Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:17:16 (1848375): wrapper (7.7.26015): starting
19:17:16 (1848375): wrapper: running run_atlas (--nthreads 4)
[2026-02-19 19:17:16] Arguments: --nthreads 4
[2026-02-19 19:17:16] Threads: 4
[2026-02-19 19:17:16] Checking for CVMFS
[2026-02-19 19:17:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-19 19:17:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-19 19:17:17] Running cvmfs_config stat atlas.cern.ch
[2026-02-19 19:17:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-19 19:17:17] 2.9.2.0 723037 6776 98604 156419 1 50 19757419 36864000 0 130560 0 3196976 99.987 230754 13179 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-19 19:17:17] CVMFS is ok
[2026-02-19 19:17:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-19 19:17:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-19 19:17:17] Further information can be found at the LHC@home message board.
[2026-02-19 19:17:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-19 19:17:17] Checking for apptainer binary...
[2026-02-19 19:17:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-19 19:17:17] Running /usr/bin/apptainer --version
[2026-02-19 19:17:17] apptainer version 1.4.1-1.1
[2026-02-19 19:17:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-19 19:17:17] thA315b
[2026-02-19 19:17:17] apptainer works
[2026-02-19 19:17:17] Set ATHENA_PROC_NUMBER=4
[2026-02-19 19:17:17] Set ATHENA_CORE_NUMBER=4
[2026-02-19 19:17:17] Starting ATLAS job with PandaID=7019797959
[2026-02-19 19:17:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-19 20:51:40]  *** The last 200 lines of the pilot log: ***
[2026-02-19 20:51:40] 2026-02-19 19:50:41,436 | INFO     | [payload] execute_payloads thread has finished
[2026-02-19 20:51:40] 2026-02-19 19:50:41,560 | WARNING  | process 1856991 can no longer be monitored (due to stat problems) - aborting
[2026-02-19 20:51:40] 2026-02-19 19:50:41,591 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-19 20:51:40] 2026-02-19 19:50:41,591 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-19 20:51:40] 2026-02-19 19:50:41,591 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-19 20:51:40] 2026-02-19 19:50:41,591 | WARNING  | maxPSS not found in memory monitor output
[2026-02-19 20:51:40] 2026-02-19 19:50:41,592 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-7019797959/payload.stdout) since it has not been created yet
[2026-02-19 20:51:40] 2026-02-19 19:50:41,592 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-19 20:51:40] 2026-02-19 19:50:41,602 | INFO     | sufficient remaining disk space (335607234560 B)
[2026-02-19 20:51:40] 2026-02-19 19:50:41,602 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-19 20:51:40] 2026-02-19 19:50:41,603 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-7019797959/HITS.48508763._038276.pool.root.1 since it does not exist
[2026-02-19 20:51:40] 2026-02-19 19:50:41,624 | INFO     | all job control threads have been joined
[2026-02-19 20:51:40] 2026-02-19 19:50:41,644 | INFO     | number of running child processes to parent process 1856991: 1
[2026-02-19 20:51:40] 2026-02-19 19:50:41,644 | INFO     | maximum number of monitored processes: 6
[2026-02-19 20:51:40] 2026-02-19 19:50:41,644 | INFO     | aborting job monitoring since job object (job id=7019797959) has expired
[2026-02-19 20:51:40] 2026-02-19 19:50:41,644 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-19 20:51:40] 2026-02-19 19:50:41,644 | INFO     | will abort loop
[2026-02-19 20:51:40] 2026-02-19 19:50:41,691 | INFO     | [payload] control thread has finished
[2026-02-19 20:51:40] 2026-02-19 19:50:41,763 | INFO     | [payload] validate_post thread has finished
[2026-02-19 20:51:40] 2026-02-19 19:50:42,020 | INFO     | [data] control thread has finished
[2026-02-19 20:51:40] 2026-02-19 19:50:42,056 | INFO     | [job] validate thread has finished
[2026-02-19 20:51:40] 2026-02-19 19:50:42,077 | INFO     | [data] copytool_out thread has finished
[2026-02-19 20:51:40] 2026-02-19 19:50:42,097 | INFO     | [payload] failed_post thread has finished
[2026-02-19 20:51:40] 2026-02-19 19:50:42,129 | INFO     | [job] create_data_payload thread has finished
[2026-02-19 20:51:40] 2026-02-19 19:50:42,262 | INFO     | [payload] validate_pre thread has finished
[2026-02-19 20:51:40] 2026-02-19 19:50:42,341 | INFO     | [data] copytool_in thread has finished
[2026-02-19 20:51:40] 2026-02-19 19:50:42,629 | INFO     | [job] control thread has finished
[2026-02-19 20:51:40] 2026-02-19 19:50:42,649 | INFO     | [job] job monitor thread has finished
[2026-02-19 20:51:40] 2026-02-19 19:50:44,079 | INFO     | [data] queue_monitor thread has finished
[2026-02-19 20:51:40] 2026-02-19 19:50:50,633 | INFO     | job.realtimelogging is not enabled
[2026-02-19 20:51:40] 2026-02-19 19:50:51,639 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-19 20:51:40] 2026-02-19 19:51:34,513 | INFO     | [monitor] cgroup control has ended
[2026-02-19 20:51:40] 2026-02-19 19:51:35,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140654987331392)>', '<ExcThread(monitor, started 140654130751232)>']
[2026-02-19 20:51:40] 2026-02-19 19:51:36,361 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-19 20:51:40] 2026-02-19 19:51:36,361 | INFO     | [monitor] control thread has ended
[2026-02-19 20:51:40] 2026-02-19 19:51:40,541 | INFO     | all workflow threads have been joined
[2026-02-19 20:51:40] 2026-02-19 19:51:40,541 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-19 20:51:40] 2026-02-19 19:51:40,541 | INFO     | traces error code: 0
[2026-02-19 20:51:40] 2026-02-19 19:51:40,542 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-19 20:51:40] 2026-02-19 19:51:40,595 [wrapper] ==== pilot stdout END ====
[2026-02-19 20:51:40] 2026-02-19 19:51:40,598 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-19 20:51:40] 2026-02-19 19:51:40,601 [wrapper] pilotpid: 1852479
[2026-02-19 20:51:40] 2026-02-19 19:51:40,603 [wrapper] Pilot exit status: 0
[2026-02-19 20:51:40] 2026-02-19 19:51:40,611 [wrapper] pandaids: 7019797959
[2026-02-19 20:51:40] 2026-02-19 19:51:40,631 [wrapper] cleanup supervisor_pilot 1862359 1852480
[2026-02-19 20:51:40] 2026-02-19 19:51:40,633 [wrapper] Test setup, not cleaning
[2026-02-19 20:51:40] 2026-02-19 19:51:40,636 [wrapper] apfmon messages muted
[2026-02-19 20:51:40] 2026-02-19 19:51:40,639 [wrapper] ==== wrapper stdout END ====
[2026-02-19 20:51:40] 2026-02-19 19:51:40,641 [wrapper] ==== wrapper stderr END ====
[2026-02-19 20:51:40]  *** Error codes and diagnostics ***
[2026-02-19 20:51:40]     "exeErrorCode": 0,
[2026-02-19 20:51:40]     "exeErrorDiag": "",
[2026-02-19 20:51:40]     "pilotErrorCode": 0,
[2026-02-19 20:51:40]     "pilotErrorDiag": "",
[2026-02-19 20:51:40]  *** Listing of results directory ***
[2026-02-19 20:51:40] total 947160
[2026-02-19 20:51:40] -rw-r--r-- 1 boinc boinc    584627 Feb 18 22:23 pilot3.tar.gz
[2026-02-19 20:51:40] -rwx------ 1 boinc boinc     36322 Feb 18 22:25 runpilot2-wrapper.sh
[2026-02-19 20:51:40] -rw-r--r-- 1 boinc boinc      5111 Feb 18 22:29 queuedata.json
[2026-02-19 20:51:40] -rw-r--r-- 1 boinc boinc       100 Feb 19 19:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-19 20:51:40] -rwxr-xr-x 1 boinc boinc      7986 Feb 19 19:17 run_atlas
[2026-02-19 20:51:40] -rw-r--r-- 1 boinc boinc       105 Feb 19 19:17 job.xml
[2026-02-19 20:51:40] -rw-r--r-- 2 boinc boinc 678253928 Feb 19 19:17 EVNT.48508760._000746.pool.root.1
[2026-02-19 20:51:40] -rw-r--r-- 2 boinc boinc    597948 Feb 19 19:17 input.tar.gz
[2026-02-19 20:51:40] -rw-r--r-- 2 boinc boinc     15845 Feb 19 19:17 start_atlas.sh
[2026-02-19 20:51:40] drwxrwx--x 2 boinc boinc      4096 Feb 19 19:17 shared
[2026-02-19 20:51:40] -rw-r--r-- 1 boinc boinc         0 Feb 19 19:17 boinc_setup_complete
[2026-02-19 20:51:40] -rw-r--r-- 1 boinc boinc      6443 Feb 19 19:17 init_data.xml
[2026-02-19 20:51:40] -rw-r--r-- 1 boinc boinc         0 Feb 19 19:17 boinc_lockfile
[2026-02-19 20:51:40] -rw-r--r-- 1 boinc boinc      2552 Feb 19 19:17 pandaJob.out
[2026-02-19 20:51:40] -rw------- 1 boinc boinc   1001567 Feb 19 19:17 agis_schedconf.cvmfs.json
[2026-02-19 20:51:40] -rw------- 1 boinc boinc   1513015 Feb 19 19:17 agis_ddmendpoints.agis.ALL.json
[2026-02-19 20:51:40] -rw------- 1 boinc boinc       416 Feb 19 19:17 workernode_map.json
[2026-02-19 20:51:40] drwx------ 5 boinc boinc      4096 Feb 19 19:17 pilot3
[2026-02-19 20:51:40] -rw------- 1 boinc boinc        95 Feb 19 20:49 pilot_heartbeat.json
[2026-02-19 20:51:40] -rw------- 1 boinc boinc 285502120 Feb 19 20:50 HITS.48508763._038276.pool.root.1
[2026-02-19 20:51:40] -rw-r--r-- 1 boinc boinc       530 Feb 19 20:50 boinc_task_state.xml
[2026-02-19 20:51:40] -rw------- 1 boinc boinc      1015 Feb 19 20:50 memory_monitor_summary.json
[2026-02-19 20:51:40] -rw------- 1 boinc boinc    297422 Feb 19 20:50 log.48508763._038276.job.log.tgz.1
[2026-02-19 20:51:40] -rw------- 1 boinc boinc      6296 Feb 19 20:50 heartbeat.json
[2026-02-19 20:51:40] -rw-r--r-- 1 boinc boinc        27 Feb 19 20:51 wrapper_checkpoint.txt
[2026-02-19 20:51:40] -rw-r--r-- 1 boinc boinc      8192 Feb 19 20:51 boinc_mmap_file
[2026-02-19 20:51:40] -rw------- 1 boinc boinc      6125 Feb 19 20:51 pilotlog.txt
[2026-02-19 20:51:40] -rw------- 1 boinc boinc    814419 Feb 19 20:51 log.48508763._038276.job.log.1
[2026-02-19 20:51:40] -rw------- 1 boinc boinc       357 Feb 19 20:51 output.list
[2026-02-19 20:51:40] -rw-r--r-- 1 boinc boinc       620 Feb 19 20:51 runtime_log
[2026-02-19 20:51:40] -rw------- 1 boinc boinc   1126400 Feb 19 20:51 result.tar.gz
[2026-02-19 20:51:40] -rw-r--r-- 1 boinc boinc      8901 Feb 19 20:51 runtime_log.err
[2026-02-19 20:51:40] -rw------- 1 boinc boinc       658 Feb 19 20:51 p1OKDmAE4C9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmLtwKDmJwoPNo.diag
[2026-02-19 20:51:40] -rw-r--r-- 1 boinc boinc      7733 Feb 19 20:51 stderr.txt
[2026-02-19 20:51:40] HITS file was successfully produced:
[2026-02-19 20:51:40] -rw------- 1 boinc boinc 285502120 Feb 19 20:50 shared/HITS.pool.root.1
[2026-02-19 20:51:40]  *** Contents of shared directory: ***
[2026-02-19 20:51:40] total 942880
[2026-02-19 20:51:40] -rw-r--r-- 2 boinc boinc 678253928 Feb 19 19:17 ATLAS.root_0
[2026-02-19 20:51:40] -rw-r--r-- 2 boinc boinc    597948 Feb 19 19:17 input.tar.gz
[2026-02-19 20:51:40] -rw-r--r-- 2 boinc boinc     15845 Feb 19 19:17 start_atlas.sh
[2026-02-19 20:51:40] -rw------- 1 boinc boinc 285502120 Feb 19 20:50 HITS.pool.root.1
[2026-02-19 20:51:40] -rw------- 1 boinc boinc   1126400 Feb 19 20:51 result.tar.gz
20:51:41 (1848375): run_atlas exited; CPU time 21225.026765
20:51:41 (1848375): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN