Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-19 10:46:41 (3811517): vboxwrapper version 26210
2026-02-19 10:46:41 (3811517): BOINC client version: 8.2.8
2026-02-19 10:46:42 (3811517): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2026-02-19 10:46:42 (3811517): Successfully copied 'init_data.xml' to the shared directory.
2026-02-19 10:46:43 (3811517): Create VM. (boinc_3a465e50286b9dbd, slot#76)
2026-02-19 10:46:43 (3811517): Setting Memory Size for VM. (4608MB)
2026-02-19 10:46:43 (3811517): Setting CPU Count for VM. (2)
2026-02-19 10:46:44 (3811517): Setting Chipset Options for VM.
2026-02-19 10:46:44 (3811517): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-19 10:46:44 (3811517): Setting Boot Options for VM.
2026-02-19 10:46:45 (3811517): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-19 10:46:45 (3811517): Enabling VM Network Access.
2026-02-19 10:46:45 (3811517): Disabling USB Support for VM.
2026-02-19 10:46:46 (3811517): Disabling COM Port Support for VM.
2026-02-19 10:46:46 (3811517): Disabling LPT Port Support for VM.
2026-02-19 10:46:46 (3811517): Disabling Audio Support for VM.
2026-02-19 10:46:47 (3811517): Disabling Clipboard Support for VM.
2026-02-19 10:46:47 (3811517): Disabling Drag and Drop Support for VM.
2026-02-19 10:46:47 (3811517): Adding storage controller(s) to VM.
2026-02-19 10:46:47 (3811517): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-19 10:46:48 (3811517): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-19 10:46:48 (3811517): forwarding host port 50419 to guest port 80
2026-02-19 10:46:48 (3811517): Enabling remote desktop for VM.
2026-02-19 10:46:49 (3811517): Enabling shared directory for VM.
2026-02-19 10:46:50 (3811517): Starting VM using VBoxManage interface. (boinc_3a465e50286b9dbd, slot#76)
2026-02-19 10:46:51 (3811517): Successfully started VM. (PID = '3812328')
2026-02-19 10:46:51 (3811517): Reporting VM Process ID to BOINC.
2026-02-19 10:46:51 (3811517): Guest Log: BIOS: VirtualBox 7.2.2
2026-02-19 10:46:51 (3811517): Guest Log: CPUID EDX: 0x178bfbff
2026-02-19 10:46:51 (3811517): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-19 10:46:51 (3811517): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-19 10:46:51 (3811517): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-19 10:46:51 (3811517): Detected: Web Application Enabled (http://localhost:50419)
2026-02-19 10:46:51 (3811517): Detected: Remote Desktop Enabled (localhost:44169)
2026-02-19 10:46:51 (3811517): Preference change detected
2026-02-19 10:46:51 (3811517): Setting CPU throttle for VM. (100%)
2026-02-19 10:46:51 (3811517): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-19 10:46:53 (3811517): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-19 10:46:53 (3811517): Guest Log: BIOS: Booting from Hard Disk...
2026-02-19 10:46:56 (3811517): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-19 10:46:56 (3811517): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-19 10:46:56 (3811517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-19 10:47:03 (3811517): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-19 10:47:03 (3811517): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-19 10:47:15 (3811517): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-19 10:47:15 (3811517): Guest Log: 00:00:00.000327 main     Log opened 2026-02-19T09:47:13.583768000Z
2026-02-19 10:47:15 (3811517): Guest Log: 00:00:00.000504 main     OS Product: Linux
2026-02-19 10:47:15 (3811517): Guest Log: 00:00:00.000568 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-19 10:47:15 (3811517): Guest Log: 00:00:00.000625 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-19 10:47:15 (3811517): Guest Log: 00:00:00.000662 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-19 10:47:15 (3811517): Guest Log: 00:00:00.000664 main     Process ID: 1273
2026-02-19 10:47:15 (3811517): Guest Log: 00:00:00.000664 main     Package type: LINUX_64BITS_GENERIC
2026-02-19 10:47:15 (3811517): Guest Log: 00:00:00.002661 main     5.2.32 r132073 started. Verbose level = 0
2026-02-19 10:47:16 (3811517): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-19 10:47:16 (3811517): Guest Log: [INFO] Mounting shared directory
2026-02-19 10:47:16 (3811517): Guest Log: [INFO] Checking for init_data.xml
2026-02-19 10:48:13 (3811517): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-19 10:48:13 (3811517): Guest Log: [INFO] Detected branch: prod
2026-02-19 10:48:13 (3811517): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-19 10:48:13 (3811517): Guest Log: Copying input files
2026-02-19 10:48:15 (3811517): Guest Log: Copied input files into RunAtlas.
2026-02-19 10:48:16 (3811517): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2026-02-19 10:48:27 (3811517): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-19 10:48:28 (3811517): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-19 10:48:28 (3811517): Guest Log: 2.6.3.0 1571 0 29524 156405 3 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2026-02-19 10:48:30 (3811517): Guest Log: copied the webapp to /var/www
2026-02-19 10:48:30 (3811517): Guest Log: ATHENA_PROC_NUMBER=2
2026-02-19 10:48:30 (3811517): Guest Log: ATHENA_CORE_NUMBER=2
2026-02-19 10:48:30 (3811517): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-19 10:48:30 (3811517): Guest Log:  *** Starting ATLAS job. (PandaID=7019721540 taskID=48700946) ***
2026-02-19 12:25:52 (3811517): Status Report: Elapsed Time: '6000.000000'
2026-02-19 12:25:52 (3811517): Status Report: CPU Time: '11192.860000'
2026-02-19 14:04:53 (3811517): Status Report: Elapsed Time: '12000.000000'
2026-02-19 14:04:53 (3811517): Status Report: CPU Time: '23068.190000'
2026-02-19 15:43:53 (3811517): Status Report: Elapsed Time: '18000.000000'
2026-02-19 15:43:53 (3811517): Status Report: CPU Time: '34942.010000'
2026-02-19 17:22:54 (3811517): Status Report: Elapsed Time: '24000.000000'
2026-02-19 17:22:54 (3811517): Status Report: CPU Time: '46818.920000'
2026-02-19 17:51:12 (3811517): Guest Log:  *** Job finished ***
2026-02-19 17:51:12 (3811517): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-19 17:51:12 (3811517): Guest Log: 2026-02-19 16:50:41,229 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-19 17:51:12 (3811517): Guest Log: 2026-02-19 16:50:41,229 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-19 17:51:12 (3811517): Guest Log: 2026-02-19 16:51:04,873 | INFO     | [monitor] cgroup control has ended
2026-02-19 17:51:12 (3811517): Guest Log: 2026-02-19 16:51:05,687 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140381229328192)>', '<ExcThread(monitor, started 140380620166912)>']
2026-02-19 17:51:12 (3811517): Guest Log: 2026-02-19 16:51:06,493 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-19 17:51:12 (3811517): Guest Log: 2026-02-19 16:51:06,494 | INFO     | [monitor] control thread has ended
2026-02-19 17:51:12 (3811517): Guest Log: 2026-02-19 16:51:10,693 | INFO     | all workflow threads have been joined
2026-02-19 17:51:12 (3811517): Guest Log: 2026-02-19 16:51:10,693 | INFO     | end of generic workflow (traces error code: 0)
2026-02-19 17:51:12 (3811517): Guest Log: 2026-02-19 16:51:10,694 | INFO     | traces error code: 0
2026-02-19 17:51:12 (3811517): Guest Log: 2026-02-19 16:51:10,694 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-19 17:51:12 (3811517): Guest Log: 2026-02-19 16:51:10,863 [wrapper] ==== pilot stdout END ====
2026-02-19 17:51:12 (3811517): Guest Log: 2026-02-19 16:51:10,874 [wrapper] ==== wrapper stdout RESUME ====
2026-02-19 17:51:12 (3811517): Guest Log: 2026-02-19 16:51:10,885 [wrapper] pilotpid: 5949
2026-02-19 17:51:12 (3811517): Guest Log: 2026-02-19 16:51:10,897 [wrapper] Pilot exit status: 0
2026-02-19 17:51:12 (3811517): Guest Log: 2026-02-19 16:51:10,928 [wrapper] pandaids: 7019721540
2026-02-19 17:51:12 (3811517): Guest Log: 2026-02-19 16:51:10,986 [wrapper] cleanup supervisor_pilot 31663 5950
2026-02-19 17:51:12 (3811517): Guest Log: 2026-02-19 16:51:10,994 [wrapper] Test setup, not cleaning
2026-02-19 17:51:12 (3811517): Guest Log: 2026-02-19 16:51:11,001 [wrapper] apfmon messages muted
2026-02-19 17:51:12 (3811517): Guest Log: 2026-02-19 16:51:11,008 [wrapper] ==== wrapper stdout END ====
2026-02-19 17:51:12 (3811517): Guest Log: 2026-02-19 16:51:11,015 [wrapper] ==== wrapper stderr END ====
2026-02-19 17:51:12 (3811517): Guest Log:  *** Error codes and diagnostics ***
2026-02-19 17:51:12 (3811517): Guest Log:     "exeErrorCode": 0,
2026-02-19 17:51:12 (3811517): Guest Log:     "exeErrorDiag": "",
2026-02-19 17:51:12 (3811517): Guest Log:     "pilotErrorCode": 0,
2026-02-19 17:51:12 (3811517): Guest Log:     "pilotErrorDiag": "",
2026-02-19 17:51:12 (3811517): Guest Log:  *** Listing of results directory ***
2026-02-19 17:51:12 (3811517): Guest Log: total 153932
2026-02-19 17:51:12 (3811517): Guest Log: -rw-r--r--. 1 atlas atlas    602657 Feb  3 11:11 pilot3.tar.gz
2026-02-19 17:51:12 (3811517): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 18 21:26 runpilot2-wrapper.sh
2026-02-19 17:51:12 (3811517): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 18 21:32 queuedata.json
2026-02-19 17:51:12 (3811517): Guest Log: -rw-r--r--. 1 atlas atlas    616289 Feb 19 09:48 input.tar.gz
2026-02-19 17:51:12 (3811517): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Feb 19 09:48 start_atlas.sh
2026-02-19 17:51:12 (3811517): Guest Log: -rw-r--r--. 1 atlas atlas      9781 Feb 19 09:48 init_data.xml
2026-02-19 17:51:12 (3811517): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 19 09:48 EVNT.48700944._000001.pool.root.1 -> /data/./ATLAS.root_0
2026-02-19 17:51:12 (3811517): Guest Log: -rw-r--r--. 1 atlas atlas      2521 Feb 19 09:48 pandaJob.out
2026-02-19 17:51:12 (3811517): Guest Log: -rw-------. 1 atlas atlas        50 Feb 19 09:48 setup.sh.local
2026-02-19 17:51:12 (3811517): Guest Log: -rw-------. 1 atlas atlas   1001083 Feb 19 09:49 agis_schedconf.cvmfs.json
2026-02-19 17:51:12 (3811517): Guest Log: -rw-------. 1 atlas atlas       428 Feb 19 09:49 workernode_map.json
2026-02-19 17:51:12 (3811517): Guest Log: drwx------. 7 atlas atlas      4096 Feb 19 09:49 pilot3
2026-02-19 17:51:12 (3811517): Guest Log: -rw-------. 1 atlas atlas 145707973 Feb 19 16:49 HITS.48700946._000018.pool.root.1
2026-02-19 17:51:12 (3811517): Guest Log: -rw-------. 1 atlas atlas      1027 Feb 19 16:50 memory_monitor_summary.json
2026-02-19 17:51:12 (3811517): Guest Log: -rw-------. 1 atlas atlas   1513015 Feb 19 16:50 agis_ddmendpoints.agis.ALL.json
2026-02-19 17:51:12 (3811517): Guest Log: -rw-------. 1 atlas atlas    523811 Feb 19 16:50 log.48700946._000018.job.log.tgz.1
2026-02-19 17:51:12 (3811517): Guest Log: -rw-------. 1 atlas atlas      6368 Feb 19 16:50 heartbeat.json
2026-02-19 17:51:12 (3811517): Guest Log: -rw-------. 1 atlas atlas        95 Feb 19 16:50 pilot_heartbeat.json
2026-02-19 17:51:12 (3811517): Guest Log: -rw-------. 1 atlas atlas      5059 Feb 19 16:51 pilotlog.txt
2026-02-19 17:51:12 (3811517): Guest Log: -rw-------. 1 atlas atlas   3477664 Feb 19 16:51 log.48700946._000018.job.log.1
2026-02-19 17:51:12 (3811517): Guest Log: -rw-------. 1 atlas atlas       357 Feb 19 16:51 output.list
2026-02-19 17:51:12 (3811517): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 19 16:51 runtime_log
2026-02-19 17:51:12 (3811517): Guest Log: -rw-------. 1 atlas atlas   4024320 Feb 19 16:51 result.tar.gz
2026-02-19 17:51:12 (3811517): Guest Log: -rw-r--r--. 1 atlas atlas      9238 Feb 19 16:51 runtime_log.err
2026-02-19 17:51:12 (3811517): Guest Log: -rw-------. 1 atlas atlas       658 Feb 19 16:51 J3tLDmeF4C9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDml1wKDm83UnOn.diag
2026-02-19 17:51:12 (3811517): Guest Log: Looking for outputfile HITS.48700946._000018.pool.root.1
2026-02-19 17:51:12 (3811517): Guest Log: HITS file was successfully produced
2026-02-19 17:51:12 (3811517): Guest Log: -rw-------. 1 atlas atlas 145707973 Feb 19 16:49 /home/atlas/RunAtlas/HITS.48700946._000018.pool.root.1
2026-02-19 17:51:12 (3811517): Guest Log: Successfully finished the ATLAS job!
2026-02-19 17:51:12 (3811517): Guest Log: Copying the results back to the shared directory!
2026-02-19 17:51:12 (3811517): Guest Log:  *** Contents of shared directory: ***
2026-02-19 17:51:12 (3811517): Guest Log: total 190476
2026-02-19 17:51:12 (3811517): Guest Log: -rw-r--r--. 1 root root 190365768 Feb 19 09:46 ATLAS.root_0
2026-02-19 17:51:12 (3811517): Guest Log: -rw-r--r--. 1 root root      9781 Feb 19 09:46 init_data.xml
2026-02-19 17:51:12 (3811517): Guest Log: -rw-r--r--. 1 root root    616289 Feb 19 09:46 input.tar.gz
2026-02-19 17:51:12 (3811517): Guest Log: -rw-r--r--. 1 root root   4024320 Feb 19 16:51 result.tar.gz
2026-02-19 17:51:12 (3811517): Guest Log: -rw-r--r--. 1 root root     15845 Feb 19 09:46 start_atlas.sh
2026-02-19 17:51:12 (3811517): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-19 17:51:12 (3811517): VM Completion File Detected.
2026-02-19 17:51:12 (3811517): Powering off VM.
2026-02-19 17:51:13 (3811517): Successfully stopped VM.
2026-02-19 17:51:13 (3811517): Deregistering VM. (boinc_3a465e50286b9dbd, slot#76)
2026-02-19 17:51:13 (3811517): Removing network bandwidth throttle group from VM.
2026-02-19 17:51:14 (3811517): Removing VM from VirtualBox.
2026-02-19 17:51:19 (3811517): called boinc_finish(0)

</stderr_txt>
]]>

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