Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:49:51 (2232423): wrapper (7.7.26015): starting
11:49:51 (2232423): wrapper: running run_atlas (--nthreads 11)
[2026-02-19 11:49:51] Arguments: --nthreads 11
[2026-02-19 11:49:51] Threads: 11
[2026-02-19 11:49:51] Checking for CVMFS
[2026-02-19 11:49:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-19 11:49:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-19 11:49:52] Running cvmfs_config stat atlas.cern.ch
[2026-02-19 11:49:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-19 11:49:52] 2.13.3.0 9798 948 65224 156417 0 188 30075041 32935937 3664 16776704 0 2265694 99.996 41105 33391 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-19 11:49:52] CVMFS is ok
[2026-02-19 11:49:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-19 11:49:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-19 11:49:52] Further information can be found at the LHC@home message board.
[2026-02-19 11:49:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-19 11:49:52] Checking for apptainer binary...
[2026-02-19 11:49:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-19 11:49:52] Running /usr/bin/apptainer --version
[2026-02-19 11:49:52] apptainer version 1.4.5-2.el9
[2026-02-19 11:49:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-19 11:49:52] c6-1-24-3.aglt2.org
[2026-02-19 11:49:52] apptainer works
[2026-02-19 11:49:52] Set ATHENA_PROC_NUMBER=11
[2026-02-19 11:49:52] Set ATHENA_CORE_NUMBER=11
[2026-02-19 11:49:52] Starting ATLAS job with PandaID=7021111203
[2026-02-19 11:49:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-19 13:14:34]  *** The last 200 lines of the pilot log: ***
[2026-02-19 13:14:34]  is_altstaged=None
[2026-02-19 13:14:34]  is_tar=False
[2026-02-19 13:14:34]  lfn=log.48508763._043882.job.log.tgz.1
[2026-02-19 13:14:34]  mtime=0
[2026-02-19 13:14:34]  protocol_id=None
[2026-02-19 13:14:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-19 13:14:34]  replicas=None
[2026-02-19 13:14:34]  scope=mc23_13p6TeV
[2026-02-19 13:14:34]  status=None
[2026-02-19 13:14:34]  status_code=0
[2026-02-19 13:14:34]  storage_token=
[2026-02-19 13:14:34]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-7021111203/log.48508763._043882.job.log.tgz.1
[2026-02-19 13:14:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ba/6a/log.48508763._043882.job.log.tgz.1
[2026-02-19 13:14:34]  workdir=None
[2026-02-19 13:14:34] ]
[2026-02-19 13:14:34] 2026-02-19 18:13:58,599 | INFO     | transferring file log.48508763._043882.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-7021111203/log.48508763._043882.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-19 13:14:34] 2026-02-19 18:13:58,599 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-7021111203/log.48508763._043882.job.log.tgz.1 /tmp/boinchome/slots/1/log.48508763._043882.job
[2026-02-19 13:14:34] 2026-02-19 18:13:58,616 | INFO     | adding to output.list: log.48508763._043882.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ba/6a/log.48508763._043882.job.log.tg
[2026-02-19 13:14:34] 2026-02-19 18:13:58,617 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-19 13:14:34] 2026-02-19 18:13:58,617 | INFO     | summary of transferred files:
[2026-02-19 13:14:34] 2026-02-19 18:13:58,617 | INFO     |  -- lfn=log.48508763._043882.job.log.tgz.1, status_code=0, status=transferred
[2026-02-19 13:14:34] 2026-02-19 18:13:58,617 | INFO     | stage-out finished correctly
[2026-02-19 13:14:34] 2026-02-19 18:13:59,079 | INFO     | monitor loop #379: job 0:7021111203 is in state 'finished'
[2026-02-19 13:14:34] 2026-02-19 18:13:59,079 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-19 13:14:34] 2026-02-19 18:14:00,340 | INFO     | time since job start (5034s) is within the limit (349056.0s)
[2026-02-19 13:14:34] 2026-02-19 18:14:01,028 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-19 13:14:34] 2026-02-19 18:14:01,586 | INFO     | monitor loop #380: job 0:7021111203 is in state 'finished'
[2026-02-19 13:14:34] 2026-02-19 18:14:01,586 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-19 13:14:34] 2026-02-19 18:14:01,617 | INFO     | PID=2236094 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-19 13:14:34] 2026-02-19 18:14:01,618 | INFO     | .. there are 5 such processes running
[2026-02-19 13:14:34] 2026-02-19 18:14:01,981 | INFO     | job 7021111203 has state=finished
[2026-02-19 13:14:34] 2026-02-19 18:14:01,981 | INFO     | preparing for final server update for job 7021111203 in state='finished'
[2026-02-19 13:14:34] 2026-02-19 18:14:02,039 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-19 13:14:34] 2026-02-19 18:14:02,040 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7021111203/jobReport.json
[2026-02-19 13:14:34] 2026-02-19 18:14:02,042 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-02-19 13:14:34] 2026-02-19 18:14:02,042 | INFO     | this job has now completed (state=finished)
[2026-02-19 13:14:34] 2026-02-19 18:14:02,042 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-19 13:14:34] 2026-02-19 18:14:02,042 | INFO     | log transfer has been attempted: DONE
[2026-02-19 13:14:34] 2026-02-19 18:14:02,042 | INFO     | job 7021111203 has finished - writing final server update
[2026-02-19 13:14:34] 2026-02-19 18:14:02,043 | INFO     | total number of processed events: 400 (read)
[2026-02-19 13:14:34] 2026-02-19 18:14:02,052 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7021111203/memory_monitor_summary.json (trf name=prmon)
[2026-02-19 13:14:34] 2026-02-19 18:14:02,052 | INFO     | extracted standard info from prmon json
[2026-02-19 13:14:34] 2026-02-19 18:14:02,052 | INFO     | extracted standard memory fields from prmon json
[2026-02-19 13:14:34] 2026-02-19 18:14:02,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-19 13:14:34] 2026-02-19 18:14:02,053 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-19 13:14:34] 2026-02-19 18:14:02,053 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-19 13:14:34] 2026-02-19 18:14:02,054 | INFO     | fitting pss+swap vs Time
[2026-02-19 13:14:34] 2026-02-19 18:14:02,054 | INFO     | sum of square deviations: 136095575.0
[2026-02-19 13:14:34] 2026-02-19 18:14:02,055 | INFO     | sum of deviations: -4226442522.9999995
[2026-02-19 13:14:34] 2026-02-19 18:14:02,055 | INFO     | mean x: 1771522419.5
[2026-02-19 13:14:34] 2026-02-19 18:14:02,055 | INFO     | mean y: 2774261.710526316
[2026-02-19 13:14:34] 2026-02-19 18:14:02,055 | INFO     | intersect: 55017330644.03702
[2026-02-19 13:14:34] 2026-02-19 18:14:02,055 | INFO     | chi2: 0.0503844602572876
[2026-02-19 13:14:34] 2026-02-19 18:14:02,055 | INFO     | current memory leak: -31.05 B/s (using 76 data points, chi2=0.05)
[2026-02-19 13:14:34] 2026-02-19 18:14:02,056 | INFO     | could have reported an average CPU frequency of 3099 MHz (6 samples)
[2026-02-19 13:14:34] 2026-02-19 18:14:02,056 | INFO     | ..............................
[2026-02-19 13:14:34] 2026-02-19 18:14:02,056 | INFO     | . Timing measurements:
[2026-02-19 13:14:34] 2026-02-19 18:14:02,056 | INFO     | . get job = 0 s
[2026-02-19 13:14:34] 2026-02-19 18:14:02,056 | INFO     | . initial setup = 6 s
[2026-02-19 13:14:34] 2026-02-19 18:14:02,056 | INFO     | . payload setup = 5 s
[2026-02-19 13:14:34] 2026-02-19 18:14:02,056 | INFO     | . stage-in = 0 s
[2026-02-19 13:14:34] 2026-02-19 18:14:02,056 | INFO     | . payload execution = 5010 s
[2026-02-19 13:14:34] 2026-02-19 18:14:02,056 | INFO     | . stage-out = 0 s
[2026-02-19 13:14:34] 2026-02-19 18:14:02,056 | INFO     | . log creation = 0 s
[2026-02-19 13:14:34] 2026-02-19 18:14:02,056 | INFO     | ..............................
[2026-02-19 13:14:34] 2026-02-19 18:14:02,501 | INFO     | 
[2026-02-19 13:14:34] 2026-02-19 18:14:02,501 | INFO     | job summary report
[2026-02-19 13:14:34] 2026-02-19 18:14:02,502 | INFO     | --------------------------------------------------
[2026-02-19 13:14:34] 2026-02-19 18:14:02,502 | INFO     | PanDA job id: 7021111203
[2026-02-19 13:14:34] 2026-02-19 18:14:02,502 | INFO     | task id: 48508763
[2026-02-19 13:14:34] 2026-02-19 18:14:02,502 | INFO     | errors: (none)
[2026-02-19 13:14:34] 2026-02-19 18:14:02,502 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-19 13:14:34] 2026-02-19 18:14:02,502 | INFO     | pilot state: finished 
[2026-02-19 13:14:34] 2026-02-19 18:14:02,502 | INFO     | transexitcode: 0
[2026-02-19 13:14:34] 2026-02-19 18:14:02,502 | INFO     | exeerrorcode: 0
[2026-02-19 13:14:34] 2026-02-19 18:14:02,502 | INFO     | exeerrordiag: 
[2026-02-19 13:14:34] 2026-02-19 18:14:02,502 | INFO     | exitcode: 0
[2026-02-19 13:14:34] 2026-02-19 18:14:02,502 | INFO     | exitmsg: OK
[2026-02-19 13:14:34] 2026-02-19 18:14:02,502 | INFO     | cpuconsumptiontime: 50409 s
[2026-02-19 13:14:34] 2026-02-19 18:14:02,502 | INFO     | nevents: 400
[2026-02-19 13:14:34] 2026-02-19 18:14:02,502 | INFO     | neventsw: 0
[2026-02-19 13:14:34] 2026-02-19 18:14:02,502 | INFO     | pid: 2242486
[2026-02-19 13:14:34] 2026-02-19 18:14:02,503 | INFO     | pgrp: 2242486
[2026-02-19 13:14:34] 2026-02-19 18:14:02,503 | INFO     | corecount: 11
[2026-02-19 13:14:34] 2026-02-19 18:14:02,503 | INFO     | event service: False
[2026-02-19 13:14:34] 2026-02-19 18:14:02,503 | INFO     | sizes: {0: 2282260, 11: 2282260, 5018: 2308619, 5021: 2317617, 5023: 2317673, 5024: 2317867}
[2026-02-19 13:14:34] 2026-02-19 18:14:02,503 | INFO     | --------------------------------------------------
[2026-02-19 13:14:34] 2026-02-19 18:14:02,503 | INFO     | 
[2026-02-19 13:14:34] 2026-02-19 18:14:02,503 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-02-19 13:14:34] 2026-02-19 18:14:02,522 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-19 13:14:34] 2026-02-19 18:14:02,522 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-19 13:14:34] 2026-02-19 18:14:02,522 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-19 13:14:34] 2026-02-19 18:14:02,522 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-19 13:14:34] 2026-02-19 18:14:02,522 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-19 13:14:34] 2026-02-19 18:14:02,522 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-19 13:14:34] 2026-02-19 18:14:02,522 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-19 13:14:34] 2026-02-19 18:14:02,522 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-19 13:14:34] 2026-02-19 18:14:02,523 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-19 13:14:34] 2026-02-19 18:14:02,523 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-19 13:14:34] 2026-02-19 18:14:02,523 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-19 13:14:34] 2026-02-19 18:14:02,523 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-19 13:14:34] 2026-02-19 18:14:02,523 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-19 13:14:34] 2026-02-19 18:14:02,523 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-19 13:14:34] 2026-02-19 18:14:02,523 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-19 13:14:34] 2026-02-19 18:14:02,523 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-19 13:14:34] 2026-02-19 18:14:02,523 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-19 13:14:34] 2026-02-19 18:14:02,523 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-19 13:14:34] 2026-02-19 18:14:02,523 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-19 13:14:34] 2026-02-19 18:14:02,523 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-19 13:14:34] 2026-02-19 18:14:02,523 | INFO     | job 7021111203 has completed (purged errors)
[2026-02-19 13:14:34] 2026-02-19 18:14:02,524 | INFO     | overall cleanup function is called
[2026-02-19 13:14:34] 2026-02-19 18:14:03,530 | INFO     | --- collectZombieJob: --- 10, [2242486]
[2026-02-19 13:14:34] 2026-02-19 18:14:03,531 | INFO     | zombie collector waiting for pid 2242486
[2026-02-19 13:14:34] 2026-02-19 18:14:03,531 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-19 13:14:34] 2026-02-19 18:14:03,531 | INFO     | collected zombie processes
[2026-02-19 13:14:34] 2026-02-19 18:14:03,531 | INFO     | will attempt to kill all subprocesses of pid=2242486
[2026-02-19 13:14:34] 2026-02-19 18:14:03,753 | INFO     | process IDs to be killed: [2242486] (in reverse order)
[2026-02-19 13:14:34] 2026-02-19 18:14:03,821 | WARNING  | found no corresponding commands to process id(s)
[2026-02-19 13:14:34] 2026-02-19 18:14:03,821 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-19 13:14:34] 2026-02-19 18:14:03,829 | INFO     | did not find any defunct processes belonging to 2242486
[2026-02-19 13:14:34] 2026-02-19 18:14:03,836 | INFO     | did not find any defunct processes belonging to 2242486
[2026-02-19 13:14:34] 2026-02-19 18:14:03,836 | INFO     | ready for new job
[2026-02-19 13:14:34] 2026-02-19 18:14:03,836 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-19 13:14:34] 2026-02-19 18:14:03,838 | INFO     | **************************************
[2026-02-19 13:14:34] 2026-02-19 18:14:03,838 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-19 13:14:34] 2026-02-19 18:14:03,838 | INFO     | **************************************
[2026-02-19 13:14:34] 2026-02-19 18:14:03,838 | INFO     | 
[2026-02-19 13:14:34] 2026-02-19 18:14:03,841 | INFO     | architecture information:
[2026-02-19 13:14:34] 2026-02-19 18:14:03,841 | INFO     | executing command: cat /etc/os-release
[2026-02-19 13:14:34] 2026-02-19 18:14:03,855 | INFO     | cat /etc/os-release:
[2026-02-19 13:14:34] NAME="CentOS Linux"
[2026-02-19 13:14:34] VERSION="7 (Core)"
[2026-02-19 13:14:34] ID="centos"
[2026-02-19 13:14:34] ID_LIKE="rhel fedora"
[2026-02-19 13:14:34] VERSION_ID="7"
[2026-02-19 13:14:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-19 13:14:34] ANSI_COLOR="0;31"
[2026-02-19 13:14:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-19 13:14:34] HOME_URL="https://www.centos.org/"
[2026-02-19 13:14:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-19 13:14:34] 
[2026-02-19 13:14:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-19 13:14:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-19 13:14:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-19 13:14:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-19 13:14:34] 
[2026-02-19 13:14:34] 2026-02-19 18:14:03,855 | INFO     | **************************************
[2026-02-19 13:14:34] 2026-02-19 18:14:04,358 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-19 13:14:34] 2026-02-19 18:14:04,375 | INFO     | sufficient remaining disk space (68862083072 B)
[2026-02-19 13:14:34] 2026-02-19 18:14:04,375 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-19 13:14:34] 2026-02-19 18:14:04,375 | INFO     | current server update state: UPDATING_FINAL
[2026-02-19 13:14:34] 2026-02-19 18:14:04,375 | INFO     | update_server=False
[2026-02-19 13:14:34] 2026-02-19 18:14:04,375 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-19 13:14:34] 2026-02-19 18:14:04,376 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-19 13:14:34] 2026-02-19 18:14:04,762 | INFO     | all job control threads have been joined
[2026-02-19 13:14:34] 2026-02-19 18:14:04,863 | INFO     | all data control threads have been joined
[2026-02-19 13:14:34] 2026-02-19 18:14:05,093 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-19 13:14:34] 2026-02-19 18:14:05,094 | INFO     | aborting loop
[2026-02-19 13:14:34] 2026-02-19 18:14:05,381 | INFO     | [job] retrieve thread has finished
[2026-02-19 13:14:34] 2026-02-19 18:14:05,437 | INFO     | [job] create_data_payload thread has finished
[2026-02-19 13:14:34] 2026-02-19 18:14:05,443 | INFO     | [payload] validate_pre thread has finished
[2026-02-19 13:14:34] 2026-02-19 18:14:05,472 | INFO     | all payload control threads have been joined
[2026-02-19 13:14:34] 2026-02-19 18:14:05,514 | INFO     | [payload] validate_post thread has finished
[2026-02-19 13:14:34] 2026-02-19 18:14:05,715 | INFO     | [payload] failed_post thread has finished
[2026-02-19 13:14:34] 2026-02-19 18:14:05,767 | INFO     | [job] control thread has finished
[2026-02-19 13:14:34] 2026-02-19 18:14:05,869 | INFO     | [data] control thread has finished
[2026-02-19 13:14:34] 2026-02-19 18:14:06,016 | INFO     | [data] copytool_in thread has finished
[2026-02-19 13:14:34] 2026-02-19 18:14:06,099 | INFO     | [job] job monitor thread has finished
[2026-02-19 13:14:34] 2026-02-19 18:14:06,381 | INFO     | [data] copytool_out thread has finished
[2026-02-19 13:14:34] 2026-02-19 18:14:06,438 | INFO     | [payload] execute_payloads thread has finished
[2026-02-19 13:14:34] 2026-02-19 18:14:06,477 | INFO     | [payload] control thread has finished
[2026-02-19 13:14:34] 2026-02-19 18:14:06,616 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-19 13:14:34] 2026-02-19 18:14:06,769 | INFO     | [job] validate thread has finished
[2026-02-19 13:14:34] 2026-02-19 18:14:07,114 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-19 13:14:34] 2026-02-19 18:14:07,146 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-19 13:14:34] 2026-02-19 18:14:08,152 | INFO     | [job] queue monitor thread has finished
[2026-02-19 13:14:34] 2026-02-19 18:14:11,120 | INFO     | [data] queue_monitor thread has finished
[2026-02-19 13:14:34] 2026-02-19 18:14:14,029 | INFO     | [monitor] cgroup control has ended
[2026-02-19 13:14:34] 2026-02-19 18:14:15,642 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140060685788992)>', '<ExcThread(monitor, started 140060192126720)>']
[2026-02-19 13:14:34] 2026-02-19 18:14:20,667 | INFO     | all workflow threads have been joined
[2026-02-19 13:14:34] 2026-02-19 18:14:20,668 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-19 13:14:34] 2026-02-19 18:14:20,668 | INFO     | traces error code: 0
[2026-02-19 13:14:34] 2026-02-19 18:14:20,668 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-19 13:14:34] 2026-02-19 18:14:33,992 | INFO     | PID=2236094 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-19 13:14:34] 2026-02-19 18:14:33,993 | INFO     | .. there are 5 such processes running
[2026-02-19 13:14:34] 2026-02-19 18:14:33,994 | INFO     | found 0 job(s) in 20 queues
[2026-02-19 13:14:34] 2026-02-19 18:14:33,994 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-19 13:14:34] 2026-02-19 18:14:33,994 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-19 13:14:34] 2026-02-19 18:14:33,994 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-19 13:14:34] 2026-02-19 18:14:33,994 | INFO     | [monitor] control thread has ended
[2026-02-19 13:14:34] 2026-02-19 18:14:34,139 [wrapper] ==== pilot stdout END ====
[2026-02-19 13:14:34] 2026-02-19 18:14:34,143 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-19 13:14:34] 2026-02-19 18:14:34,145 [wrapper] pilotpid: 2236094
[2026-02-19 13:14:34] 2026-02-19 18:14:34,148 [wrapper] Pilot exit status: 0
[2026-02-19 13:14:34] 2026-02-19 18:14:34,158 [wrapper] pandaids: 7021111203
[2026-02-19 13:14:34] 2026-02-19 18:14:34,211 [wrapper] cleanup supervisor_pilot 2437785 2236095
[2026-02-19 13:14:34] 2026-02-19 18:14:34,214 [wrapper] Test setup, not cleaning
[2026-02-19 13:14:34] 2026-02-19 18:14:34,216 [wrapper] apfmon messages muted
[2026-02-19 13:14:34] 2026-02-19 18:14:34,219 [wrapper] ==== wrapper stdout END ====
[2026-02-19 13:14:34] 2026-02-19 18:14:34,222 [wrapper] ==== wrapper stderr END ====
[2026-02-19 13:14:34]  *** Error codes and diagnostics ***
[2026-02-19 13:14:34]     "exeErrorCode": 0,
[2026-02-19 13:14:34]     "exeErrorDiag": "",
[2026-02-19 13:14:34]     "pilotErrorCode": 0,
[2026-02-19 13:14:34]     "pilotErrorDiag": "",
[2026-02-19 13:14:34]  *** Listing of results directory ***
[2026-02-19 13:14:34] total 938572
[2026-02-19 13:14:34] -rw-r--r--. 1 boincer umatlas    584627 Feb 19 05:23 pilot3.tar.gz
[2026-02-19 13:14:34] -rwx------. 1 boincer umatlas     36322 Feb 19 05:24 runpilot2-wrapper.sh
[2026-02-19 13:14:34] -rw-r--r--. 1 boincer umatlas      5111 Feb 19 05:25 queuedata.json
[2026-02-19 13:14:34] -rw-r--r--. 1 boincer umatlas       100 Feb 19 11:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-19 13:14:34] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 19 11:49 run_atlas
[2026-02-19 13:14:34] -rw-r--r--. 1 boincer umatlas       105 Feb 19 11:49 job.xml
[2026-02-19 13:14:34] -rw-r--r--. 2 boincer umatlas 678447215 Feb 19 11:49 EVNT.48508760._000843.pool.root.1
[2026-02-19 13:14:34] -rw-r--r--. 2 boincer umatlas     15845 Feb 19 11:49 start_atlas.sh
[2026-02-19 13:14:34] drwxrwx--x. 2 boincer umatlas      4096 Feb 19 11:49 shared
[2026-02-19 13:14:34] -rw-r--r--. 2 boincer umatlas    597954 Feb 19 11:49 input.tar.gz
[2026-02-19 13:14:34] -rw-r--r--. 1 boincer umatlas         0 Feb 19 11:49 boinc_lockfile
[2026-02-19 13:14:34] -rw-r--r--. 1 boincer umatlas      2551 Feb 19 11:49 pandaJob.out
[2026-02-19 13:14:34] -rw-------. 1 boincer umatlas        57 Feb 19 11:49 setup.sh.local
[2026-02-19 13:14:34] -rw-------. 1 boincer umatlas   1001583 Feb 19 11:50 agis_schedconf.cvmfs.json
[2026-02-19 13:14:34] -rw-------. 1 boincer umatlas   1513015 Feb 19 11:50 agis_ddmendpoints.agis.ALL.json
[2026-02-19 13:14:34] -rw-------. 1 boincer umatlas       442 Feb 19 11:50 workernode_map.json
[2026-02-19 13:14:34] drwx------. 5 boincer umatlas      4096 Feb 19 11:50 pilot3
[2026-02-19 13:14:34] -rw-r--r--. 1 boincer umatlas      6843 Feb 19 13:09 init_data.xml
[2026-02-19 13:14:34] -rw-------. 1 boincer umatlas 276497499 Feb 19 13:13 HITS.48508763._043882.pool.root.1
[2026-02-19 13:14:34] -rw-r--r--. 1 boincer umatlas       531 Feb 19 13:13 boinc_task_state.xml
[2026-02-19 13:14:34] -rw-------. 1 boincer umatlas      1035 Feb 19 13:13 memory_monitor_summary.json
[2026-02-19 13:14:34] -rw-------. 1 boincer umatlas    368634 Feb 19 13:13 log.48508763._043882.job.log.tgz.1
[2026-02-19 13:14:34] -rw-------. 1 boincer umatlas      6387 Feb 19 13:14 heartbeat.json
[2026-02-19 13:14:34] -rw-r--r--. 1 boincer umatlas      8192 Feb 19 13:14 boinc_mmap_file
[2026-02-19 13:14:34] -rw-r--r--. 1 boincer umatlas        27 Feb 19 13:14 wrapper_checkpoint.txt
[2026-02-19 13:14:34] -rw-------. 1 boincer umatlas        95 Feb 19 13:14 pilot_heartbeat.json
[2026-02-19 13:14:34] -rw-------. 1 boincer umatlas       822 Feb 19 13:14 pilotlog.txt
[2026-02-19 13:14:34] -rw-------. 1 boincer umatlas    741968 Feb 19 13:14 log.48508763._043882.job.log.1
[2026-02-19 13:14:34] -rw-------. 1 boincer umatlas       357 Feb 19 13:14 output.list
[2026-02-19 13:14:34] -rw-r--r--. 1 boincer umatlas       620 Feb 19 13:14 runtime_log
[2026-02-19 13:14:34] -rw-------. 1 boincer umatlas   1126400 Feb 19 13:14 result.tar.gz
[2026-02-19 13:14:34] -rw-------. 1 boincer umatlas       652 Feb 19 13:14 vMxKDmrNGD9n9Rq4apOajLDm4fhM0noT9bVooX4SDmiGwKDm4ZBumn.diag
[2026-02-19 13:14:34] -rw-r--r--. 1 boincer umatlas      9348 Feb 19 13:14 runtime_log.err
[2026-02-19 13:14:34] -rw-r--r--. 1 boincer umatlas     21576 Feb 19 13:14 stderr.txt
[2026-02-19 13:14:34] HITS file was successfully produced:
[2026-02-19 13:14:34] -rw-------. 1 boincer umatlas 276497499 Feb 19 13:13 shared/HITS.pool.root.1
[2026-02-19 13:14:34]  *** Contents of shared directory: ***
[2026-02-19 13:14:34] total 934276
[2026-02-19 13:14:34] -rw-r--r--. 2 boincer umatlas 678447215 Feb 19 11:49 ATLAS.root_0
[2026-02-19 13:14:34] -rw-r--r--. 2 boincer umatlas     15845 Feb 19 11:49 start_atlas.sh
[2026-02-19 13:14:34] -rw-r--r--. 2 boincer umatlas    597954 Feb 19 11:49 input.tar.gz
[2026-02-19 13:14:34] -rw-------. 1 boincer umatlas 276497499 Feb 19 13:13 HITS.pool.root.1
[2026-02-19 13:14:34] -rw-------. 1 boincer umatlas   1126400 Feb 19 13:14 result.tar.gz
13:14:35 (2232423): run_atlas exited; CPU time 50510.446493
13:14:35 (2232423): called boinc_finish(0)

</stderr_txt>
]]>

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