Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
10:22:30 (4037922): wrapper (7.7.26015): starting
10:22:30 (4037922): wrapper: running run_atlas (--nthreads 4)
[2026-02-19 10:22:30] Arguments: --nthreads 4
[2026-02-19 10:22:30] Threads: 4
[2026-02-19 10:22:30] Checking for CVMFS
[2026-02-19 10:22:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-19 10:22:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-19 10:22:31] Running cvmfs_config stat atlas.cern.ch
[2026-02-19 10:22:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-19 10:22:31] 2.13.1.0 1296585 4401 86572 156405 2 50 5946077 10240001 1822 130560 0 6443052 99.995 177616 169 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-02-19 10:22:31] CVMFS is ok
[2026-02-19 10:22:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-19 10:22:31] Checking for apptainer binary...
[2026-02-19 10:22:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-19 10:22:31] Running /usr/bin/apptainer --version
[2026-02-19 10:22:31] apptainer version 1.4.5
[2026-02-19 10:22:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-19 10:22:31] julianvlneu
[2026-02-19 10:22:31] apptainer works
[2026-02-19 10:22:31] Set ATHENA_PROC_NUMBER=4
[2026-02-19 10:22:31] Set ATHENA_CORE_NUMBER=4
[2026-02-19 10:22:31] Starting ATLAS job with PandaID=7019798446
[2026-02-19 10:22:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-19 11:45:04]  *** The last 200 lines of the pilot log: ***
[2026-02-19 11:45:04]  is_tar=False
[2026-02-19 11:45:04]  lfn=log.48508763._038392.job.log.tgz.1
[2026-02-19 11:45:04]  mtime=0
[2026-02-19 11:45:04]  protocol_id=None
[2026-02-19 11:45:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-19 11:45:04]  replicas=None
[2026-02-19 11:45:04]  scope=mc23_13p6TeV
[2026-02-19 11:45:04]  status=None
[2026-02-19 11:45:04]  status_code=0
[2026-02-19 11:45:04]  storage_token=
[2026-02-19 11:45:04]  surl=/var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-7019798446/log.48508763._038392.job.log.tgz.1
[2026-02-19 11:45:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/fd/log.48508763._038392.job.log.tgz.1
[2026-02-19 11:45:04]  workdir=None
[2026-02-19 11:45:04] ]
[2026-02-19 11:45:04] 2026-02-19 10:44:28,840 | INFO     | transferring file log.48508763._038392.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-7019798446/log.48508763._038392.job.log.tgz.1 to /var/li
[2026-02-19 11:45:04] 2026-02-19 10:44:28,841 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-7019798446/log.48508763._038392.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2026-02-19 11:45:04] 2026-02-19 10:44:28,865 | INFO     | adding to output.list: log.48508763._038392.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/fd/log.48508763._038392.job.log.tg
[2026-02-19 11:45:04] 2026-02-19 10:44:28,866 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-19 11:45:04] 2026-02-19 10:44:28,867 | INFO     | summary of transferred files:
[2026-02-19 11:45:04] 2026-02-19 10:44:28,867 | INFO     |  -- lfn=log.48508763._038392.job.log.tgz.1, status_code=0, status=transferred
[2026-02-19 11:45:04] 2026-02-19 10:44:28,867 | INFO     | stage-out finished correctly
[2026-02-19 11:45:04] 2026-02-19 10:44:28,960 | INFO     | time since job start (4896s) is within the limit (349056.0s)
[2026-02-19 11:45:04] 2026-02-19 10:44:30,087 | INFO     | PID=4041954 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-19 11:45:04] 2026-02-19 10:44:30,087 | INFO     | .. there are 3 such processes running
[2026-02-19 11:45:04] 2026-02-19 10:44:30,516 | INFO     | monitor loop #375: job 0:7019798446 is in state 'finished'
[2026-02-19 11:45:04] 2026-02-19 10:44:30,516 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-19 11:45:04] 2026-02-19 10:44:31,088 | INFO     | time since job start (4899s) is within the limit (349056.0s)
[2026-02-19 11:45:04] 2026-02-19 10:44:31,221 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-19 11:45:04] 2026-02-19 10:44:31,246 | INFO     | job 7019798446 has state=finished
[2026-02-19 11:45:04] 2026-02-19 10:44:31,246 | INFO     | preparing for final server update for job 7019798446 in state='finished'
[2026-02-19 11:45:04] 2026-02-19 10:44:31,865 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-19 11:45:04] 2026-02-19 10:44:31,866 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-7019798446/jobReport.json
[2026-02-19 11:45:04] 2026-02-19 10:44:31,867 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/2/workernode_map.json
[2026-02-19 11:45:04] 2026-02-19 10:44:31,867 | INFO     | this job has now completed (state=finished)
[2026-02-19 11:45:04] 2026-02-19 10:44:31,867 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-19 11:45:04] 2026-02-19 10:44:31,867 | INFO     | log transfer has been attempted: DONE
[2026-02-19 11:45:04] 2026-02-19 10:44:31,867 | INFO     | job 7019798446 has finished - writing final server update
[2026-02-19 11:45:04] 2026-02-19 10:44:31,867 | INFO     | total number of processed events: 400 (read)
[2026-02-19 11:45:04] 2026-02-19 10:44:31,868 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-7019798446/memory_monitor_summary.json (trf name=prmon)
[2026-02-19 11:45:04] 2026-02-19 10:44:31,869 | INFO     | extracted standard info from prmon json
[2026-02-19 11:45:04] 2026-02-19 10:44:31,869 | INFO     | extracted standard memory fields from prmon json
[2026-02-19 11:45:04] 2026-02-19 10:44:31,869 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-19 11:45:04] 2026-02-19 10:44:31,869 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-19 11:45:04] 2026-02-19 10:44:31,869 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-19 11:45:04] 2026-02-19 10:44:31,870 | INFO     | fitting pss+swap vs Time
[2026-02-19 11:45:04] 2026-02-19 10:44:31,870 | INFO     | sum of square deviations: 120605052.0
[2026-02-19 11:45:04] 2026-02-19 10:44:31,870 | INFO     | sum of deviations: -6712729627.999999
[2026-02-19 11:45:04] 2026-02-19 10:44:31,870 | INFO     | mean x: 1771495498.0
[2026-02-19 11:45:04] 2026-02-19 10:44:31,870 | INFO     | mean y: 2504030.109589041
[2026-02-19 11:45:04] 2026-02-19 10:44:31,870 | INFO     | intersect: 98601775935.3463
[2026-02-19 11:45:04] 2026-02-19 10:44:31,870 | INFO     | chi2: 0.043015201351035454
[2026-02-19 11:45:04] 2026-02-19 10:44:31,870 | INFO     | current memory leak: -55.66 B/s (using 73 data points, chi2=0.04)
[2026-02-19 11:45:04] 2026-02-19 10:44:31,871 | INFO     | could have reported an average CPU frequency of 4399 MHz (6 samples)
[2026-02-19 11:45:04] 2026-02-19 10:44:31,871 | INFO     | ..............................
[2026-02-19 11:45:04] 2026-02-19 10:44:31,871 | INFO     | . Timing measurements:
[2026-02-19 11:45:04] 2026-02-19 10:44:31,871 | INFO     | . get job = 0 s
[2026-02-19 11:45:04] 2026-02-19 10:44:31,871 | INFO     | . initial setup = 7 s
[2026-02-19 11:45:04] 2026-02-19 10:44:31,871 | INFO     | . payload setup = 7 s
[2026-02-19 11:45:04] 2026-02-19 10:44:31,871 | INFO     | . stage-in = 0 s
[2026-02-19 11:45:04] 2026-02-19 10:44:31,871 | INFO     | . payload execution = 4873 s
[2026-02-19 11:45:04] 2026-02-19 10:44:31,871 | INFO     | . stage-out = 0 s
[2026-02-19 11:45:04] 2026-02-19 10:44:31,871 | INFO     | . log creation = 0 s
[2026-02-19 11:45:04] 2026-02-19 10:44:31,871 | INFO     | ..............................
[2026-02-19 11:45:04] 2026-02-19 10:44:31,983 | INFO     | 
[2026-02-19 11:45:04] 2026-02-19 10:44:31,983 | INFO     | job summary report
[2026-02-19 11:45:04] 2026-02-19 10:44:31,983 | INFO     | --------------------------------------------------
[2026-02-19 11:45:04] 2026-02-19 10:44:31,983 | INFO     | PanDA job id: 7019798446
[2026-02-19 11:45:04] 2026-02-19 10:44:31,983 | INFO     | task id: 48508763
[2026-02-19 11:45:04] 2026-02-19 10:44:31,983 | INFO     | errors: (none)
[2026-02-19 11:45:04] 2026-02-19 10:44:31,983 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-19 11:45:04] 2026-02-19 10:44:31,983 | INFO     | pilot state: finished 
[2026-02-19 11:45:04] 2026-02-19 10:44:31,983 | INFO     | transexitcode: 0
[2026-02-19 11:45:04] 2026-02-19 10:44:31,983 | INFO     | exeerrorcode: 0
[2026-02-19 11:45:04] 2026-02-19 10:44:31,983 | INFO     | exeerrordiag: 
[2026-02-19 11:45:04] 2026-02-19 10:44:31,983 | INFO     | exitcode: 0
[2026-02-19 11:45:04] 2026-02-19 10:44:31,983 | INFO     | exitmsg: OK
[2026-02-19 11:45:04] 2026-02-19 10:44:31,983 | INFO     | cpuconsumptiontime: 18542 s
[2026-02-19 11:45:04] 2026-02-19 10:44:31,983 | INFO     | nevents: 400
[2026-02-19 11:45:04] 2026-02-19 10:44:31,983 | INFO     | neventsw: 0
[2026-02-19 11:45:04] 2026-02-19 10:44:31,983 | INFO     | pid: 4046510
[2026-02-19 11:45:04] 2026-02-19 10:44:31,983 | INFO     | pgrp: 4046510
[2026-02-19 11:45:04] 2026-02-19 10:44:31,983 | INFO     | corecount: 4
[2026-02-19 11:45:04] 2026-02-19 10:44:31,983 | INFO     | event service: False
[2026-02-19 11:45:04] 2026-02-19 10:44:31,983 | INFO     | sizes: {0: 2282276, 11: 2282276, 4884: 2308548, 4886: 2317574, 4888: 2317630, 4889: 2317824}
[2026-02-19 11:45:04] 2026-02-19 10:44:31,983 | INFO     | --------------------------------------------------
[2026-02-19 11:45:04] 2026-02-19 10:44:31,984 | INFO     | 
[2026-02-19 11:45:04] 2026-02-19 10:44:31,984 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/2
[2026-02-19 11:45:04] 2026-02-19 10:44:32,008 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-19 11:45:04] 2026-02-19 10:44:32,009 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-19 11:45:04] 2026-02-19 10:44:32,009 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-19 11:45:04] 2026-02-19 10:44:32,009 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-19 11:45:04] 2026-02-19 10:44:32,009 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-19 11:45:04] 2026-02-19 10:44:32,009 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-19 11:45:04] 2026-02-19 10:44:32,009 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-19 11:45:04] 2026-02-19 10:44:32,009 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-19 11:45:04] 2026-02-19 10:44:32,009 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-19 11:45:04] 2026-02-19 10:44:32,009 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-19 11:45:04] 2026-02-19 10:44:32,009 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-19 11:45:04] 2026-02-19 10:44:32,009 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-19 11:45:04] 2026-02-19 10:44:32,009 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-19 11:45:04] 2026-02-19 10:44:32,009 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-19 11:45:04] 2026-02-19 10:44:32,009 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-19 11:45:04] 2026-02-19 10:44:32,009 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-19 11:45:04] 2026-02-19 10:44:32,009 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-19 11:45:04] 2026-02-19 10:44:32,009 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-19 11:45:04] 2026-02-19 10:44:32,009 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-19 11:45:04] 2026-02-19 10:44:32,009 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-19 11:45:04] 2026-02-19 10:44:32,010 | INFO     | job 7019798446 has completed (purged errors)
[2026-02-19 11:45:04] 2026-02-19 10:44:32,010 | INFO     | overall cleanup function is called
[2026-02-19 11:45:04] 2026-02-19 10:44:33,017 | INFO     | --- collectZombieJob: --- 10, [4046510]
[2026-02-19 11:45:04] 2026-02-19 10:44:33,017 | INFO     | zombie collector waiting for pid 4046510
[2026-02-19 11:45:04] 2026-02-19 10:44:33,017 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-19 11:45:04] 2026-02-19 10:44:33,017 | INFO     | collected zombie processes
[2026-02-19 11:45:04] 2026-02-19 10:44:33,017 | INFO     | will attempt to kill all subprocesses of pid=4046510
[2026-02-19 11:45:04] 2026-02-19 10:44:33,129 | INFO     | process IDs to be killed: [4046510] (in reverse order)
[2026-02-19 11:45:04] 2026-02-19 10:44:33,195 | WARNING  | found no corresponding commands to process id(s)
[2026-02-19 11:45:04] 2026-02-19 10:44:33,195 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-19 11:45:04] 2026-02-19 10:44:33,199 | INFO     | did not find any defunct processes belonging to 4046510
[2026-02-19 11:45:04] 2026-02-19 10:44:33,202 | INFO     | did not find any defunct processes belonging to 4046510
[2026-02-19 11:45:04] 2026-02-19 10:44:33,203 | INFO     | ready for new job
[2026-02-19 11:45:04] 2026-02-19 10:44:33,203 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-19 11:45:04] 2026-02-19 10:44:33,204 | INFO     | **************************************
[2026-02-19 11:45:04] 2026-02-19 10:44:33,205 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-19 11:45:04] 2026-02-19 10:44:33,205 | INFO     | **************************************
[2026-02-19 11:45:04] 2026-02-19 10:44:33,205 | INFO     | 
[2026-02-19 11:45:04] 2026-02-19 10:44:33,205 | INFO     | pilot is running in a VM
[2026-02-19 11:45:04] 2026-02-19 10:44:33,205 | INFO     | architecture information:
[2026-02-19 11:45:04] 2026-02-19 10:44:33,205 | INFO     | executing command: cat /etc/os-release
[2026-02-19 11:45:04] 2026-02-19 10:44:33,221 | INFO     | cat /etc/os-release:
[2026-02-19 11:45:04] NAME="CentOS Linux"
[2026-02-19 11:45:04] VERSION="7 (Core)"
[2026-02-19 11:45:04] ID="centos"
[2026-02-19 11:45:04] ID_LIKE="rhel fedora"
[2026-02-19 11:45:04] VERSION_ID="7"
[2026-02-19 11:45:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-19 11:45:04] ANSI_COLOR="0;31"
[2026-02-19 11:45:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-19 11:45:04] HOME_URL="https://www.centos.org/"
[2026-02-19 11:45:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-19 11:45:04] 
[2026-02-19 11:45:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-19 11:45:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-19 11:45:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-19 11:45:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-19 11:45:04] 
[2026-02-19 11:45:04] 2026-02-19 10:44:33,222 | INFO     | **************************************
[2026-02-19 11:45:04] 2026-02-19 10:44:33,725 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2026-02-19 11:45:04] 2026-02-19 10:44:33,741 | INFO     | sufficient remaining disk space (134246039552 B)
[2026-02-19 11:45:04] 2026-02-19 10:44:33,742 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-19 11:45:04] 2026-02-19 10:44:33,742 | INFO     | current server update state: UPDATING_FINAL
[2026-02-19 11:45:04] 2026-02-19 10:44:33,742 | INFO     | update_server=False
[2026-02-19 11:45:04] 2026-02-19 10:44:33,742 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-19 11:45:04] 2026-02-19 10:44:33,742 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-19 11:45:04] 2026-02-19 10:44:33,743 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-19 11:45:04] 2026-02-19 10:44:34,026 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-19 11:45:04] 2026-02-19 10:44:34,027 | INFO     | aborting loop
[2026-02-19 11:45:04] 2026-02-19 10:44:34,406 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-19 11:45:04] 2026-02-19 10:44:34,578 | INFO     | all data control threads have been joined
[2026-02-19 11:45:04] 2026-02-19 10:44:34,748 | INFO     | [job] retrieve thread has finished
[2026-02-19 11:45:04] 2026-02-19 10:44:34,749 | INFO     | [job] queue monitor thread has finished
[2026-02-19 11:45:04] 2026-02-19 10:44:34,796 | INFO     | [data] copytool_in thread has finished
[2026-02-19 11:45:04] 2026-02-19 10:44:34,942 | INFO     | [payload] validate_post thread has finished
[2026-02-19 11:45:04] 2026-02-19 10:44:35,029 | INFO     | [job] job monitor thread has finished
[2026-02-19 11:45:04] 2026-02-19 10:44:35,172 | INFO     | all job control threads have been joined
[2026-02-19 11:45:04] 2026-02-19 10:44:35,195 | INFO     | all payload control threads have been joined
[2026-02-19 11:45:04] 2026-02-19 10:44:35,552 | INFO     | [payload] failed_post thread has finished
[2026-02-19 11:45:04] 2026-02-19 10:44:35,584 | INFO     | [data] control thread has finished
[2026-02-19 11:45:04] 2026-02-19 10:44:35,966 | INFO     | [job] validate thread has finished
[2026-02-19 11:45:04] 2026-02-19 10:44:36,018 | INFO     | [payload] execute_payloads thread has finished
[2026-02-19 11:45:04] 2026-02-19 10:44:36,041 | INFO     | [job] create_data_payload thread has finished
[2026-02-19 11:45:04] 2026-02-19 10:44:36,131 | INFO     | [payload] validate_pre thread has finished
[2026-02-19 11:45:04] 2026-02-19 10:44:36,178 | INFO     | [job] control thread has finished
[2026-02-19 11:45:04] 2026-02-19 10:44:36,201 | INFO     | [payload] control thread has finished
[2026-02-19 11:45:04] 2026-02-19 10:44:36,412 | INFO     | [data] copytool_out thread has finished
[2026-02-19 11:45:04] 2026-02-19 10:44:37,750 | INFO     | [data] queue_monitor thread has finished
[2026-02-19 11:45:04] 2026-02-19 10:44:44,322 | INFO     | job.realtimelogging is not enabled
[2026-02-19 11:45:04] 2026-02-19 10:44:45,328 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-19 11:45:04] 2026-02-19 10:44:57,973 | INFO     | [monitor] cgroup control has ended
[2026-02-19 11:45:04] 2026-02-19 10:44:58,235 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134581521508160)>', '<ExcThread(monitor, started 134580560447232)>']
[2026-02-19 11:45:04] 2026-02-19 10:45:03,246 | INFO     | all workflow threads have been joined
[2026-02-19 11:45:04] 2026-02-19 10:45:03,246 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-19 11:45:04] 2026-02-19 10:45:03,246 | INFO     | traces error code: 0
[2026-02-19 11:45:04] 2026-02-19 10:45:03,246 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-19 11:45:04] 2026-02-19 10:45:04,314 | INFO     | PID=4041954 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-19 11:45:04] 2026-02-19 10:45:04,315 | INFO     | .. there are 3 such processes running
[2026-02-19 11:45:04] 2026-02-19 10:45:04,315 | INFO     | found 0 job(s) in 20 queues
[2026-02-19 11:45:04] 2026-02-19 10:45:04,315 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-19 11:45:04] 2026-02-19 10:45:04,315 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-19 11:45:04] 2026-02-19 10:45:04,315 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-19 11:45:04] 2026-02-19 10:45:04,315 | INFO     | [monitor] control thread has ended
[2026-02-19 11:45:04] 2026-02-19 10:45:04,392 [wrapper] ==== pilot stdout END ====
[2026-02-19 11:45:04] 2026-02-19 10:45:04,398 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-19 11:45:04] 2026-02-19 10:45:04,403 [wrapper] pilotpid: 4041954
[2026-02-19 11:45:04] 2026-02-19 10:45:04,407 [wrapper] Pilot exit status: 0
[2026-02-19 11:45:04] 2026-02-19 10:45:04,427 [wrapper] pandaids: 7019798446
[2026-02-19 11:45:04] 2026-02-19 10:45:04,477 [wrapper] cleanup supervisor_pilot 4086236 4041955
[2026-02-19 11:45:04] 2026-02-19 10:45:04,482 [wrapper] Test setup, not cleaning
[2026-02-19 11:45:04] 2026-02-19 10:45:04,488 [wrapper] apfmon messages muted
[2026-02-19 11:45:04] 2026-02-19 10:45:04,493 [wrapper] ==== wrapper stdout END ====
[2026-02-19 11:45:04] 2026-02-19 10:45:04,498 [wrapper] ==== wrapper stderr END ====
[2026-02-19 11:45:04]  *** Error codes and diagnostics ***
[2026-02-19 11:45:04]     "exeErrorCode": 0,
[2026-02-19 11:45:04]     "exeErrorDiag": "",
[2026-02-19 11:45:04]     "pilotErrorCode": 0,
[2026-02-19 11:45:04]     "pilotErrorDiag": "",
[2026-02-19 11:45:04]  *** Listing of results directory ***
[2026-02-19 11:45:04] insgesamt 934332
[2026-02-19 11:45:04] -rw-r--r-- 1 yeti boinc    584627 Feb 18 22:23 pilot3.tar.gz
[2026-02-19 11:45:04] -rwx------ 1 yeti boinc     36322 Feb 18 22:25 runpilot2-wrapper.sh
[2026-02-19 11:45:04] -rw-r--r-- 1 yeti boinc      5111 Feb 18 22:29 queuedata.json
[2026-02-19 11:45:04] -rw-r--r-- 1 yeti boinc       100 Feb 19 10:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-19 11:45:04] -rwxr-xr-x 1 yeti boinc      7986 Feb 19 10:22 run_atlas
[2026-02-19 11:45:04] -rw-r--r-- 1 yeti boinc       105 Feb 19 10:22 job.xml
[2026-02-19 11:45:04] -rw-r--r-- 2 yeti boinc 674085787 Feb 19 10:22 EVNT.48508760._000748.pool.root.1
[2026-02-19 11:45:04] -rw-r--r-- 2 yeti boinc     15845 Feb 19 10:22 start_atlas.sh
[2026-02-19 11:45:04] drwxrwx--x 2 yeti boinc      4096 Feb 19 10:22 shared
[2026-02-19 11:45:04] -rw-r--r-- 2 yeti boinc    597953 Feb 19 10:22 input.tar.gz
[2026-02-19 11:45:04] -rw-r--r-- 1 yeti boinc      6732 Feb 19 10:22 init_data.xml
[2026-02-19 11:45:04] -rw-r--r-- 1 yeti boinc         0 Feb 19 10:22 boinc_setup_complete
[2026-02-19 11:45:04] -rw-r--r-- 1 yeti boinc         0 Feb 19 10:22 boinc_lockfile
[2026-02-19 11:45:04] -rw-r--r-- 1 yeti boinc      2552 Feb 19 10:22 pandaJob.out
[2026-02-19 11:45:04] -rw------- 1 yeti boinc        52 Feb 19 10:22 setup.sh.local
[2026-02-19 11:45:04] -rw------- 1 yeti boinc   1001083 Feb 19 10:22 agis_schedconf.cvmfs.json
[2026-02-19 11:45:04] -rw------- 1 yeti boinc   1513015 Feb 19 10:22 agis_ddmendpoints.agis.ALL.json
[2026-02-19 11:45:04] -rw------- 1 yeti boinc       425 Feb 19 10:22 workernode_map.json
[2026-02-19 11:45:04] drwx------ 5 yeti boinc      4096 Feb 19 10:22 pilot3
[2026-02-19 11:45:04] -rw-r--r-- 1 yeti boinc       530 Feb 19 11:43 boinc_task_state.xml
[2026-02-19 11:45:04] -rw------- 1 yeti boinc 276658030 Feb 19 11:44 HITS.48508763._038392.pool.root.1
[2026-02-19 11:45:04] -rw------- 1 yeti boinc      1024 Feb 19 11:44 memory_monitor_summary.json
[2026-02-19 11:45:04] -rw------- 1 yeti boinc    303359 Feb 19 11:44 log.48508763._038392.job.log.tgz.1
[2026-02-19 11:45:04] -rw------- 1 yeti boinc      6297 Feb 19 11:44 heartbeat.json
[2026-02-19 11:45:04] -rw-r--r-- 1 yeti boinc        27 Feb 19 11:45 wrapper_checkpoint.txt
[2026-02-19 11:45:04] -rw-r--r-- 1 yeti boinc      8192 Feb 19 11:45 boinc_mmap_file
[2026-02-19 11:45:04] -rw------- 1 yeti boinc       822 Feb 19 11:45 pilotlog.txt
[2026-02-19 11:45:04] -rw------- 1 yeti boinc        95 Feb 19 11:45 pilot_heartbeat.json
[2026-02-19 11:45:04] -rw------- 1 yeti boinc    735884 Feb 19 11:45 log.48508763._038392.job.log.1
[2026-02-19 11:45:04] -rw------- 1 yeti boinc       357 Feb 19 11:45 output.list
[2026-02-19 11:45:04] -rw-r--r-- 1 yeti boinc       620 Feb 19 11:45 runtime_log
[2026-02-19 11:45:04] -rw------- 1 yeti boinc   1054720 Feb 19 11:45 result.tar.gz
[2026-02-19 11:45:04] -rw-r--r-- 1 yeti boinc      9556 Feb 19 11:45 runtime_log.err
[2026-02-19 11:45:04] -rw------- 1 yeti boinc       640 Feb 19 11:45 afhNDmOE4C9n9Rq4apOajLDm4fhM0noT9bVooX4SDmrWvKDmIgTVWo.diag
[2026-02-19 11:45:04] -rw-r--r-- 1 yeti boinc     21353 Feb 19 11:45 stderr.txt
[2026-02-19 11:45:04] HITS file was successfully produced:
[2026-02-19 11:45:04] -rw------- 1 yeti boinc 276658030 Feb 19 11:44 shared/HITS.pool.root.1
[2026-02-19 11:45:04]  *** Contents of shared directory: ***
[2026-02-19 11:45:04] insgesamt 930104
[2026-02-19 11:45:04] -rw-r--r-- 2 yeti boinc 674085787 Feb 19 10:22 ATLAS.root_0
[2026-02-19 11:45:04] -rw-r--r-- 2 yeti boinc     15845 Feb 19 10:22 start_atlas.sh
[2026-02-19 11:45:04] -rw-r--r-- 2 yeti boinc    597953 Feb 19 10:22 input.tar.gz
[2026-02-19 11:45:04] -rw------- 1 yeti boinc 276658030 Feb 19 11:44 HITS.pool.root.1
[2026-02-19 11:45:04] -rw------- 1 yeti boinc   1054720 Feb 19 11:45 result.tar.gz
11:45:06 (4037922): run_atlas exited; CPU time 18673.262271
11:45:06 (4037922): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN