Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:25:51 (352281): wrapper (7.7.26015): starting
00:25:51 (352281): wrapper: running run_atlas (--nthreads 4)
[2026-02-20 00:25:51] Arguments: --nthreads 4
[2026-02-20 00:25:51] Threads: 4
[2026-02-20 00:25:51] Checking for CVMFS
[2026-02-20 00:25:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-20 00:25:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-20 00:25:51] Running cvmfs_config stat atlas.cern.ch
[2026-02-20 00:25:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-20 00:25:51] 2.9.2.0 4299 2057 85484 156428 3 50 31980200 36864000 0 130560 0 880487 99.984 79405 14607 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-20 00:25:51] CVMFS is ok
[2026-02-20 00:25:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-20 00:25:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-20 00:25:51] Further information can be found at the LHC@home message board.
[2026-02-20 00:25:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-20 00:25:51] Checking for apptainer binary...
[2026-02-20 00:25:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-20 00:25:51] Running /usr/bin/apptainer --version
[2026-02-20 00:25:51] apptainer version 1.4.1-1.1
[2026-02-20 00:25:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-20 00:25:51] thA373a
[2026-02-20 00:25:51] apptainer works
[2026-02-20 00:25:51] Set ATHENA_PROC_NUMBER=4
[2026-02-20 00:25:51] Set ATHENA_CORE_NUMBER=4
[2026-02-20 00:25:51] Starting ATLAS job with PandaID=7021103713
[2026-02-20 00:25:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-20 02:11:37]  *** The last 200 lines of the pilot log: ***
[2026-02-20 02:11:37] 2026-02-20 01:11:07,163 | INFO     | will attempt to kill all subprocesses of pid=360930
[2026-02-20 02:11:37] 2026-02-20 01:11:07,212 | INFO     | process IDs to be killed: [360930] (in reverse order)
[2026-02-20 02:11:37] 2026-02-20 01:11:07,244 | WARNING  | found no corresponding commands to process id(s)
[2026-02-20 02:11:37] 2026-02-20 01:11:07,245 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-20 02:11:37] 2026-02-20 01:11:07,246 | INFO     | did not find any defunct processes belonging to 360930
[2026-02-20 02:11:37] 2026-02-20 01:11:07,248 | INFO     | did not find any defunct processes belonging to 360930
[2026-02-20 02:11:37] 2026-02-20 01:11:07,248 | INFO     | ready for new job
[2026-02-20 02:11:37] 2026-02-20 01:11:07,248 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-20 02:11:37] 2026-02-20 01:11:07,249 | INFO     | **************************************
[2026-02-20 02:11:37] 2026-02-20 01:11:07,249 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-20 02:11:37] 2026-02-20 01:11:07,249 | INFO     | **************************************
[2026-02-20 02:11:37] 2026-02-20 01:11:07,249 | INFO     | 
[2026-02-20 02:11:37] 2026-02-20 01:11:07,249 | INFO     | architecture information:
[2026-02-20 02:11:37] 2026-02-20 01:11:07,250 | INFO     | executing command: cat /etc/os-release
[2026-02-20 02:11:37] 2026-02-20 01:11:07,263 | INFO     | cat /etc/os-release:
[2026-02-20 02:11:37] NAME="CentOS Linux"
[2026-02-20 02:11:37] VERSION="7 (Core)"
[2026-02-20 02:11:37] ID="centos"
[2026-02-20 02:11:37] ID_LIKE="rhel fedora"
[2026-02-20 02:11:37] VERSION_ID="7"
[2026-02-20 02:11:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-20 02:11:37] ANSI_COLOR="0;31"
[2026-02-20 02:11:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-20 02:11:37] HOME_URL="https://www.centos.org/"
[2026-02-20 02:11:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-20 02:11:37] 
[2026-02-20 02:11:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-20 02:11:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-20 02:11:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-20 02:11:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-20 02:11:37] 
[2026-02-20 02:11:37] 2026-02-20 01:11:07,263 | INFO     | **************************************
[2026-02-20 02:11:37] 2026-02-20 01:11:07,766 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-20 02:11:37] 2026-02-20 01:11:07,783 | INFO     | sufficient remaining disk space (323070459904 B)
[2026-02-20 02:11:37] 2026-02-20 01:11:07,783 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-20 02:11:37] 2026-02-20 01:11:07,783 | INFO     | current server update state: UPDATING_FINAL
[2026-02-20 02:11:37] 2026-02-20 01:11:07,783 | INFO     | update_server=False
[2026-02-20 02:11:37] 2026-02-20 01:11:07,783 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-20 02:11:37] 2026-02-20 01:11:07,783 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-20 02:11:37] 2026-02-20 01:11:07,783 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-20 02:11:37] 2026-02-20 01:11:07,784 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-20 02:11:37] 2026-02-20 01:11:07,784 | INFO     | aborting loop
[2026-02-20 02:11:37] 2026-02-20 01:11:07,999 | INFO     | all data control threads have been joined
[2026-02-20 02:11:37] 2026-02-20 01:11:08,502 | INFO     | all payload control threads have been joined
[2026-02-20 02:11:37] 2026-02-20 01:11:08,789 | INFO     | [job] retrieve thread has finished
[2026-02-20 02:11:37] 2026-02-20 01:11:08,789 | INFO     | [job] queue monitor thread has finished
[2026-02-20 02:11:37] 2026-02-20 01:11:08,789 | INFO     | [job] job monitor thread has finished
[2026-02-20 02:11:37] 2026-02-20 01:11:09,000 | INFO     | [payload] execute_payloads thread has finished
[2026-02-20 02:11:37] 2026-02-20 01:11:09,005 | INFO     | [data] control thread has finished
[2026-02-20 02:11:37] 2026-02-20 01:11:09,109 | INFO     | [payload] failed_post thread has finished
[2026-02-20 02:11:37] 2026-02-20 01:11:09,236 | INFO     | all job control threads have been joined
[2026-02-20 02:11:37] 2026-02-20 01:11:09,471 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-20 02:11:37] 2026-02-20 01:11:09,508 | INFO     | [payload] control thread has finished
[2026-02-20 02:11:37] 2026-02-20 01:11:09,588 | INFO     | [job] validate thread has finished
[2026-02-20 02:11:37] 2026-02-20 01:11:09,655 | INFO     | [payload] validate_post thread has finished
[2026-02-20 02:11:37] 2026-02-20 01:11:09,719 | INFO     | [job] create_data_payload thread has finished
[2026-02-20 02:11:37] 2026-02-20 01:11:09,789 | INFO     | [data] copytool_out thread has finished
[2026-02-20 02:11:37] 2026-02-20 01:11:09,855 | INFO     | [payload] validate_pre thread has finished
[2026-02-20 02:11:37] 2026-02-20 01:11:09,857 | INFO     | [data] copytool_in thread has finished
[2026-02-20 02:11:37] 2026-02-20 01:11:10,036 | INFO     | [monitor] cgroup control has ended
[2026-02-20 02:11:37] 2026-02-20 01:11:10,242 | INFO     | [job] control thread has finished
[2026-02-20 02:11:37] 2026-02-20 01:11:11,191 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-20 02:11:37] 2026-02-20 01:11:15,198 | INFO     | [data] queue_monitor thread has finished
[2026-02-20 02:11:37] 2026-02-20 01:11:17,045 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140499265808192)>', '<ExcThread(monitor, started 140498639513344)>']
[2026-02-20 02:11:37] 2026-02-20 01:11:22,071 | INFO     | all workflow threads have been joined
[2026-02-20 02:11:37] 2026-02-20 01:11:22,071 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-20 02:11:37] 2026-02-20 01:11:22,071 | INFO     | traces error code: 0
[2026-02-20 02:11:37] 2026-02-20 01:11:22,072 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-20 02:11:37] 2026-02-20 01:11:37,375 | INFO     | PID=356435 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-20 02:11:37] 2026-02-20 01:11:37,375 | INFO     | found 0 job(s) in 20 queues
[2026-02-20 02:11:37] 2026-02-20 01:11:37,375 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-20 02:11:37] 2026-02-20 01:11:37,375 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-20 02:11:37] 2026-02-20 01:11:37,375 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-20 02:11:37] 2026-02-20 01:11:37,375 | INFO     | [monitor] control thread has ended
[2026-02-20 02:11:37] 2026-02-20 01:11:37,449 [wrapper] ==== pilot stdout END ====
[2026-02-20 02:11:37] 2026-02-20 01:11:37,453 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-20 02:11:37] 2026-02-20 01:11:37,457 [wrapper] pilotpid: 356435
[2026-02-20 02:11:37] 2026-02-20 01:11:37,460 [wrapper] Pilot exit status: 0
[2026-02-20 02:11:37] 2026-02-20 01:11:37,471 [wrapper] pandaids: 7021103713
[2026-02-20 02:11:37] 2026-02-20 01:11:37,493 [wrapper] cleanup supervisor_pilot  370445 356436
[2026-02-20 02:11:37] 2026-02-20 01:11:37,496 [wrapper] Test setup, not cleaning
[2026-02-20 02:11:37] 2026-02-20 01:11:37,500 [wrapper] apfmon messages muted
[2026-02-20 02:11:37] 2026-02-20 01:11:37,503 [wrapper] ==== wrapper stdout END ====
[2026-02-20 02:11:37] 2026-02-20 01:11:37,506 [wrapper] ==== wrapper stderr END ====
[2026-02-20 02:11:37]  *** Error codes and diagnostics ***
[2026-02-20 02:11:37]     "exeErrorCode": 0,
[2026-02-20 02:11:37]     "exeErrorDiag": "",
[2026-02-20 02:11:37]     "pilotErrorCode": 0,
[2026-02-20 02:11:37]     "pilotErrorDiag": "",
[2026-02-20 02:11:37]  *** Listing of results directory ***
[2026-02-20 02:11:37] total 944868
[2026-02-20 02:11:37] -rw-r--r-- 1 boinc boinc    584627 Feb 19 06:33 pilot3.tar.gz
[2026-02-20 02:11:37] -rw-r--r-- 1 boinc boinc      5111 Feb 19 06:34 queuedata.json
[2026-02-20 02:11:37] -rwx------ 1 boinc boinc     36322 Feb 19 06:34 runpilot2-wrapper.sh
[2026-02-20 02:11:37] -rw-r--r-- 1 boinc boinc       100 Feb 20 00:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-20 02:11:37] -rwxr-xr-x 1 boinc boinc      7986 Feb 20 00:25 run_atlas
[2026-02-20 02:11:37] -rw-r--r-- 1 boinc boinc       105 Feb 20 00:25 job.xml
[2026-02-20 02:11:37] -rw-r--r-- 2 boinc boinc 679076279 Feb 20 00:25 EVNT.48508760._000791.pool.root.1
[2026-02-20 02:11:37] -rw-r--r-- 2 boinc boinc    597963 Feb 20 00:25 input.tar.gz
[2026-02-20 02:11:37] -rw-r--r-- 2 boinc boinc     15845 Feb 20 00:25 start_atlas.sh
[2026-02-20 02:11:37] drwxrwx--x 2 boinc boinc      4096 Feb 20 00:25 shared
[2026-02-20 02:11:37] -rw-r--r-- 1 boinc boinc         0 Feb 20 00:25 boinc_setup_complete
[2026-02-20 02:11:37] -rw-r--r-- 1 boinc boinc      6377 Feb 20 00:25 init_data.xml
[2026-02-20 02:11:37] -rw-r--r-- 1 boinc boinc         0 Feb 20 00:25 boinc_lockfile
[2026-02-20 02:11:37] -rw-r--r-- 1 boinc boinc      2552 Feb 20 00:25 pandaJob.out
[2026-02-20 02:11:37] -rw------- 1 boinc boinc   1001559 Feb 20 00:25 agis_schedconf.cvmfs.json
[2026-02-20 02:11:37] -rw------- 1 boinc boinc   1513015 Feb 20 00:25 agis_ddmendpoints.agis.ALL.json
[2026-02-20 02:11:37] -rw------- 1 boinc boinc       422 Feb 20 00:26 workernode_map.json
[2026-02-20 02:11:37] drwx------ 5 boinc boinc      4096 Feb 20 00:26 pilot3
[2026-02-20 02:11:37] -rw------- 1 boinc boinc 282125038 Feb 20 02:10 HITS.48508763._041295.pool.root.1
[2026-02-20 02:11:37] -rw-r--r-- 1 boinc boinc       530 Feb 20 02:10 boinc_task_state.xml
[2026-02-20 02:11:37] -rw------- 1 boinc boinc      1022 Feb 20 02:11 memory_monitor_summary.json
[2026-02-20 02:11:37] -rw------- 1 boinc boinc    301316 Feb 20 02:11 log.48508763._041295.job.log.tgz.1
[2026-02-20 02:11:37] -rw------- 1 boinc boinc      6315 Feb 20 02:11 heartbeat.json
[2026-02-20 02:11:37] -rw-r--r-- 1 boinc boinc      8192 Feb 20 02:11 boinc_mmap_file
[2026-02-20 02:11:37] -rw-r--r-- 1 boinc boinc        27 Feb 20 02:11 wrapper_checkpoint.txt
[2026-02-20 02:11:37] -rw------- 1 boinc boinc       746 Feb 20 02:11 pilotlog.txt
[2026-02-20 02:11:37] -rw------- 1 boinc boinc        95 Feb 20 02:11 pilot_heartbeat.json
[2026-02-20 02:11:37] -rw------- 1 boinc boinc    909549 Feb 20 02:11 log.48508763._041295.job.log.1
[2026-02-20 02:11:37] -rw------- 1 boinc boinc       357 Feb 20 02:11 output.list
[2026-02-20 02:11:37] -rw-r--r-- 1 boinc boinc       620 Feb 20 02:11 runtime_log
[2026-02-20 02:11:37] -rw------- 1 boinc boinc   1228800 Feb 20 02:11 result.tar.gz
[2026-02-20 02:11:37] -rw-r--r-- 1 boinc boinc      8901 Feb 20 02:11 runtime_log.err
[2026-02-20 02:11:37] -rw------- 1 boinc boinc       658 Feb 20 02:11 4DYNDmUrBD9n9Rq4apOajLDm4fhM0noT9bVooX4SDmRxvKDmhF6Cwn.diag
[2026-02-20 02:11:37] -rw-r--r-- 1 boinc boinc     10181 Feb 20 02:11 stderr.txt
[2026-02-20 02:11:37] HITS file was successfully produced:
[2026-02-20 02:11:37] -rw------- 1 boinc boinc 282125038 Feb 20 02:10 shared/HITS.pool.root.1
[2026-02-20 02:11:37]  *** Contents of shared directory: ***
[2026-02-20 02:11:37] total 940488
[2026-02-20 02:11:37] -rw-r--r-- 2 boinc boinc 679076279 Feb 20 00:25 ATLAS.root_0
[2026-02-20 02:11:37] -rw-r--r-- 2 boinc boinc    597963 Feb 20 00:25 input.tar.gz
[2026-02-20 02:11:37] -rw-r--r-- 2 boinc boinc     15845 Feb 20 00:25 start_atlas.sh
[2026-02-20 02:11:37] -rw------- 1 boinc boinc 282125038 Feb 20 02:10 HITS.pool.root.1
[2026-02-20 02:11:37] -rw------- 1 boinc boinc   1228800 Feb 20 02:11 result.tar.gz
02:11:38 (352281): run_atlas exited; CPU time 24018.719169
02:11:38 (352281): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN