Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-19 18:39:28 (26768): vboxwrapper version 26210
2026-02-19 18:39:28 (26768): BOINC client version: 7.9.3
2026-02-19 18:39:29 (26768): Detected: VirtualBox VboxManage Interface (Version: 5.2.42)
2026-02-19 18:39:29 (26768): Successfully copied 'init_data.xml' to the shared directory.
2026-02-19 18:39:29 (26768): Create VM. (boinc_056f43d76926b319, slot#0)
2026-02-19 18:39:29 (26768): Setting Memory Size for VM. (4300MB)
2026-02-19 18:39:29 (26768): Setting CPU Count for VM. (3)
2026-02-19 18:39:30 (26768): Setting Chipset Options for VM.
2026-02-19 18:39:30 (26768): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-19 18:39:30 (26768): Setting Boot Options for VM.
2026-02-19 18:39:30 (26768): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-19 18:39:30 (26768): Enabling VM Network Access.
2026-02-19 18:39:30 (26768): Disabling USB Support for VM.
2026-02-19 18:39:30 (26768): Disabling COM Port Support for VM.
2026-02-19 18:39:30 (26768): Disabling LPT Port Support for VM.
2026-02-19 18:39:31 (26768): Disabling Audio Support for VM.
2026-02-19 18:39:31 (26768): Disabling Clipboard Support for VM.
2026-02-19 18:39:31 (26768): Disabling Drag and Drop Support for VM.
2026-02-19 18:39:31 (26768): Adding storage controller(s) to VM.
2026-02-19 18:39:31 (26768): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-19 18:39:31 (26768): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-19 18:39:32 (26768): forwarding host port 59443 to guest port 80
2026-02-19 18:39:32 (26768): Enabling remote desktop for VM.
2026-02-19 18:39:32 (26768): Required extension pack not installed, remote desktop not enabled.
2026-02-19 18:39:32 (26768): Enabling shared directory for VM.
2026-02-19 18:39:32 (26768): Starting VM using VBoxManage interface. (boinc_056f43d76926b319, slot#0)
2026-02-19 18:39:33 (26768): Successfully started VM. (PID = '27161')
2026-02-19 18:39:33 (26768): Reporting VM Process ID to BOINC.
2026-02-19 18:39:33 (26768): Guest Log: BIOS: VirtualBox 5.2.41
2026-02-19 18:39:33 (26768): Guest Log: CPUID EDX: 0x178bfbff
2026-02-19 18:39:33 (26768): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-19 18:39:33 (26768): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-19 18:39:33 (26768): Detected: Web Application Enabled (http://localhost:59443)
2026-02-19 18:39:33 (26768): Preference change detected
2026-02-19 18:39:33 (26768): Setting CPU throttle for VM. (75%)
2026-02-19 18:39:36 (26768): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-19 18:39:36 (26768): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-19 18:39:36 (26768): Guest Log: BIOS: Booting from Hard Disk...
2026-02-19 18:39:41 (26768): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-19 18:39:41 (26768): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-19 18:39:41 (26768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-19 18:39:49 (26768): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-19 18:39:49 (26768): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-02-19 18:40:03 (26768): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-19 18:40:03 (26768): Guest Log: 00:00:00.000258 main     Log opened 2026-02-19T17:40:02.222720000Z
2026-02-19 18:40:03 (26768): Guest Log: 00:00:00.000424 main     OS Product: Linux
2026-02-19 18:40:03 (26768): Guest Log: 00:00:00.000482 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-19 18:40:03 (26768): Guest Log: 00:00:00.000528 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-19 18:40:03 (26768): Guest Log: 00:00:00.000591 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-19 18:40:03 (26768): Guest Log: 00:00:00.000593 main     Process ID: 1263
2026-02-19 18:40:03 (26768): Guest Log: 00:00:00.000594 main     Package type: LINUX_64BITS_GENERIC
2026-02-19 18:40:03 (26768): Guest Log: 00:00:00.003299 main     5.2.32 r132073 started. Verbose level = 0
2026-02-19 18:40:04 (26768): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-19 18:40:04 (26768): Guest Log: [INFO] Mounting shared directory
2026-02-19 18:40:04 (26768): Guest Log: [INFO] Checking for init_data.xml
2026-02-19 18:40:14 (26768): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-19 18:40:14 (26768): Guest Log: [INFO] Detected branch: prod
2026-02-19 18:40:15 (26768): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-19 18:40:15 (26768): Guest Log: Copying input files
2026-02-19 18:40:29 (26768): Guest Log: Copied input files into RunAtlas.
2026-02-19 18:40:29 (26768): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-19 18:40:29 (26768): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-19 18:40:29 (26768): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-19 18:40:29 (26768): Guest Log: Further information can be found at the LHC@home message board.
2026-02-19 18:40:41 (26768): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-19 18:40:41 (26768): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-19 18:40:41 (26768): Guest Log: 2.6.3.0 1548 0 32184 156418 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-19 18:40:44 (26768): Guest Log: copied the webapp to /var/www
2026-02-19 18:40:44 (26768): Guest Log: ATHENA_PROC_NUMBER=3
2026-02-19 18:40:44 (26768): Guest Log: ATHENA_CORE_NUMBER=3
2026-02-19 18:40:45 (26768): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-19 18:40:45 (26768): Guest Log:  *** Starting ATLAS job. (PandaID=7021105909 taskID=48508763) ***
2026-02-19 20:18:34 (26768): Status Report: Elapsed Time: '6000.235731'
2026-02-19 20:18:34 (26768): Status Report: CPU Time: '11932.140000'
2026-02-19 21:57:35 (26768): Status Report: Elapsed Time: '12000.235731'
2026-02-19 21:57:35 (26768): Status Report: CPU Time: '25268.950000'
2026-02-19 23:36:35 (26768): Status Report: Elapsed Time: '18000.235731'
2026-02-19 23:36:35 (26768): Status Report: CPU Time: '38659.530000'
2026-02-20 01:15:36 (26768): Status Report: Elapsed Time: '24000.235731'
2026-02-20 01:15:36 (26768): Status Report: CPU Time: '52051.670000'
2026-02-20 02:54:36 (26768): Status Report: Elapsed Time: '30000.235731'
2026-02-20 02:54:36 (26768): Status Report: CPU Time: '65433.180000'
2026-02-20 04:33:36 (26768): Status Report: Elapsed Time: '36000.235731'
2026-02-20 04:33:36 (26768): Status Report: CPU Time: '78819.980000'
2026-02-20 06:12:37 (26768): Status Report: Elapsed Time: '42000.235731'
2026-02-20 06:12:37 (26768): Status Report: CPU Time: '92211.750000'
2026-02-20 06:57:45 (26768): Guest Log:  *** Job finished ***
2026-02-20 06:57:45 (26768): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-20 06:57:45 (26768): Guest Log: 2026-02-20 05:57:14,330 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-20 06:57:45 (26768): Guest Log: 2026-02-20 05:57:14,330 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-20 06:57:45 (26768): Guest Log: 2026-02-20 05:57:35,914 | INFO     | [monitor] cgroup control has ended
2026-02-20 06:57:45 (26768): Guest Log: 2026-02-20 05:57:37,485 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140318891906880)>', '<ExcThread(monitor, started 140317772732160)>']
2026-02-20 06:57:45 (26768): Guest Log: 2026-02-20 05:57:38,392 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-20 06:57:45 (26768): Guest Log: 2026-02-20 05:57:38,393 | INFO     | [monitor] control thread has ended
2026-02-20 06:57:45 (26768): Guest Log: 2026-02-20 05:57:42,492 | INFO     | all workflow threads have been joined
2026-02-20 06:57:45 (26768): Guest Log: 2026-02-20 05:57:42,492 | INFO     | end of generic workflow (traces error code: 0)
2026-02-20 06:57:45 (26768): Guest Log: 2026-02-20 05:57:42,493 | INFO     | traces error code: 0
2026-02-20 06:57:45 (26768): Guest Log: 2026-02-20 05:57:42,493 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-20 06:57:45 (26768): Guest Log: 2026-02-20 05:57:42,719 [wrapper] ==== pilot stdout END ====
2026-02-20 06:57:45 (26768): Guest Log: 2026-02-20 05:57:42,727 [wrapper] ==== wrapper stdout RESUME ====
2026-02-20 06:57:45 (26768): Guest Log: 2026-02-20 05:57:42,737 [wrapper] pilotpid: 5939
2026-02-20 06:57:45 (26768): Guest Log: 2026-02-20 05:57:42,746 [wrapper] Pilot exit status: 0
2026-02-20 06:57:45 (26768): Guest Log: 2026-02-20 05:57:43,640 [wrapper] pandaids: 7021105909
2026-02-20 06:57:45 (26768): Guest Log: 2026-02-20 05:57:43,690 [wrapper] cleanup supervisor_pilot  4868 5940
2026-02-20 06:57:45 (26768): Guest Log: 2026-02-20 05:57:43,704 [wrapper] Test setup, not cleaning
2026-02-20 06:57:45 (26768): Guest Log: 2026-02-20 05:57:43,713 [wrapper] apfmon messages muted
2026-02-20 06:57:45 (26768): Guest Log: 2026-02-20 05:57:43,722 [wrapper] ==== wrapper stdout END ====
2026-02-20 06:57:45 (26768): Guest Log: 2026-02-20 05:57:43,732 [wrapper] ==== wrapper stderr END ====
2026-02-20 06:57:45 (26768): Guest Log:  *** Error codes and diagnostics ***
2026-02-20 06:57:45 (26768): Guest Log:     "exeErrorCode": 0,
2026-02-20 06:57:45 (26768): Guest Log:     "exeErrorDiag": "",
2026-02-20 06:57:45 (26768): Guest Log:     "pilotErrorCode": 0,
2026-02-20 06:57:45 (26768): Guest Log:     "pilotErrorDiag": "",
2026-02-20 06:57:45 (26768): Guest Log:  *** Listing of results directory ***
2026-02-20 06:57:45 (26768): Guest Log: total 300100
2026-02-20 06:57:45 (26768): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 19 05:33 pilot3.tar.gz
2026-02-20 06:57:45 (26768): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 19 05:37 runpilot2-wrapper.sh
2026-02-20 06:57:45 (26768): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 19 05:41 queuedata.json
2026-02-20 06:57:45 (26768): Guest Log: -rw-r--r--. 1 atlas atlas    597963 Feb 19 17:40 input.tar.gz
2026-02-20 06:57:45 (26768): Guest Log: -rw-r--r--. 1 atlas atlas      6149 Feb 19 17:40 init_data.xml
2026-02-20 06:57:45 (26768): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Feb 19 17:40 start_atlas.sh
2026-02-20 06:57:45 (26768): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 19 17:40 EVNT.48508760._000812.pool.root.1 -> /data/./ATLAS.root_0
2026-02-20 06:57:45 (26768): Guest Log: -rw-r--r--. 1 atlas atlas      2553 Feb 19 17:40 pandaJob.out
2026-02-20 06:57:45 (26768): Guest Log: -rw-------. 1 atlas atlas   1001575 Feb 19 17:42 agis_schedconf.cvmfs.json
2026-02-20 06:57:45 (26768): Guest Log: -rw-------. 1 atlas atlas       426 Feb 19 17:42 workernode_map.json
2026-02-20 06:57:45 (26768): Guest Log: drwx------. 5 atlas atlas      4096 Feb 19 17:42 pilot3
2026-02-20 06:57:45 (26768): Guest Log: -rw-------. 1 atlas atlas 289905969 Feb 20 05:55 HITS.48508763._042352.pool.root.1
2026-02-20 06:57:45 (26768): Guest Log: -rw-------. 1 atlas atlas        95 Feb 20 05:56 pilot_heartbeat.json
2026-02-20 06:57:45 (26768): Guest Log: -rw-------. 1 atlas atlas         0 Feb 20 05:56 memory_monitor_summary.json
2026-02-20 06:57:45 (26768): Guest Log: -rw-------. 1 atlas atlas   1513015 Feb 20 05:56 agis_ddmendpoints.agis.ALL.json
2026-02-20 06:57:45 (26768): Guest Log: -rw-------. 1 atlas atlas    804351 Feb 20 05:56 log.48508763._042352.job.log.tgz.1
2026-02-20 06:57:45 (26768): Guest Log: -rw-------. 1 atlas atlas      6369 Feb 20 05:56 heartbeat.json
2026-02-20 06:57:45 (26768): Guest Log: -rw-------. 1 atlas atlas      4873 Feb 20 05:57 pilotlog.txt
2026-02-20 06:57:45 (26768): Guest Log: -rw-------. 1 atlas atlas   5962811 Feb 20 05:57 log.48508763._042352.job.log.1
2026-02-20 06:57:45 (26768): Guest Log: -rw-------. 1 atlas atlas       357 Feb 20 05:57 output.list
2026-02-20 06:57:45 (26768): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 20 05:57 runtime_log
2026-02-20 06:57:45 (26768): Guest Log: -rw-------. 1 atlas atlas   6789120 Feb 20 05:57 result.tar.gz
2026-02-20 06:57:45 (26768): Guest Log: -rw-r--r--. 1 atlas atlas      8758 Feb 20 05:57 runtime_log.err
2026-02-20 06:57:45 (26768): Guest Log: -rw-------. 1 atlas atlas       662 Feb 20 05:57 nn3MDm3tBD9n9Rq4apOajLDm4fhM0noT9bVooX4SDmjBwKDmJgb1Fo.diag
2026-02-20 06:57:45 (26768): Guest Log: Looking for outputfile HITS.48508763._042352.pool.root.1
2026-02-20 06:57:45 (26768): Guest Log: HITS file was successfully produced
2026-02-20 06:57:45 (26768): Guest Log: -rw-------. 1 atlas atlas 289905969 Feb 20 05:55 /home/atlas/RunAtlas/HITS.48508763._042352.pool.root.1
2026-02-20 06:57:46 (26768): Guest Log: Successfully finished the ATLAS job!
2026-02-20 06:57:46 (26768): Guest Log: Copying the results back to the shared directory!
2026-02-20 06:57:46 (26768): Guest Log:  *** Contents of shared directory: ***
2026-02-20 06:57:46 (26768): Guest Log: total 669960
2026-02-20 06:57:46 (26768): Guest Log: -rw-r--r--. 1 root root 678620573 Feb 19 17:39 ATLAS.root_0
2026-02-20 06:57:46 (26768): Guest Log: -rw-r--r--. 1 root root      6149 Feb 19 17:39 init_data.xml
2026-02-20 06:57:46 (26768): Guest Log: -rw-r--r--. 1 root root    597963 Feb 19 17:39 input.tar.gz
2026-02-20 06:57:46 (26768): Guest Log: -rw-r--r--. 1 root root   6789120 Feb 20 05:57 result.tar.gz
2026-02-20 06:57:46 (26768): Guest Log: -rw-r--r--. 1 root root     15845 Feb 19 17:39 start_atlas.sh
2026-02-20 06:57:46 (26768): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-20 06:57:46 (26768): VM Completion File Detected.
2026-02-20 06:57:46 (26768): Powering off VM.
2026-02-20 06:57:46 (26768): Successfully stopped VM.
2026-02-20 06:57:46 (26768): Deregistering VM. (boinc_056f43d76926b319, slot#0)
2026-02-20 06:57:46 (26768): Removing network bandwidth throttle group from VM.
2026-02-20 06:57:47 (26768): Removing VM from VirtualBox.
2026-02-20 06:57:52 (26768): called boinc_finish(0)

</stderr_txt>
]]>

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