 2316755, 2810: 2316811, 2811: 2317193}
[2026-02-22 14:31:02] 2026-02-22 14:29:54,587 | INFO     | --------------------------------------------------
[2026-02-22 14:31:02] 2026-02-22 14:29:54,587 | INFO     | 
[2026-02-22 14:31:02] 2026-02-22 14:29:54,588 | INFO     | executing command: ls -lF /var/lib/boinc/slots/21
[2026-02-22 14:31:02] 2026-02-22 14:29:54,608 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-22 14:31:02] 2026-02-22 14:29:54,608 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-22 14:31:02] 2026-02-22 14:29:54,608 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-22 14:31:02] 2026-02-22 14:29:54,608 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-22 14:31:02] 2026-02-22 14:29:54,608 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-22 14:31:02] 2026-02-22 14:29:54,608 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-22 14:31:02] 2026-02-22 14:29:54,608 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-22 14:31:02] 2026-02-22 14:29:54,608 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-22 14:31:02] 2026-02-22 14:29:54,608 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-22 14:31:02] 2026-02-22 14:29:54,608 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-22 14:31:02] 2026-02-22 14:29:54,608 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-22 14:31:02] 2026-02-22 14:29:54,609 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-22 14:31:02] 2026-02-22 14:29:54,609 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-22 14:31:02] 2026-02-22 14:29:54,609 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-22 14:31:02] 2026-02-22 14:29:54,609 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-22 14:31:02] 2026-02-22 14:29:54,609 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-22 14:31:02] 2026-02-22 14:29:54,609 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-22 14:31:02] 2026-02-22 14:29:54,609 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-22 14:31:02] 2026-02-22 14:29:54,609 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-22 14:31:02] 2026-02-22 14:29:54,609 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-22 14:31:02] 2026-02-22 14:29:54,609 | INFO     | job 7011626297 has completed (purged errors)
[2026-02-22 14:31:02] 2026-02-22 14:29:54,609 | INFO     | overall cleanup function is called
[2026-02-22 14:31:02] 2026-02-22 14:29:55,617 | INFO     | --- collectZombieJob: --- 10, [3587512]
[2026-02-22 14:31:02] 2026-02-22 14:29:55,618 | INFO     | zombie collector waiting for pid 3587512
[2026-02-22 14:31:02] 2026-02-22 14:29:55,618 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-22 14:31:02] 2026-02-22 14:29:55,618 | INFO     | collected zombie processes
[2026-02-22 14:31:02] 2026-02-22 14:29:55,618 | INFO     | will attempt to kill all subprocesses of pid=3587512
[2026-02-22 14:31:02] 2026-02-22 14:29:56,117 | INFO     | process IDs to be killed: [3587512] (in reverse order)
[2026-02-22 14:31:02] 2026-02-22 14:29:56,290 | WARNING  | found no corresponding commands to process id(s)
[2026-02-22 14:31:02] 2026-02-22 14:29:56,290 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-22 14:31:02] 2026-02-22 14:29:56,308 | INFO     | did not find any defunct processes belonging to 3587512
[2026-02-22 14:31:02] 2026-02-22 14:29:56,322 | INFO     | did not find any defunct processes belonging to 3587512
[2026-02-22 14:31:02] 2026-02-22 14:29:56,322 | INFO     | ready for new job
[2026-02-22 14:31:02] 2026-02-22 14:29:56,323 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-22 14:31:02] 2026-02-22 14:29:56,324 | INFO     | **************************************
[2026-02-22 14:31:02] 2026-02-22 14:29:56,324 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-22 14:31:02] 2026-02-22 14:29:56,324 | INFO     | **************************************
[2026-02-22 14:31:02] 2026-02-22 14:29:56,324 | INFO     | 
[2026-02-22 14:31:02] 2026-02-22 14:29:56,360 | INFO     | architecture information:
[2026-02-22 14:31:02] 2026-02-22 14:29:56,360 | INFO     | executing command: cat /etc/os-release
[2026-02-22 14:31:02] 2026-02-22 14:29:56,380 | INFO     | cat /etc/os-release:
[2026-02-22 14:31:02] NAME="CentOS Linux"
[2026-02-22 14:31:02] VERSION="7 (Core)"
[2026-02-22 14:31:02] ID="centos"
[2026-02-22 14:31:02] ID_LIKE="rhel fedora"
[2026-02-22 14:31:02] VERSION_ID="7"
[2026-02-22 14:31:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-22 14:31:02] ANSI_COLOR="0;31"
[2026-02-22 14:31:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-22 14:31:02] HOME_URL="https://www.centos.org/"
[2026-02-22 14:31:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-22 14:31:02] 
[2026-02-22 14:31:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-22 14:31:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-22 14:31:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-22 14:31:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-22 14:31:02] 
[2026-02-22 14:31:02] 2026-02-22 14:29:56,380 | INFO     | **************************************
[2026-02-22 14:31:02] 2026-02-22 14:29:56,883 | INFO     | executing command: df -mP /var/lib/boinc/slots/21
[2026-02-22 14:31:02] 2026-02-22 14:29:56,904 | INFO     | sufficient remaining disk space (1711320072192 B)
[2026-02-22 14:31:02] 2026-02-22 14:29:56,904 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-22 14:31:02] 2026-02-22 14:29:56,904 | INFO     | current server update state: UPDATING_FINAL
[2026-02-22 14:31:02] 2026-02-22 14:29:56,905 | INFO     | update_server=False
[2026-02-22 14:31:02] 2026-02-22 14:29:56,905 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-22 14:31:02] 2026-02-22 14:29:57,085 | INFO     | all payload control threads have been joined
[2026-02-22 14:31:02] 2026-02-22 14:29:57,206 | INFO     | all data control threads have been joined
[2026-02-22 14:31:02] 2026-02-22 14:29:57,277 | INFO     | all job control threads have been joined
[2026-02-22 14:31:02] 2026-02-22 14:29:57,435 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-22 14:31:02] 2026-02-22 14:29:57,631 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-22 14:31:02] 2026-02-22 14:29:57,632 | INFO     | aborting loop
[2026-02-22 14:31:02] 2026-02-22 14:29:57,910 | INFO     | [job] retrieve thread has finished
[2026-02-22 14:31:02] 2026-02-22 14:29:58,077 | INFO     | [payload] validate_post thread has finished
[2026-02-22 14:31:02] 2026-02-22 14:29:58,088 | INFO     | [payload] control thread has finished
[2026-02-22 14:31:02] 2026-02-22 14:29:58,208 | INFO     | [data] control thread has finished
[2026-02-22 14:31:02] 2026-02-22 14:29:58,282 | INFO     | [job] control thread has finished
[2026-02-22 14:31:02] 2026-02-22 14:29:58,314 | INFO     | [job] validate thread has finished
[2026-02-22 14:31:02] 2026-02-22 14:29:58,477 | INFO     | [job] create_data_payload thread has finished
[2026-02-22 14:31:02] 2026-02-22 14:29:58,546 | INFO     | [payload] execute_payloads thread has finished
[2026-02-22 14:31:02] 2026-02-22 14:29:58,637 | INFO     | [job] job monitor thread has finished
[2026-02-22 14:31:02] 2026-02-22 14:29:58,644 | INFO     | [payload] validate_pre thread has finished
[2026-02-22 14:31:02] 2026-02-22 14:29:58,924 | INFO     | [data] copytool_in thread has finished
[2026-02-22 14:31:02] 2026-02-22 14:29:59,038 | INFO     | [payload] failed_post thread has finished
[2026-02-22 14:31:02] 2026-02-22 14:29:59,123 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-22 14:31:02] 2026-02-22 14:29:59,441 | INFO     | [data] copytool_out thread has finished
[2026-02-22 14:31:02] 2026-02-22 14:29:59,597 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-22 14:31:02] 2026-02-22 14:30:00,602 | INFO     | [job] queue monitor thread has finished
[2026-02-22 14:31:02] 2026-02-22 14:30:03,129 | INFO     | [data] queue_monitor thread has finished
[2026-02-22 14:31:02] 2026-02-22 14:30:07,427 | INFO     | job.realtimelogging is not enabled
[2026-02-22 14:31:02] 2026-02-22 14:30:08,432 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-22 14:31:02] 2026-02-22 14:30:27,655 | INFO     | PID=3555228 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-22 14:31:02] 2026-02-22 14:30:27,655 | INFO     | .. there are 8 such processes running
[2026-02-22 14:31:02] 2026-02-22 14:30:27,655 | INFO     | found 0 job(s) in 20 queues
[2026-02-22 14:31:02] 2026-02-22 14:30:27,655 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-22 14:31:02] 2026-02-22 14:30:27,655 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-22 14:31:02] 2026-02-22 14:30:56,180 | INFO     | [monitor] cgroup control has ended
[2026-02-22 14:31:02] 2026-02-22 14:30:57,092 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139708699854656)>', '<ExcThread(monitor, started 139707904161536)>']
[2026-02-22 14:31:02] 2026-02-22 14:30:57,806 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-22 14:31:02] 2026-02-22 14:30:57,806 | INFO     | [monitor] control thread has ended
[2026-02-22 14:31:02] 2026-02-22 14:31:02,118 | INFO     | all workflow threads have been joined
[2026-02-22 14:31:02] 2026-02-22 14:31:02,118 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-22 14:31:02] 2026-02-22 14:31:02,118 | INFO     | traces error code: 0
[2026-02-22 14:31:02] 2026-02-22 14:31:02,119 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-22 14:31:02] 2026-02-22 14:31:02,222 [wrapper] ==== pilot stdout END ====
[2026-02-22 14:31:02] 2026-02-22 14:31:02,226 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-22 14:31:02] 2026-02-22 14:31:02,230 [wrapper] pilotpid: 3555228
[2026-02-22 14:31:02] 2026-02-22 14:31:02,233 [wrapper] Pilot exit status: 0
[2026-02-22 14:31:02] 2026-02-22 14:31:02,242 [wrapper] pandaids: 7011626297
[2026-02-22 14:31:02] 2026-02-22 14:31:02,340 [wrapper] cleanup supervisor_pilot 3695673 3555230
[2026-02-22 14:31:02] 2026-02-22 14:31:02,343 [wrapper] Test setup, not cleaning
[2026-02-22 14:31:02] 2026-02-22 14:31:02,346 [wrapper] apfmon messages muted
[2026-02-22 14:31:02] 2026-02-22 14:31:02,349 [wrapper] ==== wrapper stdout END ====
[2026-02-22 14:31:02] 2026-02-22 14:31:02,353 [wrapper] ==== wrapper stderr END ====
[2026-02-22 14:31:02]  *** Error codes and diagnostics ***
[2026-02-22 14:31:02]     "exeErrorCode": 0,
[2026-02-22 14:31:02]     "exeErrorDiag": "",
[2026-02-22 14:31:02]     "pilotErrorCode": 0,
[2026-02-22 14:31:02]     "pilotErrorDiag": "",
[2026-02-22 14:31:02]  *** Listing of results directory ***
[2026-02-22 14:31:02] total 666364
[2026-02-22 14:31:02] -rw-r--r-- 1 boinc boinc    584627 Feb 15 07:00 pilot3.tar.gz
[2026-02-22 14:31:02] -rwx------ 1 boinc boinc     36322 Feb 15 07:03 runpilot2-wrapper.sh
[2026-02-22 14:31:02] -rw-r--r-- 1 boinc boinc      5111 Feb 15 07:06 queuedata.json
[2026-02-22 14:31:02] -rw-r--r-- 1 boinc boinc       100 Feb 22 13:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-22 14:31:02] -rwxr-xr-x 1 boinc boinc      7986 Feb 22 13:42 run_atlas
[2026-02-22 14:31:02] -rw-r--r-- 1 boinc boinc       105 Feb 22 13:42 job.xml
[2026-02-22 14:31:02] -rw-r--r-- 2 boinc boinc     15845 Feb 22 13:42 start_atlas.sh
[2026-02-22 14:31:02] drwxrwx--x 2 boinc boinc      4096 Feb 22 13:42 shared
[2026-02-22 14:31:02] -rw-r--r-- 2 boinc boinc    597965 Feb 22 13:42 input.tar.gz
[2026-02-22 14:31:02] -rw-r--r-- 1 boinc boinc      9417 Feb 22 13:42 init_data.xml
[2026-02-22 14:31:02] -rw-r--r-- 2 boinc boinc 495731741 Feb 22 13:42 EVNT.48442096._000188.pool.root.1
[2026-02-22 14:31:02] -rw-r--r-- 1 boinc boinc         0 Feb 22 13:42 boinc_setup_complete
[2026-02-22 14:31:02] -rw-r--r-- 1 boinc boinc         0 Feb 22 13:42 boinc_lockfile
[2026-02-22 14:31:02] -rw-r--r-- 1 boinc boinc      2529 Feb 22 13:42 pandaJob.out
[2026-02-22 14:31:02] -rw------- 1 boinc boinc    998148 Feb 22 13:42 agis_schedconf.cvmfs.json
[2026-02-22 14:31:02] -rw------- 1 boinc boinc   1513015 Feb 22 13:42 agis_ddmendpoints.agis.ALL.json
[2026-02-22 14:31:02] -rw------- 1 boinc boinc       421 Feb 22 13:42 workernode_map.json
[2026-02-22 14:31:02] drwx------ 5 boinc boinc      4096 Feb 22 13:42 pilot3
[2026-02-22 14:31:02] -rw------- 1 boinc boinc 181127624 Feb 22 14:29 HITS.48442098._010226.pool.root.1
[2026-02-22 14:31:02] -rw-r--r-- 1 boinc boinc       530 Feb 22 14:29 boinc_task_state.xml
[2026-02-22 14:31:02] -rw------- 1 boinc boinc        95 Feb 22 14:29 pilot_heartbeat.json
[2026-02-22 14:31:02] -rw------- 1 boinc boinc      1024 Feb 22 14:29 memory_monitor_summary.json
[2026-02-22 14:31:02] -rw------- 1 boinc boinc    354488 Feb 22 14:29 log.48442098._010226.job.log.tgz.1
[2026-02-22 14:31:02] -rw------- 1 boinc boinc      6276 Feb 22 14:29 heartbeat.json
[2026-02-22 14:31:02] -rw-r--r-- 1 boinc boinc      8192 Feb 22 14:30 boinc_mmap_file
[2026-02-22 14:31:02] -rw-r--r-- 1 boinc boinc        27 Feb 22 14:30 wrapper_checkpoint.txt
[2026-02-22 14:31:02] -rw------- 1 boinc boinc      4894 Feb 22 14:31 pilotlog.txt
[2026-02-22 14:31:02] -rw------- 1 boinc boinc    427187 Feb 22 14:31 log.48442098._010226.job.log.1
[2026-02-22 14:31:02] -rw------- 1 boinc boinc       357 Feb 22 14:31 output.list
[2026-02-22 14:31:02] -rw-r--r-- 1 boinc boinc       620 Feb 22 14:31 runtime_log
[2026-02-22 14:31:02] -rw------- 1 boinc boinc    798720 Feb 22 14:31 result.tar.gz
[2026-02-22 14:31:02] -rw-r--r-- 1 boinc boinc      8787 Feb 22 14:31 runtime_log.err
[2026-02-22 14:31:02] -rw------- 1 boinc boinc       643 Feb 22 14:31 D42MDmQLlB9n9Rq4apOajLDm4fhM0noT9bVooX4SDmDSoKDmtpDLCo.diag
[2026-02-22 14:31:02] -rw-r--r-- 1 boinc boinc     22290 Feb 22 14:31 stderr.txt
[2026-02-22 14:31:02] HITS file was successfully produced:
[2026-02-22 14:31:02] -rw------- 1 boinc boinc 181127624 Feb 22 14:29 shared/HITS.pool.root.1
[2026-02-22 14:31:02]  *** Contents of shared directory: ***
[2026-02-22 14:31:02] total 662388
[2026-02-22 14:31:02] -rw-r--r-- 2 boinc boinc     15845 Feb 22 13:42 start_atlas.sh
[2026-02-22 14:31:02] -rw-r--r-- 2 boinc boinc    597965 Feb 22 13:42 input.tar.gz
[2026-02-22 14:31:02] -rw-r--r-- 2 boinc boinc 495731741 Feb 22 13:42 ATLAS.root_0
[2026-02-22 14:31:02] -rw------- 1 boinc boinc 181127624 Feb 22 14:29 HITS.pool.root.1
[2026-02-22 14:31:02] -rw------- 1 boinc boinc    798720 Feb 22 14:31 result.tar.gz
14:31:04 (3530121): run_atlas exited; CPU time 31372.898191
14:31:04 (3530121): called boinc_finish(0)

</stderr_txt>
]]>

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