Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:34:54 (515652): wrapper (7.7.26015): starting
05:34:54 (515652): wrapper: running run_atlas (--nthreads 11)
[2026-02-20 05:34:55] Arguments: --nthreads 11
[2026-02-20 05:34:55] Threads: 11
[2026-02-20 05:34:55] Checking for CVMFS
[2026-02-20 05:34:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-20 05:34:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-20 05:34:55] Running cvmfs_config stat atlas.cern.ch
[2026-02-20 05:34:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-20 05:34:55] 2.13.3.0 9798 2013 68280 156444 0 54 31838803 32935937 3664 16776704 0 4721866 99.997 78026 31730 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-20 05:34:55] CVMFS is ok
[2026-02-20 05:34:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-20 05:34:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-20 05:34:55] Further information can be found at the LHC@home message board.
[2026-02-20 05:34:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-20 05:34:55] Checking for apptainer binary...
[2026-02-20 05:34:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-20 05:34:55] Running /usr/bin/apptainer --version
[2026-02-20 05:34:55] apptainer version 1.4.5-2.el9
[2026-02-20 05:34:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-20 05:34:55] c6-1-24-3.aglt2.org
[2026-02-20 05:34:55] apptainer works
[2026-02-20 05:34:55] Set ATHENA_PROC_NUMBER=11
[2026-02-20 05:34:55] Set ATHENA_CORE_NUMBER=11
[2026-02-20 05:34:55] Starting ATLAS job with PandaID=7023041753
[2026-02-20 05:34:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-20 06:40:21]  *** The last 200 lines of the pilot log: ***
[2026-02-20 06:40:21]  guid=9ce8cbab-62fb-4174-8172-f0a66f645e6d
[2026-02-20 06:40:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-20 06:40:21]  is_altstaged=None
[2026-02-20 06:40:21]  is_tar=False
[2026-02-20 06:40:21]  lfn=log.48508763._053203.job.log.tgz.1
[2026-02-20 06:40:21]  mtime=0
[2026-02-20 06:40:21]  protocol_id=None
[2026-02-20 06:40:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-20 06:40:21]  replicas=None
[2026-02-20 06:40:21]  scope=mc23_13p6TeV
[2026-02-20 06:40:21]  status=None
[2026-02-20 06:40:21]  status_code=0
[2026-02-20 06:40:21]  storage_token=
[2026-02-20 06:40:21]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-7023041753/log.48508763._053203.job.log.tgz.1
[2026-02-20 06:40:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/1e/log.48508763._053203.job.log.tgz.1
[2026-02-20 06:40:21]  workdir=None
[2026-02-20 06:40:21] ]
[2026-02-20 06:40:21] 2026-02-20 11:39:30,451 | INFO     | transferring file log.48508763._053203.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-7023041753/log.48508763._053203.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-20 06:40:21] 2026-02-20 11:39:30,452 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-7023041753/log.48508763._053203.job.log.tgz.1 /tmp/boinchome/slots/3/log.48508763._053203.job
[2026-02-20 06:40:21] 2026-02-20 11:39:30,473 | INFO     | adding to output.list: log.48508763._053203.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/1e/log.48508763._053203.job.log.tg
[2026-02-20 06:40:21] 2026-02-20 11:39:30,473 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-20 06:40:21] 2026-02-20 11:39:30,474 | INFO     | summary of transferred files:
[2026-02-20 06:40:21] 2026-02-20 11:39:30,474 | INFO     |  -- lfn=log.48508763._053203.job.log.tgz.1, status_code=0, status=transferred
[2026-02-20 06:40:21] 2026-02-20 11:39:30,474 | INFO     | stage-out finished correctly
[2026-02-20 06:40:21] 2026-02-20 11:39:30,655 | INFO     | PID=519491 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-20 06:40:21] 2026-02-20 11:39:30,655 | INFO     | .. there are 2 such processes running
[2026-02-20 06:40:21] 2026-02-20 11:39:30,841 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-20 06:40:21] 2026-02-20 11:39:30,997 | INFO     | monitor loop #293: job 0:7023041753 is in state 'finished'
[2026-02-20 06:40:21] 2026-02-20 11:39:30,998 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-20 06:40:21] 2026-02-20 11:39:31,656 | INFO     | time since job start (3862s) is within the limit (349056.0s)
[2026-02-20 06:40:21] 2026-02-20 11:39:33,349 | INFO     | job 7023041753 has state=finished
[2026-02-20 06:40:21] 2026-02-20 11:39:33,349 | INFO     | preparing for final server update for job 7023041753 in state='finished'
[2026-02-20 06:40:21] 2026-02-20 11:39:33,349 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-7023041753/jobReport.json
[2026-02-20 06:40:21] 2026-02-20 11:39:33,353 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-02-20 06:40:21] 2026-02-20 11:39:33,354 | INFO     | this job has now completed (state=finished)
[2026-02-20 06:40:21] 2026-02-20 11:39:33,354 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-20 06:40:21] 2026-02-20 11:39:33,354 | INFO     | log transfer has been attempted: DONE
[2026-02-20 06:40:21] 2026-02-20 11:39:33,354 | INFO     | job 7023041753 has finished - writing final server update
[2026-02-20 06:40:21] 2026-02-20 11:39:33,355 | INFO     | total number of processed events: 400 (read)
[2026-02-20 06:40:21] 2026-02-20 11:39:33,366 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7023041753/memory_monitor_summary.json (trf name=prmon)
[2026-02-20 06:40:21] 2026-02-20 11:39:33,367 | INFO     | extracted standard info from prmon json
[2026-02-20 06:40:21] 2026-02-20 11:39:33,367 | INFO     | extracted standard memory fields from prmon json
[2026-02-20 06:40:21] 2026-02-20 11:39:33,367 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-20 06:40:21] 2026-02-20 11:39:33,367 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-20 06:40:21] 2026-02-20 11:39:33,367 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-20 06:40:21] 2026-02-20 11:39:33,368 | INFO     | fitting pss+swap vs Time
[2026-02-20 06:40:21] 2026-02-20 11:39:33,368 | INFO     | sum of square deviations: 54438230.0
[2026-02-20 06:40:21] 2026-02-20 11:39:33,369 | INFO     | sum of deviations: -3632447642.0
[2026-02-20 06:40:21] 2026-02-20 11:39:33,369 | INFO     | mean x: 1771585712.5
[2026-02-20 06:40:21] 2026-02-20 11:39:33,369 | INFO     | mean y: 2842714.75
[2026-02-20 06:40:21] 2026-02-20 11:39:33,369 | INFO     | intersect: 118213746044.47829
[2026-02-20 06:40:21] 2026-02-20 11:39:33,369 | INFO     | chi2: 0.06751197123407678
[2026-02-20 06:40:21] 2026-02-20 11:39:33,369 | INFO     | current memory leak: -66.73 B/s (using 56 data points, chi2=0.07)
[2026-02-20 06:40:21] 2026-02-20 11:39:33,369 | INFO     | could have reported an average CPU frequency of 3089 MHz (6 samples)
[2026-02-20 06:40:21] 2026-02-20 11:39:33,369 | INFO     | ..............................
[2026-02-20 06:40:21] 2026-02-20 11:39:33,369 | INFO     | . Timing measurements:
[2026-02-20 06:40:21] 2026-02-20 11:39:33,369 | INFO     | . get job = 0 s
[2026-02-20 06:40:21] 2026-02-20 11:39:33,369 | INFO     | . initial setup = 6 s
[2026-02-20 06:40:21] 2026-02-20 11:39:33,369 | INFO     | . payload setup = 5 s
[2026-02-20 06:40:21] 2026-02-20 11:39:33,369 | INFO     | . stage-in = 0 s
[2026-02-20 06:40:21] 2026-02-20 11:39:33,369 | INFO     | . payload execution = 3838 s
[2026-02-20 06:40:21] 2026-02-20 11:39:33,370 | INFO     | . stage-out = 0 s
[2026-02-20 06:40:21] 2026-02-20 11:39:33,370 | INFO     | . log creation = 0 s
[2026-02-20 06:40:21] 2026-02-20 11:39:33,370 | INFO     | ..............................
[2026-02-20 06:40:21] 2026-02-20 11:39:33,411 | INFO     | 
[2026-02-20 06:40:21] 2026-02-20 11:39:33,411 | INFO     | job summary report
[2026-02-20 06:40:21] 2026-02-20 11:39:33,411 | INFO     | --------------------------------------------------
[2026-02-20 06:40:21] 2026-02-20 11:39:33,412 | INFO     | PanDA job id: 7023041753
[2026-02-20 06:40:21] 2026-02-20 11:39:33,412 | INFO     | task id: 48508763
[2026-02-20 06:40:21] 2026-02-20 11:39:33,412 | INFO     | errors: (none)
[2026-02-20 06:40:21] 2026-02-20 11:39:33,412 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-20 06:40:21] 2026-02-20 11:39:33,412 | INFO     | pilot state: finished 
[2026-02-20 06:40:21] 2026-02-20 11:39:33,412 | INFO     | transexitcode: 0
[2026-02-20 06:40:21] 2026-02-20 11:39:33,412 | INFO     | exeerrorcode: 0
[2026-02-20 06:40:21] 2026-02-20 11:39:33,412 | INFO     | exeerrordiag: 
[2026-02-20 06:40:21] 2026-02-20 11:39:33,413 | INFO     | exitcode: 0
[2026-02-20 06:40:21] 2026-02-20 11:39:33,413 | INFO     | exitmsg: OK
[2026-02-20 06:40:21] 2026-02-20 11:39:33,413 | INFO     | cpuconsumptiontime: 37408 s
[2026-02-20 06:40:21] 2026-02-20 11:39:33,413 | INFO     | nevents: 400
[2026-02-20 06:40:21] 2026-02-20 11:39:33,413 | INFO     | neventsw: 0
[2026-02-20 06:40:21] 2026-02-20 11:39:33,413 | INFO     | pid: 523921
[2026-02-20 06:40:21] 2026-02-20 11:39:33,413 | INFO     | pgrp: 523921
[2026-02-20 06:40:21] 2026-02-20 11:39:33,413 | INFO     | corecount: 11
[2026-02-20 06:40:21] 2026-02-20 11:39:33,413 | INFO     | event service: False
[2026-02-20 06:40:21] 2026-02-20 11:39:33,414 | INFO     | sizes: {0: 2281944, 1: 2282206, 11: 2282234, 3847: 2308102, 3849: 2317100, 3850: 2317156, 3852: 2317478}
[2026-02-20 06:40:21] 2026-02-20 11:39:33,414 | INFO     | --------------------------------------------------
[2026-02-20 06:40:21] 2026-02-20 11:39:33,414 | INFO     | 
[2026-02-20 06:40:21] 2026-02-20 11:39:33,414 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-02-20 06:40:21] 2026-02-20 11:39:33,437 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-20 06:40:21] 2026-02-20 11:39:33,438 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-20 06:40:21] 2026-02-20 11:39:33,438 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-20 06:40:21] 2026-02-20 11:39:33,438 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-20 06:40:21] 2026-02-20 11:39:33,438 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-20 06:40:21] 2026-02-20 11:39:33,438 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-20 06:40:21] 2026-02-20 11:39:33,439 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-20 06:40:21] 2026-02-20 11:39:33,439 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-20 06:40:21] 2026-02-20 11:39:33,439 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-20 06:40:21] 2026-02-20 11:39:33,439 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-20 06:40:21] 2026-02-20 11:39:33,439 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-20 06:40:21] 2026-02-20 11:39:33,439 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-20 06:40:21] 2026-02-20 11:39:33,439 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-20 06:40:21] 2026-02-20 11:39:33,439 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-20 06:40:21] 2026-02-20 11:39:33,440 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-20 06:40:21] 2026-02-20 11:39:33,440 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-20 06:40:21] 2026-02-20 11:39:33,440 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-20 06:40:21] 2026-02-20 11:39:33,440 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-20 06:40:21] 2026-02-20 11:39:33,440 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-20 06:40:21] 2026-02-20 11:39:33,440 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-20 06:40:21] 2026-02-20 11:39:33,441 | INFO     | job 7023041753 has completed (purged errors)
[2026-02-20 06:40:21] 2026-02-20 11:39:33,441 | INFO     | overall cleanup function is called
[2026-02-20 06:40:21] 2026-02-20 11:39:34,450 | INFO     | --- collectZombieJob: --- 10, [523921]
[2026-02-20 06:40:21] 2026-02-20 11:39:34,451 | INFO     | zombie collector waiting for pid 523921
[2026-02-20 06:40:21] 2026-02-20 11:39:34,451 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-20 06:40:21] 2026-02-20 11:39:34,451 | INFO     | collected zombie processes
[2026-02-20 06:40:21] 2026-02-20 11:39:34,451 | INFO     | will attempt to kill all subprocesses of pid=523921
[2026-02-20 06:40:21] 2026-02-20 11:39:34,575 | INFO     | process IDs to be killed: [523921] (in reverse order)
[2026-02-20 06:40:21] 2026-02-20 11:39:34,628 | WARNING  | found no corresponding commands to process id(s)
[2026-02-20 06:40:21] 2026-02-20 11:39:34,629 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-20 06:40:21] 2026-02-20 11:39:34,639 | INFO     | did not find any defunct processes belonging to 523921
[2026-02-20 06:40:21] 2026-02-20 11:39:34,646 | INFO     | did not find any defunct processes belonging to 523921
[2026-02-20 06:40:21] 2026-02-20 11:39:34,646 | INFO     | ready for new job
[2026-02-20 06:40:21] 2026-02-20 11:39:34,646 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-20 06:40:21] 2026-02-20 11:39:34,647 | INFO     | **************************************
[2026-02-20 06:40:21] 2026-02-20 11:39:34,647 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-20 06:40:21] 2026-02-20 11:39:34,647 | INFO     | **************************************
[2026-02-20 06:40:21] 2026-02-20 11:39:34,647 | INFO     | 
[2026-02-20 06:40:21] 2026-02-20 11:39:34,649 | INFO     | architecture information:
[2026-02-20 06:40:21] 2026-02-20 11:39:34,650 | INFO     | executing command: cat /etc/os-release
[2026-02-20 06:40:21] 2026-02-20 11:39:34,665 | INFO     | cat /etc/os-release:
[2026-02-20 06:40:21] NAME="CentOS Linux"
[2026-02-20 06:40:21] VERSION="7 (Core)"
[2026-02-20 06:40:21] ID="centos"
[2026-02-20 06:40:21] ID_LIKE="rhel fedora"
[2026-02-20 06:40:21] VERSION_ID="7"
[2026-02-20 06:40:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-20 06:40:21] ANSI_COLOR="0;31"
[2026-02-20 06:40:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-20 06:40:21] HOME_URL="https://www.centos.org/"
[2026-02-20 06:40:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-20 06:40:21] 
[2026-02-20 06:40:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-20 06:40:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-20 06:40:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-20 06:40:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-20 06:40:21] 
[2026-02-20 06:40:21] 2026-02-20 11:39:34,665 | INFO     | **************************************
[2026-02-20 06:40:21] 2026-02-20 11:39:35,169 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-02-20 06:40:21] 2026-02-20 11:39:35,190 | INFO     | sufficient remaining disk space (73925656576 B)
[2026-02-20 06:40:21] 2026-02-20 11:39:35,191 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-20 06:40:21] 2026-02-20 11:39:35,191 | INFO     | current server update state: UPDATING_FINAL
[2026-02-20 06:40:21] 2026-02-20 11:39:35,191 | INFO     | update_server=False
[2026-02-20 06:40:21] 2026-02-20 11:39:35,192 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-20 06:40:21] 2026-02-20 11:39:35,192 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-20 06:40:21] 2026-02-20 11:39:35,192 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-20 06:40:21] 2026-02-20 11:39:35,193 | INFO     | aborting loop
[2026-02-20 06:40:21] 2026-02-20 11:39:35,571 | INFO     | all job control threads have been joined
[2026-02-20 06:40:21] 2026-02-20 11:39:36,027 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-20 06:40:21] 2026-02-20 11:39:36,146 | INFO     | all data control threads have been joined
[2026-02-20 06:40:21] 2026-02-20 11:39:36,197 | INFO     | [job] retrieve thread has finished
[2026-02-20 06:40:21] 2026-02-20 11:39:36,198 | INFO     | [job] queue monitor thread has finished
[2026-02-20 06:40:21] 2026-02-20 11:39:36,199 | INFO     | [job] job monitor thread has finished
[2026-02-20 06:40:21] 2026-02-20 11:39:36,248 | INFO     | all payload control threads have been joined
[2026-02-20 06:40:21] 2026-02-20 11:39:36,577 | INFO     | [job] control thread has finished
[2026-02-20 06:40:21] 2026-02-20 11:39:36,712 | INFO     | [payload] execute_payloads thread has finished
[2026-02-20 06:40:21] 2026-02-20 11:39:36,898 | INFO     | [payload] failed_post thread has finished
[2026-02-20 06:40:21] 2026-02-20 11:39:36,903 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-20 06:40:21] 2026-02-20 11:39:37,151 | INFO     | [data] control thread has finished
[2026-02-20 06:40:21] 2026-02-20 11:39:37,214 | INFO     | [job] validate thread has finished
[2026-02-20 06:40:21] 2026-02-20 11:39:37,254 | INFO     | [payload] control thread has finished
[2026-02-20 06:40:21] 2026-02-20 11:39:37,397 | INFO     | [job] create_data_payload thread has finished
[2026-02-20 06:40:21] 2026-02-20 11:39:37,469 | INFO     | [payload] validate_post thread has finished
[2026-02-20 06:40:21] 2026-02-20 11:39:37,528 | INFO     | [payload] validate_pre thread has finished
[2026-02-20 06:40:21] 2026-02-20 11:39:37,559 | INFO     | [data] copytool_in thread has finished
[2026-02-20 06:40:21] 2026-02-20 11:39:38,033 | INFO     | [data] copytool_out thread has finished
[2026-02-20 06:40:21] 2026-02-20 11:39:40,910 | INFO     | [data] queue_monitor thread has finished
[2026-02-20 06:40:21] 2026-02-20 11:39:46,213 | INFO     | job.realtimelogging is not enabled
[2026-02-20 06:40:21] 2026-02-20 11:39:47,219 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-20 06:40:21] 2026-02-20 11:40:04,922 | INFO     | PID=519491 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-20 06:40:21] 2026-02-20 11:40:04,923 | INFO     | .. there are 2 such processes running
[2026-02-20 06:40:21] 2026-02-20 11:40:04,923 | INFO     | found 0 job(s) in 20 queues
[2026-02-20 06:40:21] 2026-02-20 11:40:04,923 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-20 06:40:21] 2026-02-20 11:40:04,923 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-20 06:40:21] 2026-02-20 11:40:15,119 | INFO     | [monitor] cgroup control has ended
[2026-02-20 06:40:21] 2026-02-20 11:40:16,427 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139685504800576)>', '<ExcThread(monitor, started 139684843857664)>']
[2026-02-20 06:40:21] 2026-02-20 11:40:16,985 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-20 06:40:21] 2026-02-20 11:40:16,985 | INFO     | [monitor] control thread has ended
[2026-02-20 06:40:21] 2026-02-20 11:40:21,453 | INFO     | all workflow threads have been joined
[2026-02-20 06:40:21] 2026-02-20 11:40:21,454 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-20 06:40:21] 2026-02-20 11:40:21,454 | INFO     | traces error code: 0
[2026-02-20 06:40:21] 2026-02-20 11:40:21,454 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-20 06:40:21] 2026-02-20 11:40:21,550 [wrapper] ==== pilot stdout END ====
[2026-02-20 06:40:21] 2026-02-20 11:40:21,554 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-20 06:40:21] 2026-02-20 11:40:21,558 [wrapper] pilotpid: 519491
[2026-02-20 06:40:21] 2026-02-20 11:40:21,562 [wrapper] Pilot exit status: 0
[2026-02-20 06:40:21] 2026-02-20 11:40:21,576 [wrapper] pandaids: 7023041753
[2026-02-20 06:40:21] 2026-02-20 11:40:21,619 [wrapper] cleanup supervisor_pilot  662342 519492
[2026-02-20 06:40:21] 2026-02-20 11:40:21,624 [wrapper] Test setup, not cleaning
[2026-02-20 06:40:21] 2026-02-20 11:40:21,629 [wrapper] apfmon messages muted
[2026-02-20 06:40:21] 2026-02-20 11:40:21,633 [wrapper] ==== wrapper stdout END ====
[2026-02-20 06:40:21] 2026-02-20 11:40:21,638 [wrapper] ==== wrapper stderr END ====
[2026-02-20 06:40:21]  *** Error codes and diagnostics ***
[2026-02-20 06:40:21]     "exeErrorCode": 0,
[2026-02-20 06:40:21]     "exeErrorDiag": "",
[2026-02-20 06:40:21]     "pilotErrorCode": 0,
[2026-02-20 06:40:21]     "pilotErrorDiag": "",
[2026-02-20 06:40:21]  *** Listing of results directory ***
[2026-02-20 06:40:21] total 945852
[2026-02-20 06:40:21] -rw-r--r--. 1 boincer umatlas      5111 Feb 20 02:40 queuedata.json
[2026-02-20 06:40:21] -rw-r--r--. 1 boincer umatlas    584627 Feb 20 02:40 pilot3.tar.gz
[2026-02-20 06:40:21] -rwx------. 1 boincer umatlas     36322 Feb 20 02:43 runpilot2-wrapper.sh
[2026-02-20 06:40:21] -rw-r--r--. 1 boincer umatlas       100 Feb 20 05:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-20 06:40:21] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 20 05:34 run_atlas
[2026-02-20 06:40:21] -rw-r--r--. 1 boincer umatlas       105 Feb 20 05:34 job.xml
[2026-02-20 06:40:21] -rw-r--r--. 2 boincer umatlas 684820921 Feb 20 05:34 EVNT.48508760._000868.pool.root.1
[2026-02-20 06:40:21] -rw-r--r--. 2 boincer umatlas     15845 Feb 20 05:34 start_atlas.sh
[2026-02-20 06:40:21] drwxrwx--x. 2 boincer umatlas      4096 Feb 20 05:34 shared
[2026-02-20 06:40:21] -rw-r--r--. 2 boincer umatlas    597963 Feb 20 05:34 input.tar.gz
[2026-02-20 06:40:21] -rw-r--r--. 1 boincer umatlas         0 Feb 20 05:34 boinc_lockfile
[2026-02-20 06:40:21] -rw-r--r--. 1 boincer umatlas      2548 Feb 20 05:34 pandaJob.out
[2026-02-20 06:40:21] -rw-------. 1 boincer umatlas        57 Feb 20 05:34 setup.sh.local
[2026-02-20 06:40:21] -rw-------. 1 boincer umatlas   1001559 Feb 20 05:35 agis_schedconf.cvmfs.json
[2026-02-20 06:40:21] -rw-------. 1 boincer umatlas   1513015 Feb 20 05:35 agis_ddmendpoints.agis.ALL.json
[2026-02-20 06:40:21] -rw-------. 1 boincer umatlas       442 Feb 20 05:35 workernode_map.json
[2026-02-20 06:40:21] drwx------. 5 boincer umatlas      4096 Feb 20 05:35 pilot3
[2026-02-20 06:40:21] -rw-r--r--. 1 boincer umatlas      6843 Feb 20 06:37 init_data.xml
[2026-02-20 06:40:21] -rw-------. 1 boincer umatlas 277926922 Feb 20 06:38 HITS.48508763._053203.pool.root.1
[2026-02-20 06:40:21] -rw-r--r--. 1 boincer umatlas       530 Feb 20 06:39 boinc_task_state.xml
[2026-02-20 06:40:21] -rw-------. 1 boincer umatlas      1033 Feb 20 06:39 memory_monitor_summary.json
[2026-02-20 06:40:21] -rw-------. 1 boincer umatlas    348037 Feb 20 06:39 log.48508763._053203.job.log.tgz.1
[2026-02-20 06:40:21] -rw-------. 1 boincer umatlas      6384 Feb 20 06:39 heartbeat.json
[2026-02-20 06:40:21] -rw-------. 1 boincer umatlas        95 Feb 20 06:40 pilot_heartbeat.json
[2026-02-20 06:40:21] -rw-r--r--. 1 boincer umatlas        27 Feb 20 06:40 wrapper_checkpoint.txt
[2026-02-20 06:40:21] -rw-------. 1 boincer umatlas      4890 Feb 20 06:40 pilotlog.txt
[2026-02-20 06:40:21] -rw-r--r--. 1 boincer umatlas      8192 Feb 20 06:40 boinc_mmap_file
[2026-02-20 06:40:21] -rw-------. 1 boincer umatlas    581765 Feb 20 06:40 log.48508763._053203.job.log.1
[2026-02-20 06:40:21] -rw-------. 1 boincer umatlas       357 Feb 20 06:40 output.list
[2026-02-20 06:40:21] -rw-r--r--. 1 boincer umatlas       620 Feb 20 06:40 runtime_log
[2026-02-20 06:40:21] -rw-------. 1 boincer umatlas    952320 Feb 20 06:40 result.tar.gz
[2026-02-20 06:40:21] -rw-r--r--. 1 boincer umatlas      9348 Feb 20 06:40 runtime_log.err
[2026-02-20 06:40:21] -rw-------. 1 boincer umatlas       650 Feb 20 06:40 04MMDmuLaD9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm42yKDm1DI9Xm.diag
[2026-02-20 06:40:21] -rw-r--r--. 1 boincer umatlas     21421 Feb 20 06:40 stderr.txt
[2026-02-20 06:40:21] HITS file was successfully produced:
[2026-02-20 06:40:21] -rw-------. 1 boincer umatlas 277926922 Feb 20 06:38 shared/HITS.pool.root.1
[2026-02-20 06:40:21]  *** Contents of shared directory: ***
[2026-02-20 06:40:21] total 941728
[2026-02-20 06:40:21] -rw-r--r--. 2 boincer umatlas 684820921 Feb 20 05:34 ATLAS.root_0
[2026-02-20 06:40:21] -rw-r--r--. 2 boincer umatlas     15845 Feb 20 05:34 start_atlas.sh
[2026-02-20 06:40:21] -rw-r--r--. 2 boincer umatlas    597963 Feb 20 05:34 input.tar.gz
[2026-02-20 06:40:21] -rw-------. 1 boincer umatlas 277926922 Feb 20 06:38 HITS.pool.root.1
[2026-02-20 06:40:21] -rw-------. 1 boincer umatlas    952320 Feb 20 06:40 result.tar.gz
06:40:23 (515652): run_atlas exited; CPU time 37484.925956
06:40:23 (515652): called boinc_finish(0)

</stderr_txt>
]]>

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