Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:41:45 (4161286): wrapper (7.7.26015): starting
16:41:45 (4161286): wrapper: running run_atlas (--nthreads 4)
[2026-02-20 16:41:45] Arguments: --nthreads 4
[2026-02-20 16:41:45] Threads: 4
[2026-02-20 16:41:45] Checking for CVMFS
[2026-02-20 16:41:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-20 16:41:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-20 16:41:46] Running cvmfs_config stat atlas.cern.ch
[2026-02-20 16:41:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-20 16:41:46] 2.9.2.0 2911421 8226 102624 156452 2 49 28567971 36864001 0 130560 0 3489493 99.986 285246 10240 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-20 16:41:46] CVMFS is ok
[2026-02-20 16:41:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-20 16:41:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-20 16:41:46] Further information can be found at the LHC@home message board.
[2026-02-20 16:41:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-20 16:41:46] Checking for apptainer binary...
[2026-02-20 16:41:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-20 16:41:46] Running /usr/bin/apptainer --version
[2026-02-20 16:41:46] apptainer version 1.4.1-1.1
[2026-02-20 16:41:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-20 16:41:46] thA314a
[2026-02-20 16:41:46] apptainer works
[2026-02-20 16:41:46] Set ATHENA_PROC_NUMBER=4
[2026-02-20 16:41:46] Set ATHENA_CORE_NUMBER=4
[2026-02-20 16:41:46] Starting ATLAS job with PandaID=7021104749
[2026-02-20 16:41:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-20 18:27:16]  *** The last 200 lines of the pilot log: ***
[2026-02-20 18:27:16] 2026-02-20 17:26:46,066 | INFO     | will attempt to kill all subprocesses of pid=4169913
[2026-02-20 18:27:16] 2026-02-20 17:26:46,107 | INFO     | process IDs to be killed: [4169913] (in reverse order)
[2026-02-20 18:27:16] 2026-02-20 17:26:46,138 | WARNING  | found no corresponding commands to process id(s)
[2026-02-20 18:27:16] 2026-02-20 17:26:46,138 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-20 18:27:16] 2026-02-20 17:26:46,140 | INFO     | did not find any defunct processes belonging to 4169913
[2026-02-20 18:27:16] 2026-02-20 17:26:46,141 | INFO     | did not find any defunct processes belonging to 4169913
[2026-02-20 18:27:16] 2026-02-20 17:26:46,141 | INFO     | ready for new job
[2026-02-20 18:27:16] 2026-02-20 17:26:46,141 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-20 18:27:16] 2026-02-20 17:26:46,142 | INFO     | **************************************
[2026-02-20 18:27:16] 2026-02-20 17:26:46,142 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-20 18:27:16] 2026-02-20 17:26:46,142 | INFO     | **************************************
[2026-02-20 18:27:16] 2026-02-20 17:26:46,142 | INFO     | 
[2026-02-20 18:27:16] 2026-02-20 17:26:46,142 | INFO     | architecture information:
[2026-02-20 18:27:16] 2026-02-20 17:26:46,143 | INFO     | executing command: cat /etc/os-release
[2026-02-20 18:27:16] 2026-02-20 17:26:46,156 | INFO     | cat /etc/os-release:
[2026-02-20 18:27:16] NAME="CentOS Linux"
[2026-02-20 18:27:16] VERSION="7 (Core)"
[2026-02-20 18:27:16] ID="centos"
[2026-02-20 18:27:16] ID_LIKE="rhel fedora"
[2026-02-20 18:27:16] VERSION_ID="7"
[2026-02-20 18:27:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-20 18:27:16] ANSI_COLOR="0;31"
[2026-02-20 18:27:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-20 18:27:16] HOME_URL="https://www.centos.org/"
[2026-02-20 18:27:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-20 18:27:16] 
[2026-02-20 18:27:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-20 18:27:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-20 18:27:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-20 18:27:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-20 18:27:16] 
[2026-02-20 18:27:16] 2026-02-20 17:26:46,156 | INFO     | **************************************
[2026-02-20 18:27:16] 2026-02-20 17:26:46,658 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-20 18:27:16] 2026-02-20 17:26:46,673 | INFO     | sufficient remaining disk space (228789846016 B)
[2026-02-20 18:27:16] 2026-02-20 17:26:46,673 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-20 18:27:16] 2026-02-20 17:26:46,673 | INFO     | current server update state: UPDATING_FINAL
[2026-02-20 18:27:16] 2026-02-20 17:26:46,673 | INFO     | update_server=False
[2026-02-20 18:27:16] 2026-02-20 17:26:46,673 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-20 18:27:16] 2026-02-20 17:26:46,673 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-20 18:27:16] 2026-02-20 17:26:46,674 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-20 18:27:16] 2026-02-20 17:26:46,674 | INFO     | aborting loop
[2026-02-20 18:27:16] 2026-02-20 17:26:47,217 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-20 18:27:16] 2026-02-20 17:26:47,242 | INFO     | all payload control threads have been joined
[2026-02-20 18:27:16] 2026-02-20 17:26:47,484 | INFO     | all job control threads have been joined
[2026-02-20 18:27:16] 2026-02-20 17:26:47,679 | INFO     | [job] queue monitor thread has finished
[2026-02-20 18:27:16] 2026-02-20 17:26:47,679 | INFO     | [job] retrieve thread has finished
[2026-02-20 18:27:16] 2026-02-20 17:26:47,680 | INFO     | [job] job monitor thread has finished
[2026-02-20 18:27:16] 2026-02-20 17:26:47,761 | INFO     | all data control threads have been joined
[2026-02-20 18:27:16] 2026-02-20 17:26:47,867 | INFO     | [payload] execute_payloads thread has finished
[2026-02-20 18:27:16] 2026-02-20 17:26:48,137 | INFO     | [job] validate thread has finished
[2026-02-20 18:27:16] 2026-02-20 17:26:48,138 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-20 18:27:16] 2026-02-20 17:26:48,229 | INFO     | [payload] failed_post thread has finished
[2026-02-20 18:27:16] 2026-02-20 17:26:48,247 | INFO     | [payload] control thread has finished
[2026-02-20 18:27:16] 2026-02-20 17:26:48,257 | INFO     | [job] create_data_payload thread has finished
[2026-02-20 18:27:16] 2026-02-20 17:26:48,350 | INFO     | [payload] validate_pre thread has finished
[2026-02-20 18:27:16] 2026-02-20 17:26:48,407 | INFO     | [data] copytool_in thread has finished
[2026-02-20 18:27:16] 2026-02-20 17:26:48,490 | INFO     | [job] control thread has finished
[2026-02-20 18:27:16] 2026-02-20 17:26:48,767 | INFO     | [data] control thread has finished
[2026-02-20 18:27:16] 2026-02-20 17:26:48,813 | INFO     | [payload] validate_post thread has finished
[2026-02-20 18:27:16] 2026-02-20 17:26:49,049 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-20 18:27:16] 2026-02-20 17:26:49,223 | INFO     | [data] copytool_out thread has finished
[2026-02-20 18:27:16] 2026-02-20 17:26:52,145 | INFO     | [data] queue_monitor thread has finished
[2026-02-20 18:27:16] 2026-02-20 17:26:53,389 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-02-20 18:27:16] 2026-02-20 17:27:05,850 | INFO     | [monitor] cgroup control has ended
[2026-02-20 18:27:16] 2026-02-20 17:27:06,442 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139837516797760)>', '<ExcThread(monitor, started 139836711216896)>']
[2026-02-20 18:27:16] 2026-02-20 17:27:11,468 | INFO     | all workflow threads have been joined
[2026-02-20 18:27:16] 2026-02-20 17:27:11,468 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-20 18:27:16] 2026-02-20 17:27:11,468 | INFO     | traces error code: 0
[2026-02-20 18:27:16] 2026-02-20 17:27:11,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-20 18:27:16] 2026-02-20 17:27:16,531 | INFO     | PID=4165397 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-20 18:27:16] 2026-02-20 17:27:16,532 | INFO     | found 0 job(s) in 20 queues
[2026-02-20 18:27:16] 2026-02-20 17:27:16,532 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-20 18:27:16] 2026-02-20 17:27:16,532 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-20 18:27:16] 2026-02-20 17:27:16,532 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-20 18:27:16] 2026-02-20 17:27:16,532 | INFO     | [monitor] control thread has ended
[2026-02-20 18:27:16] 2026-02-20 17:27:16,596 [wrapper] ==== pilot stdout END ====
[2026-02-20 18:27:16] 2026-02-20 17:27:16,600 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-20 18:27:16] 2026-02-20 17:27:16,604 [wrapper] pilotpid: 4165397
[2026-02-20 18:27:16] 2026-02-20 17:27:16,607 [wrapper] Pilot exit status: 0
[2026-02-20 18:27:16] 2026-02-20 17:27:16,618 [wrapper] pandaids: 7021104749
[2026-02-20 18:27:16] 2026-02-20 17:27:16,639 [wrapper] cleanup supervisor_pilot 4175530 4165398
[2026-02-20 18:27:16] 2026-02-20 17:27:16,643 [wrapper] Test setup, not cleaning
[2026-02-20 18:27:16] 2026-02-20 17:27:16,646 [wrapper] apfmon messages muted
[2026-02-20 18:27:16] 2026-02-20 17:27:16,650 [wrapper] ==== wrapper stdout END ====
[2026-02-20 18:27:16] 2026-02-20 17:27:16,653 [wrapper] ==== wrapper stderr END ====
[2026-02-20 18:27:16]  *** Error codes and diagnostics ***
[2026-02-20 18:27:16]     "exeErrorCode": 0,
[2026-02-20 18:27:16]     "exeErrorDiag": "",
[2026-02-20 18:27:16]     "pilotErrorCode": 0,
[2026-02-20 18:27:16]     "pilotErrorDiag": "",
[2026-02-20 18:27:16]  *** Listing of results directory ***
[2026-02-20 18:27:16] total 944372
[2026-02-20 18:27:16] -rw-r--r-- 1 boinc boinc    584627 Feb 19 06:33 pilot3.tar.gz
[2026-02-20 18:27:16] -rwx------ 1 boinc boinc     36322 Feb 19 06:36 runpilot2-wrapper.sh
[2026-02-20 18:27:16] -rw-r--r-- 1 boinc boinc      5111 Feb 19 06:41 queuedata.json
[2026-02-20 18:27:16] -rw-r--r-- 1 boinc boinc       100 Feb 20 16:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-20 18:27:16] -rwxr-xr-x 1 boinc boinc      7986 Feb 20 16:41 run_atlas
[2026-02-20 18:27:16] -rw-r--r-- 1 boinc boinc       105 Feb 20 16:41 job.xml
[2026-02-20 18:27:16] -rw-r--r-- 2 boinc boinc 681457011 Feb 20 16:41 EVNT.48508760._000802.pool.root.1
[2026-02-20 18:27:16] -rw-r--r-- 2 boinc boinc    597951 Feb 20 16:41 input.tar.gz
[2026-02-20 18:27:16] -rw-r--r-- 2 boinc boinc     15845 Feb 20 16:41 start_atlas.sh
[2026-02-20 18:27:16] drwxrwx--x 2 boinc boinc      4096 Feb 20 16:41 shared
[2026-02-20 18:27:16] -rw-r--r-- 1 boinc boinc         0 Feb 20 16:41 boinc_setup_complete
[2026-02-20 18:27:16] -rw-r--r-- 1 boinc boinc      6371 Feb 20 16:41 init_data.xml
[2026-02-20 18:27:16] -rw-r--r-- 1 boinc boinc         0 Feb 20 16:41 boinc_lockfile
[2026-02-20 18:27:16] -rw-r--r-- 1 boinc boinc      2552 Feb 20 16:41 pandaJob.out
[2026-02-20 18:27:16] -rw------- 1 boinc boinc   1001572 Feb 20 16:41 agis_schedconf.cvmfs.json
[2026-02-20 18:27:16] -rw------- 1 boinc boinc   1513015 Feb 20 16:41 agis_ddmendpoints.agis.ALL.json
[2026-02-20 18:27:16] -rw------- 1 boinc boinc       422 Feb 20 16:41 workernode_map.json
[2026-02-20 18:27:16] drwx------ 5 boinc boinc      4096 Feb 20 16:41 pilot3
[2026-02-20 18:27:16] -rw------- 1 boinc boinc 279242534 Feb 20 18:26 HITS.48508763._041845.pool.root.1
[2026-02-20 18:27:16] -rw-r--r-- 1 boinc boinc       530 Feb 20 18:26 boinc_task_state.xml
[2026-02-20 18:27:16] -rw------- 1 boinc boinc        95 Feb 20 18:26 pilot_heartbeat.json
[2026-02-20 18:27:16] -rw------- 1 boinc boinc      1019 Feb 20 18:26 memory_monitor_summary.json
[2026-02-20 18:27:16] -rw------- 1 boinc boinc    298998 Feb 20 18:26 log.48508763._041845.job.log.tgz.1
[2026-02-20 18:27:16] -rw------- 1 boinc boinc      6310 Feb 20 18:26 heartbeat.json
[2026-02-20 18:27:16] -rw-r--r-- 1 boinc boinc      8192 Feb 20 18:27 boinc_mmap_file
[2026-02-20 18:27:16] -rw-r--r-- 1 boinc boinc        27 Feb 20 18:27 wrapper_checkpoint.txt
[2026-02-20 18:27:16] -rw------- 1 boinc boinc       747 Feb 20 18:27 pilotlog.txt
[2026-02-20 18:27:16] -rw------- 1 boinc boinc    909487 Feb 20 18:27 log.48508763._041845.job.log.1
[2026-02-20 18:27:16] -rw------- 1 boinc boinc       357 Feb 20 18:27 output.list
[2026-02-20 18:27:16] -rw-r--r-- 1 boinc boinc       620 Feb 20 18:27 runtime_log
[2026-02-20 18:27:16] -rw------- 1 boinc boinc   1228800 Feb 20 18:27 result.tar.gz
[2026-02-20 18:27:16] -rw------- 1 boinc boinc       658 Feb 20 18:27 zT6MDmktBD9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwZxKDmWpRzHn.diag
[2026-02-20 18:27:16] -rw-r--r-- 1 boinc boinc      8901 Feb 20 18:27 runtime_log.err
[2026-02-20 18:27:16] -rw-r--r-- 1 boinc boinc     10295 Feb 20 18:27 stderr.txt
[2026-02-20 18:27:16] HITS file was successfully produced:
[2026-02-20 18:27:16] -rw------- 1 boinc boinc 279242534 Feb 20 18:26 shared/HITS.pool.root.1
[2026-02-20 18:27:16]  *** Contents of shared directory: ***
[2026-02-20 18:27:16] total 939996
[2026-02-20 18:27:16] -rw-r--r-- 2 boinc boinc 681457011 Feb 20 16:41 ATLAS.root_0
[2026-02-20 18:27:16] -rw-r--r-- 2 boinc boinc    597951 Feb 20 16:41 input.tar.gz
[2026-02-20 18:27:16] -rw-r--r-- 2 boinc boinc     15845 Feb 20 16:41 start_atlas.sh
[2026-02-20 18:27:16] -rw------- 1 boinc boinc 279242534 Feb 20 18:26 HITS.pool.root.1
[2026-02-20 18:27:16] -rw------- 1 boinc boinc   1228800 Feb 20 18:27 result.tar.gz
18:27:18 (4161286): run_atlas exited; CPU time 23881.529381
18:27:18 (4161286): called boinc_finish(0)

</stderr_txt>
]]>

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