Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:33:44 (11469): wrapper (7.7.26015): starting
08:33:44 (11469): wrapper: running run_atlas (--nthreads 8)
[2026-02-20 08:33:44] Arguments: --nthreads 8
[2026-02-20 08:33:44] Threads: 8
[2026-02-20 08:33:44] Checking for CVMFS
[2026-02-20 08:33:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-20 08:33:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-20 08:33:47] Running cvmfs_config stat atlas.cern.ch
[2026-02-20 08:33:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-20 08:33:48] 2.11.2.0 4174 95599 107164 156438 2 59 15895212 25165824 3750 130560 0 31739558 99.796 27421752 3285 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-20 08:33:48] CVMFS is ok
[2026-02-20 08:33:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-20 08:33:48] Checking for apptainer binary...
[2026-02-20 08:33:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-20 08:33:48] Running /usr/bin/apptainer --version
[2026-02-20 08:33:48] apptainer version 1.3.2-1.el7
[2026-02-20 08:33:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-20 08:34:07] cg-vwn425.simple-grid.lan
[2026-02-20 08:34:07] apptainer works
[2026-02-20 08:34:07] Set ATHENA_PROC_NUMBER=8
[2026-02-20 08:34:07] Set ATHENA_CORE_NUMBER=8
[2026-02-20 08:34:07] Starting ATLAS job with PandaID=7021116029
[2026-02-20 08:34:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-20 14:29:06]  *** The last 200 lines of the pilot log: ***
[2026-02-20 14:29:06] 2026-02-20 13:28:05,637 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-7021116029/memory_monitor_summary.json (trf name=prmon)
[2026-02-20 14:29:06] 2026-02-20 13:28:05,637 | INFO     | extracted standard info from prmon json
[2026-02-20 14:29:06] 2026-02-20 13:28:05,638 | INFO     | extracted standard memory fields from prmon json
[2026-02-20 14:29:06] 2026-02-20 13:28:05,638 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-20 14:29:06] 2026-02-20 13:28:05,638 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-20 14:29:06] 2026-02-20 13:28:05,638 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-20 14:29:06] 2026-02-20 13:28:05,646 | INFO     | fitting pss+swap vs Time
[2026-02-20 14:29:06] 2026-02-20 13:28:05,647 | INFO     | sum of square deviations: 12080189290.0
[2026-02-20 14:29:06] 2026-02-20 13:28:05,651 | INFO     | sum of deviations: 105676968703.0
[2026-02-20 14:29:06] 2026-02-20 13:28:05,651 | INFO     | mean x: 1771583730.0
[2026-02-20 14:29:06] 2026-02-20 13:28:05,651 | INFO     | mean y: 2521453.604719764
[2026-02-20 14:29:06] 2026-02-20 13:28:05,651 | INFO     | intersect: -15495215700.640982
[2026-02-20 14:29:06] 2026-02-20 13:28:05,652 | INFO     | chi2: 5.2564364496124245
[2026-02-20 14:29:06] 2026-02-20 13:28:05,652 | INFO     | sum of square deviations: 11553509647.5
[2026-02-20 14:29:06] 2026-02-20 13:28:05,656 | INFO     | sum of deviations: 126638615466.49998
[2026-02-20 14:29:06] 2026-02-20 13:28:05,656 | INFO     | mean x: 1771583577.5
[2026-02-20 14:29:06] 2026-02-20 13:28:05,656 | INFO     | mean y: 2527443.0508982036
[2026-02-20 14:29:06] 2026-02-20 13:28:05,656 | INFO     | intersect: -19415891572.709812
[2026-02-20 14:29:06] 2026-02-20 13:28:05,657 | INFO     | chi2: 4.510044773150241
[2026-02-20 14:29:06] 2026-02-20 13:28:05,657 | INFO     | current chi2=4.510044773150241 (change=14.199575769953753 %)
[2026-02-20 14:29:06] 2026-02-20 13:28:05,657 | INFO     | right removable region: 333
[2026-02-20 14:29:06] 2026-02-20 13:28:05,658 | INFO     | sum of square deviations: 11553509647.5
[2026-02-20 14:29:06] 2026-02-20 13:28:05,661 | INFO     | sum of deviations: -6368862807.000004
[2026-02-20 14:29:06] 2026-02-20 13:28:05,661 | INFO     | mean x: 1771583882.5
[2026-02-20 14:29:06] 2026-02-20 13:28:05,662 | INFO     | mean y: 2553857.5389221557
[2026-02-20 14:29:06] 2026-02-20 13:28:05,662 | INFO     | intersect: 979138033.5149535
[2026-02-20 14:29:06] 2026-02-20 13:28:05,662 | INFO     | chi2: 1.288882410302608
[2026-02-20 14:29:06] 2026-02-20 13:28:05,663 | INFO     | current chi2=1.288882410302608 (change=75.47992023383748 %)
[2026-02-20 14:29:06] 2026-02-20 13:28:05,663 | INFO     | sum of square deviations: 11042365180.0
[2026-02-20 14:29:06] 2026-02-20 13:28:05,667 | INFO     | sum of deviations: -34052565945.999992
[2026-02-20 14:29:06] 2026-02-20 13:28:05,667 | INFO     | mean x: 1771584035.0
[2026-02-20 14:29:06] 2026-02-20 13:28:05,667 | INFO     | mean y: 2562061.6960486323
[2026-02-20 14:29:06] 2026-02-20 13:28:05,667 | INFO     | intersect: 5465792193.768013
[2026-02-20 14:29:06] 2026-02-20 13:28:05,668 | INFO     | chi2: 0.8765902008182448
[2026-02-20 14:29:06] 2026-02-20 13:28:05,668 | INFO     | current chi2=0.8765902008182448 (change=31.988349455988303 %)
[2026-02-20 14:29:06] 2026-02-20 13:28:05,668 | INFO     | sum of square deviations: 10546523325.0
[2026-02-20 14:29:06] 2026-02-20 13:28:05,672 | INFO     | sum of deviations: -25296926676.000004
[2026-02-20 14:29:06] 2026-02-20 13:28:05,672 | INFO     | mean x: 1771584187.5
[2026-02-20 14:29:06] 2026-02-20 13:28:05,672 | INFO     | mean y: 2559366.4814814813
[2026-02-20 14:29:06] 2026-02-20 13:28:05,672 | INFO     | intersect: 4251887217.045785
[2026-02-20 14:29:06] 2026-02-20 13:28:05,673 | INFO     | chi2: 0.8575876355028915
[2026-02-20 14:29:06] 2026-02-20 13:28:05,673 | INFO     | current chi2=0.8575876355028915 (change=2.1677820830777605 %)
[2026-02-20 14:29:06] 2026-02-20 13:28:05,673 | INFO     | left removable region: 30
[2026-02-20 14:29:06] 2026-02-20 13:28:05,673 | INFO     | sum of square deviations: 8625843592.0
[2026-02-20 14:29:06] 2026-02-20 13:28:05,676 | INFO     | sum of deviations: 12412987477.999998
[2026-02-20 14:29:06] 2026-02-20 13:28:05,677 | INFO     | mean x: 1771584462.0
[2026-02-20 14:29:06] 2026-02-20 13:28:05,677 | INFO     | mean y: 2560936.4884488448
[2026-02-20 14:29:06] 2026-02-20 13:28:05,677 | INFO     | intersect: -2546830958.7483835
[2026-02-20 14:29:06] 2026-02-20 13:28:05,677 | INFO     | chi2: 0.0010187318886777125
[2026-02-20 14:29:06] 2026-02-20 13:28:05,678 | INFO     | current memory leak: 1.44 B/s (using 303 data points, chi2=0.00)
[2026-02-20 14:29:06] 2026-02-20 13:28:05,678 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-02-20 14:29:06] 2026-02-20 13:28:05,679 | INFO     | ..............................
[2026-02-20 14:29:06] 2026-02-20 13:28:05,679 | INFO     | . Timing measurements:
[2026-02-20 14:29:06] 2026-02-20 13:28:05,679 | INFO     | . get job = 0 s
[2026-02-20 14:29:06] 2026-02-20 13:28:05,679 | INFO     | . initial setup = 94 s
[2026-02-20 14:29:06] 2026-02-20 13:28:05,679 | INFO     | . payload setup = 130 s
[2026-02-20 14:29:06] 2026-02-20 13:28:05,679 | INFO     | . stage-in = 0 s
[2026-02-20 14:29:06] 2026-02-20 13:28:05,679 | INFO     | . payload execution = 20769 s
[2026-02-20 14:29:06] 2026-02-20 13:28:05,679 | INFO     | . stage-out = 3 s
[2026-02-20 14:29:06] 2026-02-20 13:28:05,679 | INFO     | . log creation = 1 s
[2026-02-20 14:29:06] 2026-02-20 13:28:05,679 | INFO     | ..............................
[2026-02-20 14:29:06] 2026-02-20 13:28:05,721 | INFO     | time since job start (20924s) is within the limit (349056.0s)
[2026-02-20 14:29:06] 2026-02-20 13:28:05,818 | INFO     | 
[2026-02-20 14:29:06] 2026-02-20 13:28:05,819 | INFO     | job summary report
[2026-02-20 14:29:06] 2026-02-20 13:28:05,819 | INFO     | --------------------------------------------------
[2026-02-20 14:29:06] 2026-02-20 13:28:05,819 | INFO     | PanDA job id: 7021116029
[2026-02-20 14:29:06] 2026-02-20 13:28:05,819 | INFO     | task id: 48508763
[2026-02-20 14:29:06] 2026-02-20 13:28:05,819 | INFO     | errors: (none)
[2026-02-20 14:29:06] 2026-02-20 13:28:05,819 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-20 14:29:06] 2026-02-20 13:28:05,819 | INFO     | pilot state: finished 
[2026-02-20 14:29:06] 2026-02-20 13:28:05,819 | INFO     | transexitcode: 0
[2026-02-20 14:29:06] 2026-02-20 13:28:05,820 | INFO     | exeerrorcode: 0
[2026-02-20 14:29:06] 2026-02-20 13:28:05,820 | INFO     | exeerrordiag: 
[2026-02-20 14:29:06] 2026-02-20 13:28:05,820 | INFO     | exitcode: 0
[2026-02-20 14:29:06] 2026-02-20 13:28:05,820 | INFO     | exitmsg: OK
[2026-02-20 14:29:06] 2026-02-20 13:28:05,820 | INFO     | cpuconsumptiontime: 80244 s
[2026-02-20 14:29:06] 2026-02-20 13:28:05,820 | INFO     | nevents: 400
[2026-02-20 14:29:06] 2026-02-20 13:28:05,820 | INFO     | neventsw: 0
[2026-02-20 14:29:06] 2026-02-20 13:28:05,820 | INFO     | pid: 20077
[2026-02-20 14:29:06] 2026-02-20 13:28:05,820 | INFO     | pgrp: 20077
[2026-02-20 14:29:06] 2026-02-20 13:28:05,820 | INFO     | corecount: 8
[2026-02-20 14:29:06] 2026-02-20 13:28:05,821 | INFO     | event service: False
[2026-02-20 14:29:06] 2026-02-20 13:28:05,821 | INFO     | sizes: {0: 2281171, 1: 2281857, 2: 2282318, 13: 2282318, 20904: 2315940, 20909: 2325124, 20911: 2325262}
[2026-02-20 14:29:06] 2026-02-20 13:28:05,821 | INFO     | --------------------------------------------------
[2026-02-20 14:29:06] 2026-02-20 13:28:05,821 | INFO     | 
[2026-02-20 14:29:06] 2026-02-20 13:28:05,821 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-02-20 14:29:06] 2026-02-20 13:28:06,397 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-20 14:29:06] 2026-02-20 13:28:06,397 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-20 14:29:06] 2026-02-20 13:28:06,397 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-20 14:29:06] 2026-02-20 13:28:06,397 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-20 14:29:06] 2026-02-20 13:28:06,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-20 14:29:06] 2026-02-20 13:28:06,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-20 14:29:06] 2026-02-20 13:28:06,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-20 14:29:06] 2026-02-20 13:28:06,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-20 14:29:06] 2026-02-20 13:28:06,398 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-20 14:29:06] 2026-02-20 13:28:06,398 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-20 14:29:06] 2026-02-20 13:28:06,398 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-20 14:29:06] 2026-02-20 13:28:06,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-20 14:29:06] 2026-02-20 13:28:06,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-20 14:29:06] 2026-02-20 13:28:06,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-20 14:29:06] 2026-02-20 13:28:06,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-20 14:29:06] 2026-02-20 13:28:06,399 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-20 14:29:06] 2026-02-20 13:28:06,399 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-20 14:29:06] 2026-02-20 13:28:06,399 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-20 14:29:06] 2026-02-20 13:28:06,399 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-20 14:29:06] 2026-02-20 13:28:06,399 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-20 14:29:06] 2026-02-20 13:28:06,399 | INFO     | job 7021116029 has completed (purged errors)
[2026-02-20 14:29:06] 2026-02-20 13:28:06,399 | INFO     | overall cleanup function is called
[2026-02-20 14:29:06] 2026-02-20 13:28:07,408 | INFO     | --- collectZombieJob: --- 10, [20077]
[2026-02-20 14:29:06] 2026-02-20 13:28:07,408 | INFO     | zombie collector waiting for pid 20077
[2026-02-20 14:29:06] 2026-02-20 13:28:07,408 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-20 14:29:06] 2026-02-20 13:28:07,408 | INFO     | collected zombie processes
[2026-02-20 14:29:06] 2026-02-20 13:28:07,408 | INFO     | will attempt to kill all subprocesses of pid=20077
[2026-02-20 14:29:06] 2026-02-20 13:28:07,507 | INFO     | process IDs to be killed: [20077] (in reverse order)
[2026-02-20 14:29:06] 2026-02-20 13:28:08,135 | WARNING  | found no corresponding commands to process id(s)
[2026-02-20 14:29:06] 2026-02-20 13:28:08,136 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-20 14:29:06] 2026-02-20 13:28:08,139 | INFO     | did not find any defunct processes belonging to 20077
[2026-02-20 14:29:06] 2026-02-20 13:28:08,145 | INFO     | did not find any defunct processes belonging to 20077
[2026-02-20 14:29:06] 2026-02-20 13:28:08,145 | INFO     | ready for new job
[2026-02-20 14:29:06] 2026-02-20 13:28:08,145 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-20 14:29:06] 2026-02-20 13:28:08,148 | INFO     | **************************************
[2026-02-20 14:29:06] 2026-02-20 13:28:08,148 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-20 14:29:06] 2026-02-20 13:28:08,148 | INFO     | **************************************
[2026-02-20 14:29:06] 2026-02-20 13:28:08,148 | INFO     | 
[2026-02-20 14:29:06] 2026-02-20 13:28:08,149 | INFO     | pilot is running in a VM
[2026-02-20 14:29:06] 2026-02-20 13:28:08,149 | INFO     | architecture information:
[2026-02-20 14:29:06] 2026-02-20 13:28:08,159 | INFO     | executing command: cat /etc/os-release
[2026-02-20 14:29:06] 2026-02-20 13:28:08,311 | INFO     | cat /etc/os-release:
[2026-02-20 14:29:06] NAME="CentOS Linux"
[2026-02-20 14:29:06] VERSION="7 (Core)"
[2026-02-20 14:29:06] ID="centos"
[2026-02-20 14:29:06] ID_LIKE="rhel fedora"
[2026-02-20 14:29:06] VERSION_ID="7"
[2026-02-20 14:29:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-20 14:29:06] ANSI_COLOR="0;31"
[2026-02-20 14:29:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-20 14:29:06] HOME_URL="https://www.centos.org/"
[2026-02-20 14:29:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-20 14:29:06] 
[2026-02-20 14:29:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-20 14:29:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-20 14:29:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-20 14:29:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-20 14:29:06] 
[2026-02-20 14:29:06] 2026-02-20 13:28:08,311 | INFO     | **************************************
[2026-02-20 14:29:06] 2026-02-20 13:28:08,815 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-02-20 14:29:06] 2026-02-20 13:28:09,015 | INFO     | sufficient remaining disk space (495399731200 B)
[2026-02-20 14:29:06] 2026-02-20 13:28:09,015 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-20 14:29:06] 2026-02-20 13:28:09,015 | INFO     | current server update state: UPDATING_FINAL
[2026-02-20 14:29:06] 2026-02-20 13:28:09,015 | INFO     | update_server=False
[2026-02-20 14:29:06] 2026-02-20 13:28:09,016 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-20 14:29:06] 2026-02-20 13:28:09,017 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-20 14:29:06] 2026-02-20 13:28:09,043 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-20 14:29:06] 2026-02-20 13:28:09,043 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-20 14:29:06] 2026-02-20 13:28:09,043 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-20 14:29:06] 2026-02-20 13:28:09,043 | INFO     | will abort loop
[2026-02-20 14:29:06] 2026-02-20 13:28:09,468 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-20 14:29:06] 2026-02-20 13:28:09,811 | INFO     | all job control threads have been joined
[2026-02-20 14:29:06] 2026-02-20 13:28:10,024 | INFO     | [job] retrieve thread has finished
[2026-02-20 14:29:06] 2026-02-20 13:28:10,049 | INFO     | [job] job monitor thread has finished
[2026-02-20 14:29:06] 2026-02-20 13:28:10,096 | INFO     | all data control threads have been joined
[2026-02-20 14:29:06] 2026-02-20 13:28:10,147 | INFO     | [job] validate thread has finished
[2026-02-20 14:29:06] 2026-02-20 13:28:10,331 | INFO     | [payload] validate_pre thread has finished
[2026-02-20 14:29:06] 2026-02-20 13:28:10,357 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-20 14:29:06] 2026-02-20 13:28:10,366 | INFO     | [data] copytool_in thread has finished
[2026-02-20 14:29:06] 2026-02-20 13:28:10,400 | INFO     | [job] create_data_payload thread has finished
[2026-02-20 14:29:06] 2026-02-20 13:28:10,476 | INFO     | all payload control threads have been joined
[2026-02-20 14:29:06] 2026-02-20 13:28:10,777 | INFO     | [payload] validate_post thread has finished
[2026-02-20 14:29:06] 2026-02-20 13:28:10,817 | INFO     | [job] control thread has finished
[2026-02-20 14:29:06] 2026-02-20 13:28:10,835 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-20 14:29:06] 2026-02-20 13:28:11,024 | INFO     | [data] copytool_out thread has finished
[2026-02-20 14:29:06] 2026-02-20 13:28:11,102 | INFO     | [data] control thread has finished
[2026-02-20 14:29:06] 2026-02-20 13:28:11,365 | INFO     | [payload] failed_post thread has finished
[2026-02-20 14:29:06] 2026-02-20 13:28:11,422 | INFO     | [payload] execute_payloads thread has finished
[2026-02-20 14:29:06] 2026-02-20 13:28:11,481 | INFO     | [payload] control thread has finished
[2026-02-20 14:29:06] 2026-02-20 13:28:11,841 | INFO     | [job] queue monitor thread has finished
[2026-02-20 14:29:06] 2026-02-20 13:28:13,477 | INFO     | [data] queue_monitor thread has finished
[2026-02-20 14:29:06] 2026-02-20 13:28:38,864 | INFO     | PID=15575 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-20 14:29:06] 2026-02-20 13:28:38,864 | INFO     | .. there are 9 such processes running
[2026-02-20 14:29:06] 2026-02-20 13:28:38,865 | INFO     | found 0 job(s) in 20 queues
[2026-02-20 14:29:06] 2026-02-20 13:28:38,865 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-20 14:29:06] 2026-02-20 13:28:38,865 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-20 14:29:06] 2026-02-20 13:28:56,974 | INFO     | [monitor] cgroup control has ended
[2026-02-20 14:29:06] 2026-02-20 13:28:57,010 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140607009122112)>', '<ExcThread(monitor, started 140606709929728)>']
[2026-02-20 14:29:06] 2026-02-20 13:28:57,980 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-20 14:29:06] 2026-02-20 13:28:57,980 | INFO     | [monitor] control thread has ended
[2026-02-20 14:29:06] 2026-02-20 13:29:02,036 | INFO     | all workflow threads have been joined
[2026-02-20 14:29:06] 2026-02-20 13:29:02,036 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-20 14:29:06] 2026-02-20 13:29:02,036 | INFO     | traces error code: 0
[2026-02-20 14:29:06] 2026-02-20 13:29:02,036 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-20 14:29:06] 2026-02-20 13:29:02,360 [wrapper] ==== pilot stdout END ====
[2026-02-20 14:29:06] 2026-02-20 13:29:02,454 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-20 14:29:06] 2026-02-20 13:29:02,529 [wrapper] pilotpid: 15575
[2026-02-20 14:29:06] 2026-02-20 13:29:02,568 [wrapper] Pilot exit status: 0
[2026-02-20 14:29:06] 2026-02-20 13:29:02,861 [wrapper] pandaids: 7021116029
[2026-02-20 14:29:06] 2026-02-20 13:29:03,820 [wrapper] cleanup supervisor_pilot 11540 15576
[2026-02-20 14:29:06] 2026-02-20 13:29:03,916 [wrapper] Test setup, not cleaning
[2026-02-20 14:29:06] 2026-02-20 13:29:04,000 [wrapper] apfmon messages muted
[2026-02-20 14:29:06] 2026-02-20 13:29:04,065 [wrapper] ==== wrapper stdout END ====
[2026-02-20 14:29:06] 2026-02-20 13:29:04,111 [wrapper] ==== wrapper stderr END ====
[2026-02-20 14:29:06]  *** Error codes and diagnostics ***
[2026-02-20 14:29:06]     "exeErrorCode": 0,
[2026-02-20 14:29:06]     "exeErrorDiag": "",
[2026-02-20 14:29:06]     "pilotErrorCode": 0,
[2026-02-20 14:29:06]     "pilotErrorDiag": "",
[2026-02-20 14:29:06]  *** Listing of results directory ***
[2026-02-20 14:29:06] total 952116
[2026-02-20 14:29:06] -rw-r--r--. 1 boinc boinc      5111 Feb 19 14:45 queuedata.json
[2026-02-20 14:29:06] -rw-r--r--. 1 boinc boinc    584627 Feb 19 14:45 pilot3.tar.gz
[2026-02-20 14:29:06] -rwx------. 1 boinc boinc     36322 Feb 19 14:45 runpilot2-wrapper.sh
[2026-02-20 14:29:06] -rw-r--r--. 1 boinc boinc       100 Feb 20 08:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-20 14:29:06] -rwxr-xr-x. 1 boinc boinc      7986 Feb 20 08:33 run_atlas
[2026-02-20 14:29:06] -rw-r--r--. 1 boinc boinc       105 Feb 20 08:33 job.xml
[2026-02-20 14:29:06] -rw-r--r--. 2 boinc boinc 685587491 Feb 20 08:33 EVNT.48508760._000893.pool.root.1
[2026-02-20 14:29:06] -rw-r--r--. 2 boinc boinc     15845 Feb 20 08:33 start_atlas.sh
[2026-02-20 14:29:06] drwxrwx--x. 2 boinc boinc        68 Feb 20 08:33 shared
[2026-02-20 14:29:06] -rw-r--r--. 2 boinc boinc    597949 Feb 20 08:33 input.tar.gz
[2026-02-20 14:29:06] -rw-r--r--. 1 boinc boinc      6392 Feb 20 08:33 init_data.xml
[2026-02-20 14:29:06] -rw-r--r--. 1 boinc boinc         0 Feb 20 08:33 boinc_lockfile
[2026-02-20 14:29:06] -rw-r--r--. 1 boinc boinc      2552 Feb 20 08:34 pandaJob.out
[2026-02-20 14:29:06] -rw-------. 1 boinc boinc       415 Feb 20 08:39 workernode_map.json
[2026-02-20 14:29:06] -rw-------. 1 boinc boinc   1001567 Feb 20 08:39 agis_schedconf.cvmfs.json
[2026-02-20 14:29:06] drwx------. 5 boinc boinc      4096 Feb 20 08:39 pilot3
[2026-02-20 14:29:06] -rw-------. 1 boinc boinc 278530298 Feb 20 14:26 HITS.48508763._046404.pool.root.1
[2026-02-20 14:29:06] -rw-r--r--. 1 boinc boinc       532 Feb 20 14:27 boinc_task_state.xml
[2026-02-20 14:29:06] -rw-------. 1 boinc boinc        95 Feb 20 14:27 pilot_heartbeat.json
[2026-02-20 14:29:06] -rw-------. 1 boinc boinc      1016 Feb 20 14:27 memory_monitor_summary.json
[2026-02-20 14:29:06] -rw-------. 1 boinc boinc   1513015 Feb 20 14:28 agis_ddmendpoints.agis.ALL.json
[2026-02-20 14:29:06] -rw-------. 1 boinc boinc    566225 Feb 20 14:28 log.48508763._046404.job.log.tgz.1
[2026-02-20 14:29:06] -rw-------. 1 boinc boinc      6321 Feb 20 14:28 heartbeat.json
[2026-02-20 14:29:06] -rw-r--r--. 1 boinc boinc      8192 Feb 20 14:28 boinc_mmap_file
[2026-02-20 14:29:06] -rw-r--r--. 1 boinc boinc        28 Feb 20 14:28 wrapper_checkpoint.txt
[2026-02-20 14:29:06] -rw-------. 1 boinc boinc      5067 Feb 20 14:29 pilotlog.txt
[2026-02-20 14:29:06] -rw-------. 1 boinc boinc   2900602 Feb 20 14:29 log.48508763._046404.job.log.1
[2026-02-20 14:29:06] -rw-------. 1 boinc boinc       357 Feb 20 14:29 output.list
[2026-02-20 14:29:06] -rw-r--r--. 1 boinc boinc       620 Feb 20 14:29 runtime_log
[2026-02-20 14:29:06] -rw-------. 1 boinc boinc   3481600 Feb 20 14:29 result.tar.gz
[2026-02-20 14:29:06] -rw-r--r--. 1 boinc boinc      8832 Feb 20 14:29 runtime_log.err
[2026-02-20 14:29:06] -rw-------. 1 boinc boinc       657 Feb 20 14:29 HXSKDmtWJD9n9Rq4apOajLDm4fhM0noT9bVooX4SDmPZwKDmmWJ3Lo.diag
[2026-02-20 14:29:06] -rw-r--r--. 1 boinc boinc     20744 Feb 20 14:29 stderr.txt
[2026-02-20 14:29:06] HITS file was successfully produced:
[2026-02-20 14:29:06] -rw-------. 1 boinc boinc 278530298 Feb 20 14:26 shared/HITS.pool.root.1
[2026-02-20 14:29:06]  *** Contents of shared directory: ***
[2026-02-20 14:29:06] total 945524
[2026-02-20 14:29:06] -rw-r--r--. 2 boinc boinc 685587491 Feb 20 08:33 ATLAS.root_0
[2026-02-20 14:29:06] -rw-r--r--. 2 boinc boinc     15845 Feb 20 08:33 start_atlas.sh
[2026-02-20 14:29:06] -rw-r--r--. 2 boinc boinc    597949 Feb 20 08:33 input.tar.gz
[2026-02-20 14:29:06] -rw-------. 1 boinc boinc 278530298 Feb 20 14:26 HITS.pool.root.1
[2026-02-20 14:29:06] -rw-------. 1 boinc boinc   3481600 Feb 20 14:29 result.tar.gz
14:29:07 (11469): run_atlas exited; CPU time 80552.839183
14:29:07 (11469): called boinc_finish(0)

</stderr_txt>
]]>

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