Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:18:19 (2488324): wrapper (7.7.26015): starting
11:18:19 (2488324): wrapper: running run_atlas (--nthreads 10)
[2026-02-19 11:18:19] Arguments: --nthreads 10
[2026-02-19 11:18:19] Threads: 10
[2026-02-19 11:18:19] Checking for CVMFS
[2026-02-19 11:18:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-19 11:18:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-19 11:18:20] Running cvmfs_config stat atlas.cern.ch
[2026-02-19 11:18:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-19 11:18:20] 2.13.3.0 10978 152634 543944 156416 1 78 39948825 40960000 23176 16776704 0 370736827 99.539 483836664 39372 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-19 11:18:20] CVMFS is ok
[2026-02-19 11:18:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-19 11:18:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-19 11:18:20] Further information can be found at the LHC@home message board.
[2026-02-19 11:18:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-19 11:18:20] Checking for apptainer binary...
[2026-02-19 11:18:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-19 11:18:20] Running /usr/bin/apptainer --version
[2026-02-19 11:18:20] apptainer version 1.4.5-2.el9
[2026-02-19 11:18:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-19 11:18:21] c6-8-12-1.aglt2.org
[2026-02-19 11:18:21] apptainer works
[2026-02-19 11:18:21] Set ATHENA_PROC_NUMBER=10
[2026-02-19 11:18:21] Set ATHENA_CORE_NUMBER=10
[2026-02-19 11:18:21] Starting ATLAS job with PandaID=7021103327
[2026-02-19 11:18:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
12:00:06 (2488324): BOINC client no longer exists - exiting
12:00:06 (2488324): timer handler: client dead, exiting
12:10:19 (2689251): wrapper (7.7.26015): starting
12:10:19 (2689251): wrapper: running run_atlas (--nthreads 10)
[2026-02-19 12:10:19] Arguments: --nthreads 10
[2026-02-19 12:10:19] Threads: 10
[2026-02-19 12:10:19] This job has been restarted, cleaning up previous attempt
[2026-02-19 12:10:19] Checking for CVMFS
[2026-02-19 12:10:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-19 12:10:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-19 12:10:19] Running cvmfs_config stat atlas.cern.ch
[2026-02-19 12:10:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-19 12:10:20] 2.13.3.0 10978 152686 552464 156417 1 493 23084220 40960001 24140 16776704 0 370984521 99.538 484318504 39362 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-19 12:10:20] CVMFS is ok
[2026-02-19 12:10:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-19 12:10:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-19 12:10:20] Further information can be found at the LHC@home message board.
[2026-02-19 12:10:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-19 12:10:20] Checking for apptainer binary...
[2026-02-19 12:10:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-19 12:10:20] Running /usr/bin/apptainer --version
[2026-02-19 12:10:21] apptainer version 1.4.5-2.el9
[2026-02-19 12:10:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-19 12:10:21] c6-8-12-1.aglt2.org
[2026-02-19 12:10:21] apptainer works
[2026-02-19 12:10:21] Set ATHENA_PROC_NUMBER=10
[2026-02-19 12:10:21] Set ATHENA_CORE_NUMBER=10
[2026-02-19 12:10:21] Starting ATLAS job with PandaID=7021103327
[2026-02-19 12:10:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-20 04:00:15]  *** The last 200 lines of the pilot log: ***
[2026-02-20 04:00:15] 2026-02-20 06:13:09,405 | INFO     | maximum number of monitored processes: 6
[2026-02-20 04:00:15] 2026-02-20 06:13:10,662 | INFO     | job 7021103327 has state=finished
[2026-02-20 04:00:15] 2026-02-20 06:13:10,662 | INFO     | preparing for final server update for job 7021103327 in state='finished'
[2026-02-20 04:00:15] 2026-02-20 06:13:10,662 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7021103327/jobReport.json
[2026-02-20 04:00:15] 2026-02-20 06:13:10,664 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-02-20 04:00:15] 2026-02-20 06:13:10,665 | INFO     | this job has now completed (state=finished)
[2026-02-20 04:00:15] 2026-02-20 06:13:10,665 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-20 04:00:15] 2026-02-20 06:13:10,665 | INFO     | log transfer has been attempted: DONE
[2026-02-20 04:00:15] 2026-02-20 06:13:10,665 | INFO     | job 7021103327 has finished - writing final server update
[2026-02-20 04:00:15] 2026-02-20 06:13:10,665 | INFO     | total number of processed events: 400 (read)
[2026-02-20 04:00:15] 2026-02-20 06:13:10,771 | INFO     | time since job start (46921s) is within the limit (349056.0s)
[2026-02-20 04:00:15] 2026-02-20 06:13:10,788 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7021103327/memory_monitor_summary.json (trf name=prmon)
[2026-02-20 04:00:15] 2026-02-20 06:13:10,793 | INFO     | extracted standard info from prmon json
[2026-02-20 04:00:15] 2026-02-20 06:13:10,793 | INFO     | extracted standard memory fields from prmon json
[2026-02-20 04:00:15] 2026-02-20 06:13:10,793 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-20 04:00:15] 2026-02-20 06:13:10,794 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-20 04:00:15] 2026-02-20 06:13:10,794 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-20 04:00:15] 2026-02-20 06:13:10,913 | INFO     | fitting pss+swap vs Time
[2026-02-20 04:00:15] 2026-02-20 06:13:10,914 | INFO     | sum of square deviations: 140461373058.49854
[2026-02-20 04:00:15] 2026-02-20 06:13:11,045 | INFO     | sum of deviations: 285835033399.35376
[2026-02-20 04:00:15] 2026-02-20 06:13:11,045 | INFO     | mean x: 1771544541.5846355
[2026-02-20 04:00:15] 2026-02-20 06:13:11,045 | INFO     | mean y: 2669278.9791666665
[2026-02-20 04:00:15] 2026-02-20 06:13:11,045 | INFO     | intersect: -3602375169.7989135
[2026-02-20 04:00:15] 2026-02-20 06:13:11,046 | INFO     | chi2: 3.4249482615265188
[2026-02-20 04:00:15] 2026-02-20 06:13:11,063 | INFO     | sum of square deviations: 137735797593.46255
[2026-02-20 04:00:15] 2026-02-20 06:13:11,088 | INFO     | sum of deviations: 337427358353.77844
[2026-02-20 04:00:15] 2026-02-20 06:13:11,088 | INFO     | mean x: 1771544389.08519
[2026-02-20 04:00:15] 2026-02-20 06:13:11,088 | INFO     | mean y: 2672149.8034076015
[2026-02-20 04:00:15] 2026-02-20 06:13:11,088 | INFO     | intersect: -4337285608.889284
[2026-02-20 04:00:15] 2026-02-20 06:13:11,089 | INFO     | chi2: 2.6786689708609437
[2026-02-20 04:00:15] 2026-02-20 06:13:11,089 | INFO     | current chi2=2.6786689708609437 (change=21.789505524762415 %)
[2026-02-20 04:00:15] 2026-02-20 06:13:11,089 | INFO     | right removable region: 762
[2026-02-20 04:00:15] 2026-02-20 06:13:11,094 | INFO     | sum of square deviations: 137735757943.46255
[2026-02-20 04:00:15] 2026-02-20 06:13:11,113 | INFO     | sum of deviations: 82315910444.86234
[2026-02-20 04:00:15] 2026-02-20 06:13:11,113 | INFO     | mean x: 1771544694.08519
[2026-02-20 04:00:15] 2026-02-20 06:13:11,113 | INFO     | mean y: 2680650.1559633026
[2026-02-20 04:00:15] 2026-02-20 06:13:11,113 | INFO     | intersect: -1056059045.074421
[2026-02-20 04:00:15] 2026-02-20 06:13:11,114 | INFO     | chi2: 0.9818672941551626
[2026-02-20 04:00:15] 2026-02-20 06:13:11,114 | INFO     | current chi2=0.9818672941551626 (change=71.33190871275997 %)
[2026-02-20 04:00:15] 2026-02-20 06:13:11,115 | INFO     | sum of square deviations: 135045631865.9264
[2026-02-20 04:00:15] 2026-02-20 06:13:11,138 | INFO     | sum of deviations: 24974680737.27704
[2026-02-20 04:00:15] 2026-02-20 06:13:11,138 | INFO     | mean x: 1771544846.585752
[2026-02-20 04:00:15] 2026-02-20 06:13:11,138 | INFO     | mean y: 2683898.303430079
[2026-02-20 04:00:15] 2026-02-20 06:13:11,138 | INFO     | intersect: -324936968.39126533
[2026-02-20 04:00:15] 2026-02-20 06:13:11,139 | INFO     | chi2: 0.8118309543576099
[2026-02-20 04:00:15] 2026-02-20 06:13:11,139 | INFO     | current chi2=0.8118309543576099 (change=17.317649830047422 %)
[2026-02-20 04:00:15] 2026-02-20 06:13:11,139 | INFO     | left removable region: 20
[2026-02-20 04:00:15] 2026-02-20 06:13:11,140 | INFO     | sum of square deviations: 126673236072.4853
[2026-02-20 04:00:15] 2026-02-20 06:13:11,162 | INFO     | sum of deviations: 58251845404.19409
[2026-02-20 04:00:15] 2026-02-20 06:13:11,163 | INFO     | mean x: 1771544968.5822103
[2026-02-20 04:00:15] 2026-02-20 06:13:11,163 | INFO     | mean y: 2688011.332884097
[2026-02-20 04:00:15] 2026-02-20 06:13:11,163 | INFO     | intersect: -811973134.4309916
[2026-02-20 04:00:15] 2026-02-20 06:13:11,164 | INFO     | chi2: 0.017274127427890737
[2026-02-20 04:00:15] 2026-02-20 06:13:11,164 | INFO     | current memory leak: 0.46 B/s (using 742 data points, chi2=0.02)
[2026-02-20 04:00:15] 2026-02-20 06:13:11,169 | INFO     | could have reported an average CPU frequency of 2885 MHz (29 samples)
[2026-02-20 04:00:15] 2026-02-20 06:13:11,169 | INFO     | ..............................
[2026-02-20 04:00:15] 2026-02-20 06:13:11,169 | INFO     | . Timing measurements:
[2026-02-20 04:00:15] 2026-02-20 06:13:11,169 | INFO     | . get job = 0 s
[2026-02-20 04:00:15] 2026-02-20 06:13:11,169 | INFO     | . initial setup = 2 s
[2026-02-20 04:00:15] 2026-02-20 06:13:11,169 | INFO     | . payload setup = 30 s
[2026-02-20 04:00:15] 2026-02-20 06:13:11,169 | INFO     | . stage-in = 0 s
[2026-02-20 04:00:15] 2026-02-20 06:13:11,169 | INFO     | . payload execution = 46864 s
[2026-02-20 04:00:15] 2026-02-20 06:13:11,170 | INFO     | . stage-out = 4 s
[2026-02-20 04:00:15] 2026-02-20 06:13:11,170 | INFO     | . log creation = 0 s
[2026-02-20 04:00:15] 2026-02-20 06:13:11,170 | INFO     | ..............................
[2026-02-20 04:00:15] 2026-02-20 06:13:11,338 | INFO     | 
[2026-02-20 04:00:15] 2026-02-20 06:13:11,340 | INFO     | job summary report
[2026-02-20 04:00:15] 2026-02-20 06:13:11,340 | INFO     | --------------------------------------------------
[2026-02-20 04:00:15] 2026-02-20 06:13:11,340 | INFO     | PanDA job id: 7021103327
[2026-02-20 04:00:15] 2026-02-20 06:13:11,340 | INFO     | task id: 48508763
[2026-02-20 04:00:15] 2026-02-20 06:13:11,340 | INFO     | errors: (none)
[2026-02-20 04:00:15] 2026-02-20 06:13:11,341 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-20 04:00:15] 2026-02-20 06:13:11,341 | INFO     | pilot state: finished 
[2026-02-20 04:00:15] 2026-02-20 06:13:11,341 | INFO     | transexitcode: 0
[2026-02-20 04:00:15] 2026-02-20 06:13:11,341 | INFO     | exeerrorcode: 0
[2026-02-20 04:00:15] 2026-02-20 06:13:11,341 | INFO     | exeerrordiag: 
[2026-02-20 04:00:15] 2026-02-20 06:13:11,341 | INFO     | exitcode: 0
[2026-02-20 04:00:15] 2026-02-20 06:13:11,341 | INFO     | exitmsg: OK
[2026-02-20 04:00:15] 2026-02-20 06:13:11,341 | INFO     | cpuconsumptiontime: 62044 s
[2026-02-20 04:00:15] 2026-02-20 06:13:11,341 | INFO     | nevents: 400
[2026-02-20 04:00:15] 2026-02-20 06:13:11,341 | INFO     | neventsw: 0
[2026-02-20 04:00:15] 2026-02-20 06:13:11,341 | INFO     | pid: 2702451
[2026-02-20 04:00:15] 2026-02-20 06:13:11,341 | INFO     | pgrp: 2702451
[2026-02-20 04:00:15] 2026-02-20 06:13:11,341 | INFO     | corecount: 10
[2026-02-20 04:00:15] 2026-02-20 06:13:11,341 | INFO     | event service: False
[2026-02-20 04:00:15] 2026-02-20 06:13:11,341 | INFO     | sizes: {0: 2281773, 1: 2281857, 2: 2282318, 13: 2282318, 46899: 2328289, 46904: 2337287, 46905: 2337471, 46908: 2337665}
[2026-02-20 04:00:15] 2026-02-20 06:13:11,342 | INFO     | --------------------------------------------------
[2026-02-20 04:00:15] 2026-02-20 06:13:11,342 | INFO     | 
[2026-02-20 04:00:15] 2026-02-20 06:13:11,342 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-02-20 04:00:15] 2026-02-20 06:13:11,389 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-20 04:00:15] 2026-02-20 06:13:11,389 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-20 04:00:15] 2026-02-20 06:13:11,389 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-20 04:00:15] 2026-02-20 06:13:11,389 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-20 04:00:15] 2026-02-20 06:13:11,389 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-20 04:00:15] 2026-02-20 06:13:11,390 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-20 04:00:15] 2026-02-20 06:13:11,390 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-20 04:00:15] 2026-02-20 06:13:11,390 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-20 04:00:15] 2026-02-20 06:13:11,390 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-20 04:00:15] 2026-02-20 06:13:11,390 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-20 04:00:15] 2026-02-20 06:13:11,390 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-20 04:00:15] 2026-02-20 06:13:11,390 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-20 04:00:15] 2026-02-20 06:13:11,390 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-20 04:00:15] 2026-02-20 06:13:11,390 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-20 04:00:15] 2026-02-20 06:13:11,390 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-20 04:00:15] 2026-02-20 06:13:11,390 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-20 04:00:15] 2026-02-20 06:13:11,390 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-20 04:00:15] 2026-02-20 06:13:11,390 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-20 04:00:15] 2026-02-20 06:13:11,391 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-20 04:00:15] 2026-02-20 06:13:11,391 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-20 04:00:15] 2026-02-20 06:13:11,391 | INFO     | job 7021103327 has completed (purged errors)
[2026-02-20 04:00:15] 2026-02-20 06:13:11,391 | INFO     | overall cleanup function is called
[2026-02-20 04:00:15] 2026-02-20 06:13:12,413 | INFO     | --- collectZombieJob: --- 10, [2702451]
[2026-02-20 04:00:15] 2026-02-20 06:13:12,413 | INFO     | zombie collector waiting for pid 2702451
[2026-02-20 04:00:15] 2026-02-20 06:13:12,413 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-20 04:00:15] 2026-02-20 06:13:12,413 | INFO     | collected zombie processes
[2026-02-20 04:00:15] 2026-02-20 06:13:12,413 | INFO     | will attempt to kill all subprocesses of pid=2702451
[2026-02-20 04:00:15] 2026-02-20 06:13:13,906 | INFO     | process IDs to be killed: [2702451] (in reverse order)
[2026-02-20 04:00:15] 2026-02-20 06:13:14,121 | WARNING  | found no corresponding commands to process id(s)
[2026-02-20 04:00:15] 2026-02-20 06:13:14,121 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-20 04:00:15] 2026-02-20 06:13:14,199 | INFO     | did not find any defunct processes belonging to 2702451
[2026-02-20 04:00:15] 2026-02-20 06:13:14,272 | INFO     | did not find any defunct processes belonging to 2702451
[2026-02-20 04:00:15] 2026-02-20 06:13:14,272 | INFO     | ready for new job
[2026-02-20 04:00:15] 2026-02-20 06:13:14,272 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-20 04:00:15] 2026-02-20 06:13:14,294 | INFO     | **************************************
[2026-02-20 04:00:15] 2026-02-20 06:13:14,312 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-20 04:00:15] 2026-02-20 06:13:14,312 | INFO     | **************************************
[2026-02-20 04:00:15] 2026-02-20 06:13:14,312 | INFO     | 
[2026-02-20 04:00:15] 2026-02-20 06:13:14,332 | INFO     | architecture information:
[2026-02-20 04:00:15] 2026-02-20 06:13:14,336 | INFO     | executing command: cat /etc/os-release
[2026-02-20 04:00:15] 2026-02-20 06:13:14,435 | INFO     | cat /etc/os-release:
[2026-02-20 04:00:15] NAME="CentOS Linux"
[2026-02-20 04:00:15] VERSION="7 (Core)"
[2026-02-20 04:00:15] ID="centos"
[2026-02-20 04:00:15] ID_LIKE="rhel fedora"
[2026-02-20 04:00:15] VERSION_ID="7"
[2026-02-20 04:00:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-20 04:00:15] ANSI_COLOR="0;31"
[2026-02-20 04:00:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-20 04:00:15] HOME_URL="https://www.centos.org/"
[2026-02-20 04:00:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-20 04:00:15] 
[2026-02-20 04:00:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-20 04:00:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-20 04:00:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-20 04:00:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-20 04:00:15] 
[2026-02-20 04:00:15] 2026-02-20 06:13:14,435 | INFO     | **************************************
[2026-02-20 04:00:15] 2026-02-20 06:13:14,952 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-20 04:00:15] 2026-02-20 06:13:15,088 | INFO     | sufficient remaining disk space (51305775104 B)
[2026-02-20 04:00:15] 2026-02-20 06:13:15,088 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-20 04:00:15] 2026-02-20 06:13:15,089 | INFO     | current server update state: UPDATING_FINAL
[2026-02-20 04:00:15] 2026-02-20 06:13:15,089 | INFO     | update_server=False
[2026-02-20 04:00:15] 2026-02-20 06:13:15,089 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-20 04:00:15] 2026-02-20 06:13:15,090 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-20 04:00:15] 2026-02-20 06:13:15,100 | INFO     | all data control threads have been joined
[2026-02-20 04:00:15] 2026-02-20 06:13:15,100 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-20 04:00:15] 2026-02-20 06:13:15,301 | INFO     | all job control threads have been joined
[2026-02-20 04:00:15] 2026-02-20 06:13:15,440 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-20 04:00:15] 2026-02-20 06:13:15,440 | INFO     | aborting loop
[2026-02-20 04:00:15] 2026-02-20 06:13:15,608 | INFO     | all payload control threads have been joined
[2026-02-20 04:00:15] 2026-02-20 06:13:16,095 | INFO     | [job] retrieve thread has finished
[2026-02-20 04:00:15] 2026-02-20 06:13:16,106 | INFO     | [data] control thread has finished
[2026-02-20 04:00:15] 2026-02-20 06:13:16,198 | INFO     | [payload] validate_pre thread has finished
[2026-02-20 04:00:15] 2026-02-20 06:13:16,307 | INFO     | [job] control thread has finished
[2026-02-20 04:00:15] 2026-02-20 06:13:16,384 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-20 04:00:15] 2026-02-20 06:13:16,415 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-20 04:00:15] 2026-02-20 06:13:16,448 | INFO     | [job] job monitor thread has finished
[2026-02-20 04:00:15] 2026-02-20 06:13:16,490 | INFO     | [payload] execute_payloads thread has finished
[2026-02-20 04:00:15] 2026-02-20 06:13:16,616 | INFO     | [payload] control thread has finished
[2026-02-20 04:00:15] 2026-02-20 06:13:17,043 | INFO     | [job] validate thread has finished
[2026-02-20 04:00:15] 2026-02-20 06:13:17,049 | INFO     | [job] create_data_payload thread has finished
[2026-02-20 04:00:15] 2026-02-20 06:13:17,066 | INFO     | [payload] failed_post thread has finished
[2026-02-20 04:00:15] 2026-02-20 06:13:17,097 | INFO     | [data] copytool_out thread has finished
[2026-02-20 04:00:15] 2026-02-20 06:13:17,154 | INFO     | [data] copytool_in thread has finished
[2026-02-20 04:00:15] 2026-02-20 06:13:17,390 | INFO     | [job] queue monitor thread has finished
[2026-02-20 04:00:15] 2026-02-20 06:13:17,592 | INFO     | [payload] validate_post thread has finished
[2026-02-20 04:00:15] 2026-02-20 06:13:19,109 | INFO     | [data] queue_monitor thread has finished
[2026-02-20 04:00:15] 2026-02-20 06:13:33,184 | INFO     | [monitor] cgroup control has ended
[2026-02-20 04:00:15] 2026-02-20 06:13:34,687 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140203803199296)>', '<ExcThread(monitor, started 140203092076288)>']
[2026-02-20 04:00:15] 2026-02-20 06:13:39,713 | INFO     | all workflow threads have been joined
[2026-02-20 04:00:15] 2026-02-20 06:13:39,713 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-20 04:00:15] 2026-02-20 06:13:39,713 | INFO     | traces error code: 0
[2026-02-20 04:00:15] 2026-02-20 06:13:39,741 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-20 04:00:15] 2026-02-20 06:13:45,328 | INFO     | PID=2697083 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-20 04:00:15] 2026-02-20 06:13:45,328 | INFO     | .. there are 28 such processes running
[2026-02-20 04:00:15] 2026-02-20 06:13:45,328 | INFO     | found 0 job(s) in 20 queues
[2026-02-20 04:00:15] 2026-02-20 06:13:45,328 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-20 04:00:15] 2026-02-20 06:13:45,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-20 04:00:15] 2026-02-20 06:13:45,372 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-20 04:00:15] 2026-02-20 06:13:45,372 | INFO     | [monitor] control thread has ended
[2026-02-20 04:00:15] 2026-02-20 06:13:46,064 [wrapper] ==== pilot stdout END ====
[2026-02-20 04:00:15] 2026-02-20 06:13:46,098 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-20 04:00:15] 2026-02-20 06:13:46,139 [wrapper] pilotpid: 2697083
[2026-02-20 04:00:15] 2026-02-20 06:13:46,164 [wrapper] Pilot exit status: 0
[2026-02-20 04:00:15] 2026-02-20 06:13:46,246 [wrapper] pandaids: 7021103327 7021103327
[2026-02-20 04:00:15] 2026-02-20 06:13:46,425 [wrapper] cleanup supervisor_pilot 1183670 2697084
[2026-02-20 04:00:15] 2026-02-20 06:13:46,441 [wrapper] Test setup, not cleaning
[2026-02-20 04:00:15] 2026-02-20 06:13:46,456 [wrapper] apfmon messages muted
[2026-02-20 04:00:15] 2026-02-20 06:13:46,515 [wrapper] ==== wrapper stdout END ====
[2026-02-20 04:00:15] 2026-02-20 06:13:46,541 [wrapper] ==== wrapper stderr END ====
[2026-02-20 04:00:15]  *** Error codes and diagnostics ***
[2026-02-20 04:00:15]     "exeErrorCode": 0,
[2026-02-20 04:00:15]     "exeErrorDiag": "",
[2026-02-20 04:00:15]     "pilotErrorCode": 0,
[2026-02-20 04:00:15]     "pilotErrorDiag": "",
[2026-02-20 04:00:15]  *** Listing of results directory ***
[2026-02-20 04:00:15] total 1618964
[2026-02-20 04:00:15] drwx------. 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-02-20 04:00:15] -rw-r--r--. 1 boincer umatlas    584627 Feb 18 21:42 pilot3.tar.gz
[2026-02-20 04:00:15] -rwx------. 1 boincer umatlas     36322 Feb 18 21:44 runpilot2-wrapper.sh
[2026-02-20 04:00:15] -rw-r--r--. 1 boincer umatlas      5111 Feb 18 21:46 queuedata.json
[2026-02-20 04:00:15] -rw-r--r--. 1 boincer umatlas       100 Feb 19 11:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-20 04:00:15] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 19 11:18 run_atlas
[2026-02-20 04:00:15] -rw-r--r--. 1 boincer umatlas       105 Feb 19 11:18 job.xml
[2026-02-20 04:00:15] -rw-r--r--. 3 boincer umatlas 680131548 Feb 19 11:18 EVNT.48508760._000783.pool.root.1
[2026-02-20 04:00:15] -rw-r--r--. 3 boincer umatlas 680131548 Feb 19 11:18 ATLAS.root_0
[2026-02-20 04:00:15] -rw-r--r--. 2 boincer umatlas     15845 Feb 19 11:18 start_atlas.sh
[2026-02-20 04:00:15] drwxrwx--x. 2 boincer umatlas      4096 Feb 19 11:18 shared
[2026-02-20 04:00:15] -rw-r--r--. 2 boincer umatlas    597958 Feb 19 11:18 input.tar.gz
[2026-02-20 04:00:15] -rw-r--r--. 1 boincer umatlas         0 Feb 19 11:18 boinc_lockfile
[2026-02-20 04:00:15] -rw-r--r--. 1 boincer umatlas      2552 Feb 19 12:10 pandaJob.out
[2026-02-20 04:00:15] -rw-------. 1 boincer umatlas        57 Feb 19 12:10 setup.sh.local
[2026-02-20 04:00:15] -rw-------. 1 boincer umatlas   1001583 Feb 19 12:11 agis_schedconf.cvmfs.json
[2026-02-20 04:00:15] -rw-------. 1 boincer umatlas       442 Feb 19 12:11 workernode_map.json
[2026-02-20 04:00:15] -rw-------. 1 boincer umatlas 279604789 Feb 20 01:11 HITS.48508763._040921.pool.root.1
[2026-02-20 04:00:15] -rw-r--r--. 1 boincer umatlas       531 Feb 20 01:11 boinc_task_state.xml
[2026-02-20 04:00:15] -rw-------. 1 boincer umatlas        96 Feb 20 01:12 pilot_heartbeat.json
[2026-02-20 04:00:15] -rw-------. 1 boincer umatlas      1066 Feb 20 01:12 memory_monitor_summary.json
[2026-02-20 04:00:15] -rw-------. 1 boincer umatlas   1513015 Feb 20 01:13 agis_ddmendpoints.agis.ALL.json
[2026-02-20 04:00:15] -rw-------. 1 boincer umatlas    954686 Feb 20 01:13 log.48508763._040921.job.log.tgz.1
[2026-02-20 04:00:15] -rw-------. 1 boincer umatlas      6403 Feb 20 01:13 heartbeat.json
[2026-02-20 04:00:15] -rw-------. 1 boincer umatlas       823 Feb 20 01:13 pilotlog.txt
[2026-02-20 04:00:15] -rw-------. 1 boincer umatlas   6053215 Feb 20 01:13 log.48508763._040921.job.log.1
[2026-02-20 04:00:15] -rw-------. 1 boincer umatlas       357 Feb 20 01:13 output.list
[2026-02-20 04:00:15] -rw-r--r--. 1 boincer umatlas       620 Feb 20 01:13 runtime_log
[2026-02-20 04:00:15] -rw-------. 1 boincer umatlas   7024640 Feb 20 01:13 result.tar.gz
[2026-02-20 04:00:15] -rw-r--r--. 1 boincer umatlas      9434 Feb 20 01:13 runtime_log.err
[2026-02-20 04:00:15] -rw-------. 1 boincer umatlas       787 Feb 20 01:13 fRpNDmhC9C9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm8ExKDmDQSK9m.diag
[2026-02-20 04:00:15] -rw-r--r--. 1 boincer umatlas      6843 Feb 20 04:00 init_data.xml
[2026-02-20 04:00:15] -rw-r--r--. 1 boincer umatlas        28 Feb 20 04:00 wrapper_checkpoint.txt
[2026-02-20 04:00:15] -rw-r--r--. 1 boincer umatlas      8192 Feb 20 04:00 boinc_mmap_file
[2026-02-20 04:00:15] -rw-r--r--. 1 boincer umatlas     23624 Feb 20 04:00 stderr.txt
[2026-02-20 04:00:15] HITS file was successfully produced:
[2026-02-20 04:00:15] -rw-------. 1 boincer umatlas 279604789 Feb 20 01:11 shared/HITS.pool.root.1
[2026-02-20 04:00:15]  *** Contents of shared directory: ***
[2026-02-20 04:00:15] total 944712
[2026-02-20 04:00:15] -rw-r--r--. 3 boincer umatlas 680131548 Feb 19 11:18 ATLAS.root_0
[2026-02-20 04:00:15] -rw-r--r--. 2 boincer umatlas     15845 Feb 19 11:18 start_atlas.sh
[2026-02-20 04:00:15] -rw-r--r--. 2 boincer umatlas    597958 Feb 19 11:18 input.tar.gz
[2026-02-20 04:00:15] -rw-------. 1 boincer umatlas 279604789 Feb 20 01:11 HITS.pool.root.1
[2026-02-20 04:00:15] -rw-------. 1 boincer umatlas   7024640 Feb 20 01:13 result.tar.gz
04:00:16 (2689251): run_atlas exited; CPU time 64109.034499
04:00:16 (2689251): called boinc_finish(0)

</stderr_txt>
]]>

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