Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:57:34 (1268302): wrapper (7.7.26015): starting
09:57:34 (1268302): wrapper: running run_atlas (--nthreads 3)
[2026-02-20 09:57:34] Arguments: --nthreads 3
[2026-02-20 09:57:34] Threads: 3
[2026-02-20 09:57:34] Checking for CVMFS
[2026-02-20 09:57:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-20 09:57:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-20 09:57:34] Running cvmfs_config stat atlas.cern.ch
[2026-02-20 09:57:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-20 09:57:34] 2.9.2.0 1196108 587 61412 156441 1 50 28960499 36864001 0 130560 0 202385 99.984 20427 10203 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-20 09:57:34] CVMFS is ok
[2026-02-20 09:57:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-20 09:57:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-20 09:57:34] Further information can be found at the LHC@home message board.
[2026-02-20 09:57:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-20 09:57:34] Checking for apptainer binary...
[2026-02-20 09:57:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-20 09:57:34] Running /usr/bin/apptainer --version
[2026-02-20 09:57:34] apptainer version 1.4.1-1.1
[2026-02-20 09:57:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-20 09:57:34] magicA161a
[2026-02-20 09:57:34] apptainer works
[2026-02-20 09:57:34] Set ATHENA_PROC_NUMBER=3
[2026-02-20 09:57:34] Set ATHENA_CORE_NUMBER=3
[2026-02-20 09:57:34] Starting ATLAS job with PandaID=7021120614
[2026-02-20 09:57:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-20 11:57:00]  *** The last 200 lines of the pilot log: ***
[2026-02-20 11:57:00] 2026-02-20 10:56:28,124 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-20 11:57:00] 2026-02-20 10:56:28,124 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-20 11:57:00] 2026-02-20 10:56:28,124 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-20 11:57:00] 2026-02-20 10:56:28,124 | INFO     | job 7021120614 has completed (purged errors)
[2026-02-20 11:57:00] 2026-02-20 10:56:28,124 | INFO     | overall cleanup function is called
[2026-02-20 11:57:00] 2026-02-20 10:56:29,131 | INFO     | --- collectZombieJob: --- 10, [1276771]
[2026-02-20 11:57:00] 2026-02-20 10:56:29,131 | INFO     | zombie collector waiting for pid 1276771
[2026-02-20 11:57:00] 2026-02-20 10:56:29,131 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-20 11:57:00] 2026-02-20 10:56:29,131 | INFO     | collected zombie processes
[2026-02-20 11:57:00] 2026-02-20 10:56:29,131 | INFO     | will attempt to kill all subprocesses of pid=1276771
[2026-02-20 11:57:00] 2026-02-20 10:56:29,172 | INFO     | process IDs to be killed: [1276771] (in reverse order)
[2026-02-20 11:57:00] 2026-02-20 10:56:29,195 | WARNING  | found no corresponding commands to process id(s)
[2026-02-20 11:57:00] 2026-02-20 10:56:29,195 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-20 11:57:00] 2026-02-20 10:56:29,196 | INFO     | did not find any defunct processes belonging to 1276771
[2026-02-20 11:57:00] 2026-02-20 10:56:29,197 | INFO     | did not find any defunct processes belonging to 1276771
[2026-02-20 11:57:00] 2026-02-20 10:56:29,197 | INFO     | ready for new job
[2026-02-20 11:57:00] 2026-02-20 10:56:29,197 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-20 11:57:00] 2026-02-20 10:56:29,198 | INFO     | **************************************
[2026-02-20 11:57:00] 2026-02-20 10:56:29,198 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-20 11:57:00] 2026-02-20 10:56:29,198 | INFO     | **************************************
[2026-02-20 11:57:00] 2026-02-20 10:56:29,198 | INFO     | 
[2026-02-20 11:57:00] 2026-02-20 10:56:29,198 | INFO     | architecture information:
[2026-02-20 11:57:00] 2026-02-20 10:56:29,198 | INFO     | executing command: cat /etc/os-release
[2026-02-20 11:57:00] 2026-02-20 10:56:29,207 | INFO     | cat /etc/os-release:
[2026-02-20 11:57:00] NAME="CentOS Linux"
[2026-02-20 11:57:00] VERSION="7 (Core)"
[2026-02-20 11:57:00] ID="centos"
[2026-02-20 11:57:00] ID_LIKE="rhel fedora"
[2026-02-20 11:57:00] VERSION_ID="7"
[2026-02-20 11:57:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-20 11:57:00] ANSI_COLOR="0;31"
[2026-02-20 11:57:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-20 11:57:00] HOME_URL="https://www.centos.org/"
[2026-02-20 11:57:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-20 11:57:00] 
[2026-02-20 11:57:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-20 11:57:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-20 11:57:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-20 11:57:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-20 11:57:00] 
[2026-02-20 11:57:00] 2026-02-20 10:56:29,207 | INFO     | **************************************
[2026-02-20 11:57:00] 2026-02-20 10:56:29,710 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-20 11:57:00] 2026-02-20 10:56:29,722 | INFO     | sufficient remaining disk space (372002258944 B)
[2026-02-20 11:57:00] 2026-02-20 10:56:29,722 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-20 11:57:00] 2026-02-20 10:56:29,722 | INFO     | current server update state: UPDATING_FINAL
[2026-02-20 11:57:00] 2026-02-20 10:56:29,722 | INFO     | update_server=False
[2026-02-20 11:57:00] 2026-02-20 10:56:29,723 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-20 11:57:00] 2026-02-20 10:56:29,723 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-20 11:57:00] 2026-02-20 10:56:29,723 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-20 11:57:00] 2026-02-20 10:56:29,914 | INFO     | all data control threads have been joined
[2026-02-20 11:57:00] 2026-02-20 10:56:30,619 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-20 11:57:00] 2026-02-20 10:56:30,619 | INFO     | aborting loop
[2026-02-20 11:57:00] 2026-02-20 10:56:30,720 | INFO     | all job control threads have been joined
[2026-02-20 11:57:00] 2026-02-20 10:56:30,728 | INFO     | [job] queue monitor thread has finished
[2026-02-20 11:57:00] 2026-02-20 10:56:30,728 | INFO     | [job] retrieve thread has finished
[2026-02-20 11:57:00] 2026-02-20 10:56:30,822 | INFO     | [payload] validate_post thread has finished
[2026-02-20 11:57:00] 2026-02-20 10:56:30,920 | INFO     | [data] control thread has finished
[2026-02-20 11:57:00] 2026-02-20 10:56:31,052 | INFO     | all payload control threads have been joined
[2026-02-20 11:57:00] 2026-02-20 10:56:31,202 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-20 11:57:00] 2026-02-20 10:56:31,592 | INFO     | [payload] execute_payloads thread has finished
[2026-02-20 11:57:00] 2026-02-20 10:56:31,625 | INFO     | [job] job monitor thread has finished
[2026-02-20 11:57:00] 2026-02-20 10:56:31,726 | INFO     | [job] control thread has finished
[2026-02-20 11:57:00] 2026-02-20 10:56:31,729 | INFO     | [data] copytool_out thread has finished
[2026-02-20 11:57:00] 2026-02-20 10:56:31,883 | INFO     | [job] validate thread has finished
[2026-02-20 11:57:00] 2026-02-20 10:56:31,908 | INFO     | [payload] failed_post thread has finished
[2026-02-20 11:57:00] 2026-02-20 10:56:31,959 | INFO     | [job] create_data_payload thread has finished
[2026-02-20 11:57:00] 2026-02-20 10:56:32,058 | INFO     | [payload] control thread has finished
[2026-02-20 11:57:00] 2026-02-20 10:56:32,070 | INFO     | [payload] validate_pre thread has finished
[2026-02-20 11:57:00] 2026-02-20 10:56:32,149 | INFO     | [data] copytool_in thread has finished
[2026-02-20 11:57:00] 2026-02-20 10:56:35,209 | INFO     | [data] queue_monitor thread has finished
[2026-02-20 11:57:00] 2026-02-20 10:56:40,484 | INFO     | job.realtimelogging is not enabled
[2026-02-20 11:57:00] 2026-02-20 10:56:41,490 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-20 11:57:00] 2026-02-20 10:56:52,798 | INFO     | [monitor] cgroup control has ended
[2026-02-20 11:57:00] 2026-02-20 10:56:53,731 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140291551934272)>', '<ExcThread(monitor, started 140290920793856)>']
[2026-02-20 11:57:00] 2026-02-20 10:56:58,743 | INFO     | all workflow threads have been joined
[2026-02-20 11:57:00] 2026-02-20 10:56:58,743 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-20 11:57:00] 2026-02-20 10:56:58,743 | INFO     | traces error code: 0
[2026-02-20 11:57:00] 2026-02-20 10:56:58,744 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-20 11:57:00] 2026-02-20 10:57:00,002 | INFO     | PID=1272350 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-20 11:57:00] 2026-02-20 10:57:00,002 | INFO     | found 0 job(s) in 20 queues
[2026-02-20 11:57:00] 2026-02-20 10:57:00,002 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-20 11:57:00] 2026-02-20 10:57:00,002 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-20 11:57:00] 2026-02-20 10:57:00,002 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-20 11:57:00] 2026-02-20 10:57:00,002 | INFO     | [monitor] control thread has ended
[2026-02-20 11:57:00] 2026-02-20 10:57:00,049 [wrapper] ==== pilot stdout END ====
[2026-02-20 11:57:00] 2026-02-20 10:57:00,052 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-20 11:57:00] 2026-02-20 10:57:00,054 [wrapper] pilotpid: 1272350
[2026-02-20 11:57:00] 2026-02-20 10:57:00,056 [wrapper] Pilot exit status: 0
[2026-02-20 11:57:00] 2026-02-20 10:57:00,063 [wrapper] pandaids: 7021120614
[2026-02-20 11:57:00] 2026-02-20 10:57:00,078 [wrapper] cleanup supervisor_pilot 1282162 1272351
[2026-02-20 11:57:00] 2026-02-20 10:57:00,081 [wrapper] Test setup, not cleaning
[2026-02-20 11:57:00] 2026-02-20 10:57:00,083 [wrapper] apfmon messages muted
[2026-02-20 11:57:00] 2026-02-20 10:57:00,085 [wrapper] ==== wrapper stdout END ====
[2026-02-20 11:57:00] 2026-02-20 10:57:00,087 [wrapper] ==== wrapper stderr END ====
[2026-02-20 11:57:00]  *** Error codes and diagnostics ***
[2026-02-20 11:57:00]     "exeErrorCode": 0,
[2026-02-20 11:57:00]     "exeErrorDiag": "",
[2026-02-20 11:57:00]     "pilotErrorCode": 0,
[2026-02-20 11:57:00]     "pilotErrorDiag": "",
[2026-02-20 11:57:00]  *** Listing of results directory ***
[2026-02-20 11:57:00] total 949220
[2026-02-20 11:57:00] -rw-r--r-- 1 boinc boinc      5111 Feb 19 14:45 queuedata.json
[2026-02-20 11:57:00] -rw-r--r-- 1 boinc boinc    584627 Feb 19 14:45 pilot3.tar.gz
[2026-02-20 11:57:00] -rwx------ 1 boinc boinc     36322 Feb 19 14:46 runpilot2-wrapper.sh
[2026-02-20 11:57:00] -rw-r--r-- 1 boinc boinc       100 Feb 20 09:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-20 11:57:00] -rwxr-xr-x 1 boinc boinc      7986 Feb 20 09:57 run_atlas
[2026-02-20 11:57:00] -rw-r--r-- 1 boinc boinc       105 Feb 20 09:57 job.xml
[2026-02-20 11:57:00] -rw-r--r-- 2 boinc boinc 681186820 Feb 20 09:57 EVNT.48508760._000904.pool.root.1
[2026-02-20 11:57:00] -rw-r--r-- 2 boinc boinc    597960 Feb 20 09:57 input.tar.gz
[2026-02-20 11:57:00] -rw-r--r-- 2 boinc boinc     15845 Feb 20 09:57 start_atlas.sh
[2026-02-20 11:57:00] drwxrwx--x 2 boinc boinc      4096 Feb 20 09:57 shared
[2026-02-20 11:57:00] -rw-r--r-- 1 boinc boinc         0 Feb 20 09:57 boinc_setup_complete
[2026-02-20 11:57:00] -rw-r--r-- 1 boinc boinc      6448 Feb 20 09:57 init_data.xml
[2026-02-20 11:57:00] -rw-r--r-- 1 boinc boinc         0 Feb 20 09:57 boinc_lockfile
[2026-02-20 11:57:00] -rw-r--r-- 1 boinc boinc      2552 Feb 20 09:57 pandaJob.out
[2026-02-20 11:57:00] -rw------- 1 boinc boinc   1001567 Feb 20 09:57 agis_schedconf.cvmfs.json
[2026-02-20 11:57:00] -rw------- 1 boinc boinc   1513015 Feb 20 09:57 agis_ddmendpoints.agis.ALL.json
[2026-02-20 11:57:00] -rw------- 1 boinc boinc       426 Feb 20 09:57 workernode_map.json
[2026-02-20 11:57:00] drwx------ 5 boinc boinc      4096 Feb 20 09:57 pilot3
[2026-02-20 11:57:00] -rw------- 1 boinc boinc 284272613 Feb 20 11:56 HITS.48508763._046947.pool.root.1
[2026-02-20 11:57:00] -rw-r--r-- 1 boinc boinc       530 Feb 20 11:56 boinc_task_state.xml
[2026-02-20 11:57:00] -rw------- 1 boinc boinc        95 Feb 20 11:56 pilot_heartbeat.json
[2026-02-20 11:57:00] -rw------- 1 boinc boinc      1016 Feb 20 11:56 memory_monitor_summary.json
[2026-02-20 11:57:00] -rw------- 1 boinc boinc    290794 Feb 20 11:56 log.48508763._046947.job.log.tgz.1
[2026-02-20 11:57:00] -rw------- 1 boinc boinc      6307 Feb 20 11:56 heartbeat.json
[2026-02-20 11:57:00] -rw-r--r-- 1 boinc boinc        27 Feb 20 11:56 wrapper_checkpoint.txt
[2026-02-20 11:57:00] -rw-r--r-- 1 boinc boinc      8192 Feb 20 11:56 boinc_mmap_file
[2026-02-20 11:57:00] -rw------- 1 boinc boinc       747 Feb 20 11:57 pilotlog.txt
[2026-02-20 11:57:00] -rw------- 1 boinc boinc   1023592 Feb 20 11:57 log.48508763._046947.job.log.1
[2026-02-20 11:57:00] -rw------- 1 boinc boinc       357 Feb 20 11:57 output.list
[2026-02-20 11:57:00] -rw-r--r-- 1 boinc boinc       620 Feb 20 11:57 runtime_log
[2026-02-20 11:57:00] -rw------- 1 boinc boinc   1331200 Feb 20 11:57 result.tar.gz
[2026-02-20 11:57:00] -rw-r--r-- 1 boinc boinc      8916 Feb 20 11:57 runtime_log.err
[2026-02-20 11:57:00] -rw------- 1 boinc boinc       661 Feb 20 11:57 2AONDmLXJD9n9Rq4apOajLDm4fhM0noT9bVooX4SDmScwKDmTRzyLo.diag
[2026-02-20 11:57:00] -rw-r--r-- 1 boinc boinc     11203 Feb 20 11:57 stderr.txt
[2026-02-20 11:57:00] HITS file was successfully produced:
[2026-02-20 11:57:00] -rw------- 1 boinc boinc 284272613 Feb 20 11:56 shared/HITS.pool.root.1
[2026-02-20 11:57:00]  *** Contents of shared directory: ***
[2026-02-20 11:57:00] total 944744
[2026-02-20 11:57:00] -rw-r--r-- 2 boinc boinc 681186820 Feb 20 09:57 ATLAS.root_0
[2026-02-20 11:57:00] -rw-r--r-- 2 boinc boinc    597960 Feb 20 09:57 input.tar.gz
[2026-02-20 11:57:00] -rw-r--r-- 2 boinc boinc     15845 Feb 20 09:57 start_atlas.sh
[2026-02-20 11:57:00] -rw------- 1 boinc boinc 284272613 Feb 20 11:56 HITS.pool.root.1
[2026-02-20 11:57:00] -rw------- 1 boinc boinc   1331200 Feb 20 11:57 result.tar.gz
11:57:02 (1268302): run_atlas exited; CPU time 20657.968859
11:57:02 (1268302): called boinc_finish(0)

</stderr_txt>
]]>

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