Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:38:27 (2046693): wrapper (7.7.26015): starting
11:38:27 (2046693): wrapper: running run_atlas (--nthreads 4)
[2026-02-20 11:38:27] Arguments: --nthreads 4
[2026-02-20 11:38:27] Threads: 4
[2026-02-20 11:38:27] Checking for CVMFS
[2026-02-20 11:38:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-20 11:38:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-20 11:38:28] Running cvmfs_config stat atlas.cern.ch
[2026-02-20 11:38:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-20 11:38:28] 2.9.2.0 872034 7952 104028 156444 2 50 26858005 36864000 0 130560 0 3292039 99.985 275342 10626 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-20 11:38:28] CVMFS is ok
[2026-02-20 11:38:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-20 11:38:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-20 11:38:28] Further information can be found at the LHC@home message board.
[2026-02-20 11:38:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-20 11:38:28] Checking for apptainer binary...
[2026-02-20 11:38:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-20 11:38:28] Running /usr/bin/apptainer --version
[2026-02-20 11:38:28] apptainer version 1.4.1-1.1
[2026-02-20 11:38:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-20 11:38:28] thA334
[2026-02-20 11:38:28] apptainer works
[2026-02-20 11:38:28] Set ATHENA_PROC_NUMBER=4
[2026-02-20 11:38:28] Set ATHENA_CORE_NUMBER=4
[2026-02-20 11:38:28] Starting ATLAS job with PandaID=7021116487
[2026-02-20 11:38:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-20 13:23:53]  *** The last 200 lines of the pilot log: ***
[2026-02-20 13:23:53] 2026-02-20 12:23:28,715 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-20 13:23:53] 2026-02-20 12:23:28,717 | INFO     | did not find any defunct processes belonging to 2055301
[2026-02-20 13:23:53] 2026-02-20 12:23:28,718 | INFO     | did not find any defunct processes belonging to 2055301
[2026-02-20 13:23:53] 2026-02-20 12:23:28,718 | INFO     | ready for new job
[2026-02-20 13:23:53] 2026-02-20 12:23:28,718 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-20 13:23:53] 2026-02-20 12:23:28,719 | INFO     | **************************************
[2026-02-20 13:23:53] 2026-02-20 12:23:28,719 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-20 13:23:53] 2026-02-20 12:23:28,719 | INFO     | **************************************
[2026-02-20 13:23:53] 2026-02-20 12:23:28,719 | INFO     | 
[2026-02-20 13:23:53] 2026-02-20 12:23:28,719 | INFO     | architecture information:
[2026-02-20 13:23:53] 2026-02-20 12:23:28,719 | INFO     | executing command: cat /etc/os-release
[2026-02-20 13:23:53] 2026-02-20 12:23:28,732 | INFO     | cat /etc/os-release:
[2026-02-20 13:23:53] NAME="CentOS Linux"
[2026-02-20 13:23:53] VERSION="7 (Core)"
[2026-02-20 13:23:53] ID="centos"
[2026-02-20 13:23:53] ID_LIKE="rhel fedora"
[2026-02-20 13:23:53] VERSION_ID="7"
[2026-02-20 13:23:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-20 13:23:53] ANSI_COLOR="0;31"
[2026-02-20 13:23:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-20 13:23:53] HOME_URL="https://www.centos.org/"
[2026-02-20 13:23:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-20 13:23:53] 
[2026-02-20 13:23:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-20 13:23:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-20 13:23:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-20 13:23:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-20 13:23:53] 
[2026-02-20 13:23:53] 2026-02-20 12:23:28,732 | INFO     | **************************************
[2026-02-20 13:23:53] 2026-02-20 12:23:29,236 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-20 13:23:53] 2026-02-20 12:23:29,253 | INFO     | sufficient remaining disk space (229171527680 B)
[2026-02-20 13:23:53] 2026-02-20 12:23:29,253 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-20 13:23:53] 2026-02-20 12:23:29,253 | INFO     | current server update state: UPDATING_FINAL
[2026-02-20 13:23:53] 2026-02-20 12:23:29,253 | INFO     | update_server=False
[2026-02-20 13:23:53] 2026-02-20 12:23:29,253 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-20 13:23:53] 2026-02-20 12:23:29,253 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-20 13:23:53] 2026-02-20 12:23:29,253 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-20 13:23:53] 2026-02-20 12:23:29,254 | INFO     | found 0 job(s) in 20 queues
[2026-02-20 13:23:53] 2026-02-20 12:23:29,254 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-20 13:23:53] 2026-02-20 12:23:29,254 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-20 13:23:53] 2026-02-20 12:23:29,362 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-20 13:23:53] 2026-02-20 12:23:29,362 | INFO     | aborting loop
[2026-02-20 13:23:53] 2026-02-20 12:23:29,362 | INFO     | all job control threads have been joined
[2026-02-20 13:23:53] 2026-02-20 12:23:29,654 | INFO     | all data control threads have been joined
[2026-02-20 13:23:53] 2026-02-20 12:23:30,090 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-20 13:23:53] 2026-02-20 12:23:30,259 | INFO     | [job] retrieve thread has finished
[2026-02-20 13:23:53] 2026-02-20 12:23:30,268 | INFO     | [job] create_data_payload thread has finished
[2026-02-20 13:23:53] 2026-02-20 12:23:30,305 | INFO     | [payload] failed_post thread has finished
[2026-02-20 13:23:53] 2026-02-20 12:23:30,337 | INFO     | [payload] validate_pre thread has finished
[2026-02-20 13:23:53] 2026-02-20 12:23:30,365 | INFO     | [job] control thread has finished
[2026-02-20 13:23:53] 2026-02-20 12:23:30,367 | INFO     | [job] job monitor thread has finished
[2026-02-20 13:23:53] 2026-02-20 12:23:30,370 | INFO     | [data] copytool_in thread has finished
[2026-02-20 13:23:53] 2026-02-20 12:23:30,658 | INFO     | [data] control thread has finished
[2026-02-20 13:23:53] 2026-02-20 12:23:30,671 | INFO     | all payload control threads have been joined
[2026-02-20 13:23:53] 2026-02-20 12:23:31,002 | INFO     | [payload] execute_payloads thread has finished
[2026-02-20 13:23:53] 2026-02-20 12:23:31,111 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-20 13:23:53] 2026-02-20 12:23:31,259 | INFO     | [data] copytool_out thread has finished
[2026-02-20 13:23:53] 2026-02-20 12:23:31,537 | INFO     | [payload] validate_post thread has finished
[2026-02-20 13:23:53] 2026-02-20 12:23:31,647 | INFO     | [job] validate thread has finished
[2026-02-20 13:23:53] 2026-02-20 12:23:31,677 | INFO     | [payload] control thread has finished
[2026-02-20 13:23:53] 2026-02-20 12:23:32,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-20 13:23:53] 2026-02-20 12:23:33,140 | INFO     | [job] queue monitor thread has finished
[2026-02-20 13:23:53] 2026-02-20 12:23:34,098 | INFO     | [data] queue_monitor thread has finished
[2026-02-20 13:23:53] 2026-02-20 12:23:35,515 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-02-20 13:23:53] 2026-02-20 12:23:47,810 | INFO     | [monitor] cgroup control has ended
[2026-02-20 13:23:53] 2026-02-20 12:23:48,531 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140659061901120)>', '<ExcThread(monitor, started 140657821738752)>']
[2026-02-20 13:23:53] 2026-02-20 12:23:49,354 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-20 13:23:53] 2026-02-20 12:23:49,354 | INFO     | [monitor] control thread has ended
[2026-02-20 13:23:53] 2026-02-20 12:23:53,557 | INFO     | all workflow threads have been joined
[2026-02-20 13:23:53] 2026-02-20 12:23:53,557 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-20 13:23:53] 2026-02-20 12:23:53,557 | INFO     | traces error code: 0
[2026-02-20 13:23:53] 2026-02-20 12:23:53,558 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-20 13:23:53] 2026-02-20 12:23:53,625 [wrapper] ==== pilot stdout END ====
[2026-02-20 13:23:53] 2026-02-20 12:23:53,629 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-20 13:23:53] 2026-02-20 12:23:53,632 [wrapper] pilotpid: 2050799
[2026-02-20 13:23:53] 2026-02-20 12:23:53,636 [wrapper] Pilot exit status: 0
[2026-02-20 13:23:53] 2026-02-20 12:23:53,648 [wrapper] pandaids: 7021116487
[2026-02-20 13:23:53] 2026-02-20 12:23:53,668 [wrapper] cleanup supervisor_pilot 2061332 2050800
[2026-02-20 13:23:53] 2026-02-20 12:23:53,671 [wrapper] Test setup, not cleaning
[2026-02-20 13:23:53] 2026-02-20 12:23:53,675 [wrapper] apfmon messages muted
[2026-02-20 13:23:53] 2026-02-20 12:23:53,679 [wrapper] ==== wrapper stdout END ====
[2026-02-20 13:23:53] 2026-02-20 12:23:53,682 [wrapper] ==== wrapper stderr END ====
[2026-02-20 13:23:53]  *** Error codes and diagnostics ***
[2026-02-20 13:23:53]     "exeErrorCode": 0,
[2026-02-20 13:23:53]     "exeErrorDiag": "",
[2026-02-20 13:23:53]     "pilotErrorCode": 0,
[2026-02-20 13:23:53]     "pilotErrorDiag": "",
[2026-02-20 13:23:53]  *** Listing of results directory ***
[2026-02-20 13:23:53] total 945384
[2026-02-20 13:23:53] -rw-r--r-- 1 boinc boinc      5111 Feb 19 14:45 queuedata.json
[2026-02-20 13:23:53] -rw-r--r-- 1 boinc boinc    584627 Feb 19 14:45 pilot3.tar.gz
[2026-02-20 13:23:53] -rwx------ 1 boinc boinc     36322 Feb 19 14:46 runpilot2-wrapper.sh
[2026-02-20 13:23:53] -rw-r--r-- 1 boinc boinc       100 Feb 20 11:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-20 13:23:53] -rwxr-xr-x 1 boinc boinc      7986 Feb 20 11:38 run_atlas
[2026-02-20 13:23:53] -rw-r--r-- 1 boinc boinc       105 Feb 20 11:38 job.xml
[2026-02-20 13:23:53] -rw-r--r-- 2 boinc boinc 676497325 Feb 20 11:38 EVNT.48508760._000898.pool.root.1
[2026-02-20 13:23:53] -rw-r--r-- 2 boinc boinc    597954 Feb 20 11:38 input.tar.gz
[2026-02-20 13:23:53] -rw-r--r-- 2 boinc boinc     15845 Feb 20 11:38 start_atlas.sh
[2026-02-20 13:23:53] drwxrwx--x 2 boinc boinc      4096 Feb 20 11:38 shared
[2026-02-20 13:23:53] -rw-r--r-- 1 boinc boinc         0 Feb 20 11:38 boinc_setup_complete
[2026-02-20 13:23:53] -rw-r--r-- 1 boinc boinc      6369 Feb 20 11:38 init_data.xml
[2026-02-20 13:23:53] -rw-r--r-- 1 boinc boinc         0 Feb 20 11:38 boinc_lockfile
[2026-02-20 13:23:53] -rw-r--r-- 1 boinc boinc      2551 Feb 20 11:38 pandaJob.out
[2026-02-20 13:23:53] -rw------- 1 boinc boinc   1001559 Feb 20 11:38 agis_schedconf.cvmfs.json
[2026-02-20 13:23:53] -rw------- 1 boinc boinc   1513015 Feb 20 11:38 agis_ddmendpoints.agis.ALL.json
[2026-02-20 13:23:53] -rw------- 1 boinc boinc       419 Feb 20 11:38 workernode_map.json
[2026-02-20 13:23:53] drwx------ 5 boinc boinc      4096 Feb 20 11:38 pilot3
[2026-02-20 13:23:53] -rw------- 1 boinc boinc 285272767 Feb 20 13:22 HITS.48508763._046635.pool.root.1
[2026-02-20 13:23:53] -rw-r--r-- 1 boinc boinc       530 Feb 20 13:23 boinc_task_state.xml
[2026-02-20 13:23:53] -rw------- 1 boinc boinc        95 Feb 20 13:23 pilot_heartbeat.json
[2026-02-20 13:23:53] -rw------- 1 boinc boinc      1019 Feb 20 13:23 memory_monitor_summary.json
[2026-02-20 13:23:53] -rw------- 1 boinc boinc    280094 Feb 20 13:23 log.48508763._046635.job.log.tgz.1
[2026-02-20 13:23:53] -rw-r--r-- 1 boinc boinc      8192 Feb 20 13:23 boinc_mmap_file
[2026-02-20 13:23:53] -rw-r--r-- 1 boinc boinc        27 Feb 20 13:23 wrapper_checkpoint.txt
[2026-02-20 13:23:53] -rw------- 1 boinc boinc      6305 Feb 20 13:23 heartbeat.json
[2026-02-20 13:23:53] -rw------- 1 boinc boinc      4552 Feb 20 13:23 pilotlog.txt
[2026-02-20 13:23:53] -rw------- 1 boinc boinc    909527 Feb 20 13:23 log.48508763._046635.job.log.1
[2026-02-20 13:23:53] -rw------- 1 boinc boinc       357 Feb 20 13:23 output.list
[2026-02-20 13:23:53] -rw-r--r-- 1 boinc boinc       620 Feb 20 13:23 runtime_log
[2026-02-20 13:23:53] -rw------- 1 boinc boinc   1208320 Feb 20 13:23 result.tar.gz
[2026-02-20 13:23:53] -rw-r--r-- 1 boinc boinc      8896 Feb 20 13:23 runtime_log.err
[2026-02-20 13:23:53] -rw------- 1 boinc boinc       657 Feb 20 13:23 jX2KDm7WJD9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmm2xKDmznwQMo.diag
[2026-02-20 13:23:53] -rw-r--r-- 1 boinc boinc      9881 Feb 20 13:23 stderr.txt
[2026-02-20 13:23:53] HITS file was successfully produced:
[2026-02-20 13:23:53] -rw------- 1 boinc boinc 285272767 Feb 20 13:22 shared/HITS.pool.root.1
[2026-02-20 13:23:53]  *** Contents of shared directory: ***
[2026-02-20 13:23:53] total 941020
[2026-02-20 13:23:53] -rw-r--r-- 2 boinc boinc 676497325 Feb 20 11:38 ATLAS.root_0
[2026-02-20 13:23:53] -rw-r--r-- 2 boinc boinc    597954 Feb 20 11:38 input.tar.gz
[2026-02-20 13:23:53] -rw-r--r-- 2 boinc boinc     15845 Feb 20 11:38 start_atlas.sh
[2026-02-20 13:23:53] -rw------- 1 boinc boinc 285272767 Feb 20 13:22 HITS.pool.root.1
[2026-02-20 13:23:53] -rw------- 1 boinc boinc   1208320 Feb 20 13:23 result.tar.gz
13:23:55 (2046693): run_atlas exited; CPU time 23981.400549
13:23:55 (2046693): called boinc_finish(0)

</stderr_txt>
]]>

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