Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:58:09 (3955759): wrapper (7.7.26015): starting
04:58:09 (3955759): wrapper: running run_atlas (--nthreads 4)
[2026-02-21 04:58:09] Arguments: --nthreads 4
[2026-02-21 04:58:09] Threads: 4
[2026-02-21 04:58:09] Checking for CVMFS
[2026-02-21 04:58:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-21 04:58:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-21 04:58:09] Running cvmfs_config stat atlas.cern.ch
[2026-02-21 04:58:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-21 04:58:09] 2.9.2.0 532808 8996 99708 156470 2 50 33531555 36864001 0 130560 0 3540784 99.984 306865 12552 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-21 04:58:09] CVMFS is ok
[2026-02-21 04:58:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-21 04:58:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-21 04:58:09] Further information can be found at the LHC@home message board.
[2026-02-21 04:58:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-21 04:58:09] Checking for apptainer binary...
[2026-02-21 04:58:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-21 04:58:09] Running /usr/bin/apptainer --version
[2026-02-21 04:58:09] apptainer version 1.4.1-1.1
[2026-02-21 04:58:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-21 04:58:09] atlasA237
[2026-02-21 04:58:09] apptainer works
[2026-02-21 04:58:09] Set ATHENA_PROC_NUMBER=4
[2026-02-21 04:58:09] Set ATHENA_CORE_NUMBER=4
[2026-02-21 04:58:09] Starting ATLAS job with PandaID=7023420308
[2026-02-21 04:58:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-21 06:47:37]  *** The last 200 lines of the pilot log: ***
[2026-02-21 06:47:37] 2026-02-21 05:47:21,509 | INFO     | will attempt to kill all subprocesses of pid=3964562
[2026-02-21 06:47:37] 2026-02-21 05:47:21,577 | INFO     | process IDs to be killed: [3964562] (in reverse order)
[2026-02-21 06:47:37] 2026-02-21 05:47:21,620 | WARNING  | found no corresponding commands to process id(s)
[2026-02-21 06:47:37] 2026-02-21 05:47:21,620 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-21 06:47:37] 2026-02-21 05:47:21,623 | INFO     | did not find any defunct processes belonging to 3964562
[2026-02-21 06:47:37] 2026-02-21 05:47:21,626 | INFO     | did not find any defunct processes belonging to 3964562
[2026-02-21 06:47:37] 2026-02-21 05:47:21,626 | INFO     | ready for new job
[2026-02-21 06:47:37] 2026-02-21 05:47:21,626 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-21 06:47:37] 2026-02-21 05:47:21,627 | INFO     | **************************************
[2026-02-21 06:47:37] 2026-02-21 05:47:21,627 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-21 06:47:37] 2026-02-21 05:47:21,627 | INFO     | **************************************
[2026-02-21 06:47:37] 2026-02-21 05:47:21,627 | INFO     | 
[2026-02-21 06:47:37] 2026-02-21 05:47:21,627 | INFO     | architecture information:
[2026-02-21 06:47:37] 2026-02-21 05:47:21,627 | INFO     | executing command: cat /etc/os-release
[2026-02-21 06:47:37] 2026-02-21 05:47:21,641 | INFO     | cat /etc/os-release:
[2026-02-21 06:47:37] NAME="CentOS Linux"
[2026-02-21 06:47:37] VERSION="7 (Core)"
[2026-02-21 06:47:37] ID="centos"
[2026-02-21 06:47:37] ID_LIKE="rhel fedora"
[2026-02-21 06:47:37] VERSION_ID="7"
[2026-02-21 06:47:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-21 06:47:37] ANSI_COLOR="0;31"
[2026-02-21 06:47:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-21 06:47:37] HOME_URL="https://www.centos.org/"
[2026-02-21 06:47:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-21 06:47:37] 
[2026-02-21 06:47:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-21 06:47:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-21 06:47:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-21 06:47:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-21 06:47:37] 
[2026-02-21 06:47:37] 2026-02-21 05:47:21,642 | INFO     | **************************************
[2026-02-21 06:47:37] 2026-02-21 05:47:22,145 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-21 06:47:37] 2026-02-21 05:47:22,160 | INFO     | sufficient remaining disk space (326916636672 B)
[2026-02-21 06:47:37] 2026-02-21 05:47:22,160 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-21 06:47:37] 2026-02-21 05:47:22,160 | INFO     | current server update state: UPDATING_FINAL
[2026-02-21 06:47:37] 2026-02-21 05:47:22,160 | INFO     | update_server=False
[2026-02-21 06:47:37] 2026-02-21 05:47:22,160 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-21 06:47:37] 2026-02-21 05:47:22,161 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-21 06:47:37] 2026-02-21 05:47:22,161 | INFO     | found 0 job(s) in 20 queues
[2026-02-21 06:47:37] 2026-02-21 05:47:22,161 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-21 06:47:37] 2026-02-21 05:47:22,161 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-21 06:47:37] 2026-02-21 05:47:22,161 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-21 06:47:37] 2026-02-21 05:47:22,161 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-21 06:47:37] 2026-02-21 05:47:22,161 | INFO     | will abort loop
[2026-02-21 06:47:37] 2026-02-21 05:47:22,161 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-21 06:47:37] 2026-02-21 05:47:22,410 | INFO     | job.realtimelogging is not enabled
[2026-02-21 06:47:37] 2026-02-21 05:47:22,568 | INFO     | all job control threads have been joined
[2026-02-21 06:47:37] 2026-02-21 05:47:22,653 | INFO     | all payload control threads have been joined
[2026-02-21 06:47:37] 2026-02-21 05:47:22,950 | INFO     | all data control threads have been joined
[2026-02-21 06:47:37] 2026-02-21 05:47:23,166 | INFO     | [job] retrieve thread has finished
[2026-02-21 06:47:37] 2026-02-21 05:47:23,167 | INFO     | [job] job monitor thread has finished
[2026-02-21 06:47:37] 2026-02-21 05:47:23,167 | INFO     | [job] queue monitor thread has finished
[2026-02-21 06:47:37] 2026-02-21 05:47:23,416 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-21 06:47:37] 2026-02-21 05:47:23,574 | INFO     | [job] control thread has finished
[2026-02-21 06:47:37] 2026-02-21 05:47:23,595 | INFO     | [payload] validate_post thread has finished
[2026-02-21 06:47:37] 2026-02-21 05:47:23,657 | INFO     | [job] validate thread has finished
[2026-02-21 06:47:37] 2026-02-21 05:47:23,659 | INFO     | [payload] control thread has finished
[2026-02-21 06:47:37] 2026-02-21 05:47:23,723 | INFO     | [job] create_data_payload thread has finished
[2026-02-21 06:47:37] 2026-02-21 05:47:23,782 | INFO     | [payload] validate_pre thread has finished
[2026-02-21 06:47:37] 2026-02-21 05:47:23,914 | INFO     | [data] copytool_in thread has finished
[2026-02-21 06:47:37] 2026-02-21 05:47:23,952 | INFO     | [data] control thread has finished
[2026-02-21 06:47:37] 2026-02-21 05:47:24,167 | INFO     | [data] copytool_out thread has finished
[2026-02-21 06:47:37] 2026-02-21 05:47:24,231 | INFO     | [payload] execute_payloads thread has finished
[2026-02-21 06:47:37] 2026-02-21 05:47:24,251 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-21 06:47:37] 2026-02-21 05:47:24,692 | INFO     | [payload] failed_post thread has finished
[2026-02-21 06:47:37] 2026-02-21 05:47:28,258 | INFO     | [data] queue_monitor thread has finished
[2026-02-21 06:47:37] 2026-02-21 05:47:30,725 | INFO     | [monitor] cgroup control has ended
[2026-02-21 06:47:37] 2026-02-21 05:47:32,090 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140123439273792)>', '<ExcThread(monitor, started 140122796304128)>']
[2026-02-21 06:47:37] 2026-02-21 05:47:32,209 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-21 06:47:37] 2026-02-21 05:47:32,209 | INFO     | [monitor] control thread has ended
[2026-02-21 06:47:37] 2026-02-21 05:47:37,112 | INFO     | all workflow threads have been joined
[2026-02-21 06:47:37] 2026-02-21 05:47:37,112 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-21 06:47:37] 2026-02-21 05:47:37,112 | INFO     | traces error code: 0
[2026-02-21 06:47:37] 2026-02-21 05:47:37,112 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-21 06:47:37] 2026-02-21 05:47:37,182 [wrapper] ==== pilot stdout END ====
[2026-02-21 06:47:37] 2026-02-21 05:47:37,186 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-21 06:47:37] 2026-02-21 05:47:37,189 [wrapper] pilotpid: 3959929
[2026-02-21 06:47:37] 2026-02-21 05:47:37,193 [wrapper] Pilot exit status: 0
[2026-02-21 06:47:37] 2026-02-21 05:47:37,204 [wrapper] pandaids: 7023420308
[2026-02-21 06:47:37] 2026-02-21 05:47:37,231 [wrapper] cleanup supervisor_pilot 4000555 3959930
[2026-02-21 06:47:37] 2026-02-21 05:47:37,234 [wrapper] Test setup, not cleaning
[2026-02-21 06:47:37] 2026-02-21 05:47:37,238 [wrapper] apfmon messages muted
[2026-02-21 06:47:37] 2026-02-21 05:47:37,242 [wrapper] ==== wrapper stdout END ====
[2026-02-21 06:47:37] 2026-02-21 05:47:37,246 [wrapper] ==== wrapper stderr END ====
[2026-02-21 06:47:37]  *** Error codes and diagnostics ***
[2026-02-21 06:47:37]     "exeErrorCode": 0,
[2026-02-21 06:47:37]     "exeErrorDiag": "",
[2026-02-21 06:47:37]     "pilotErrorCode": 0,
[2026-02-21 06:47:37]     "pilotErrorDiag": "",
[2026-02-21 06:47:37]  *** Listing of results directory ***
[2026-02-21 06:47:37] total 946564
[2026-02-21 06:47:37] -rw-r--r-- 1 boinc boinc    584627 Feb 20 15:48 pilot3.tar.gz
[2026-02-21 06:47:37] -rwx------ 1 boinc boinc     36322 Feb 20 16:04 runpilot2-wrapper.sh
[2026-02-21 06:47:37] -rw-r--r-- 1 boinc boinc      5111 Feb 20 16:04 queuedata.json
[2026-02-21 06:47:37] -rw-r--r-- 1 boinc boinc       100 Feb 21 04:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-21 06:47:37] -rwxr-xr-x 1 boinc boinc      7986 Feb 21 04:58 run_atlas
[2026-02-21 06:47:37] -rw-r--r-- 1 boinc boinc       105 Feb 21 04:58 job.xml
[2026-02-21 06:47:37] -rw-r--r-- 2 boinc boinc 680297364 Feb 21 04:58 EVNT.48508760._000634.pool.root.1
[2026-02-21 06:47:37] -rw-r--r-- 2 boinc boinc    597955 Feb 21 04:58 input.tar.gz
[2026-02-21 06:47:37] -rw-r--r-- 2 boinc boinc     15845 Feb 21 04:58 start_atlas.sh
[2026-02-21 06:47:37] drwxrwx--x 2 boinc boinc      4096 Feb 21 04:58 shared
[2026-02-21 06:47:37] -rw-r--r-- 1 boinc boinc         0 Feb 21 04:58 boinc_setup_complete
[2026-02-21 06:47:37] -rw-r--r-- 1 boinc boinc      6371 Feb 21 04:58 init_data.xml
[2026-02-21 06:47:37] -rw-r--r-- 1 boinc boinc         0 Feb 21 04:58 boinc_lockfile
[2026-02-21 06:47:37] -rw-r--r-- 1 boinc boinc      2550 Feb 21 04:58 pandaJob.out
[2026-02-21 06:47:37] -rw------- 1 boinc boinc   1001564 Feb 21 04:58 agis_schedconf.cvmfs.json
[2026-02-21 06:47:37] -rw------- 1 boinc boinc   1513015 Feb 21 04:58 agis_ddmendpoints.agis.ALL.json
[2026-02-21 06:47:37] -rw------- 1 boinc boinc       424 Feb 21 04:58 workernode_map.json
[2026-02-21 06:47:37] drwx------ 5 boinc boinc      4096 Feb 21 04:58 pilot3
[2026-02-21 06:47:37] -rw------- 1 boinc boinc 282551977 Feb 21 06:46 HITS.48508763._053479.pool.root.1
[2026-02-21 06:47:37] -rw-r--r-- 1 boinc boinc       531 Feb 21 06:46 boinc_task_state.xml
[2026-02-21 06:47:37] -rw------- 1 boinc boinc        95 Feb 21 06:47 pilot_heartbeat.json
[2026-02-21 06:47:37] -rw------- 1 boinc boinc      1023 Feb 21 06:47 memory_monitor_summary.json
[2026-02-21 06:47:37] -rw------- 1 boinc boinc    314786 Feb 21 06:47 log.48508763._053479.job.log.tgz.1
[2026-02-21 06:47:37] -rw------- 1 boinc boinc      6317 Feb 21 06:47 heartbeat.json
[2026-02-21 06:47:37] -rw-r--r-- 1 boinc boinc      8192 Feb 21 06:47 boinc_mmap_file
[2026-02-21 06:47:37] -rw-r--r-- 1 boinc boinc        27 Feb 21 06:47 wrapper_checkpoint.txt
[2026-02-21 06:47:37] -rw------- 1 boinc boinc      4626 Feb 21 06:47 pilotlog.txt
[2026-02-21 06:47:37] -rw------- 1 boinc boinc    942405 Feb 21 06:47 log.48508763._053479.job.log.1
[2026-02-21 06:47:37] -rw------- 1 boinc boinc       357 Feb 21 06:47 output.list
[2026-02-21 06:47:37] -rw-r--r-- 1 boinc boinc       620 Feb 21 06:47 runtime_log
[2026-02-21 06:47:37] -rw------- 1 boinc boinc   1269760 Feb 21 06:47 result.tar.gz
[2026-02-21 06:47:37] -rw------- 1 boinc boinc       660 Feb 21 06:47 oAbNDmvEhD9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmF6yKDmtZMkon.diag
[2026-02-21 06:47:37] -rw-r--r-- 1 boinc boinc      8911 Feb 21 06:47 runtime_log.err
[2026-02-21 06:47:37] -rw-r--r-- 1 boinc boinc     10213 Feb 21 06:47 stderr.txt
[2026-02-21 06:47:37] HITS file was successfully produced:
[2026-02-21 06:47:37] -rw------- 1 boinc boinc 282551977 Feb 21 06:46 shared/HITS.pool.root.1
[2026-02-21 06:47:37]  *** Contents of shared directory: ***
[2026-02-21 06:47:37] total 942136
[2026-02-21 06:47:37] -rw-r--r-- 2 boinc boinc 680297364 Feb 21 04:58 ATLAS.root_0
[2026-02-21 06:47:37] -rw-r--r-- 2 boinc boinc    597955 Feb 21 04:58 input.tar.gz
[2026-02-21 06:47:37] -rw-r--r-- 2 boinc boinc     15845 Feb 21 04:58 start_atlas.sh
[2026-02-21 06:47:37] -rw------- 1 boinc boinc 282551977 Feb 21 06:46 HITS.pool.root.1
[2026-02-21 06:47:37] -rw------- 1 boinc boinc   1269760 Feb 21 06:47 result.tar.gz
06:47:38 (3955759): run_atlas exited; CPU time 24786.555102
06:47:38 (3955759): called boinc_finish(0)

</stderr_txt>
]]>

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