Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
09:13:40 (276857): wrapper (7.7.26015): starting
09:13:40 (276857): wrapper: running run_atlas (--nthreads 12)
[2026-02-20 09:13:40] Arguments: --nthreads 12
[2026-02-20 09:13:40] Threads: 12
[2026-02-20 09:13:40] Checking for CVMFS
[2026-02-20 09:13:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-20 09:13:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-20 09:13:41] Running cvmfs_config stat atlas.cern.ch
[2026-02-20 09:13:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-20 09:13:41] 2.12.7.0 4050148 8205 71328 156449 0 188 3086433 4194305 1834 130560 0 8483258 99.994 271092 2931 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-02-20 09:13:41] CVMFS is ok
[2026-02-20 09:13:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-20 09:13:41] Checking for apptainer binary...
[2026-02-20 09:13:41] apptainer is not installed, using version from CVMFS
[2026-02-20 09:13:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-20 09:13:41] Trebeth
[2026-02-20 09:13:41] apptainer works
[2026-02-20 09:13:41] Set ATHENA_PROC_NUMBER=12
[2026-02-20 09:13:41] Set ATHENA_CORE_NUMBER=12
[2026-02-20 09:13:41] Starting ATLAS job with PandaID=7021101020
[2026-02-20 09:13:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-20 10:48:12]  *** The last 200 lines of the pilot log: ***
[2026-02-20 10:48:12]  is_tar=False
[2026-02-20 10:48:12]  lfn=log.48508763._039685.job.log.tgz.1
[2026-02-20 10:48:12]  mtime=0
[2026-02-20 10:48:12]  protocol_id=None
[2026-02-20 10:48:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-20 10:48:12]  replicas=None
[2026-02-20 10:48:12]  scope=mc23_13p6TeV
[2026-02-20 10:48:12]  status=None
[2026-02-20 10:48:12]  status_code=0
[2026-02-20 10:48:12]  storage_token=
[2026-02-20 10:48:12]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-7021101020/log.48508763._039685.job.log.tgz.1
[2026-02-20 10:48:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/82/log.48508763._039685.job.log.tgz.1
[2026-02-20 10:48:12]  workdir=None
[2026-02-20 10:48:12] ]
[2026-02-20 10:48:12] 2026-02-20 15:47:37,036 | INFO     | transferring file log.48508763._039685.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-7021101020/log.48508763._039685.job.log.tgz.1 to /var/lib/boinc
[2026-02-20 10:48:12] 2026-02-20 15:47:37,037 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-7021101020/log.48508763._039685.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.485087
[2026-02-20 10:48:12] 2026-02-20 15:47:37,052 | INFO     | adding to output.list: log.48508763._039685.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/82/log.48508763._039685.job.log.tg
[2026-02-20 10:48:12] 2026-02-20 15:47:37,053 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-20 10:48:12] 2026-02-20 15:47:37,053 | INFO     | summary of transferred files:
[2026-02-20 10:48:12] 2026-02-20 15:47:37,053 | INFO     |  -- lfn=log.48508763._039685.job.log.tgz.1, status_code=0, status=transferred
[2026-02-20 10:48:12] 2026-02-20 15:47:37,054 | INFO     | stage-out finished correctly
[2026-02-20 10:48:12] 2026-02-20 15:47:37,139 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-20 10:48:12] 2026-02-20 15:47:37,978 | INFO     | PID=281244 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-20 10:48:12] 2026-02-20 15:47:37,978 | INFO     | .. there are 3 such processes running
[2026-02-20 10:48:12] 2026-02-20 15:47:38,978 | INFO     | time since job start (5623s) is within the limit (349056.0s)
[2026-02-20 10:48:12] 2026-02-20 15:47:39,772 | WARNING  | process 286040 can no longer be monitored (due to stat problems) - aborting
[2026-02-20 10:48:12] 2026-02-20 15:47:39,772 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7021101020/memory_monitor_summary.json (trf name=prmon)
[2026-02-20 10:48:12] 2026-02-20 15:47:39,886 | INFO     | job 7021101020 has state=finished
[2026-02-20 10:48:12] 2026-02-20 15:47:39,887 | INFO     | preparing for final server update for job 7021101020 in state='finished'
[2026-02-20 10:48:12] 2026-02-20 15:47:39,887 | INFO     | reading metadata from: /var/lib/boinc-client/slots/1/PanDA_Pilot-7021101020/jobReport.json
[2026-02-20 10:48:12] 2026-02-20 15:47:39,889 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-02-20 10:48:12] 2026-02-20 15:47:39,890 | INFO     | this job has now completed (state=finished)
[2026-02-20 10:48:12] 2026-02-20 15:47:39,890 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-20 10:48:12] 2026-02-20 15:47:39,890 | INFO     | log transfer has been attempted: DONE
[2026-02-20 10:48:12] 2026-02-20 15:47:39,890 | INFO     | job 7021101020 has finished - writing final server update
[2026-02-20 10:48:12] 2026-02-20 15:47:39,891 | INFO     | total number of processed events: 400 (read)
[2026-02-20 10:48:12] 2026-02-20 15:47:39,921 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7021101020/memory_monitor_summary.json (trf name=prmon)
[2026-02-20 10:48:12] 2026-02-20 15:47:39,921 | INFO     | extracted standard info from prmon json
[2026-02-20 10:48:12] 2026-02-20 15:47:39,922 | INFO     | extracted standard memory fields from prmon json
[2026-02-20 10:48:12] 2026-02-20 15:47:39,922 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-20 10:48:12] 2026-02-20 15:47:39,922 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-20 10:48:12] 2026-02-20 15:47:39,922 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-20 10:48:12] 2026-02-20 15:47:39,925 | INFO     | fitting pss+swap vs Time
[2026-02-20 10:48:12] 2026-02-20 15:47:39,925 | INFO     | sum of square deviations: 190403570.0
[2026-02-20 10:48:12] 2026-02-20 15:47:39,925 | INFO     | sum of deviations: 212629835.00000095
[2026-02-20 10:48:12] 2026-02-20 15:47:39,926 | INFO     | mean x: 1771599722.0
[2026-02-20 10:48:12] 2026-02-20 15:47:39,926 | INFO     | mean y: 2831512.0705882353
[2026-02-20 10:48:12] 2026-02-20 15:47:39,926 | INFO     | intersect: -1975571290.8543122
[2026-02-20 10:48:12] 2026-02-20 15:47:39,926 | INFO     | chi2: 0.24793226371367796
[2026-02-20 10:48:12] 2026-02-20 15:47:39,926 | INFO     | current memory leak: 1.12 B/s (using 85 data points, chi2=0.25)
[2026-02-20 10:48:12] 2026-02-20 15:47:39,927 | INFO     | could have reported an average CPU frequency of 3009 MHz (7 samples)
[2026-02-20 10:48:12] 2026-02-20 15:47:39,927 | INFO     | ..............................
[2026-02-20 10:48:12] 2026-02-20 15:47:39,927 | INFO     | . Timing measurements:
[2026-02-20 10:48:12] 2026-02-20 15:47:39,927 | INFO     | . get job = 0 s
[2026-02-20 10:48:12] 2026-02-20 15:47:39,928 | INFO     | . initial setup = 6 s
[2026-02-20 10:48:12] 2026-02-20 15:47:39,928 | INFO     | . payload setup = 4 s
[2026-02-20 10:48:12] 2026-02-20 15:47:39,928 | INFO     | . stage-in = 0 s
[2026-02-20 10:48:12] 2026-02-20 15:47:39,928 | INFO     | . payload execution = 5600 s
[2026-02-20 10:48:12] 2026-02-20 15:47:39,928 | INFO     | . stage-out = 0 s
[2026-02-20 10:48:12] 2026-02-20 15:47:39,928 | INFO     | . log creation = 0 s
[2026-02-20 10:48:12] 2026-02-20 15:47:39,928 | INFO     | ..............................
[2026-02-20 10:48:12] 2026-02-20 15:47:40,013 | INFO     | 
[2026-02-20 10:48:12] 2026-02-20 15:47:40,013 | INFO     | job summary report
[2026-02-20 10:48:12] 2026-02-20 15:47:40,013 | INFO     | --------------------------------------------------
[2026-02-20 10:48:12] 2026-02-20 15:47:40,013 | INFO     | PanDA job id: 7021101020
[2026-02-20 10:48:12] 2026-02-20 15:47:40,013 | INFO     | task id: 48508763
[2026-02-20 10:48:12] 2026-02-20 15:47:40,014 | INFO     | errors: (none)
[2026-02-20 10:48:12] 2026-02-20 15:47:40,014 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-20 10:48:12] 2026-02-20 15:47:40,014 | INFO     | pilot state: finished 
[2026-02-20 10:48:12] 2026-02-20 15:47:40,014 | INFO     | transexitcode: 0
[2026-02-20 10:48:12] 2026-02-20 15:47:40,015 | INFO     | exeerrorcode: 0
[2026-02-20 10:48:12] 2026-02-20 15:47:40,015 | INFO     | exeerrordiag: 
[2026-02-20 10:48:12] 2026-02-20 15:47:40,015 | INFO     | exitcode: 0
[2026-02-20 10:48:12] 2026-02-20 15:47:40,015 | INFO     | exitmsg: OK
[2026-02-20 10:48:12] 2026-02-20 15:47:40,015 | INFO     | cpuconsumptiontime: 60769 s
[2026-02-20 10:48:12] 2026-02-20 15:47:40,015 | INFO     | nevents: 400
[2026-02-20 10:48:12] 2026-02-20 15:47:40,015 | INFO     | neventsw: 0
[2026-02-20 10:48:12] 2026-02-20 15:47:40,016 | INFO     | pid: 286040
[2026-02-20 10:48:12] 2026-02-20 15:47:40,016 | INFO     | pgrp: 286040
[2026-02-20 10:48:12] 2026-02-20 15:47:40,016 | INFO     | corecount: 12
[2026-02-20 10:48:12] 2026-02-20 15:47:40,016 | INFO     | event service: False
[2026-02-20 10:48:12] 2026-02-20 15:47:40,016 | INFO     | sizes: {0: 2282005, 1: 2282295, 11: 2282295, 5609: 2308976, 5610: 2317988, 5611: 2318044, 5613: 2318366}
[2026-02-20 10:48:12] 2026-02-20 15:47:40,016 | INFO     | --------------------------------------------------
[2026-02-20 10:48:12] 2026-02-20 15:47:40,016 | INFO     | 
[2026-02-20 10:48:12] 2026-02-20 15:47:40,017 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-02-20 10:48:12] 2026-02-20 15:47:40,035 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-20 10:48:12] 2026-02-20 15:47:40,035 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-20 10:48:12] 2026-02-20 15:47:40,036 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-20 10:48:12] 2026-02-20 15:47:40,036 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-20 10:48:12] 2026-02-20 15:47:40,036 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-20 10:48:12] 2026-02-20 15:47:40,036 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-20 10:48:12] 2026-02-20 15:47:40,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-20 10:48:12] 2026-02-20 15:47:40,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-20 10:48:12] 2026-02-20 15:47:40,037 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-20 10:48:12] 2026-02-20 15:47:40,037 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-20 10:48:12] 2026-02-20 15:47:40,037 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-20 10:48:12] 2026-02-20 15:47:40,037 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-20 10:48:12] 2026-02-20 15:47:40,037 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-20 10:48:12] 2026-02-20 15:47:40,037 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-20 10:48:12] 2026-02-20 15:47:40,038 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-20 10:48:12] 2026-02-20 15:47:40,038 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-20 10:48:12] 2026-02-20 15:47:40,038 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-20 10:48:12] 2026-02-20 15:47:40,038 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-20 10:48:12] 2026-02-20 15:47:40,038 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-20 10:48:12] 2026-02-20 15:47:40,038 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-20 10:48:12] 2026-02-20 15:47:40,039 | INFO     | job 7021101020 has completed (purged errors)
[2026-02-20 10:48:12] 2026-02-20 15:47:40,039 | INFO     | overall cleanup function is called
[2026-02-20 10:48:12] 2026-02-20 15:47:40,071 | INFO     | number of running child processes to parent process 286040: 1
[2026-02-20 10:48:12] 2026-02-20 15:47:40,071 | INFO     | maximum number of monitored processes: 6
[2026-02-20 10:48:12] 2026-02-20 15:47:40,071 | INFO     | aborting job monitoring since job object (job id=7021101020) has expired
[2026-02-20 10:48:12] 2026-02-20 15:47:41,048 | INFO     | --- collectZombieJob: --- 10, [286040]
[2026-02-20 10:48:12] 2026-02-20 15:47:41,048 | INFO     | zombie collector waiting for pid 286040
[2026-02-20 10:48:12] 2026-02-20 15:47:41,049 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-20 10:48:12] 2026-02-20 15:47:41,049 | INFO     | collected zombie processes
[2026-02-20 10:48:12] 2026-02-20 15:47:41,049 | INFO     | will attempt to kill all subprocesses of pid=286040
[2026-02-20 10:48:12] 2026-02-20 15:47:41,298 | INFO     | process IDs to be killed: [286040] (in reverse order)
[2026-02-20 10:48:12] 2026-02-20 15:47:41,364 | WARNING  | found no corresponding commands to process id(s)
[2026-02-20 10:48:12] 2026-02-20 15:47:41,364 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-20 10:48:12] 2026-02-20 15:47:41,372 | INFO     | did not find any defunct processes belonging to 286040
[2026-02-20 10:48:12] 2026-02-20 15:47:41,377 | INFO     | did not find any defunct processes belonging to 286040
[2026-02-20 10:48:12] 2026-02-20 15:47:41,378 | INFO     | ready for new job
[2026-02-20 10:48:12] 2026-02-20 15:47:41,378 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-20 10:48:12] 2026-02-20 15:47:41,380 | INFO     | **************************************
[2026-02-20 10:48:12] 2026-02-20 15:47:41,380 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-20 10:48:12] 2026-02-20 15:47:41,380 | INFO     | **************************************
[2026-02-20 10:48:12] 2026-02-20 15:47:41,380 | INFO     | 
[2026-02-20 10:48:12] 2026-02-20 15:47:41,401 | INFO     | architecture information:
[2026-02-20 10:48:12] 2026-02-20 15:47:41,402 | INFO     | executing command: cat /etc/os-release
[2026-02-20 10:48:12] 2026-02-20 15:47:41,413 | INFO     | cat /etc/os-release:
[2026-02-20 10:48:12] NAME="CentOS Linux"
[2026-02-20 10:48:12] VERSION="7 (Core)"
[2026-02-20 10:48:12] ID="centos"
[2026-02-20 10:48:12] ID_LIKE="rhel fedora"
[2026-02-20 10:48:12] VERSION_ID="7"
[2026-02-20 10:48:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-20 10:48:12] ANSI_COLOR="0;31"
[2026-02-20 10:48:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-20 10:48:12] HOME_URL="https://www.centos.org/"
[2026-02-20 10:48:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-20 10:48:12] 
[2026-02-20 10:48:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-20 10:48:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-20 10:48:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-20 10:48:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-20 10:48:12] 
[2026-02-20 10:48:12] 2026-02-20 15:47:41,414 | INFO     | **************************************
[2026-02-20 10:48:12] 2026-02-20 15:47:41,915 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-02-20 10:48:12] 2026-02-20 15:47:41,930 | INFO     | sufficient remaining disk space (380733751296 B)
[2026-02-20 10:48:12] 2026-02-20 15:47:41,930 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-20 10:48:12] 2026-02-20 15:47:41,930 | INFO     | current server update state: UPDATING_FINAL
[2026-02-20 10:48:12] 2026-02-20 15:47:41,930 | INFO     | update_server=False
[2026-02-20 10:48:12] 2026-02-20 15:47:41,930 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-20 10:48:12] 2026-02-20 15:47:41,931 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-20 10:48:12] 2026-02-20 15:47:41,931 | INFO     | aborting loop
[2026-02-20 10:48:12] 2026-02-20 15:47:41,931 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-20 10:48:12] 2026-02-20 15:47:42,632 | INFO     | all job control threads have been joined
[2026-02-20 10:48:12] 2026-02-20 15:47:42,646 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-20 10:48:12] 2026-02-20 15:47:42,922 | INFO     | all data control threads have been joined
[2026-02-20 10:48:12] 2026-02-20 15:47:42,934 | INFO     | [job] job monitor thread has finished
[2026-02-20 10:48:12] 2026-02-20 15:47:42,935 | INFO     | [job] queue monitor thread has finished
[2026-02-20 10:48:12] 2026-02-20 15:47:42,936 | INFO     | [job] retrieve thread has finished
[2026-02-20 10:48:12] 2026-02-20 15:47:42,942 | INFO     | all payload control threads have been joined
[2026-02-20 10:48:12] 2026-02-20 15:47:43,233 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-20 10:48:12] 2026-02-20 15:47:43,598 | INFO     | [job] validate thread has finished
[2026-02-20 10:48:12] 2026-02-20 15:47:43,638 | INFO     | [job] control thread has finished
[2026-02-20 10:48:12] 2026-02-20 15:47:43,802 | INFO     | [job] create_data_payload thread has finished
[2026-02-20 10:48:12] 2026-02-20 15:47:43,894 | INFO     | [payload] execute_payloads thread has finished
[2026-02-20 10:48:12] 2026-02-20 15:47:43,926 | INFO     | [data] control thread has finished
[2026-02-20 10:48:12] 2026-02-20 15:47:43,946 | INFO     | [payload] control thread has finished
[2026-02-20 10:48:12] 2026-02-20 15:47:44,094 | INFO     | [payload] validate_pre thread has finished
[2026-02-20 10:48:12] 2026-02-20 15:47:44,210 | INFO     | [payload] failed_post thread has finished
[2026-02-20 10:48:12] 2026-02-20 15:47:44,358 | INFO     | [data] copytool_in thread has finished
[2026-02-20 10:48:12] 2026-02-20 15:47:44,466 | INFO     | [payload] validate_post thread has finished
[2026-02-20 10:48:12] 2026-02-20 15:47:44,650 | INFO     | [data] copytool_out thread has finished
[2026-02-20 10:48:12] 2026-02-20 15:47:47,238 | INFO     | [data] queue_monitor thread has finished
[2026-02-20 10:48:12] 2026-02-20 15:47:52,042 | INFO     | job.realtimelogging is not enabled
[2026-02-20 10:48:12] 2026-02-20 15:47:53,046 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-20 10:48:12] 2026-02-20 15:48:04,306 | INFO     | [monitor] cgroup control has ended
[2026-02-20 10:48:12] 2026-02-20 15:48:04,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140554110236480)>', '<ExcThread(monitor, started 140553542956800)>']
[2026-02-20 10:48:12] 2026-02-20 15:48:09,938 | INFO     | all workflow threads have been joined
[2026-02-20 10:48:12] 2026-02-20 15:48:09,938 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-20 10:48:12] 2026-02-20 15:48:09,939 | INFO     | traces error code: 0
[2026-02-20 10:48:12] 2026-02-20 15:48:09,939 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-20 10:48:12] 2026-02-20 15:48:12,254 | INFO     | PID=281244 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-20 10:48:12] 2026-02-20 15:48:12,255 | INFO     | .. there are 3 such processes running
[2026-02-20 10:48:12] 2026-02-20 15:48:12,256 | INFO     | found 0 job(s) in 20 queues
[2026-02-20 10:48:12] 2026-02-20 15:48:12,256 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-20 10:48:12] 2026-02-20 15:48:12,256 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-20 10:48:12] 2026-02-20 15:48:12,256 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-20 10:48:12] 2026-02-20 15:48:12,256 | INFO     | [monitor] control thread has ended
[2026-02-20 10:48:12] 2026-02-20 15:48:12,353 [wrapper] ==== pilot stdout END ====
[2026-02-20 10:48:12] 2026-02-20 15:48:12,355 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-20 10:48:12] 2026-02-20 15:48:12,357 [wrapper] pilotpid: 281244
[2026-02-20 10:48:12] 2026-02-20 15:48:12,359 [wrapper] Pilot exit status: 0
[2026-02-20 10:48:12] 2026-02-20 15:48:12,366 [wrapper] pandaids: 7021101020
[2026-02-20 10:48:12] 2026-02-20 15:48:12,410 [wrapper] cleanup supervisor_pilot  336282 281245
[2026-02-20 10:48:12] 2026-02-20 15:48:12,412 [wrapper] Test setup, not cleaning
[2026-02-20 10:48:12] 2026-02-20 15:48:12,414 [wrapper] apfmon messages muted
[2026-02-20 10:48:12] 2026-02-20 15:48:12,416 [wrapper] ==== wrapper stdout END ====
[2026-02-20 10:48:12] 2026-02-20 15:48:12,418 [wrapper] ==== wrapper stderr END ====
[2026-02-20 10:48:12]  *** Error codes and diagnostics ***
[2026-02-20 10:48:12]     "exeErrorCode": 0,
[2026-02-20 10:48:12]     "exeErrorDiag": "",
[2026-02-20 10:48:12]     "pilotErrorCode": 0,
[2026-02-20 10:48:12]     "pilotErrorDiag": "",
[2026-02-20 10:48:12]  *** Listing of results directory ***
[2026-02-20 10:48:12] total 942360
[2026-02-20 10:48:12] -rw-r--r-- 1 boinc boinc    584627 Feb 18 21:42 pilot3.tar.gz
[2026-02-20 10:48:12] -rwx------ 1 boinc boinc     36322 Feb 18 21:43 runpilot2-wrapper.sh
[2026-02-20 10:48:12] -rw-r--r-- 1 boinc boinc      5111 Feb 18 21:44 queuedata.json
[2026-02-20 10:48:12] -rw-r--r-- 1 boinc boinc       100 Feb 20 09:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-20 10:48:12] -rwxr-xr-x 1 boinc boinc      7986 Feb 20 09:13 run_atlas
[2026-02-20 10:48:12] -rw-r--r-- 1 boinc boinc       105 Feb 20 09:13 job.xml
[2026-02-20 10:48:12] -rw-r--r-- 2 boinc boinc     15845 Feb 20 09:13 start_atlas.sh
[2026-02-20 10:48:12] drwxrwx--x 2 boinc boinc      4096 Feb 20 09:13 shared
[2026-02-20 10:48:12] -rw-r--r-- 2 boinc boinc    597955 Feb 20 09:13 input.tar.gz
[2026-02-20 10:48:12] -rw-r--r-- 1 boinc boinc      7579 Feb 20 09:13 init_data.xml
[2026-02-20 10:48:12] -rw-r--r-- 2 boinc boinc 674107063 Feb 20 09:13 EVNT.48508760._000759.pool.root.1
[2026-02-20 10:48:12] -rw-r--r-- 1 boinc boinc         0 Feb 20 09:13 boinc_lockfile
[2026-02-20 10:48:12] -rw-r--r-- 1 boinc boinc      2551 Feb 20 09:13 pandaJob.out
[2026-02-20 10:48:12] -rw------- 1 boinc boinc        50 Feb 20 09:13 setup.sh.local
[2026-02-20 10:48:12] -rw------- 1 boinc boinc   1001572 Feb 20 09:13 agis_schedconf.cvmfs.json
[2026-02-20 10:48:12] -rw------- 1 boinc boinc   1513015 Feb 20 09:13 agis_ddmendpoints.agis.ALL.json
[2026-02-20 10:48:12] -rw------- 1 boinc boinc       430 Feb 20 09:13 workernode_map.json
[2026-02-20 10:48:12] drwx------ 5 boinc boinc      4096 Feb 20 09:13 pilot3
[2026-02-20 10:48:12] -rw-r--r-- 1 boinc boinc       530 Feb 20 10:46 boinc_task_state.xml
[2026-02-20 10:48:12] -rw------- 1 boinc boinc 284456637 Feb 20 10:46 HITS.48508763._039685.pool.root.1
[2026-02-20 10:48:12] -rw------- 1 boinc boinc      1029 Feb 20 10:47 memory_monitor_summary.json
[2026-02-20 10:48:12] -rw------- 1 boinc boinc    407926 Feb 20 10:47 log.48508763._039685.job.log.tgz.1
[2026-02-20 10:48:12] -rw------- 1 boinc boinc      6337 Feb 20 10:47 heartbeat.json
[2026-02-20 10:48:12] -rw-r--r-- 1 boinc boinc      8192 Feb 20 10:48 boinc_mmap_file
[2026-02-20 10:48:12] -rw-r--r-- 1 boinc boinc        27 Feb 20 10:48 wrapper_checkpoint.txt
[2026-02-20 10:48:12] -rw------- 1 boinc boinc       821 Feb 20 10:48 pilotlog.txt
[2026-02-20 10:48:12] -rw------- 1 boinc boinc        95 Feb 20 10:48 pilot_heartbeat.json
[2026-02-20 10:48:12] -rw------- 1 boinc boinc    829488 Feb 20 10:48 log.48508763._039685.job.log.1
[2026-02-20 10:48:12] -rw------- 1 boinc boinc       357 Feb 20 10:48 output.list
[2026-02-20 10:48:12] -rw-r--r-- 1 boinc boinc       620 Feb 20 10:48 runtime_log
[2026-02-20 10:48:12] -rw------- 1 boinc boinc   1259520 Feb 20 10:48 result.tar.gz
[2026-02-20 10:48:12] -rw-r--r-- 1 boinc boinc      9403 Feb 20 10:48 runtime_log.err
[2026-02-20 10:48:12] -rw------- 1 boinc boinc       650 Feb 20 10:48 GrUNDmnB9C9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmy8wKDm7dRDon.diag
[2026-02-20 10:48:12] -rw-r--r-- 1 boinc boinc     21404 Feb 20 10:48 stderr.txt
[2026-02-20 10:48:12] HITS file was successfully produced:
[2026-02-20 10:48:12] -rw------- 1 boinc boinc 284456637 Feb 20 10:46 shared/HITS.pool.root.1
[2026-02-20 10:48:12]  *** Contents of shared directory: ***
[2026-02-20 10:48:12] total 937940
[2026-02-20 10:48:12] -rw-r--r-- 2 boinc boinc     15845 Feb 20 09:13 start_atlas.sh
[2026-02-20 10:48:12] -rw-r--r-- 2 boinc boinc    597955 Feb 20 09:13 input.tar.gz
[2026-02-20 10:48:12] -rw-r--r-- 2 boinc boinc 674107063 Feb 20 09:13 ATLAS.root_0
[2026-02-20 10:48:12] -rw------- 1 boinc boinc 284456637 Feb 20 10:46 HITS.pool.root.1
[2026-02-20 10:48:12] -rw------- 1 boinc boinc   1259520 Feb 20 10:48 result.tar.gz
10:48:13 (276857): run_atlas exited; CPU time 60875.358177
10:48:13 (276857): called boinc_finish(0)

</stderr_txt>
]]>

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