Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:13:36 (9525): wrapper (7.7.26015): starting
20:13:36 (9525): wrapper: running run_atlas (--nthreads 8)
[2026-02-22 20:13:36] Arguments: --nthreads 8
[2026-02-22 20:13:36] Threads: 8
[2026-02-22 20:13:36] Checking for CVMFS
[2026-02-22 20:13:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-22 20:13:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-22 20:13:40] Running cvmfs_config stat atlas.cern.ch
[2026-02-22 20:13:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-22 20:13:41] 2.11.2.0 3780 99179 139480 156531 0 58 14350433 25165824 3500 130560 0 30945586 99.846 20634539 3085 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-22 20:13:41] CVMFS is ok
[2026-02-22 20:13:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-22 20:13:41] Checking for apptainer binary...
[2026-02-22 20:13:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-22 20:13:41] Running /usr/bin/apptainer --version
[2026-02-22 20:13:41] apptainer version 1.3.2-1.el7
[2026-02-22 20:13:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-22 20:14:06] cg-vwn360.simple-grid.lan
[2026-02-22 20:14:06] apptainer works
[2026-02-22 20:14:06] Set ATHENA_PROC_NUMBER=8
[2026-02-22 20:14:06] Set ATHENA_CORE_NUMBER=8
[2026-02-22 20:14:06] Starting ATLAS job with PandaID=7021122131
[2026-02-22 20:14:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-23 02:05:09]  *** The last 200 lines of the pilot log: ***
[2026-02-23 02:05:09] 2026-02-23 01:04:10,451 | INFO     | reading metadata from: /var/lib/boinc/slots/6/PanDA_Pilot-7021122131/jobReport.json
[2026-02-23 02:05:09] 2026-02-23 01:04:10,454 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/6/workernode_map.json
[2026-02-23 02:05:09] 2026-02-23 01:04:10,454 | INFO     | this job has now completed (state=finished)
[2026-02-23 02:05:09] 2026-02-23 01:04:10,454 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-23 02:05:09] 2026-02-23 01:04:10,454 | INFO     | log transfer has been attempted: DONE
[2026-02-23 02:05:09] 2026-02-23 01:04:10,455 | INFO     | job 7021122131 has finished - writing final server update
[2026-02-23 02:05:09] 2026-02-23 01:04:10,455 | INFO     | total number of processed events: 400 (read)
[2026-02-23 02:05:09] 2026-02-23 01:04:10,457 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7021122131/memory_monitor_summary.json (trf name=prmon)
[2026-02-23 02:05:09] 2026-02-23 01:04:10,458 | INFO     | extracted standard info from prmon json
[2026-02-23 02:05:09] 2026-02-23 01:04:10,458 | INFO     | extracted standard memory fields from prmon json
[2026-02-23 02:05:09] 2026-02-23 01:04:10,458 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-23 02:05:09] 2026-02-23 01:04:10,458 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-23 02:05:09] 2026-02-23 01:04:10,458 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-23 02:05:09] 2026-02-23 01:04:10,465 | INFO     | fitting pss+swap vs Time
[2026-02-23 02:05:09] 2026-02-23 01:04:10,466 | INFO     | sum of square deviations: 11657595320.0
[2026-02-23 02:05:09] 2026-02-23 01:04:10,470 | INFO     | sum of deviations: 28692215956.000004
[2026-02-23 02:05:09] 2026-02-23 01:04:10,470 | INFO     | mean x: 1771798420.0
[2026-02-23 02:05:09] 2026-02-23 01:04:10,470 | INFO     | mean y: 2548627.3283582088
[2026-02-23 02:05:09] 2026-02-23 01:04:10,470 | INFO     | intersect: -4358284074.585984
[2026-02-23 02:05:09] 2026-02-23 01:04:10,471 | INFO     | chi2: 4.692220703537807
[2026-02-23 02:05:09] 2026-02-23 01:04:10,471 | INFO     | sum of square deviations: 11143362422.5
[2026-02-23 02:05:09] 2026-02-23 01:04:10,478 | INFO     | sum of deviations: 50883990092.000015
[2026-02-23 02:05:09] 2026-02-23 01:04:10,478 | INFO     | mean x: 1771798267.5
[2026-02-23 02:05:09] 2026-02-23 01:04:10,478 | INFO     | mean y: 2555126.7454545456
[2026-02-23 02:05:09] 2026-02-23 01:04:10,478 | INFO     | intersect: -8088015929.837516
[2026-02-23 02:05:09] 2026-02-23 01:04:10,479 | INFO     | chi2: 3.9444719437560947
[2026-02-23 02:05:09] 2026-02-23 01:04:10,479 | INFO     | current chi2=3.9444719437560947 (change=15.935924736403178 %)
[2026-02-23 02:05:09] 2026-02-23 01:04:10,479 | INFO     | right removable region: 329
[2026-02-23 02:05:09] 2026-02-23 01:04:10,480 | INFO     | sum of square deviations: 11143362422.5
[2026-02-23 02:05:09] 2026-02-23 01:04:10,483 | INFO     | sum of deviations: -75567112594.5
[2026-02-23 02:05:09] 2026-02-23 01:04:10,483 | INFO     | mean x: 1771798572.5
[2026-02-23 02:05:09] 2026-02-23 01:04:10,484 | INFO     | mean y: 2579493.3545454545
[2026-02-23 02:05:09] 2026-02-23 01:04:10,484 | INFO     | intersect: 12017777164.080927
[2026-02-23 02:05:09] 2026-02-23 01:04:10,484 | INFO     | chi2: 1.1677017350642034
[2026-02-23 02:05:09] 2026-02-23 01:04:10,484 | INFO     | current chi2=1.1677017350642034 (change=75.11409183750058 %)
[2026-02-23 02:05:09] 2026-02-23 01:04:10,485 | INFO     | sum of square deviations: 10644478650.0
[2026-02-23 02:05:09] 2026-02-23 01:04:10,488 | INFO     | sum of deviations: -90445301155.0
[2026-02-23 02:05:09] 2026-02-23 01:04:10,488 | INFO     | mean x: 1771798725.0
[2026-02-23 02:05:09] 2026-02-23 01:04:10,488 | INFO     | mean y: 2584019.876923077
[2026-02-23 02:05:09] 2026-02-23 01:04:10,489 | INFO     | intersect: 15057418975.900816
[2026-02-23 02:05:09] 2026-02-23 01:04:10,489 | INFO     | chi2: 1.0484501682925726
[2026-02-23 02:05:09] 2026-02-23 01:04:10,489 | INFO     | current chi2=1.0484501682925726 (change=10.212502318931122 %)
[2026-02-23 02:05:09] 2026-02-23 01:04:10,489 | INFO     | left removable region: 20
[2026-02-23 02:05:09] 2026-02-23 01:04:10,490 | INFO     | sum of square deviations: 9148487810.0
[2026-02-23 02:05:09] 2026-02-23 01:04:10,493 | INFO     | sum of deviations: -56191572032.0
[2026-02-23 02:05:09] 2026-02-23 01:04:10,493 | INFO     | mean x: 1771798847.0
[2026-02-23 02:05:09] 2026-02-23 01:04:10,493 | INFO     | mean y: 2587674.061488673
[2026-02-23 02:05:09] 2026-02-23 01:04:10,493 | INFO     | intersect: 10885278300.657518
[2026-02-23 02:05:09] 2026-02-23 01:04:10,494 | INFO     | chi2: 0.23387765605096283
[2026-02-23 02:05:09] 2026-02-23 01:04:10,494 | INFO     | current memory leak: -6.14 B/s (using 309 data points, chi2=0.23)
[2026-02-23 02:05:09] 2026-02-23 01:04:10,494 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-02-23 02:05:09] 2026-02-23 01:04:10,495 | INFO     | ..............................
[2026-02-23 02:05:09] 2026-02-23 01:04:10,495 | INFO     | . Timing measurements:
[2026-02-23 02:05:09] 2026-02-23 01:04:10,495 | INFO     | . get job = 0 s
[2026-02-23 02:05:09] 2026-02-23 01:04:10,495 | INFO     | . initial setup = 105 s
[2026-02-23 02:05:09] 2026-02-23 01:04:10,495 | INFO     | . payload setup = 141 s
[2026-02-23 02:05:09] 2026-02-23 01:04:10,495 | INFO     | . stage-in = 0 s
[2026-02-23 02:05:09] 2026-02-23 01:04:10,495 | INFO     | . payload execution = 20521 s
[2026-02-23 02:05:09] 2026-02-23 01:04:10,495 | INFO     | . stage-out = 3 s
[2026-02-23 02:05:09] 2026-02-23 01:04:10,496 | INFO     | . log creation = 1 s
[2026-02-23 02:05:09] 2026-02-23 01:04:10,496 | INFO     | ..............................
[2026-02-23 02:05:09] 2026-02-23 01:04:10,675 | INFO     | 
[2026-02-23 02:05:09] 2026-02-23 01:04:10,676 | INFO     | job summary report
[2026-02-23 02:05:09] 2026-02-23 01:04:10,676 | INFO     | --------------------------------------------------
[2026-02-23 02:05:09] 2026-02-23 01:04:10,676 | INFO     | PanDA job id: 7021122131
[2026-02-23 02:05:09] 2026-02-23 01:04:10,676 | INFO     | task id: 48508763
[2026-02-23 02:05:09] 2026-02-23 01:04:10,676 | INFO     | errors: (none)
[2026-02-23 02:05:09] 2026-02-23 01:04:10,676 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-23 02:05:09] 2026-02-23 01:04:10,676 | INFO     | pilot state: finished 
[2026-02-23 02:05:09] 2026-02-23 01:04:10,676 | INFO     | transexitcode: 0
[2026-02-23 02:05:09] 2026-02-23 01:04:10,676 | INFO     | exeerrorcode: 0
[2026-02-23 02:05:09] 2026-02-23 01:04:10,677 | INFO     | exeerrordiag: 
[2026-02-23 02:05:09] 2026-02-23 01:04:10,677 | INFO     | exitcode: 0
[2026-02-23 02:05:09] 2026-02-23 01:04:10,677 | INFO     | exitmsg: OK
[2026-02-23 02:05:09] 2026-02-23 01:04:10,677 | INFO     | cpuconsumptiontime: 78000 s
[2026-02-23 02:05:09] 2026-02-23 01:04:10,677 | INFO     | nevents: 400
[2026-02-23 02:05:09] 2026-02-23 01:04:10,677 | INFO     | neventsw: 0
[2026-02-23 02:05:09] 2026-02-23 01:04:10,677 | INFO     | pid: 18138
[2026-02-23 02:05:09] 2026-02-23 01:04:10,677 | INFO     | pgrp: 18138
[2026-02-23 02:05:09] 2026-02-23 01:04:10,677 | INFO     | corecount: 8
[2026-02-23 02:05:09] 2026-02-23 01:04:10,677 | INFO     | event service: False
[2026-02-23 02:05:09] 2026-02-23 01:04:10,678 | INFO     | sizes: {0: 2281830, 1: 2282291, 12: 2282291, 20666: 2315729, 20670: 2324727, 20672: 2324783, 20674: 2325105}
[2026-02-23 02:05:09] 2026-02-23 01:04:10,678 | INFO     | --------------------------------------------------
[2026-02-23 02:05:09] 2026-02-23 01:04:10,678 | INFO     | 
[2026-02-23 02:05:09] 2026-02-23 01:04:10,678 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-02-23 02:05:09] 2026-02-23 01:04:11,286 | INFO     | time since job start (20688s) is within the limit (349056.0s)
[2026-02-23 02:05:09] 2026-02-23 01:04:11,367 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-23 02:05:09] 2026-02-23 01:04:11,367 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-23 02:05:09] 2026-02-23 01:04:11,367 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-23 02:05:09] 2026-02-23 01:04:11,367 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-23 02:05:09] 2026-02-23 01:04:11,367 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-23 02:05:09] 2026-02-23 01:04:11,367 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-23 02:05:09] 2026-02-23 01:04:11,368 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-23 02:05:09] 2026-02-23 01:04:11,368 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-23 02:05:09] 2026-02-23 01:04:11,368 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-23 02:05:09] 2026-02-23 01:04:11,368 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-23 02:05:09] 2026-02-23 01:04:11,368 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-23 02:05:09] 2026-02-23 01:04:11,368 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-23 02:05:09] 2026-02-23 01:04:11,368 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-23 02:05:09] 2026-02-23 01:04:11,368 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-23 02:05:09] 2026-02-23 01:04:11,368 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-23 02:05:09] 2026-02-23 01:04:11,368 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-23 02:05:09] 2026-02-23 01:04:11,369 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-23 02:05:09] 2026-02-23 01:04:11,369 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-23 02:05:09] 2026-02-23 01:04:11,369 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-23 02:05:09] 2026-02-23 01:04:11,369 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-23 02:05:09] 2026-02-23 01:04:11,369 | INFO     | job 7021122131 has completed (purged errors)
[2026-02-23 02:05:09] 2026-02-23 01:04:11,369 | INFO     | overall cleanup function is called
[2026-02-23 02:05:09] 2026-02-23 01:04:12,378 | INFO     | --- collectZombieJob: --- 10, [18138]
[2026-02-23 02:05:09] 2026-02-23 01:04:12,379 | INFO     | zombie collector waiting for pid 18138
[2026-02-23 02:05:09] 2026-02-23 01:04:12,379 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-23 02:05:09] 2026-02-23 01:04:12,379 | INFO     | collected zombie processes
[2026-02-23 02:05:09] 2026-02-23 01:04:12,379 | INFO     | will attempt to kill all subprocesses of pid=18138
[2026-02-23 02:05:09] 2026-02-23 01:04:12,499 | INFO     | process IDs to be killed: [18138] (in reverse order)
[2026-02-23 02:05:09] 2026-02-23 01:04:13,135 | WARNING  | found no corresponding commands to process id(s)
[2026-02-23 02:05:09] 2026-02-23 01:04:13,135 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-23 02:05:09] 2026-02-23 01:04:13,138 | INFO     | did not find any defunct processes belonging to 18138
[2026-02-23 02:05:09] 2026-02-23 01:04:13,141 | INFO     | did not find any defunct processes belonging to 18138
[2026-02-23 02:05:09] 2026-02-23 01:04:13,141 | INFO     | ready for new job
[2026-02-23 02:05:09] 2026-02-23 01:04:13,141 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-23 02:05:09] 2026-02-23 01:04:13,143 | INFO     | **************************************
[2026-02-23 02:05:09] 2026-02-23 01:04:13,144 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-23 02:05:09] 2026-02-23 01:04:13,144 | INFO     | **************************************
[2026-02-23 02:05:09] 2026-02-23 01:04:13,144 | INFO     | 
[2026-02-23 02:05:09] 2026-02-23 01:04:13,144 | INFO     | pilot is running in a VM
[2026-02-23 02:05:09] 2026-02-23 01:04:13,144 | INFO     | architecture information:
[2026-02-23 02:05:09] 2026-02-23 01:04:13,153 | INFO     | executing command: cat /etc/os-release
[2026-02-23 02:05:09] 2026-02-23 01:04:13,427 | INFO     | cat /etc/os-release:
[2026-02-23 02:05:09] NAME="CentOS Linux"
[2026-02-23 02:05:09] VERSION="7 (Core)"
[2026-02-23 02:05:09] ID="centos"
[2026-02-23 02:05:09] ID_LIKE="rhel fedora"
[2026-02-23 02:05:09] VERSION_ID="7"
[2026-02-23 02:05:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-23 02:05:09] ANSI_COLOR="0;31"
[2026-02-23 02:05:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-23 02:05:09] HOME_URL="https://www.centos.org/"
[2026-02-23 02:05:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-23 02:05:09] 
[2026-02-23 02:05:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-23 02:05:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-23 02:05:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-23 02:05:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-23 02:05:09] 
[2026-02-23 02:05:09] 2026-02-23 01:04:13,434 | INFO     | **************************************
[2026-02-23 02:05:09] 2026-02-23 01:04:13,939 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-02-23 02:05:09] 2026-02-23 01:04:14,194 | INFO     | sufficient remaining disk space (496769171456 B)
[2026-02-23 02:05:09] 2026-02-23 01:04:14,194 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-23 02:05:09] 2026-02-23 01:04:14,194 | INFO     | current server update state: UPDATING_FINAL
[2026-02-23 02:05:09] 2026-02-23 01:04:14,194 | INFO     | update_server=False
[2026-02-23 02:05:09] 2026-02-23 01:04:14,195 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-23 02:05:09] 2026-02-23 01:04:14,238 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-23 02:05:09] 2026-02-23 01:04:14,426 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-23 02:05:09] 2026-02-23 01:04:14,427 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-23 02:05:09] 2026-02-23 01:04:14,427 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-23 02:05:09] 2026-02-23 01:04:14,427 | INFO     | will abort loop
[2026-02-23 02:05:09] 2026-02-23 01:04:14,602 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-23 02:05:09] 2026-02-23 01:04:15,140 | INFO     | all data control threads have been joined
[2026-02-23 02:05:09] 2026-02-23 01:04:15,200 | INFO     | [job] retrieve thread has finished
[2026-02-23 02:05:09] 2026-02-23 01:04:15,220 | INFO     | [payload] execute_payloads thread has finished
[2026-02-23 02:05:09] 2026-02-23 01:04:15,286 | INFO     | all job control threads have been joined
[2026-02-23 02:05:09] 2026-02-23 01:04:15,432 | INFO     | [job] job monitor thread has finished
[2026-02-23 02:05:09] 2026-02-23 01:04:15,572 | INFO     | all payload control threads have been joined
[2026-02-23 02:05:09] 2026-02-23 01:04:15,689 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-23 02:05:09] 2026-02-23 01:04:15,724 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-23 02:05:09] 2026-02-23 01:04:15,756 | INFO     | [job] create_data_payload thread has finished
[2026-02-23 02:05:09] 2026-02-23 01:04:15,757 | INFO     | [data] copytool_in thread has finished
[2026-02-23 02:05:09] 2026-02-23 01:04:15,991 | INFO     | [payload] failed_post thread has finished
[2026-02-23 02:05:09] 2026-02-23 01:04:16,072 | INFO     | [job] validate thread has finished
[2026-02-23 02:05:09] 2026-02-23 01:04:16,148 | INFO     | [data] control thread has finished
[2026-02-23 02:05:09] 2026-02-23 01:04:16,186 | INFO     | [payload] validate_pre thread has finished
[2026-02-23 02:05:09] 2026-02-23 01:04:16,218 | INFO     | [payload] validate_post thread has finished
[2026-02-23 02:05:09] 2026-02-23 01:04:16,244 | INFO     | [data] copytool_out thread has finished
[2026-02-23 02:05:09] 2026-02-23 01:04:16,292 | INFO     | [job] control thread has finished
[2026-02-23 02:05:09] 2026-02-23 01:04:16,578 | INFO     | [payload] control thread has finished
[2026-02-23 02:05:09] 2026-02-23 01:04:16,695 | INFO     | [job] queue monitor thread has finished
[2026-02-23 02:05:09] 2026-02-23 01:04:18,611 | INFO     | [data] queue_monitor thread has finished
[2026-02-23 02:05:09] 2026-02-23 01:04:44,512 | INFO     | PID=13601 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-23 02:05:09] 2026-02-23 01:04:44,512 | INFO     | .. there are 9 such processes running
[2026-02-23 02:05:09] 2026-02-23 01:04:44,513 | INFO     | found 0 job(s) in 20 queues
[2026-02-23 02:05:09] 2026-02-23 01:04:44,513 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-23 02:05:09] 2026-02-23 01:04:44,513 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-23 02:05:09] 2026-02-23 01:04:58,630 | INFO     | [monitor] cgroup control has ended
[2026-02-23 02:05:09] 2026-02-23 01:04:59,749 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139690025781056)>', '<ExcThread(monitor, started 139689807456000)>']
[2026-02-23 02:05:09] 2026-02-23 01:05:00,608 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-23 02:05:09] 2026-02-23 01:05:00,609 | INFO     | [monitor] control thread has ended
[2026-02-23 02:05:09] 2026-02-23 01:05:04,775 | INFO     | all workflow threads have been joined
[2026-02-23 02:05:09] 2026-02-23 01:05:04,776 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-23 02:05:09] 2026-02-23 01:05:04,776 | INFO     | traces error code: 0
[2026-02-23 02:05:09] 2026-02-23 01:05:04,776 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-23 02:05:09] 2026-02-23 01:05:05,105 [wrapper] ==== pilot stdout END ====
[2026-02-23 02:05:09] 2026-02-23 01:05:05,159 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-23 02:05:09] 2026-02-23 01:05:05,250 [wrapper] pilotpid: 13601
[2026-02-23 02:05:09] 2026-02-23 01:05:05,310 [wrapper] Pilot exit status: 0
[2026-02-23 02:05:09] 2026-02-23 01:05:05,738 [wrapper] pandaids: 7021122131
[2026-02-23 02:05:09] 2026-02-23 01:05:06,612 [wrapper] cleanup supervisor_pilot 19046 13602
[2026-02-23 02:05:09] 2026-02-23 01:05:06,704 [wrapper] Test setup, not cleaning
[2026-02-23 02:05:09] 2026-02-23 01:05:06,751 [wrapper] apfmon messages muted
[2026-02-23 02:05:09] 2026-02-23 01:05:06,846 [wrapper] ==== wrapper stdout END ====
[2026-02-23 02:05:09] 2026-02-23 01:05:06,925 [wrapper] ==== wrapper stderr END ====
[2026-02-23 02:05:09]  *** Error codes and diagnostics ***
[2026-02-23 02:05:09]     "exeErrorCode": 0,
[2026-02-23 02:05:09]     "exeErrorDiag": "",
[2026-02-23 02:05:09]     "pilotErrorCode": 0,
[2026-02-23 02:05:09]     "pilotErrorDiag": "",
[2026-02-23 02:05:09]  *** Listing of results directory ***
[2026-02-23 02:05:09] total 951764
[2026-02-23 02:05:09] -rw-r--r--. 1 boinc boinc      5111 Feb 19 14:45 queuedata.json
[2026-02-23 02:05:09] -rw-r--r--. 1 boinc boinc    584627 Feb 19 14:45 pilot3.tar.gz
[2026-02-23 02:05:09] -rwx------. 1 boinc boinc     36322 Feb 19 14:46 runpilot2-wrapper.sh
[2026-02-23 02:05:09] -rw-r--r--. 1 boinc boinc       100 Feb 22 20:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-23 02:05:09] -rwxr-xr-x. 1 boinc boinc      7986 Feb 22 20:13 run_atlas
[2026-02-23 02:05:09] -rw-r--r--. 1 boinc boinc       105 Feb 22 20:13 job.xml
[2026-02-23 02:05:09] -rw-r--r--. 1 boinc boinc      6390 Feb 22 20:13 init_data.xml
[2026-02-23 02:05:09] -rw-r--r--. 2 boinc boinc 676911119 Feb 22 20:13 EVNT.48508760._000912.pool.root.1
[2026-02-23 02:05:09] -rw-r--r--. 2 boinc boinc     15845 Feb 22 20:13 start_atlas.sh
[2026-02-23 02:05:09] drwxrwx--x. 2 boinc boinc        68 Feb 22 20:13 shared
[2026-02-23 02:05:09] -rw-r--r--. 2 boinc boinc    597946 Feb 22 20:13 input.tar.gz
[2026-02-23 02:05:09] -rw-r--r--. 1 boinc boinc         0 Feb 22 20:13 boinc_lockfile
[2026-02-23 02:05:09] -rw-r--r--. 1 boinc boinc      2553 Feb 22 20:14 pandaJob.out
[2026-02-23 02:05:09] -rw-------. 1 boinc boinc       415 Feb 22 20:19 workernode_map.json
[2026-02-23 02:05:09] -rw-------. 1 boinc boinc    998264 Feb 22 20:19 agis_schedconf.cvmfs.json
[2026-02-23 02:05:09] drwx------. 5 boinc boinc      4096 Feb 22 20:19 pilot3
[2026-02-23 02:05:09] -rw-------. 1 boinc boinc 286874271 Feb 23 02:02 HITS.48508763._047374.pool.root.1
[2026-02-23 02:05:09] -rw-r--r--. 1 boinc boinc       531 Feb 23 02:03 boinc_task_state.xml
[2026-02-23 02:05:09] -rw-------. 1 boinc boinc      1016 Feb 23 02:03 memory_monitor_summary.json
[2026-02-23 02:05:09] -rw-------. 1 boinc boinc   1513015 Feb 23 02:04 agis_ddmendpoints.agis.ALL.json
[2026-02-23 02:05:09] -rw-------. 1 boinc boinc    580013 Feb 23 02:04 log.48508763._047374.job.log.tgz.1
[2026-02-23 02:05:09] -rw-------. 1 boinc boinc      6324 Feb 23 02:04 heartbeat.json
[2026-02-23 02:05:09] -rw-------. 1 boinc boinc        95 Feb 23 02:04 pilot_heartbeat.json
[2026-02-23 02:05:09] -rw-r--r--. 1 boinc boinc      8192 Feb 23 02:04 boinc_mmap_file
[2026-02-23 02:05:09] -rw-r--r--. 1 boinc boinc        28 Feb 23 02:04 wrapper_checkpoint.txt
[2026-02-23 02:05:09] -rw-------. 1 boinc boinc      5066 Feb 23 02:05 pilotlog.txt
[2026-02-23 02:05:09] -rw-------. 1 boinc boinc   2871799 Feb 23 02:05 log.48508763._047374.job.log.1
[2026-02-23 02:05:09] -rw-------. 1 boinc boinc       357 Feb 23 02:05 output.list
[2026-02-23 02:05:09] -rw-r--r--. 1 boinc boinc       620 Feb 23 02:05 runtime_log
[2026-02-23 02:05:09] -rw-------. 1 boinc boinc   3471360 Feb 23 02:05 result.tar.gz
[2026-02-23 02:05:09] -rw-r--r--. 1 boinc boinc      8816 Feb 23 02:05 runtime_log.err
[2026-02-23 02:05:09] -rw-------. 1 boinc boinc       656 Feb 23 02:05 1URLDmnXJD9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmn6xKDmf4PjQm.diag
[2026-02-23 02:05:09] -rw-r--r--. 1 boinc boinc     20915 Feb 23 02:05 stderr.txt
[2026-02-23 02:05:09] HITS file was successfully produced:
[2026-02-23 02:05:09] -rw-------. 1 boinc boinc 286874271 Feb 23 02:02 shared/HITS.pool.root.1
[2026-02-23 02:05:09]  *** Contents of shared directory: ***
[2026-02-23 02:05:09] total 945192
[2026-02-23 02:05:09] -rw-r--r--. 2 boinc boinc 676911119 Feb 22 20:13 ATLAS.root_0
[2026-02-23 02:05:09] -rw-r--r--. 2 boinc boinc     15845 Feb 22 20:13 start_atlas.sh
[2026-02-23 02:05:09] -rw-r--r--. 2 boinc boinc    597946 Feb 22 20:13 input.tar.gz
[2026-02-23 02:05:09] -rw-------. 1 boinc boinc 286874271 Feb 23 02:02 HITS.pool.root.1
[2026-02-23 02:05:09] -rw-------. 1 boinc boinc   3471360 Feb 23 02:05 result.tar.gz
02:05:10 (9525): run_atlas exited; CPU time 78288.198686
02:05:10 (9525): called boinc_finish(0)

</stderr_txt>
]]>

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