Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:37:47 (1981960): wrapper (7.7.26015): starting
23:37:47 (1981960): wrapper: running run_atlas (--nthreads 8)
[2026-02-19 23:37:47] Arguments: --nthreads 8
[2026-02-19 23:37:47] Threads: 8
[2026-02-19 23:37:47] Checking for CVMFS
[2026-02-19 23:37:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-19 23:37:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-19 23:37:49] Running cvmfs_config stat atlas.cern.ch
[2026-02-19 23:37:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-19 23:37:50] 2.11.3.0 4062081 116844 167200 156438 3 602 33264725 45568000 12883 130560 0 644345325 99.812 349157032 18304 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-02-19 23:37:50] CVMFS is ok
[2026-02-19 23:37:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-19 23:37:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-19 23:37:50] Further information can be found at the LHC@home message board.
[2026-02-19 23:37:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-19 23:37:50] Checking for apptainer binary...
[2026-02-19 23:37:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-19 23:37:50] Running /usr/bin/apptainer --version
[2026-02-19 23:37:54] apptainer version 1.4.1-1.el9
[2026-02-19 23:37:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-19 23:38:05] wns0019.triumf.lcg
[2026-02-19 23:38:05] apptainer works
[2026-02-19 23:38:05] Set ATHENA_PROC_NUMBER=8
[2026-02-19 23:38:05] Set ATHENA_CORE_NUMBER=8
[2026-02-19 23:38:05] Starting ATLAS job with PandaID=7021329742
[2026-02-19 23:38:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-19 23:43:48]  *** The last 200 lines of the pilot log: ***
[2026-02-19 23:43:54] 2026-02-20 07:42:35,939 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-19 23:43:54] 2026-02-20 07:42:35,940 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-19 23:43:54] 2026-02-20 07:42:35,940 | WARNING  | wrong length of table data, x=[1771573154.0, 1771573215.0], y=[1037.0, 401618.0] (must be same and length>=4)
[2026-02-19 23:43:54] 2026-02-20 07:42:35,940 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | ..............................
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . Timing measurements:
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . get job = 0 s
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . initial setup = 9 s
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . payload setup = 20 s
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . stage-in = 0 s
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . payload execution = 85 s
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . stage-out = 3 s
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . log creation = 3 s
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | ..............................
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7021329742/pilotlog.txt
[2026-02-19 23:43:54] 2026-02-20 07:42:35,998 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-19 23:43:54] - Log from pilotlog.txt -
[2026-02-19 23:43:54] 2026-02-20 07:42:35,938 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7021329742/memory_monitor_summary.json (trf name=prmon)
[2026-02-19 23:43:54] 2026-02-20 07:42:35,939 | INFO     | extracted standard info from prmon json
[2026-02-19 23:43:54] 2026-02-20 07:42:35,939 | INFO     | extracted standard memory fields from prmon json
[2026-02-19 23:43:54] 2026-02-20 07:42:35,939 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-19 23:43:54] 2026-02-20 07:42:35,939 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-19 23:43:54] 2026-02-20 07:42:35,940 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-19 23:43:54] 2026-02-20 07:42:35,940 | WARNING  | wrong length of table data, x=[1771573154.0, 1771573215.0], y=[1037.0, 401618.0] (must be same and length>=4)
[2026-02-19 23:43:54] 2026-02-20 07:42:35,940 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | ..............................
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . Timing measurements:
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . get job = 0 s
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . initial setup = 9 s
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . payload setup = 20 s
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . stage-in = 0 s
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . payload execution = 85 s
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . stage-out = 3 s
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . log creation = 3 s
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | ..............................
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7021329742/pilotlog.txt
[2026-02-19 23:43:54] 2026-02-20 07:42:35,998 | WARNING  | 
[2026-02-19 23:43:54] [begin log extracts]
[2026-02-19 23:43:54] - Log from pilotlog.txt -
[2026-02-19 23:43:54] 2026-02-20 07:42:35,938 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7021329742/memory_monitor_summary.json (trf name=prmon)
[2026-02-19 23:43:54] 2026-02-20 07:42:35,939 | INFO     | extracted standard info from prmon json
[2026-02-19 23:43:54] 2026-02-20 07:42:35,939 | INFO     | extracted standard memory fields from prmon json
[2026-02-19 23:43:54] 2026-02-20 07:42:35,939 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-19 23:43:54] 2026-02-20 07:42:35,939 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-19 23:43:54] 2026-02-20 07:42:35,940 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-19 23:43:54] 2026-02-20 07:42:35,940 | WARNING  | wrong length of table data, x=[1771573154.0, 1771573215.0], y=[1037.0, 401618.0] (must be same and length>=4)
[2026-02-19 23:43:54] 2026-02-20 07:42:35,940 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | ..............................
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . Timing measurements:
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . get job = 0 s
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . initial setup = 9 s
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . payload setup = 20 s
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . stage-in = 0 s
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . payload execution = 85 s
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . stage-out = 3 s
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | . log creation = 3 s
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | ..............................
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-19 23:43:54] 2026-02-20 07:42:35,941 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7021329742/pilotlog.txt
[2026-02-19 23:43:54] [end log extracts]
[2026-02-19 23:43:54] 2026-02-20 07:42:35,998 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-19 23:43:54] 2026-02-20 07:42:35,999 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-19 23:43:54] 2026-02-20 07:42:36,197 | INFO     | time since job start (239s) is within the limit (349056.0s)
[2026-02-19 23:43:54] 2026-02-20 07:42:36,221 | INFO     | 
[2026-02-19 23:43:54] 2026-02-20 07:42:36,221 | INFO     | job summary report
[2026-02-19 23:43:54] 2026-02-20 07:42:36,222 | INFO     | --------------------------------------------------
[2026-02-19 23:43:54] 2026-02-20 07:42:36,222 | INFO     | PanDA job id: 7021329742
[2026-02-19 23:43:54] 2026-02-20 07:42:36,222 | INFO     | task id: 48700946
[2026-02-19 23:43:54] 2026-02-20 07:42:36,222 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-19 23:40:29,448 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-19 23:43:54] 2026-02-20 07:42:36,222 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-19 23:43:54] 2026-02-20 07:42:36,222 | INFO     | pilot state: failed 
[2026-02-19 23:43:54] 2026-02-20 07:42:36,222 | INFO     | transexitcode: 65
[2026-02-19 23:43:54] 2026-02-20 07:42:36,222 | INFO     | exeerrorcode: 65
[2026-02-19 23:43:54] 2026-02-20 07:42:36,222 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-19 23:43:54] 2026-02-20 07:42:36,222 | INFO     | exitcode: 65
[2026-02-19 23:43:54] 2026-02-20 07:42:36,222 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-19 23:43:54] 2026-02-20 07:42:36,222 | INFO     | cpuconsumptiontime: 15 s
[2026-02-19 23:43:54] 2026-02-20 07:42:36,222 | INFO     | nevents: 0
[2026-02-19 23:43:54] 2026-02-20 07:42:36,223 | INFO     | neventsw: 0
[2026-02-19 23:43:54] 2026-02-20 07:42:36,223 | INFO     | pid: 1993231
[2026-02-19 23:43:54] 2026-02-20 07:42:36,223 | INFO     | pgrp: 1993231
[2026-02-19 23:43:54] 2026-02-20 07:42:36,223 | INFO     | corecount: 8
[2026-02-19 23:43:54] 2026-02-20 07:42:36,223 | INFO     | event service: False
[2026-02-19 23:43:54] 2026-02-20 07:42:36,223 | INFO     | sizes: {0: 2281779, 1: 2282240, 11: 2282240, 107: 2305513, 108: 2305489, 112: 2309809, 113: 2309993, 228: 2310159}
[2026-02-19 23:43:54] 2026-02-20 07:42:36,223 | INFO     | --------------------------------------------------
[2026-02-19 23:43:54] 2026-02-20 07:42:36,223 | INFO     | 
[2026-02-19 23:43:54] 2026-02-20 07:42:36,223 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-19 23:43:54] 2026-02-20 07:42:36,345 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-19 23:43:54] 2026-02-20 07:42:36,346 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-19 23:43:54] 2026-02-20 07:42:36,346 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-19 23:43:54] 2026-02-20 07:42:36,346 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-19 23:43:54] 2026-02-20 07:42:36,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-19 23:43:54] 2026-02-20 07:42:36,346 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-19 23:43:54] 2026-02-20 07:42:36,346 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-19 23:43:54] 2026-02-20 07:42:36,346 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-19 23:43:54] 2026-02-20 07:42:36,346 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-19 23:43:54] 2026-02-20 07:42:36,346 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-19 23:43:54] 2026-02-20 07:42:36,346 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-19 23:43:54] 2026-02-20 07:42:36,346 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-19 23:43:54] 2026-02-20 07:42:36,346 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-19 23:43:54] 2026-02-20 07:42:36,347 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-19 23:43:54] 2026-02-20 07:42:36,347 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-19 23:43:54] 2026-02-20 07:42:36,347 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-19 23:43:54] 2026-02-20 07:42:36,347 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-19 23:43:54] 2026-02-20 07:42:36,347 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-19 23:43:54] 2026-02-20 07:42:36,347 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-19 23:43:54] 2026-02-20 07:42:36,347 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-19 23:43:54] 2026-02-20 07:42:36,347 | INFO     | job 7021329742 has completed (purged errors)
[2026-02-19 23:43:54] 2026-02-20 07:42:36,347 | INFO     | overall cleanup function is called
[2026-02-19 23:43:54] 2026-02-20 07:42:37,353 | INFO     | --- collectZombieJob: --- 10, [1993231]
[2026-02-19 23:43:54] 2026-02-20 07:42:37,353 | INFO     | zombie collector waiting for pid 1993231
[2026-02-19 23:43:54] 2026-02-20 07:42:37,353 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-19 23:43:54] 2026-02-20 07:42:37,353 | INFO     | collected zombie processes
[2026-02-19 23:43:54] 2026-02-20 07:42:37,353 | INFO     | will attempt to kill all subprocesses of pid=1993231
[2026-02-19 23:43:54] 2026-02-20 07:42:37,565 | INFO     | process IDs to be killed: [1993231] (in reverse order)
[2026-02-19 23:43:54] 2026-02-20 07:42:37,714 | WARNING  | found no corresponding commands to process id(s)
[2026-02-19 23:43:54] 2026-02-20 07:42:37,715 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-19 23:43:54] 2026-02-20 07:42:37,723 | INFO     | did not find any defunct processes belonging to 1993231
[2026-02-19 23:43:54] 2026-02-20 07:42:37,730 | INFO     | did not find any defunct processes belonging to 1993231
[2026-02-19 23:43:54] 2026-02-20 07:42:37,731 | INFO     | ready for new job
[2026-02-19 23:43:54] 2026-02-20 07:42:37,731 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-19 23:43:54] 2026-02-20 07:42:37,732 | INFO     | **************************************
[2026-02-19 23:43:54] 2026-02-20 07:42:37,732 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-19 23:43:54] 2026-02-20 07:42:37,732 | INFO     | **************************************
[2026-02-19 23:43:54] 2026-02-20 07:42:37,733 | INFO     | 
[2026-02-19 23:43:54] 2026-02-20 07:42:37,734 | INFO     | architecture information:
[2026-02-19 23:43:54] 2026-02-20 07:42:37,734 | INFO     | executing command: cat /etc/os-release
[2026-02-19 23:43:54] 2026-02-20 07:42:37,760 | INFO     | cat /etc/os-release:
[2026-02-19 23:43:54] NAME="CentOS Linux"
[2026-02-19 23:43:54] VERSION="7 (Core)"
[2026-02-19 23:43:54] ID="centos"
[2026-02-19 23:43:54] ID_LIKE="rhel fedora"
[2026-02-19 23:43:54] VERSION_ID="7"
[2026-02-19 23:43:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-19 23:43:54] ANSI_COLOR="0;31"
[2026-02-19 23:43:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-19 23:43:54] HOME_URL="https://www.centos.org/"
[2026-02-19 23:43:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-19 23:43:54] 
[2026-02-19 23:43:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-19 23:43:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-19 23:43:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-19 23:43:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-19 23:43:54] 
[2026-02-19 23:43:54] 2026-02-20 07:42:37,760 | INFO     | **************************************
[2026-02-19 23:43:54] 2026-02-20 07:42:38,263 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-19 23:43:54] 2026-02-20 07:42:38,287 | INFO     | sufficient remaining disk space (1161710010368 B)
[2026-02-19 23:43:54] 2026-02-20 07:42:38,287 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-19 23:43:54] 2026-02-20 07:42:38,287 | INFO     | current server update state: UPDATING_FINAL
[2026-02-19 23:43:54] 2026-02-20 07:42:38,287 | INFO     | update_server=False
[2026-02-19 23:43:54] 2026-02-20 07:42:38,287 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-19 23:43:54] 2026-02-20 07:42:38,288 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-19 23:43:54] 2026-02-20 07:42:38,288 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-19 23:43:54] 2026-02-20 07:42:38,288 | INFO     | aborting loop
[2026-02-19 23:43:54] 2026-02-20 07:42:38,617 | INFO     | all data control threads have been joined
[2026-02-19 23:43:54] 2026-02-20 07:42:39,234 | INFO     | all job control threads have been joined
[2026-02-19 23:43:54] 2026-02-20 07:42:39,239 | INFO     | all payload control threads have been joined
[2026-02-19 23:43:54] 2026-02-20 07:42:39,292 | INFO     | [job] retrieve thread has finished
[2026-02-19 23:43:54] 2026-02-20 07:42:39,294 | INFO     | [job] job monitor thread has finished
[2026-02-19 23:43:54] 2026-02-20 07:42:39,462 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-19 23:43:54] 2026-02-20 07:42:39,563 | INFO     | [data] copytool_in thread has finished
[2026-02-19 23:43:54] 2026-02-20 07:42:39,622 | INFO     | [data] control thread has finished
[2026-02-19 23:43:54] 2026-02-20 07:42:39,718 | INFO     | [payload] validate_post thread has finished
[2026-02-19 23:43:54] 2026-02-20 07:42:39,913 | INFO     | [payload] execute_payloads thread has finished
[2026-02-19 23:43:54] 2026-02-20 07:42:40,108 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-19 23:43:54] 2026-02-20 07:42:40,239 | INFO     | [job] control thread has finished
[2026-02-19 23:43:54] 2026-02-20 07:42:40,244 | INFO     | [payload] control thread has finished
[2026-02-19 23:43:54] 2026-02-20 07:42:40,294 | INFO     | [data] copytool_out thread has finished
[2026-02-19 23:43:54] 2026-02-20 07:42:40,298 | INFO     | [payload] failed_post thread has finished
[2026-02-19 23:43:54] 2026-02-20 07:42:40,425 | INFO     | [job] validate thread has finished
[2026-02-19 23:43:54] 2026-02-20 07:42:40,602 | INFO     | [job] create_data_payload thread has finished
[2026-02-19 23:43:54] 2026-02-20 07:42:40,749 | INFO     | [payload] validate_pre thread has finished
[2026-02-19 23:43:54] 2026-02-20 07:42:41,111 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-19 23:43:54] 2026-02-20 07:42:42,116 | INFO     | [job] queue monitor thread has finished
[2026-02-19 23:43:54] 2026-02-20 07:42:43,467 | INFO     | [data] queue_monitor thread has finished
[2026-02-19 23:43:54] 2026-02-20 07:43:09,580 | INFO     | PID=1985859 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-19 23:43:54] 2026-02-20 07:43:09,581 | INFO     | .. there are 32 such processes running
[2026-02-19 23:43:54] 2026-02-20 07:43:09,581 | INFO     | found 0 job(s) in 20 queues
[2026-02-19 23:43:54] 2026-02-20 07:43:09,581 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-19 23:43:54] 2026-02-20 07:43:09,581 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-19 23:43:54] 2026-02-20 07:43:37,110 | INFO     | [monitor] cgroup control has ended
[2026-02-19 23:43:54] 2026-02-20 07:43:38,826 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140255841453888)>', '<ExcThread(monitor, started 140255151769344)>']
[2026-02-19 23:43:54] 2026-02-20 07:43:39,728 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-19 23:43:54] 2026-02-20 07:43:39,728 | INFO     | [monitor] control thread has ended
[2026-02-19 23:43:54] 2026-02-20 07:43:43,851 | INFO     | all workflow threads have been joined
[2026-02-19 23:43:54] 2026-02-20 07:43:43,852 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-19 23:43:54] 2026-02-20 07:43:43,852 | INFO     | traces error code: 0
[2026-02-19 23:43:54] 2026-02-20 07:43:43,852 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-19 23:43:54] 2026-02-20 07:43:44,034 [wrapper] ==== pilot stdout END ====
[2026-02-19 23:43:54] 2026-02-20 07:43:44,037 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-19 23:43:54] 2026-02-20 07:43:44,039 [wrapper] pilotpid: 1985859
[2026-02-19 23:43:54] 2026-02-20 07:43:44,042 [wrapper] Pilot exit status: 0
[2026-02-19 23:43:54] 2026-02-20 07:43:45,194 [wrapper] pandaids: 7021329742
[2026-02-19 23:43:54] 2026-02-20 07:43:45,243 [wrapper] cleanup supervisor_pilot 1985865 1985860
[2026-02-19 23:43:54] 2026-02-20 07:43:45,246 [wrapper] Test setup, not cleaning
[2026-02-19 23:43:54] 2026-02-20 07:43:45,247 [wrapper] apfmon messages muted
[2026-02-19 23:43:54] 2026-02-20 07:43:45,249 [wrapper] ==== wrapper stdout END ====
[2026-02-19 23:43:54] 2026-02-20 07:43:45,251 [wrapper] ==== wrapper stderr END ====
[2026-02-19 23:43:54]  *** Error codes and diagnostics ***
[2026-02-19 23:43:54]     "exeErrorCode": 65,
[2026-02-19 23:43:54]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-19 23:43:54]     "pilotErrorCode": 1305,
[2026-02-19 23:43:54]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-19 23:43:54]  *** Listing of results directory ***
[2026-02-19 23:43:54] total 189068
[2026-02-19 23:43:54] -rw-r--r--. 1 boinc boinc    584627 Feb 19 13:53 pilot3.tar.gz
[2026-02-19 23:43:54] -rwx------. 1 boinc boinc     36322 Feb 19 13:58 runpilot2-wrapper.sh
[2026-02-19 23:43:54] -rw-r--r--. 1 boinc boinc      5111 Feb 19 14:00 queuedata.json
[2026-02-19 23:43:54] -rw-r--r--. 1 boinc boinc       100 Feb 19 23:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-19 23:43:54] -rwxr-xr-x. 1 boinc boinc      7986 Feb 19 23:27 run_atlas
[2026-02-19 23:43:54] -rw-r--r--. 1 boinc boinc       105 Feb 19 23:27 job.xml
[2026-02-19 23:43:54] -rw-r--r--. 2 boinc boinc 189451453 Feb 19 23:37 EVNT.48700944._000013.pool.root.1
[2026-02-19 23:43:54] -rw-r--r--. 1 boinc boinc      6444 Feb 19 23:37 init_data.xml
[2026-02-19 23:43:54] drwxrwx--x. 2 boinc boinc      4096 Feb 19 23:37 shared
[2026-02-19 23:43:54] -rw-r--r--. 2 boinc boinc    597943 Feb 19 23:37 input.tar.gz
[2026-02-19 23:43:54] -rw-r--r--. 2 boinc boinc     15845 Feb 19 23:37 start_atlas.sh
[2026-02-19 23:43:54] -rw-r--r--. 1 boinc boinc         0 Feb 19 23:37 boinc_lockfile
[2026-02-19 23:43:54] -rw-r--r--. 1 boinc boinc      2524 Feb 19 23:38 pandaJob.out
[2026-02-19 23:43:54] -rw-------. 1 boinc boinc   1001567 Feb 19 23:38 agis_schedconf.cvmfs.json
[2026-02-19 23:43:54] -rw-------. 1 boinc boinc   1513015 Feb 19 23:38 agis_ddmendpoints.agis.ALL.json
[2026-02-19 23:43:54] -rw-------. 1 boinc boinc       442 Feb 19 23:38 workernode_map.json
[2026-02-19 23:43:54] drwx------. 5 boinc boinc      4096 Feb 19 23:38 pilot3
[2026-02-19 23:43:54] -rw-r--r--. 1 boinc boinc       524 Feb 19 23:40 boinc_task_state.xml
[2026-02-19 23:43:54] -rw-------. 1 boinc boinc      1008 Feb 19 23:40 memory_monitor_summary.json
[2026-02-19 23:43:54] -rw-------. 1 boinc boinc     22167 Feb 19 23:40 log.48700946._000312.job.log.tgz.1
[2026-02-19 23:43:54] -rw-------. 1 boinc boinc        95 Feb 19 23:42 pilot_heartbeat.json
[2026-02-19 23:43:54] -rw-------. 1 boinc boinc      7060 Feb 19 23:42 heartbeat.json
[2026-02-19 23:43:54] -rw-------. 1 boinc boinc      4819 Feb 19 23:43 pilotlog.txt
[2026-02-19 23:43:54] -rw-------. 1 boinc boinc     89482 Feb 19 23:43 log.48700946._000312.job.log.1
[2026-02-19 23:43:54] -rw-------. 1 boinc boinc       188 Feb 19 23:43 output.list
[2026-02-19 23:43:54] -rw-r--r--. 1 boinc boinc       620 Feb 19 23:43 runtime_log
[2026-02-19 23:43:54] -rw-------. 1 boinc boinc    133120 Feb 19 23:43 result.tar.gz
[2026-02-19 23:43:54] -rw-r--r--. 1 boinc boinc      8633 Feb 19 23:43 runtime_log.err
[2026-02-19 23:43:54] -rw-------. 1 boinc boinc       647 Feb 19 23:43 NnvKDmPDRD9n9Rq4apOajLDm4fhM0noT9bVooX4SDmGTxKDmIO4CVn.diag
[2026-02-19 23:43:54] -rw-r--r--. 1 boinc boinc      8192 Feb 19 23:43 boinc_mmap_file
[2026-02-19 23:43:54] -rw-r--r--. 1 boinc boinc        23 Feb 19 23:43 wrapper_checkpoint.txt
[2026-02-19 23:43:54] -rw-r--r--. 1 boinc boinc     21880 Feb 19 23:43 stderr.txt
[2026-02-19 23:43:54] No HITS result produced
[2026-02-19 23:43:54]  *** Contents of shared directory: ***
[2026-02-19 23:43:54] total 185748
[2026-02-19 23:43:54] -rw-r--r--. 2 boinc boinc 189451453 Feb 19 23:37 ATLAS.root_0
[2026-02-19 23:43:54] -rw-r--r--. 2 boinc boinc    597943 Feb 19 23:37 input.tar.gz
[2026-02-19 23:43:54] -rw-r--r--. 2 boinc boinc     15845 Feb 19 23:37 start_atlas.sh
[2026-02-19 23:43:54] -rw-------. 1 boinc boinc    133120 Feb 19 23:43 result.tar.gz
23:43:56 (1981960): run_atlas exited; CPU time 20.601570
23:43:56 (1981960): called boinc_finish(0)

</stderr_txt>
]]>

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