Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
17:44:54 (416246): wrapper (7.7.26015): starting
17:44:54 (416246): wrapper: running run_atlas (--nthreads 4)
[2026-02-20 17:44:54] Arguments: --nthreads 4
[2026-02-20 17:44:54] Threads: 4
[2026-02-20 17:44:54] Checking for CVMFS
[2026-02-20 17:44:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-20 17:44:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-20 17:44:54] Running cvmfs_config stat atlas.cern.ch
[2026-02-20 17:44:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-20 17:44:54] 2.13.1.0 2420043 8285 67340 156454 1 50 7071964 10240001 911 130560 0 5333891 99.990 286371 461 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-02-20 17:44:54] CVMFS is ok
[2026-02-20 17:44:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-20 17:44:54] Checking for apptainer binary...
[2026-02-20 17:44:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-20 17:44:54] Running /usr/bin/apptainer --version
[2026-02-20 17:44:54] apptainer version 1.4.5
[2026-02-20 17:44:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-20 17:44:54] atlas7l1
[2026-02-20 17:44:54] apptainer works
[2026-02-20 17:44:54] Set ATHENA_PROC_NUMBER=4
[2026-02-20 17:44:54] Set ATHENA_CORE_NUMBER=4
[2026-02-20 17:44:54] Starting ATLAS job with PandaID=7022336191
[2026-02-20 17:44:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-20 20:02:22]  *** The last 200 lines of the pilot log: ***
[2026-02-20 20:02:22] 2026-02-20 19:01:21,659 | INFO     | job 7022336191 has state=finished
[2026-02-20 20:02:22] 2026-02-20 19:01:21,659 | INFO     | preparing for final server update for job 7022336191 in state='finished'
[2026-02-20 20:02:22] 2026-02-20 19:01:21,660 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-7022336191/jobReport.json
[2026-02-20 20:02:22] 2026-02-20 19:01:21,664 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/2/workernode_map.json
[2026-02-20 20:02:22] 2026-02-20 19:01:21,664 | INFO     | this job has now completed (state=finished)
[2026-02-20 20:02:22] 2026-02-20 19:01:21,665 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-20 20:02:22] 2026-02-20 19:01:21,665 | INFO     | log transfer has been attempted: DONE
[2026-02-20 20:02:22] 2026-02-20 19:01:21,665 | INFO     | job 7022336191 has finished - writing final server update
[2026-02-20 20:02:22] 2026-02-20 19:01:21,665 | INFO     | total number of processed events: 400 (read)
[2026-02-20 20:02:22] 2026-02-20 19:01:21,669 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-7022336191/memory_monitor_summary.json (trf name=prmon)
[2026-02-20 20:02:22] 2026-02-20 19:01:21,670 | INFO     | extracted standard info from prmon json
[2026-02-20 20:02:22] 2026-02-20 19:01:21,670 | INFO     | extracted standard memory fields from prmon json
[2026-02-20 20:02:22] 2026-02-20 19:01:21,670 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-20 20:02:22] 2026-02-20 19:01:21,670 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-20 20:02:22] 2026-02-20 19:01:21,670 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-20 20:02:22] 2026-02-20 19:01:21,672 | INFO     | fitting pss+swap vs Time
[2026-02-20 20:02:22] 2026-02-20 19:01:21,672 | INFO     | sum of square deviations: 746051197.5
[2026-02-20 20:02:22] 2026-02-20 19:01:21,672 | INFO     | sum of deviations: -9028898042.000002
[2026-02-20 20:02:22] 2026-02-20 19:01:21,672 | INFO     | mean x: 1771609979.5
[2026-02-20 20:02:22] 2026-02-20 19:01:21,672 | INFO     | mean y: 2417122.76119403
[2026-02-20 20:02:22] 2026-02-20 19:01:21,672 | INFO     | intersect: 21442883847.694252
[2026-02-20 20:02:22] 2026-02-20 19:01:21,672 | INFO     | chi2: 1.8354367830851546
[2026-02-20 20:02:22] 2026-02-20 19:01:21,673 | INFO     | sum of square deviations: 665612480.0
[2026-02-20 20:02:22] 2026-02-20 19:01:21,673 | INFO     | sum of deviations: -8280142562.0
[2026-02-20 20:02:22] 2026-02-20 19:01:21,673 | INFO     | mean x: 1771609827.0
[2026-02-20 20:02:22] 2026-02-20 19:01:21,673 | INFO     | mean y: 2418542.9534883723
[2026-02-20 20:02:22] 2026-02-20 19:01:21,673 | INFO     | intersect: 22041040673.05561
[2026-02-20 20:02:22] 2026-02-20 19:01:21,673 | INFO     | chi2: 1.8341039060527957
[2026-02-20 20:02:22] 2026-02-20 19:01:21,673 | INFO     | current chi2=1.8341039060527957 (change=0.07261906509895903 %)
[2026-02-20 20:02:22] 2026-02-20 19:01:21,673 | INFO     | right removable region: 128
[2026-02-20 20:02:22] 2026-02-20 19:01:21,673 | INFO     | sum of square deviations: 665612480.0
[2026-02-20 20:02:22] 2026-02-20 19:01:21,674 | INFO     | sum of deviations: -28804681960.999996
[2026-02-20 20:02:22] 2026-02-20 19:01:21,674 | INFO     | mean x: 1771610132.0
[2026-02-20 20:02:22] 2026-02-20 19:01:21,674 | INFO     | mean y: 2453944.527131783
[2026-02-20 20:02:22] 2026-02-20 19:01:21,674 | INFO     | intersect: 76669685921.82602
[2026-02-20 20:02:22] 2026-02-20 19:01:21,674 | INFO     | chi2: 0.2439047076321054
[2026-02-20 20:02:22] 2026-02-20 19:01:21,674 | INFO     | current chi2=0.2439047076321054 (change=86.71135340209702 %)
[2026-02-20 20:02:22] 2026-02-20 19:01:21,674 | INFO     | sum of square deviations: 591173875.0
[2026-02-20 20:02:22] 2026-02-20 19:01:21,674 | INFO     | sum of deviations: -24211594332.5
[2026-02-20 20:02:22] 2026-02-20 19:01:21,675 | INFO     | mean x: 1771610284.5
[2026-02-20 20:02:22] 2026-02-20 19:01:21,675 | INFO     | mean y: 2444485.5080645164
[2026-02-20 20:02:22] 2026-02-20 19:01:21,675 | INFO     | intersect: 72558948312.06657
[2026-02-20 20:02:22] 2026-02-20 19:01:21,675 | INFO     | chi2: 0.23677131062080592
[2026-02-20 20:02:22] 2026-02-20 19:01:21,675 | INFO     | current chi2=0.23677131062080592 (change=2.924665571465378 %)
[2026-02-20 20:02:22] 2026-02-20 19:01:21,675 | INFO     | left removable region: 20
[2026-02-20 20:02:22] 2026-02-20 19:01:21,675 | INFO     | sum of square deviations: 390582207.0
[2026-02-20 20:02:22] 2026-02-20 19:01:21,675 | INFO     | sum of deviations: -11306675312.999998
[2026-02-20 20:02:22] 2026-02-20 19:01:21,675 | INFO     | mean x: 1771610406.5
[2026-02-20 20:02:22] 2026-02-20 19:01:21,675 | INFO     | mean y: 2418230.314814815
[2026-02-20 20:02:22] 2026-02-20 19:01:21,675 | INFO     | intersect: 51287457047.83433
[2026-02-20 20:02:22] 2026-02-20 19:01:21,675 | INFO     | chi2: 0.16767280739799104
[2026-02-20 20:02:22] 2026-02-20 19:01:21,676 | INFO     | current memory leak: -28.95 B/s (using 108 data points, chi2=0.17)
[2026-02-20 20:02:22] 2026-02-20 19:01:21,676 | INFO     | could have reported an average CPU frequency of 2400 MHz (8 samples)
[2026-02-20 20:02:22] 2026-02-20 19:01:21,676 | INFO     | ..............................
[2026-02-20 20:02:22] 2026-02-20 19:01:21,676 | INFO     | . Timing measurements:
[2026-02-20 20:02:22] 2026-02-20 19:01:21,676 | INFO     | . get job = 0 s
[2026-02-20 20:02:22] 2026-02-20 19:01:21,676 | INFO     | . initial setup = 3 s
[2026-02-20 20:02:22] 2026-02-20 19:01:21,676 | INFO     | . payload setup = 4 s
[2026-02-20 20:02:22] 2026-02-20 19:01:21,676 | INFO     | . stage-in = 0 s
[2026-02-20 20:02:22] 2026-02-20 19:01:21,676 | INFO     | . payload execution = 8154 s
[2026-02-20 20:02:22] 2026-02-20 19:01:21,676 | INFO     | . stage-out = 0 s
[2026-02-20 20:02:22] 2026-02-20 19:01:21,676 | INFO     | . log creation = 0 s
[2026-02-20 20:02:22] 2026-02-20 19:01:21,676 | INFO     | ..............................
[2026-02-20 20:02:22] 2026-02-20 19:01:21,722 | INFO     | 
[2026-02-20 20:02:22] 2026-02-20 19:01:21,722 | INFO     | job summary report
[2026-02-20 20:02:22] 2026-02-20 19:01:21,722 | INFO     | --------------------------------------------------
[2026-02-20 20:02:22] 2026-02-20 19:01:21,723 | INFO     | PanDA job id: 7022336191
[2026-02-20 20:02:22] 2026-02-20 19:01:21,723 | INFO     | task id: 48508763
[2026-02-20 20:02:22] 2026-02-20 19:01:21,723 | INFO     | errors: (none)
[2026-02-20 20:02:22] 2026-02-20 19:01:21,723 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-20 20:02:22] 2026-02-20 19:01:21,723 | INFO     | pilot state: finished 
[2026-02-20 20:02:22] 2026-02-20 19:01:21,723 | INFO     | transexitcode: 0
[2026-02-20 20:02:22] 2026-02-20 19:01:21,723 | INFO     | exeerrorcode: 0
[2026-02-20 20:02:22] 2026-02-20 19:01:21,723 | INFO     | exeerrordiag: 
[2026-02-20 20:02:22] 2026-02-20 19:01:21,723 | INFO     | exitcode: 0
[2026-02-20 20:02:22] 2026-02-20 19:01:21,723 | INFO     | exitmsg: OK
[2026-02-20 20:02:22] 2026-02-20 19:01:21,723 | INFO     | cpuconsumptiontime: 31259 s
[2026-02-20 20:02:22] 2026-02-20 19:01:21,723 | INFO     | nevents: 400
[2026-02-20 20:02:22] 2026-02-20 19:01:21,723 | INFO     | neventsw: 0
[2026-02-20 20:02:22] 2026-02-20 19:01:21,723 | INFO     | pid: 424637
[2026-02-20 20:02:22] 2026-02-20 19:01:21,723 | INFO     | pgrp: 424637
[2026-02-20 20:02:22] 2026-02-20 19:01:21,723 | INFO     | corecount: 4
[2026-02-20 20:02:22] 2026-02-20 19:01:21,723 | INFO     | event service: False
[2026-02-20 20:02:22] 2026-02-20 19:01:21,723 | INFO     | sizes: {0: 2281735, 1: 2282252, 11: 2282252, 8163: 2310175, 8165: 2319257, 8166: 2319395}
[2026-02-20 20:02:22] 2026-02-20 19:01:21,723 | INFO     | --------------------------------------------------
[2026-02-20 20:02:22] 2026-02-20 19:01:21,723 | INFO     | 
[2026-02-20 20:02:22] 2026-02-20 19:01:21,723 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/2
[2026-02-20 20:02:22] 2026-02-20 19:01:21,737 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-20 20:02:22] 2026-02-20 19:01:21,738 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-20 20:02:22] 2026-02-20 19:01:21,738 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-20 20:02:22] 2026-02-20 19:01:21,738 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-20 20:02:22] 2026-02-20 19:01:21,738 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-20 20:02:22] 2026-02-20 19:01:21,738 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-20 20:02:22] 2026-02-20 19:01:21,738 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-20 20:02:22] 2026-02-20 19:01:21,738 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-20 20:02:22] 2026-02-20 19:01:21,738 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-20 20:02:22] 2026-02-20 19:01:21,738 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-20 20:02:22] 2026-02-20 19:01:21,738 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-20 20:02:22] 2026-02-20 19:01:21,738 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-20 20:02:22] 2026-02-20 19:01:21,738 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-20 20:02:22] 2026-02-20 19:01:21,738 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-20 20:02:22] 2026-02-20 19:01:21,738 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-20 20:02:22] 2026-02-20 19:01:21,738 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-20 20:02:22] 2026-02-20 19:01:21,738 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-20 20:02:22] 2026-02-20 19:01:21,738 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-20 20:02:22] 2026-02-20 19:01:21,738 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-20 20:02:22] 2026-02-20 19:01:21,738 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-20 20:02:22] 2026-02-20 19:01:21,739 | INFO     | job 7022336191 has completed (purged errors)
[2026-02-20 20:02:22] 2026-02-20 19:01:21,739 | INFO     | overall cleanup function is called
[2026-02-20 20:02:22] 2026-02-20 19:01:22,747 | INFO     | --- collectZombieJob: --- 10, [424637]
[2026-02-20 20:02:22] 2026-02-20 19:01:22,747 | INFO     | zombie collector waiting for pid 424637
[2026-02-20 20:02:22] 2026-02-20 19:01:22,747 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-20 20:02:22] 2026-02-20 19:01:22,747 | INFO     | collected zombie processes
[2026-02-20 20:02:22] 2026-02-20 19:01:22,748 | INFO     | will attempt to kill all subprocesses of pid=424637
[2026-02-20 20:02:22] 2026-02-20 19:01:22,827 | INFO     | process IDs to be killed: [424637] (in reverse order)
[2026-02-20 20:02:22] 2026-02-20 19:01:22,866 | WARNING  | found no corresponding commands to process id(s)
[2026-02-20 20:02:22] 2026-02-20 19:01:22,866 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-20 20:02:22] 2026-02-20 19:01:22,870 | INFO     | did not find any defunct processes belonging to 424637
[2026-02-20 20:02:22] 2026-02-20 19:01:22,874 | INFO     | did not find any defunct processes belonging to 424637
[2026-02-20 20:02:22] 2026-02-20 19:01:22,874 | INFO     | ready for new job
[2026-02-20 20:02:22] 2026-02-20 19:01:22,874 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-20 20:02:22] 2026-02-20 19:01:22,876 | INFO     | **************************************
[2026-02-20 20:02:22] 2026-02-20 19:01:22,876 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-20 20:02:22] 2026-02-20 19:01:22,876 | INFO     | **************************************
[2026-02-20 20:02:22] 2026-02-20 19:01:22,876 | INFO     | 
[2026-02-20 20:02:22] 2026-02-20 19:01:22,877 | INFO     | pilot is running in a VM
[2026-02-20 20:02:22] 2026-02-20 19:01:22,877 | INFO     | architecture information:
[2026-02-20 20:02:22] 2026-02-20 19:01:22,878 | INFO     | executing command: cat /etc/os-release
[2026-02-20 20:02:22] 2026-02-20 19:01:22,892 | INFO     | cat /etc/os-release:
[2026-02-20 20:02:22] NAME="CentOS Linux"
[2026-02-20 20:02:22] VERSION="7 (Core)"
[2026-02-20 20:02:22] ID="centos"
[2026-02-20 20:02:22] ID_LIKE="rhel fedora"
[2026-02-20 20:02:22] VERSION_ID="7"
[2026-02-20 20:02:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-20 20:02:22] ANSI_COLOR="0;31"
[2026-02-20 20:02:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-20 20:02:22] HOME_URL="https://www.centos.org/"
[2026-02-20 20:02:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-20 20:02:22] 
[2026-02-20 20:02:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-20 20:02:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-20 20:02:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-20 20:02:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-20 20:02:22] 
[2026-02-20 20:02:22] 2026-02-20 19:01:22,892 | INFO     | **************************************
[2026-02-20 20:02:22] 2026-02-20 19:01:23,395 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2026-02-20 20:02:22] 2026-02-20 19:01:23,411 | INFO     | sufficient remaining disk space (152213389312 B)
[2026-02-20 20:02:22] 2026-02-20 19:01:23,411 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-20 20:02:22] 2026-02-20 19:01:23,411 | INFO     | current server update state: UPDATING_FINAL
[2026-02-20 20:02:22] 2026-02-20 19:01:23,411 | INFO     | update_server=False
[2026-02-20 20:02:22] 2026-02-20 19:01:23,411 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-20 20:02:22] 2026-02-20 19:01:23,412 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-20 20:02:22] 2026-02-20 19:01:23,412 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-20 20:02:22] 2026-02-20 19:01:23,412 | INFO     | aborting loop
[2026-02-20 20:02:22] 2026-02-20 19:01:23,413 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-20 20:02:22] 2026-02-20 19:01:23,609 | INFO     | all payload control threads have been joined
[2026-02-20 20:02:22] 2026-02-20 19:01:24,226 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-20 20:02:22] 2026-02-20 19:01:24,271 | INFO     | all data control threads have been joined
[2026-02-20 20:02:22] 2026-02-20 19:01:24,418 | INFO     | [job] job monitor thread has finished
[2026-02-20 20:02:22] 2026-02-20 19:01:24,418 | INFO     | [job] retrieve thread has finished
[2026-02-20 20:02:22] 2026-02-20 19:01:24,419 | INFO     | [job] queue monitor thread has finished
[2026-02-20 20:02:22] 2026-02-20 19:01:24,615 | INFO     | [payload] control thread has finished
[2026-02-20 20:02:22] 2026-02-20 19:01:24,633 | INFO     | job.realtimelogging is not enabled
[2026-02-20 20:02:22] 2026-02-20 19:01:24,765 | INFO     | [payload] failed_post thread has finished
[2026-02-20 20:02:22] 2026-02-20 19:01:25,090 | INFO     | [job] validate thread has finished
[2026-02-20 20:02:22] 2026-02-20 19:01:25,110 | INFO     | all job control threads have been joined
[2026-02-20 20:02:22] 2026-02-20 19:01:25,198 | INFO     | [job] create_data_payload thread has finished
[2026-02-20 20:02:22] 2026-02-20 19:01:25,212 | INFO     | [payload] validate_post thread has finished
[2026-02-20 20:02:22] 2026-02-20 19:01:25,260 | INFO     | [payload] validate_pre thread has finished
[2026-02-20 20:02:22] 2026-02-20 19:01:25,274 | INFO     | [data] control thread has finished
[2026-02-20 20:02:22] 2026-02-20 19:01:25,348 | INFO     | [data] copytool_in thread has finished
[2026-02-20 20:02:22] 2026-02-20 19:01:25,638 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-20 20:02:22] 2026-02-20 19:01:25,839 | INFO     | [payload] execute_payloads thread has finished
[2026-02-20 20:02:22] 2026-02-20 19:01:26,115 | INFO     | [job] control thread has finished
[2026-02-20 20:02:22] 2026-02-20 19:01:26,232 | INFO     | [data] copytool_out thread has finished
[2026-02-20 20:02:22] 2026-02-20 19:01:27,419 | INFO     | [data] queue_monitor thread has finished
[2026-02-20 20:02:22] 2026-02-20 19:01:53,071 | INFO     | PID=420141 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-20 20:02:22] 2026-02-20 19:01:53,071 | INFO     | .. there are 2 such processes running
[2026-02-20 20:02:22] 2026-02-20 19:01:53,072 | INFO     | found 0 job(s) in 20 queues
[2026-02-20 20:02:22] 2026-02-20 19:01:53,072 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-20 20:02:22] 2026-02-20 19:01:53,072 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-20 20:02:22] 2026-02-20 19:02:17,150 | INFO     | [monitor] cgroup control has ended
[2026-02-20 20:02:22] 2026-02-20 19:02:17,354 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139228802594624)>', '<ExcThread(monitor, started 139228008675072)>']
[2026-02-20 20:02:22] 2026-02-20 19:02:18,188 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-20 20:02:22] 2026-02-20 19:02:18,189 | INFO     | [monitor] control thread has ended
[2026-02-20 20:02:22] 2026-02-20 19:02:22,380 | INFO     | all workflow threads have been joined
[2026-02-20 20:02:22] 2026-02-20 19:02:22,380 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-20 20:02:22] 2026-02-20 19:02:22,381 | INFO     | traces error code: 0
[2026-02-20 20:02:22] 2026-02-20 19:02:22,381 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-20 20:02:22] 2026-02-20 19:02:22,459 [wrapper] ==== pilot stdout END ====
[2026-02-20 20:02:22] 2026-02-20 19:02:22,464 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-20 20:02:22] 2026-02-20 19:02:22,466 [wrapper] pilotpid: 420141
[2026-02-20 20:02:22] 2026-02-20 19:02:22,469 [wrapper] Pilot exit status: 0
[2026-02-20 20:02:22] 2026-02-20 19:02:22,487 [wrapper] pandaids: 7022336191
[2026-02-20 20:02:22] 2026-02-20 19:02:22,513 [wrapper] cleanup supervisor_pilot  449549 420142
[2026-02-20 20:02:22] 2026-02-20 19:02:22,518 [wrapper] Test setup, not cleaning
[2026-02-20 20:02:22] 2026-02-20 19:02:22,520 [wrapper] apfmon messages muted
[2026-02-20 20:02:22] 2026-02-20 19:02:22,525 [wrapper] ==== wrapper stdout END ====
[2026-02-20 20:02:22] 2026-02-20 19:02:22,529 [wrapper] ==== wrapper stderr END ====
[2026-02-20 20:02:22]  *** Error codes and diagnostics ***
[2026-02-20 20:02:22]     "exeErrorCode": 0,
[2026-02-20 20:02:22]     "exeErrorDiag": "",
[2026-02-20 20:02:22]     "pilotErrorCode": 0,
[2026-02-20 20:02:22]     "pilotErrorDiag": "",
[2026-02-20 20:02:22]  *** Listing of results directory ***
[2026-02-20 20:02:22] insgesamt 947024
[2026-02-20 20:02:22] -rw-r--r-- 1 yeti boinc    584627 Feb 20 02:57 pilot3.tar.gz
[2026-02-20 20:02:22] -rwx------ 1 yeti boinc     36322 Feb 20 03:00 runpilot2-wrapper.sh
[2026-02-20 20:02:22] -rw-r--r-- 1 yeti boinc      5111 Feb 20 03:01 queuedata.json
[2026-02-20 20:02:22] -rw-r--r-- 1 yeti boinc       100 Feb 20 17:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-20 20:02:22] -rwxr-xr-x 1 yeti boinc      7986 Feb 20 17:44 run_atlas
[2026-02-20 20:02:22] -rw-r--r-- 1 yeti boinc       105 Feb 20 17:44 job.xml
[2026-02-20 20:02:22] -rw-r--r-- 2 yeti boinc 678010955 Feb 20 17:44 EVNT.48508760._000692.pool.root.1
[2026-02-20 20:02:22] -rw-r--r-- 2 yeti boinc     15845 Feb 20 17:44 start_atlas.sh
[2026-02-20 20:02:22] drwxrwx--x 2 yeti boinc      4096 Feb 20 17:44 shared
[2026-02-20 20:02:22] -rw-r--r-- 2 yeti boinc    597959 Feb 20 17:44 input.tar.gz
[2026-02-20 20:02:22] -rw-r--r-- 1 yeti boinc      6618 Feb 20 17:44 init_data.xml
[2026-02-20 20:02:22] -rw-r--r-- 1 yeti boinc         0 Feb 20 17:44 boinc_setup_complete
[2026-02-20 20:02:22] -rw-r--r-- 1 yeti boinc         0 Feb 20 17:44 boinc_lockfile
[2026-02-20 20:02:22] -rw-r--r-- 1 yeti boinc      2551 Feb 20 17:44 pandaJob.out
[2026-02-20 20:02:22] -rw------- 1 yeti boinc        52 Feb 20 17:44 setup.sh.local
[2026-02-20 20:02:22] -rw------- 1 yeti boinc   1001572 Feb 20 17:45 agis_schedconf.cvmfs.json
[2026-02-20 20:02:22] -rw------- 1 yeti boinc   1513015 Feb 20 17:45 agis_ddmendpoints.agis.ALL.json
[2026-02-20 20:02:22] -rw------- 1 yeti boinc       419 Feb 20 17:45 workernode_map.json
[2026-02-20 20:02:22] drwx------ 5 yeti boinc      4096 Feb 20 17:45 pilot3
[2026-02-20 20:02:22] -rw------- 1 yeti boinc 284743154 Feb 20 20:00 HITS.48508763._052655.pool.root.1
[2026-02-20 20:02:22] -rw-r--r-- 1 yeti boinc       530 Feb 20 20:00 boinc_task_state.xml
[2026-02-20 20:02:22] -rw------- 1 yeti boinc        95 Feb 20 20:01 pilot_heartbeat.json
[2026-02-20 20:02:22] -rw------- 1 yeti boinc      1023 Feb 20 20:01 memory_monitor_summary.json
[2026-02-20 20:02:22] -rw------- 1 yeti boinc    324777 Feb 20 20:01 log.48508763._052655.job.log.tgz.1
[2026-02-20 20:02:22] -rw------- 1 yeti boinc      6333 Feb 20 20:01 heartbeat.json
[2026-02-20 20:02:22] -rw-r--r-- 1 yeti boinc      8192 Feb 20 20:02 boinc_mmap_file
[2026-02-20 20:02:22] -rw-r--r-- 1 yeti boinc        27 Feb 20 20:02 wrapper_checkpoint.txt
[2026-02-20 20:02:22] -rw------- 1 yeti boinc      4967 Feb 20 20:02 pilotlog.txt
[2026-02-20 20:02:22] -rw------- 1 yeti boinc   1202233 Feb 20 20:02 log.48508763._052655.job.log.1
[2026-02-20 20:02:22] -rw------- 1 yeti boinc       357 Feb 20 20:02 output.list
[2026-02-20 20:02:22] -rw-r--r-- 1 yeti boinc       620 Feb 20 20:02 runtime_log
[2026-02-20 20:02:22] -rw------- 1 yeti boinc   1546240 Feb 20 20:02 result.tar.gz
[2026-02-20 20:02:22] -rw-r--r-- 1 yeti boinc      9544 Feb 20 20:02 runtime_log.err
[2026-02-20 20:02:22] -rw------- 1 yeti boinc       640 Feb 20 20:02 dLTLDmgzUD9n9Rq4apOajLDm4fhM0noT9bVooX4SDmXZxKDmob1ZEo.diag
[2026-02-20 20:02:22] -rw-r--r-- 1 yeti boinc     20925 Feb 20 20:02 stderr.txt
[2026-02-20 20:02:22] HITS file was successfully produced:
[2026-02-20 20:02:22] -rw------- 1 yeti boinc 284743154 Feb 20 20:00 shared/HITS.pool.root.1
[2026-02-20 20:02:22]  *** Contents of shared directory: ***
[2026-02-20 20:02:22] insgesamt 942316
[2026-02-20 20:02:22] -rw-r--r-- 2 yeti boinc 678010955 Feb 20 17:44 ATLAS.root_0
[2026-02-20 20:02:22] -rw-r--r-- 2 yeti boinc     15845 Feb 20 17:44 start_atlas.sh
[2026-02-20 20:02:22] -rw-r--r-- 2 yeti boinc    597959 Feb 20 17:44 input.tar.gz
[2026-02-20 20:02:22] -rw------- 1 yeti boinc 284743154 Feb 20 20:00 HITS.pool.root.1
[2026-02-20 20:02:22] -rw------- 1 yeti boinc   1546240 Feb 20 20:02 result.tar.gz
20:02:23 (416246): run_atlas exited; CPU time 31364.969594
20:02:23 (416246): called boinc_finish(0)

</stderr_txt>
]]>

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