Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:45:14 (283967): wrapper (7.7.26015): starting
09:45:14 (283967): wrapper: running run_atlas (--nthreads 2)
[2026-02-20 09:45:14] Arguments: --nthreads 2
[2026-02-20 09:45:14] Threads: 2
[2026-02-20 09:45:14] Checking for CVMFS
[2026-02-20 09:45:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-20 09:45:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-20 09:45:15] Running cvmfs_config stat atlas.cern.ch
[2026-02-20 09:45:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-20 09:45:15] 2.9.2.0 3848407 7716 60604 156441 3 50 24962571 36864000 0 130560 0 1860399 99.975 266792 12378 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-20 09:45:15] CVMFS is ok
[2026-02-20 09:45:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-20 09:45:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-20 09:45:15] Further information can be found at the LHC@home message board.
[2026-02-20 09:45:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-20 09:45:15] Checking for apptainer binary...
[2026-02-20 09:45:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-20 09:45:15] Running /usr/bin/apptainer --version
[2026-02-20 09:45:15] apptainer version 1.4.1-1.1
[2026-02-20 09:45:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-20 09:45:15] thA337
[2026-02-20 09:45:15] apptainer works
[2026-02-20 09:45:15] Set ATHENA_PROC_NUMBER=2
[2026-02-20 09:45:15] Set ATHENA_CORE_NUMBER=2
[2026-02-20 09:45:15] Starting ATLAS job with PandaID=7021116562
[2026-02-20 09:45:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-20 12:50:57]  *** The last 200 lines of the pilot log: ***
[2026-02-20 12:50:57] 2026-02-20 11:49:58,478 | INFO     | collected zombie processes
[2026-02-20 12:50:57] 2026-02-20 11:49:58,478 | INFO     | will attempt to kill all subprocesses of pid=292396
[2026-02-20 12:50:57] 2026-02-20 11:49:58,509 | INFO     | process IDs to be killed: [292396] (in reverse order)
[2026-02-20 12:50:57] 2026-02-20 11:49:58,529 | WARNING  | found no corresponding commands to process id(s)
[2026-02-20 12:50:57] 2026-02-20 11:49:58,530 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-20 12:50:57] 2026-02-20 11:49:58,533 | INFO     | did not find any defunct processes belonging to 292396
[2026-02-20 12:50:57] 2026-02-20 11:49:58,537 | INFO     | did not find any defunct processes belonging to 292396
[2026-02-20 12:50:57] 2026-02-20 11:49:58,537 | INFO     | ready for new job
[2026-02-20 12:50:57] 2026-02-20 11:49:58,537 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-20 12:50:57] 2026-02-20 11:49:58,540 | INFO     | **************************************
[2026-02-20 12:50:57] 2026-02-20 11:49:58,540 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-20 12:50:57] 2026-02-20 11:49:58,540 | INFO     | **************************************
[2026-02-20 12:50:57] 2026-02-20 11:49:58,540 | INFO     | 
[2026-02-20 12:50:57] 2026-02-20 11:49:58,542 | INFO     | architecture information:
[2026-02-20 12:50:57] 2026-02-20 11:49:58,542 | INFO     | executing command: cat /etc/os-release
[2026-02-20 12:50:57] 2026-02-20 11:49:58,566 | INFO     | cat /etc/os-release:
[2026-02-20 12:50:57] NAME="CentOS Linux"
[2026-02-20 12:50:57] VERSION="7 (Core)"
[2026-02-20 12:50:57] ID="centos"
[2026-02-20 12:50:57] ID_LIKE="rhel fedora"
[2026-02-20 12:50:57] VERSION_ID="7"
[2026-02-20 12:50:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-20 12:50:57] ANSI_COLOR="0;31"
[2026-02-20 12:50:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-20 12:50:57] HOME_URL="https://www.centos.org/"
[2026-02-20 12:50:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-20 12:50:57] 
[2026-02-20 12:50:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-20 12:50:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-20 12:50:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-20 12:50:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-20 12:50:57] 
[2026-02-20 12:50:57] 2026-02-20 11:49:58,567 | INFO     | **************************************
[2026-02-20 12:50:57] 2026-02-20 11:49:59,070 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-20 12:50:57] 2026-02-20 11:49:59,082 | INFO     | sufficient remaining disk space (483416604672 B)
[2026-02-20 12:50:57] 2026-02-20 11:49:59,082 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-20 12:50:57] 2026-02-20 11:49:59,082 | INFO     | current server update state: UPDATING_FINAL
[2026-02-20 12:50:57] 2026-02-20 11:49:59,082 | INFO     | update_server=False
[2026-02-20 12:50:57] 2026-02-20 11:49:59,082 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-20 12:50:57] 2026-02-20 11:49:59,082 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-20 12:50:57] 2026-02-20 11:49:59,082 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-20 12:50:57] 2026-02-20 11:49:59,082 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-20 12:50:57] 2026-02-20 11:49:59,082 | INFO     | found 0 job(s) in 20 queues
[2026-02-20 12:50:57] 2026-02-20 11:49:59,083 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-20 12:50:57] 2026-02-20 11:49:59,083 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-20 12:50:57] 2026-02-20 11:49:59,513 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-20 12:50:57] 2026-02-20 11:49:59,514 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-20 12:50:57] 2026-02-20 11:49:59,514 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-20 12:50:57] 2026-02-20 11:49:59,514 | INFO     | will abort loop
[2026-02-20 12:50:57] 2026-02-20 11:49:59,612 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-20 12:50:57] 2026-02-20 11:49:59,613 | INFO     | all job control threads have been joined
[2026-02-20 12:50:57] 2026-02-20 11:49:59,679 | INFO     | all payload control threads have been joined
[2026-02-20 12:50:57] 2026-02-20 11:50:00,087 | INFO     | [job] retrieve thread has finished
[2026-02-20 12:50:57] 2026-02-20 11:50:00,088 | INFO     | [job] queue monitor thread has finished
[2026-02-20 12:50:57] 2026-02-20 11:50:00,111 | INFO     | [payload] validate_pre thread has finished
[2026-02-20 12:50:57] 2026-02-20 11:50:00,114 | INFO     | all data control threads have been joined
[2026-02-20 12:50:57] 2026-02-20 11:50:00,128 | INFO     | [data] copytool_in thread has finished
[2026-02-20 12:50:57] 2026-02-20 11:50:00,520 | INFO     | [job] job monitor thread has finished
[2026-02-20 12:50:57] 2026-02-20 11:50:00,619 | INFO     | [job] control thread has finished
[2026-02-20 12:50:57] 2026-02-20 11:50:00,684 | INFO     | [payload] control thread has finished
[2026-02-20 12:50:57] 2026-02-20 11:50:00,748 | INFO     | [payload] failed_post thread has finished
[2026-02-20 12:50:57] 2026-02-20 11:50:01,019 | INFO     | [payload] execute_payloads thread has finished
[2026-02-20 12:50:57] 2026-02-20 11:50:01,120 | INFO     | [data] control thread has finished
[2026-02-20 12:50:57] 2026-02-20 11:50:01,413 | INFO     | [job] create_data_payload thread has finished
[2026-02-20 12:50:57] 2026-02-20 11:50:01,536 | INFO     | [job] validate thread has finished
[2026-02-20 12:50:57] 2026-02-20 11:50:01,551 | INFO     | [payload] validate_post thread has finished
[2026-02-20 12:50:57] 2026-02-20 11:50:01,619 | INFO     | [data] copytool_out thread has finished
[2026-02-20 12:50:57] 2026-02-20 11:50:03,089 | INFO     | [data] queue_monitor thread has finished
[2026-02-20 12:50:57] 2026-02-20 11:50:10,083 | INFO     | job.realtimelogging is not enabled
[2026-02-20 12:50:57] 2026-02-20 11:50:11,089 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-20 12:50:57] 2026-02-20 11:50:50,513 | INFO     | [monitor] cgroup control has ended
[2026-02-20 12:50:57] 2026-02-20 11:50:52,624 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140337158575936)>', '<ExcThread(monitor, started 140336798078720)>']
[2026-02-20 12:50:57] 2026-02-20 11:50:53,355 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-20 12:50:57] 2026-02-20 11:50:53,355 | INFO     | [monitor] control thread has ended
[2026-02-20 12:50:57] 2026-02-20 11:50:57,650 | INFO     | all workflow threads have been joined
[2026-02-20 12:50:57] 2026-02-20 11:50:57,651 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-20 12:50:57] 2026-02-20 11:50:57,651 | INFO     | traces error code: 0
[2026-02-20 12:50:57] 2026-02-20 11:50:57,651 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-20 12:50:57] 2026-02-20 11:50:57,693 [wrapper] ==== pilot stdout END ====
[2026-02-20 12:50:57] 2026-02-20 11:50:57,695 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-20 12:50:57] 2026-02-20 11:50:57,697 [wrapper] pilotpid: 287988
[2026-02-20 12:50:57] 2026-02-20 11:50:57,699 [wrapper] Pilot exit status: 0
[2026-02-20 12:50:57] 2026-02-20 11:50:57,705 [wrapper] pandaids: 7021116562
[2026-02-20 12:50:57] 2026-02-20 11:50:57,717 [wrapper] cleanup supervisor_pilot  298057 287989
[2026-02-20 12:50:57] 2026-02-20 11:50:57,719 [wrapper] Test setup, not cleaning
[2026-02-20 12:50:57] 2026-02-20 11:50:57,721 [wrapper] apfmon messages muted
[2026-02-20 12:50:57] 2026-02-20 11:50:57,723 [wrapper] ==== wrapper stdout END ====
[2026-02-20 12:50:57] 2026-02-20 11:50:57,725 [wrapper] ==== wrapper stderr END ====
[2026-02-20 12:50:57]  *** Error codes and diagnostics ***
[2026-02-20 12:50:57]     "exeErrorCode": 0,
[2026-02-20 12:50:57]     "exeErrorDiag": "",
[2026-02-20 12:50:57]     "pilotErrorCode": 0,
[2026-02-20 12:50:57]     "pilotErrorDiag": "",
[2026-02-20 12:50:57]  *** Listing of results directory ***
[2026-02-20 12:50:57] total 942164
[2026-02-20 12:50:57] -rw-r--r-- 1 boinc boinc      5111 Feb 19 14:45 queuedata.json
[2026-02-20 12:50:57] -rw-r--r-- 1 boinc boinc    584627 Feb 19 14:45 pilot3.tar.gz
[2026-02-20 12:50:57] -rwx------ 1 boinc boinc     36322 Feb 19 14:46 runpilot2-wrapper.sh
[2026-02-20 12:50:57] -rw-r--r-- 1 boinc boinc       100 Feb 20 09:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-20 12:50:57] -rwxr-xr-x 1 boinc boinc      7986 Feb 20 09:45 run_atlas
[2026-02-20 12:50:57] -rw-r--r-- 1 boinc boinc       105 Feb 20 09:45 job.xml
[2026-02-20 12:50:57] -rw-r--r-- 2 boinc boinc 674147986 Feb 20 09:45 EVNT.48508760._000899.pool.root.1
[2026-02-20 12:50:57] -rw-r--r-- 2 boinc boinc    597963 Feb 20 09:45 input.tar.gz
[2026-02-20 12:50:57] -rw-r--r-- 2 boinc boinc     15845 Feb 20 09:45 start_atlas.sh
[2026-02-20 12:50:57] drwxrwx--x 2 boinc boinc      4096 Feb 20 09:45 shared
[2026-02-20 12:50:57] -rw-r--r-- 1 boinc boinc         0 Feb 20 09:45 boinc_setup_complete
[2026-02-20 12:50:57] -rw-r--r-- 1 boinc boinc      6206 Feb 20 09:45 init_data.xml
[2026-02-20 12:50:57] -rw-r--r-- 1 boinc boinc         0 Feb 20 09:45 boinc_lockfile
[2026-02-20 12:50:57] -rw-r--r-- 1 boinc boinc      2553 Feb 20 09:45 pandaJob.out
[2026-02-20 12:50:57] -rw------- 1 boinc boinc   1001567 Feb 20 09:45 agis_schedconf.cvmfs.json
[2026-02-20 12:50:57] -rw------- 1 boinc boinc       425 Feb 20 09:45 workernode_map.json
[2026-02-20 12:50:57] drwx------ 5 boinc boinc      4096 Feb 20 09:45 pilot3
[2026-02-20 12:50:57] -rw------- 1 boinc boinc        95 Feb 20 12:49 pilot_heartbeat.json
[2026-02-20 12:50:57] -rw------- 1 boinc boinc 282870076 Feb 20 12:49 HITS.48508763._046710.pool.root.1
[2026-02-20 12:50:57] -rw-r--r-- 1 boinc boinc       531 Feb 20 12:49 boinc_task_state.xml
[2026-02-20 12:50:57] -rw------- 1 boinc boinc      1027 Feb 20 12:49 memory_monitor_summary.json
[2026-02-20 12:50:57] -rw------- 1 boinc boinc   1513015 Feb 20 12:49 agis_ddmendpoints.agis.ALL.json
[2026-02-20 12:50:57] -rw------- 1 boinc boinc    344891 Feb 20 12:49 log.48508763._046710.job.log.tgz.1
[2026-02-20 12:50:57] -rw------- 1 boinc boinc      6306 Feb 20 12:49 heartbeat.json
[2026-02-20 12:50:57] -rw-r--r-- 1 boinc boinc      8192 Feb 20 12:50 boinc_mmap_file
[2026-02-20 12:50:57] -rw-r--r-- 1 boinc boinc        28 Feb 20 12:50 wrapper_checkpoint.txt
[2026-02-20 12:50:57] -rw------- 1 boinc boinc      4810 Feb 20 12:50 pilotlog.txt
[2026-02-20 12:50:57] -rw------- 1 boinc boinc   1572734 Feb 20 12:50 log.48508763._046710.job.log.1
[2026-02-20 12:50:57] -rw------- 1 boinc boinc       357 Feb 20 12:50 output.list
[2026-02-20 12:50:57] -rw-r--r-- 1 boinc boinc       620 Feb 20 12:50 runtime_log
[2026-02-20 12:50:57] -rw------- 1 boinc boinc   1935360 Feb 20 12:50 result.tar.gz
[2026-02-20 12:50:57] -rw-r--r-- 1 boinc boinc      8897 Feb 20 12:50 runtime_log.err
[2026-02-20 12:50:57] -rw------- 1 boinc boinc       659 Feb 20 12:50 e8NNDm7WJD9n9Rq4apOajLDm4fhM0noT9bVooX4SDmJbwKDm8Z91rm.diag
[2026-02-20 12:50:57] -rw-r--r-- 1 boinc boinc     10517 Feb 20 12:50 stderr.txt
[2026-02-20 12:50:57] HITS file was successfully produced:
[2026-02-20 12:50:57] -rw------- 1 boinc boinc 282870076 Feb 20 12:49 shared/HITS.pool.root.1
[2026-02-20 12:50:57]  *** Contents of shared directory: ***
[2026-02-20 12:50:57] total 937092
[2026-02-20 12:50:57] -rw-r--r-- 2 boinc boinc 674147986 Feb 20 09:45 ATLAS.root_0
[2026-02-20 12:50:57] -rw-r--r-- 2 boinc boinc    597963 Feb 20 09:45 input.tar.gz
[2026-02-20 12:50:57] -rw-r--r-- 2 boinc boinc     15845 Feb 20 09:45 start_atlas.sh
[2026-02-20 12:50:57] -rw------- 1 boinc boinc 282870076 Feb 20 12:49 HITS.pool.root.1
[2026-02-20 12:50:57] -rw------- 1 boinc boinc   1935360 Feb 20 12:50 result.tar.gz
12:50:59 (283967): run_atlas exited; CPU time 21671.948291
12:50:59 (283967): called boinc_finish(0)

</stderr_txt>
]]>

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