Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-20 14:00:07 (13176): vboxwrapper version 26210
2026-02-20 14:00:07 (13176): BOINC client version: 8.2.4
2026-02-20 14:00:12 (13176): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2026-02-20 14:00:12 (13176): Successfully copied 'init_data.xml' to the shared directory.
2026-02-20 14:00:13 (13176): Create VM. (boinc_36552a5832584f7f, slot#2)
2026-02-20 14:00:13 (13176): Setting Memory Size for VM. (4400MB)
2026-02-20 14:00:14 (13176): Setting CPU Count for VM. (4)
2026-02-20 14:00:14 (13176): Setting Chipset Options for VM.
2026-02-20 14:00:15 (13176): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-20 14:00:15 (13176): Setting Boot Options for VM.
2026-02-20 14:00:16 (13176): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-20 14:00:16 (13176): Enabling VM Network Access.
2026-02-20 14:00:16 (13176): Disabling USB Support for VM.
2026-02-20 14:00:17 (13176): Disabling COM Port Support for VM.
2026-02-20 14:00:17 (13176): Disabling LPT Port Support for VM.
2026-02-20 14:00:18 (13176): Disabling Audio Support for VM.
2026-02-20 14:00:18 (13176): Disabling Clipboard Support for VM.
2026-02-20 14:00:19 (13176): Disabling Drag and Drop Support for VM.
2026-02-20 14:00:19 (13176): Adding storage controller(s) to VM.
2026-02-20 14:00:19 (13176): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-20 14:00:21 (13176): Adding VirtualBox Guest Additions to VM.
2026-02-20 14:00:22 (13176): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-20 14:00:22 (13176): forwarding host port 55391 to guest port 80
2026-02-20 14:00:23 (13176): Enabling remote desktop for VM.
2026-02-20 14:00:23 (13176): Required extension pack not installed, remote desktop not enabled.
2026-02-20 14:00:23 (13176): Enabling shared directory for VM.
2026-02-20 14:00:23 (13176): Starting VM using VBoxManage interface. (boinc_36552a5832584f7f, slot#2)
2026-02-20 14:00:36 (13176): Successfully started VM. (PID = '788')
2026-02-20 14:00:36 (13176): Reporting VM Process ID to BOINC.
2026-02-20 14:00:36 (13176): Guest Log: BIOS: VirtualBox 6.1.12
2026-02-20 14:00:36 (13176): Guest Log: CPUID EDX: 0x178bfbff
2026-02-20 14:00:36 (13176): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-20 14:00:36 (13176): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-20 14:00:36 (13176): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-20 14:00:36 (13176): Detected: Web Application Enabled (http://localhost:55391)
2026-02-20 14:00:36 (13176): Preference change detected
2026-02-20 14:00:36 (13176): Setting CPU throttle for VM. (100%)
2026-02-20 14:00:37 (13176): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-20 14:00:38 (13176): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-20 14:00:38 (13176): Guest Log: BIOS: Booting from Hard Disk...
2026-02-20 14:00:43 (13176): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-20 14:00:43 (13176): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-20 14:00:43 (13176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-20 14:00:43 (13176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-20 14:00:43 (13176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-20 14:00:43 (13176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-20 14:00:43 (13176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-20 14:00:43 (13176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-20 14:00:43 (13176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-20 14:00:43 (13176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-20 14:00:43 (13176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-20 14:00:43 (13176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-20 14:00:43 (13176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-20 14:00:43 (13176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-20 14:00:43 (13176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-20 14:00:43 (13176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-20 14:00:43 (13176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-20 14:00:43 (13176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-20 14:00:43 (13176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-20 14:00:43 (13176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-20 14:00:43 (13176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-20 14:00:43 (13176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-20 14:00:44 (13176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-20 14:00:44 (13176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-20 14:00:44 (13176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-20 14:00:44 (13176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-20 14:00:44 (13176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-20 14:00:44 (13176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-20 14:00:44 (13176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-20 14:00:44 (13176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-20 14:00:44 (13176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-20 14:00:44 (13176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-20 14:01:00 (13176): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-20 14:01:00 (13176): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-02-20 14:01:44 (13176): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-20 14:01:44 (13176): Guest Log: 00:00:00.000531 main     Log opened 2026-02-20T14:01:41.609471000Z
2026-02-20 14:01:44 (13176): Guest Log: 00:00:00.001150 main     OS Product: Linux
2026-02-20 14:01:44 (13176): Guest Log: 00:00:00.001432 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-20 14:01:44 (13176): Guest Log: 00:00:00.001745 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-20 14:01:44 (13176): Guest Log: 00:00:00.001959 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-20 14:01:44 (13176): Guest Log: 00:00:00.001965 main     Process ID: 1296
2026-02-20 14:01:44 (13176): Guest Log: 00:00:00.001966 main     Package type: LINUX_64BITS_GENERIC
2026-02-20 14:01:44 (13176): Guest Log: 00:00:00.004568 main     5.2.32 r132073 started. Verbose level = 0
2026-02-20 14:01:45 (13176): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-20 14:01:45 (13176): Guest Log: [INFO] Mounting shared directory
2026-02-20 14:01:46 (13176): Guest Log: [INFO] Checking for init_data.xml
2026-02-20 14:01:54 (13176): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-20 14:01:54 (13176): Guest Log: [INFO] Detected branch: prod
2026-02-20 14:01:54 (13176): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-20 14:01:54 (13176): Guest Log: Copying input files
2026-02-20 14:01:54 (13176): Guest Log: 00:00:10.013305 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 012 139 617 000ns (GuestNow=1 771 614 113 761 404 000 ns GuestLast=1 771 596 101 621 787 000 ns fSetTimeLastLoop=true )
2026-02-20 14:02:16 (13176): Guest Log: Copied input files into RunAtlas.
2026-02-20 14:02:17 (13176): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-20 14:02:17 (13176): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-20 14:02:17 (13176): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-20 14:02:17 (13176): Guest Log: Further information can be found at the LHC@home message board.
2026-02-20 14:02:28 (13176): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-20 14:02:29 (13176): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-20 14:02:29 (13176): Guest Log: 2.6.3.0 1575 0 30140 156456 3 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-20 14:02:35 (13176): Guest Log: copied the webapp to /var/www
2026-02-20 14:02:35 (13176): Guest Log: ATHENA_PROC_NUMBER=4
2026-02-20 14:02:35 (13176): Guest Log: ATHENA_CORE_NUMBER=4
2026-02-20 14:02:36 (13176): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-20 14:02:36 (13176): Guest Log:  *** Starting ATLAS job. (PandaID=7021127480 taskID=48508763) ***
2026-02-20 15:43:58 (13176): Status Report: Elapsed Time: '6000.979753'
2026-02-20 15:43:58 (13176): Status Report: CPU Time: '18366.875000'
2026-02-20 17:28:08 (13176): Status Report: Elapsed Time: '12001.494843'
2026-02-20 17:28:08 (13176): Status Report: CPU Time: '43092.296875'
2026-02-20 19:13:27 (13176): Status Report: Elapsed Time: '18001.708986'
2026-02-20 19:13:27 (13176): Status Report: CPU Time: '67996.812500'
2026-02-20 20:58:01 (13176): Status Report: Elapsed Time: '24002.631878'
2026-02-20 20:58:01 (13176): Status Report: CPU Time: '91880.062500'
2026-02-20 21:03:24 (13176): Guest Log:  *** Job finished ***
2026-02-20 21:03:24 (13176): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-20 21:03:24 (13176): Guest Log: 2026-02-21 02:02:46,333 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-20 21:03:24 (13176): Guest Log: 2026-02-21 02:02:46,333 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-20 21:03:24 (13176): Guest Log: 2026-02-21 02:03:12,891 | INFO     | [monitor] cgroup control has ended
2026-02-20 21:03:24 (13176): Guest Log: 2026-02-21 02:03:15,012 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139847586998080)>', '<ExcThread(monitor, started 139846416856832)>']
2026-02-20 21:03:24 (13176): Guest Log: 2026-02-21 02:03:15,093 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-20 21:03:24 (13176): Guest Log: 2026-02-21 02:03:15,106 | INFO     | [monitor] control thread has ended
2026-02-20 21:03:24 (13176): Guest Log: 2026-02-21 02:03:20,019 | INFO     | all workflow threads have been joined
2026-02-20 21:03:24 (13176): Guest Log: 2026-02-21 02:03:20,019 | INFO     | end of generic workflow (traces error code: 0)
2026-02-20 21:03:24 (13176): Guest Log: 2026-02-21 02:03:20,019 | INFO     | traces error code: 0
2026-02-20 21:03:24 (13176): Guest Log: 2026-02-21 02:03:20,019 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-20 21:03:24 (13176): Guest Log: 2026-02-21 02:03:20,877 [wrapper] ==== pilot stdout END ====
2026-02-20 21:03:24 (13176): Guest Log: 2026-02-21 02:03:20,890 [wrapper] ==== wrapper stdout RESUME ====
2026-02-20 21:03:24 (13176): Guest Log: 2026-02-21 02:03:20,935 [wrapper] pilotpid: 5989
2026-02-20 21:03:24 (13176): Guest Log: 2026-02-21 02:03:20,950 [wrapper] Pilot exit status: 0
2026-02-20 21:03:24 (13176): Guest Log: 2026-02-21 02:03:21,173 [wrapper] pandaids: 7021127480
2026-02-20 21:03:24 (13176): Guest Log: 2026-02-21 02:03:21,367 [wrapper] cleanup supervisor_pilot 31567 5990
2026-02-20 21:03:24 (13176): Guest Log: 2026-02-21 02:03:21,422 [wrapper] Test setup, not cleaning
2026-02-20 21:03:24 (13176): Guest Log: 2026-02-21 02:03:21,441 [wrapper] apfmon messages muted
2026-02-20 21:03:24 (13176): Guest Log: 2026-02-21 02:03:21,468 [wrapper] ==== wrapper stdout END ====
2026-02-20 21:03:24 (13176): Guest Log: 2026-02-21 02:03:21,498 [wrapper] ==== wrapper stderr END ====
2026-02-20 21:03:24 (13176): Guest Log:  *** Error codes and diagnostics ***
2026-02-20 21:03:24 (13176): Guest Log:     "exeErrorCode": 0,
2026-02-20 21:03:24 (13176): Guest Log:     "exeErrorDiag": "",
2026-02-20 21:03:24 (13176): Guest Log:     "pilotErrorCode": 0,
2026-02-20 21:03:24 (13176): Guest Log:     "pilotErrorDiag": "",
2026-02-20 21:03:24 (13176): Guest Log:  *** Listing of results directory ***
2026-02-20 21:03:24 (13176): Guest Log: total 286096
2026-02-20 21:03:24 (13176): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 19 17:01 pilot3.tar.gz
2026-02-20 21:03:24 (13176): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 19 17:06 runpilot2-wrapper.sh
2026-02-20 21:03:24 (13176): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 19 17:10 queuedata.json
2026-02-20 21:03:24 (13176): Guest Log: -rwxr-xr-x. 1 atlas atlas      7945 Feb 20 19:02 init_data.xml
2026-02-20 21:03:24 (13176): Guest Log: -rwxr-xr-x. 1 atlas atlas    597947 Feb 20 19:02 input.tar.gz
2026-02-20 21:03:24 (13176): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb 20 19:02 start_atlas.sh
2026-02-20 21:03:24 (13176): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 20 19:02 EVNT.48508760._000965.pool.root.1 -> /data/./ATLAS.root_0
2026-02-20 21:03:24 (13176): Guest Log: -rw-r--r--. 1 atlas atlas      2552 Feb 20 19:02 pandaJob.out
2026-02-20 21:03:24 (13176): Guest Log: -rw-------. 1 atlas atlas   1001572 Feb 20 19:04 agis_schedconf.cvmfs.json
2026-02-20 21:03:24 (13176): Guest Log: -rw-------. 1 atlas atlas       426 Feb 20 19:04 workernode_map.json
2026-02-20 21:03:24 (13176): Guest Log: drwx------. 5 atlas atlas      4096 Feb 20 19:04 pilot3
2026-02-20 21:03:24 (13176): Guest Log: -rw-------. 1 atlas atlas 281129374 Feb 21 02:00 HITS.48508763._050002.pool.root.1
2026-02-20 21:03:24 (13176): Guest Log: -rw-------. 1 atlas atlas      1029 Feb 21 02:01 memory_monitor_summary.json
2026-02-20 21:03:24 (13176): Guest Log: -rw-------. 1 atlas atlas   1513015 Feb 21 02:02 agis_ddmendpoints.agis.ALL.json
2026-02-20 21:03:24 (13176): Guest Log: -rw-------. 1 atlas atlas    549578 Feb 21 02:02 log.48508763._050002.job.log.tgz.1
2026-02-20 21:03:24 (13176): Guest Log: -rw-------. 1 atlas atlas        95 Feb 21 02:02 pilot_heartbeat.json
2026-02-20 21:03:24 (13176): Guest Log: -rw-------. 1 atlas atlas      6370 Feb 21 02:02 heartbeat.json
2026-02-20 21:03:24 (13176): Guest Log: -rw-------. 1 atlas atlas      4988 Feb 21 02:03 pilotlog.txt
2026-02-20 21:03:24 (13176): Guest Log: -rw-------. 1 atlas atlas   3435377 Feb 21 02:03 log.48508763._050002.job.log.1
2026-02-20 21:03:24 (13176): Guest Log: -rw-------. 1 atlas atlas       357 Feb 21 02:03 output.list
2026-02-20 21:03:24 (13176): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 21 02:03 runtime_log
2026-02-20 21:03:24 (13176): Guest Log: -rw-------. 1 atlas atlas   4003840 Feb 21 02:03 result.tar.gz
2026-02-20 21:03:24 (13176): Guest Log: -rw-r--r--. 1 atlas atlas      8773 Feb 21 02:03 runtime_log.err
2026-02-20 21:03:24 (13176): Guest Log: -rw-------. 1 atlas atlas       666 Feb 21 02:03 K0UMDmreMD9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm1YyKDmSgvmxn.diag
2026-02-20 21:03:24 (13176): Guest Log: Looking for outputfile HITS.48508763._050002.pool.root.1
2026-02-20 21:03:24 (13176): Guest Log: HITS file was successfully produced
2026-02-20 21:03:24 (13176): Guest Log: -rw-------. 1 atlas atlas 281129374 Feb 21 02:00 /home/atlas/RunAtlas/HITS.48508763._050002.pool.root.1
2026-02-20 21:03:38 (13176): Guest Log: Successfully finished the ATLAS job!
2026-02-20 21:03:38 (13176): Guest Log: Copying the results back to the shared directory!
2026-02-20 21:03:39 (13176): Guest Log:  *** Contents of shared directory: ***
2026-02-20 21:03:39 (13176): Guest Log: total 943012
2026-02-20 21:03:39 (13176): Guest Log: -rwxrwxrwx. 1 root root 679882614 Feb 20 19:00 ATLAS.root_0
2026-02-20 21:03:39 (13176): Guest Log: -rwxrwxrwx. 1 root root 281129374 Feb 21 02:03 HITS.pool.root.1
2026-02-20 21:03:39 (13176): Guest Log: -rwxrwxrwx. 1 root root      7945 Feb 20 19:00 init_data.xml
2026-02-20 21:03:39 (13176): Guest Log: -rwxrwxrwx. 1 root root    597947 Feb 20 03:17 input.tar.gz
2026-02-20 21:03:39 (13176): Guest Log: -rwxrwxrwx. 1 root root   4003840 Feb 21 02:03 result.tar.gz
2026-02-20 21:03:39 (13176): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb 20 03:17 start_atlas.sh
2026-02-20 21:03:39 (13176): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-20 21:03:39 (13176): VM Completion File Detected.
2026-02-20 21:03:39 (13176): Powering off VM.
2026-02-20 21:03:47 (13176): Successfully stopped VM.
2026-02-20 21:03:47 (13176): Deregistering VM. (boinc_36552a5832584f7f, slot#2)
2026-02-20 21:03:48 (13176): Removing network bandwidth throttle group from VM.
2026-02-20 21:03:49 (13176): Removing VM from VirtualBox.
2026-02-20 21:03:56 (13176): called boinc_finish(0)

</stderr_txt>
]]>

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