Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
11:46:46 (15651): wrapper (7.7.26015): starting
11:46:46 (15651): wrapper: running run_atlas (--nthreads 8)
[2026-02-19 11:46:46] Arguments: --nthreads 8
[2026-02-19 11:46:46] Threads: 8
[2026-02-19 11:46:46] Checking for CVMFS
[2026-02-19 11:46:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-19 11:46:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-19 11:46:46] Running cvmfs_config stat atlas.cern.ch
[2026-02-19 11:46:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-19 11:46:46] 2.11.0.0 4053 187810 97408 156407 1 8 3296061 4096000 63 130560 3 11447082 99.521 12510220 506 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-02-19 11:46:46] CVMFS is ok
[2026-02-19 11:46:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-19 11:46:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-19 11:46:46] Further information can be found at the LHC@home message board.
[2026-02-19 11:46:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-19 11:46:46] Checking for apptainer binary...
[2026-02-19 11:46:46] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-02-19 11:46:46] apptainer is not installed, using version from CVMFS
[2026-02-19 11:46:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-19 11:46:46] WARNING: Environment variable TMPDIR already has value [/tmp/job_11166812/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node309
[2026-02-19 11:46:46] apptainer works
[2026-02-19 11:46:46] Set ATHENA_PROC_NUMBER=8
[2026-02-19 11:46:46] Set ATHENA_CORE_NUMBER=8
[2026-02-19 11:46:46] Starting ATLAS job with PandaID=7017520384
[2026-02-19 11:46:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11166812/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-19 13:03:09]  *** The last 200 lines of the pilot log: ***
[2026-02-19 13:03:09]  is_altstaged=None
[2026-02-19 13:03:09]  is_tar=False
[2026-02-19 13:03:09]  lfn=log.48431096._048820.job.log.tgz.1
[2026-02-19 13:03:09]  mtime=0
[2026-02-19 13:03:09]  protocol_id=None
[2026-02-19 13:03:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-19 13:03:09]  replicas=None
[2026-02-19 13:03:09]  scope=mc23_13p6TeV
[2026-02-19 13:03:09]  status=None
[2026-02-19 13:03:09]  status_code=0
[2026-02-19 13:03:09]  storage_token=
[2026-02-19 13:03:09]  surl=/tmp/job_11166812/atlas/pilot/slots/0/PanDA_Pilot-7017520384/log.48431096._048820.job.log.tgz.1
[2026-02-19 13:03:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/59/log.48431096._048820.job.log.tgz.1
[2026-02-19 13:03:09]  workdir=None
[2026-02-19 13:03:09] ]
[2026-02-19 13:03:09] 2026-02-19 12:01:59,095 | INFO     | transferring file log.48431096._048820.job.log.tgz.1 from /tmp/job_11166812/atlas/pilot/slots/0/PanDA_Pilot-7017520384/log.48431096._048820.job.log.tgz.1 to /tmp/j
[2026-02-19 13:03:09] 2026-02-19 12:01:59,095 | INFO     | executing command: /usr/bin/env mv /tmp/job_11166812/atlas/pilot/slots/0/PanDA_Pilot-7017520384/log.48431096._048820.job.log.tgz.1 /tmp/job_11166812/atlas/pilot/sl
[2026-02-19 13:03:09] 2026-02-19 12:01:59,103 | INFO     | adding to output.list: log.48431096._048820.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/59/log.48431096._048820.job.log.tg
[2026-02-19 13:03:09] 2026-02-19 12:01:59,104 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-19 13:03:09] 2026-02-19 12:01:59,104 | INFO     | summary of transferred files:
[2026-02-19 13:03:09] 2026-02-19 12:01:59,104 | INFO     |  -- lfn=log.48431096._048820.job.log.tgz.1, status_code=0, status=transferred
[2026-02-19 13:03:09] 2026-02-19 12:01:59,104 | INFO     | stage-out finished correctly
[2026-02-19 13:03:09] 2026-02-19 12:01:59,225 | INFO     | PID=29784 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-19 13:03:09] 2026-02-19 12:01:59,225 | INFO     | .. there are 2 such processes running
[2026-02-19 13:03:09] 2026-02-19 12:02:00,226 | INFO     | time since job start (4505s) is within the limit (349056.0s)
[2026-02-19 13:03:09] 2026-02-19 12:02:00,349 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-19 13:03:09] 2026-02-19 12:02:00,885 | WARNING  | process 17502 can no longer be monitored (due to stat problems) - aborting
[2026-02-19 13:03:09] 2026-02-19 12:02:00,885 | INFO     | using path: /tmp/job_11166812/atlas/pilot/slots/0/PanDA_Pilot-7017520384/memory_monitor_summary.json (trf name=prmon)
[2026-02-19 13:03:09] 2026-02-19 12:02:00,971 | INFO     | number of running child processes to parent process 17502: 1
[2026-02-19 13:03:09] 2026-02-19 12:02:00,971 | INFO     | maximum number of monitored processes: 6
[2026-02-19 13:03:09] 2026-02-19 12:02:02,231 | INFO     | time since job start (4507s) is within the limit (349056.0s)
[2026-02-19 13:03:09] 2026-02-19 12:02:03,332 | INFO     | job 7017520384 has state=finished
[2026-02-19 13:03:09] 2026-02-19 12:02:03,332 | INFO     | preparing for final server update for job 7017520384 in state='finished'
[2026-02-19 13:03:09] 2026-02-19 12:02:03,333 | INFO     | reading metadata from: /tmp/job_11166812/atlas/pilot/slots/0/PanDA_Pilot-7017520384/jobReport.json
[2026-02-19 13:03:09] 2026-02-19 12:02:03,334 | INFO     | added worker_node to metadata from /tmp/job_11166812/atlas/pilot/slots/0/workernode_map.json
[2026-02-19 13:03:09] 2026-02-19 12:02:03,334 | INFO     | this job has now completed (state=finished)
[2026-02-19 13:03:09] 2026-02-19 12:02:03,334 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-19 13:03:09] 2026-02-19 12:02:03,334 | INFO     | log transfer has been attempted: DONE
[2026-02-19 13:03:09] 2026-02-19 12:02:03,334 | INFO     | job 7017520384 has finished - writing final server update
[2026-02-19 13:03:09] 2026-02-19 12:02:03,334 | INFO     | total number of processed events: 400 (read)
[2026-02-19 13:03:09] 2026-02-19 12:02:03,351 | INFO     | using path: /tmp/job_11166812/atlas/pilot/slots/0/PanDA_Pilot-7017520384/memory_monitor_summary.json (trf name=prmon)
[2026-02-19 13:03:09] 2026-02-19 12:02:03,352 | INFO     | extracted standard info from prmon json
[2026-02-19 13:03:09] 2026-02-19 12:02:03,352 | INFO     | extracted standard memory fields from prmon json
[2026-02-19 13:03:09] 2026-02-19 12:02:03,352 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-19 13:03:09] 2026-02-19 12:02:03,352 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-19 13:03:09] 2026-02-19 12:02:03,352 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-19 13:03:09] 2026-02-19 12:02:03,353 | INFO     | fitting pss+swap vs Time
[2026-02-19 13:03:09] 2026-02-19 12:02:03,353 | INFO     | sum of square deviations: 93240818.0
[2026-02-19 13:03:09] 2026-02-19 12:02:03,353 | INFO     | sum of deviations: -1660639477.9999998
[2026-02-19 13:03:09] 2026-02-19 12:02:03,353 | INFO     | mean x: 1771500351.0
[2026-02-19 13:03:09] 2026-02-19 12:02:03,353 | INFO     | mean y: 2610936.029850746
[2026-02-19 13:03:09] 2026-02-19 12:02:03,353 | INFO     | intersect: 31553421849.780697
[2026-02-19 13:03:09] 2026-02-19 12:02:03,353 | INFO     | chi2: 0.009018568622990879
[2026-02-19 13:03:09] 2026-02-19 12:02:03,353 | INFO     | current memory leak: -17.81 B/s (using 67 data points, chi2=0.01)
[2026-02-19 13:03:09] 2026-02-19 12:02:03,353 | INFO     | could have reported an average CPU frequency of 2396 MHz (6 samples)
[2026-02-19 13:03:09] 2026-02-19 12:02:03,353 | INFO     | ..............................
[2026-02-19 13:03:09] 2026-02-19 12:02:03,353 | INFO     | . Timing measurements:
[2026-02-19 13:03:09] 2026-02-19 12:02:03,353 | INFO     | . get job = 0 s
[2026-02-19 13:03:09] 2026-02-19 12:02:03,354 | INFO     | . initial setup = 3 s
[2026-02-19 13:03:09] 2026-02-19 12:02:03,354 | INFO     | . payload setup = 3 s
[2026-02-19 13:03:09] 2026-02-19 12:02:03,354 | INFO     | . stage-in = 0 s
[2026-02-19 13:03:09] 2026-02-19 12:02:03,354 | INFO     | . payload execution = 4484 s
[2026-02-19 13:03:09] 2026-02-19 12:02:03,354 | INFO     | . stage-out = 0 s
[2026-02-19 13:03:09] 2026-02-19 12:02:03,354 | INFO     | . log creation = 0 s
[2026-02-19 13:03:09] 2026-02-19 12:02:03,354 | INFO     | ..............................
[2026-02-19 13:03:09] 2026-02-19 12:02:03,401 | INFO     | 
[2026-02-19 13:03:09] 2026-02-19 12:02:03,401 | INFO     | job summary report
[2026-02-19 13:03:09] 2026-02-19 12:02:03,401 | INFO     | --------------------------------------------------
[2026-02-19 13:03:09] 2026-02-19 12:02:03,401 | INFO     | PanDA job id: 7017520384
[2026-02-19 13:03:09] 2026-02-19 12:02:03,401 | INFO     | task id: 48431096
[2026-02-19 13:03:09] 2026-02-19 12:02:03,401 | INFO     | errors: (none)
[2026-02-19 13:03:09] 2026-02-19 12:02:03,401 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-19 13:03:09] 2026-02-19 12:02:03,401 | INFO     | pilot state: finished 
[2026-02-19 13:03:09] 2026-02-19 12:02:03,401 | INFO     | transexitcode: 0
[2026-02-19 13:03:09] 2026-02-19 12:02:03,401 | INFO     | exeerrorcode: 0
[2026-02-19 13:03:09] 2026-02-19 12:02:03,401 | INFO     | exeerrordiag: 
[2026-02-19 13:03:09] 2026-02-19 12:02:03,401 | INFO     | exitcode: 0
[2026-02-19 13:03:09] 2026-02-19 12:02:03,401 | INFO     | exitmsg: OK
[2026-02-19 13:03:09] 2026-02-19 12:02:03,401 | INFO     | cpuconsumptiontime: 29373 s
[2026-02-19 13:03:09] 2026-02-19 12:02:03,401 | INFO     | nevents: 400
[2026-02-19 13:03:09] 2026-02-19 12:02:03,401 | INFO     | neventsw: 0
[2026-02-19 13:03:09] 2026-02-19 12:02:03,401 | INFO     | pid: 17502
[2026-02-19 13:03:09] 2026-02-19 12:02:03,402 | INFO     | pgrp: 17502
[2026-02-19 13:03:09] 2026-02-19 12:02:03,402 | INFO     | corecount: 8
[2026-02-19 13:03:09] 2026-02-19 12:02:03,402 | INFO     | event service: False
[2026-02-19 13:03:09] 2026-02-19 12:02:03,402 | INFO     | sizes: {0: 2282290, 10: 2282290, 4492: 2308591, 4494: 2317619, 4495: 2317675, 4498: 2317869}
[2026-02-19 13:03:09] 2026-02-19 12:02:03,402 | INFO     | --------------------------------------------------
[2026-02-19 13:03:09] 2026-02-19 12:02:03,402 | INFO     | 
[2026-02-19 13:03:09] 2026-02-19 12:02:03,402 | INFO     | executing command: ls -lF /tmp/job_11166812/atlas/pilot/slots/0
[2026-02-19 13:03:09] 2026-02-19 12:02:03,411 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-19 13:03:09] 2026-02-19 12:02:03,411 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-19 13:03:09] 2026-02-19 12:02:03,411 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-19 13:03:09] 2026-02-19 12:02:03,411 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-19 13:03:09] 2026-02-19 12:02:03,411 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-19 13:03:09] 2026-02-19 12:02:03,411 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-19 13:03:09] 2026-02-19 12:02:03,411 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-19 13:03:09] 2026-02-19 12:02:03,411 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-19 13:03:09] 2026-02-19 12:02:03,411 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-19 13:03:09] 2026-02-19 12:02:03,411 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-19 13:03:09] 2026-02-19 12:02:03,411 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-19 13:03:09] 2026-02-19 12:02:03,411 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-19 13:03:09] 2026-02-19 12:02:03,411 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-19 13:03:09] 2026-02-19 12:02:03,411 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-19 13:03:09] 2026-02-19 12:02:03,411 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-19 13:03:09] 2026-02-19 12:02:03,411 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-19 13:03:09] 2026-02-19 12:02:03,411 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-19 13:03:09] 2026-02-19 12:02:03,411 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-19 13:03:09] 2026-02-19 12:02:03,411 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-19 13:03:09] 2026-02-19 12:02:03,411 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-19 13:03:09] 2026-02-19 12:02:03,412 | INFO     | job 7017520384 has completed (purged errors)
[2026-02-19 13:03:09] 2026-02-19 12:02:03,412 | INFO     | overall cleanup function is called
[2026-02-19 13:03:09] 2026-02-19 12:02:04,418 | INFO     | --- collectZombieJob: --- 10, [17502]
[2026-02-19 13:03:09] 2026-02-19 12:02:04,418 | INFO     | zombie collector waiting for pid 17502
[2026-02-19 13:03:09] 2026-02-19 12:02:04,418 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-19 13:03:09] 2026-02-19 12:02:04,418 | INFO     | collected zombie processes
[2026-02-19 13:03:09] 2026-02-19 12:02:04,418 | INFO     | will attempt to kill all subprocesses of pid=17502
[2026-02-19 13:03:09] 2026-02-19 12:02:04,509 | INFO     | process IDs to be killed: [17502] (in reverse order)
[2026-02-19 13:03:09] 2026-02-19 12:02:04,542 | WARNING  | found no corresponding commands to process id(s)
[2026-02-19 13:03:09] 2026-02-19 12:02:04,542 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-19 13:03:09] 2026-02-19 12:02:04,545 | INFO     | did not find any defunct processes belonging to 17502
[2026-02-19 13:03:09] 2026-02-19 12:02:04,548 | INFO     | did not find any defunct processes belonging to 17502
[2026-02-19 13:03:09] 2026-02-19 12:02:04,548 | INFO     | ready for new job
[2026-02-19 13:03:09] 2026-02-19 12:02:04,548 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-19 13:03:09] 2026-02-19 12:02:04,549 | INFO     | **************************************
[2026-02-19 13:03:09] 2026-02-19 12:02:04,549 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-19 13:03:09] 2026-02-19 12:02:04,549 | INFO     | **************************************
[2026-02-19 13:03:09] 2026-02-19 12:02:04,549 | INFO     | 
[2026-02-19 13:03:09] 2026-02-19 12:02:04,562 | INFO     | architecture information:
[2026-02-19 13:03:09] 2026-02-19 12:02:04,562 | INFO     | executing command: cat /etc/os-release
[2026-02-19 13:03:09] 2026-02-19 12:02:04,569 | INFO     | cat /etc/os-release:
[2026-02-19 13:03:09] NAME="CentOS Linux"
[2026-02-19 13:03:09] VERSION="7 (Core)"
[2026-02-19 13:03:09] ID="centos"
[2026-02-19 13:03:09] ID_LIKE="rhel fedora"
[2026-02-19 13:03:09] VERSION_ID="7"
[2026-02-19 13:03:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-19 13:03:09] ANSI_COLOR="0;31"
[2026-02-19 13:03:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-19 13:03:09] HOME_URL="https://www.centos.org/"
[2026-02-19 13:03:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-19 13:03:09] 
[2026-02-19 13:03:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-19 13:03:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-19 13:03:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-19 13:03:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-19 13:03:09] 
[2026-02-19 13:03:09] 2026-02-19 12:02:04,569 | INFO     | **************************************
[2026-02-19 13:03:09] 2026-02-19 12:02:05,071 | INFO     | executing command: df -mP /tmp/job_11166812/atlas/pilot/slots/0
[2026-02-19 13:03:09] 2026-02-19 12:02:05,078 | INFO     | sufficient remaining disk space (224712982528 B)
[2026-02-19 13:03:09] 2026-02-19 12:02:05,078 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-19 13:03:09] 2026-02-19 12:02:05,079 | INFO     | current server update state: UPDATING_FINAL
[2026-02-19 13:03:09] 2026-02-19 12:02:05,079 | INFO     | update_server=False
[2026-02-19 13:03:09] 2026-02-19 12:02:05,079 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-19 13:03:09] 2026-02-19 12:02:05,079 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-19 13:03:09] 2026-02-19 12:02:05,079 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-19 13:03:09] 2026-02-19 12:02:05,079 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-19 13:03:09] 2026-02-19 12:02:05,079 | INFO     | aborting loop
[2026-02-19 13:03:09] 2026-02-19 12:02:05,349 | INFO     | all data control threads have been joined
[2026-02-19 13:03:09] 2026-02-19 12:02:06,017 | INFO     | all payload control threads have been joined
[2026-02-19 13:03:09] 2026-02-19 12:02:06,055 | INFO     | all job control threads have been joined
[2026-02-19 13:03:09] 2026-02-19 12:02:06,079 | INFO     | [job] retrieve thread has finished
[2026-02-19 13:03:09] 2026-02-19 12:02:06,084 | INFO     | [job] queue monitor thread has finished
[2026-02-19 13:03:09] 2026-02-19 12:02:06,084 | INFO     | [job] job monitor thread has finished
[2026-02-19 13:03:09] 2026-02-19 12:02:06,242 | INFO     | [payload] validate_post thread has finished
[2026-02-19 13:03:09] 2026-02-19 12:02:06,353 | INFO     | [data] control thread has finished
[2026-02-19 13:03:09] 2026-02-19 12:02:06,403 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-19 13:03:09] 2026-02-19 12:02:06,693 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-19 13:03:09] 2026-02-19 12:02:06,771 | INFO     | [job] create_data_payload thread has finished
[2026-02-19 13:03:09] 2026-02-19 12:02:06,997 | INFO     | [payload] failed_post thread has finished
[2026-02-19 13:03:09] 2026-02-19 12:02:07,022 | INFO     | [payload] control thread has finished
[2026-02-19 13:03:09] 2026-02-19 12:02:07,060 | INFO     | [job] control thread has finished
[2026-02-19 13:03:09] 2026-02-19 12:02:07,084 | INFO     | [data] copytool_out thread has finished
[2026-02-19 13:03:09] 2026-02-19 12:02:07,179 | INFO     | [payload] validate_pre thread has finished
[2026-02-19 13:03:09] 2026-02-19 12:02:07,193 | INFO     | [payload] execute_payloads thread has finished
[2026-02-19 13:03:09] 2026-02-19 12:02:07,458 | INFO     | [data] copytool_in thread has finished
[2026-02-19 13:03:09] 2026-02-19 12:02:07,462 | INFO     | [job] validate thread has finished
[2026-02-19 13:03:09] 2026-02-19 12:02:10,408 | INFO     | [data] queue_monitor thread has finished
[2026-02-19 13:03:09] 2026-02-19 12:02:35,409 | INFO     | PID=29784 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-19 13:03:09] 2026-02-19 12:02:35,409 | INFO     | .. there are 2 such processes running
[2026-02-19 13:03:09] 2026-02-19 12:02:35,409 | INFO     | found 0 job(s) in 20 queues
[2026-02-19 13:03:09] 2026-02-19 12:02:35,410 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-19 13:03:09] 2026-02-19 12:02:35,410 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-19 13:03:09] 2026-02-19 12:03:02,049 | INFO     | [monitor] cgroup control has ended
[2026-02-19 13:03:09] 2026-02-19 12:03:03,980 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-02-19 13:03:09] 2026-02-19 12:03:04,552 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-19 13:03:09] 2026-02-19 12:03:04,552 | INFO     | [monitor] control thread has ended
[2026-02-19 13:03:09] 2026-02-19 12:03:09,005 | INFO     | all workflow threads have been joined
[2026-02-19 13:03:09] 2026-02-19 12:03:09,005 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-19 13:03:09] 2026-02-19 12:03:09,005 | INFO     | traces error code: 0
[2026-02-19 13:03:09] 2026-02-19 12:03:09,006 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-19 13:03:09] 2026-02-19 12:03:09,061 [wrapper] ==== pilot stdout END ====
[2026-02-19 13:03:09] 2026-02-19 12:03:09,062 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-19 13:03:09] 2026-02-19 12:03:09,064 [wrapper] pilotpid: 29784
[2026-02-19 13:03:09] 2026-02-19 12:03:09,065 [wrapper] Pilot exit status: 0
[2026-02-19 13:03:09] 2026-02-19 12:03:09,069 [wrapper] pandaids: 7017520384
[2026-02-19 13:03:09] 2026-02-19 12:03:09,092 [wrapper] cleanup supervisor_pilot 23406 29786
[2026-02-19 13:03:09] 2026-02-19 12:03:09,093 [wrapper] Test setup, not cleaning
[2026-02-19 13:03:09] 2026-02-19 12:03:09,095 [wrapper] apfmon messages muted
[2026-02-19 13:03:09] 2026-02-19 12:03:09,096 [wrapper] ==== wrapper stdout END ====
[2026-02-19 13:03:09] 2026-02-19 12:03:09,097 [wrapper] ==== wrapper stderr END ====
[2026-02-19 13:03:09]  *** Error codes and diagnostics ***
[2026-02-19 13:03:09]     "exeErrorCode": 0,
[2026-02-19 13:03:09]     "exeErrorDiag": "",
[2026-02-19 13:03:09]     "pilotErrorCode": 0,
[2026-02-19 13:03:09]     "pilotErrorDiag": "",
[2026-02-19 13:03:09]  *** Listing of results directory ***
[2026-02-19 13:03:09] total 937400
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user    584627 Feb 15 09:47 pilot3.tar.gz
[2026-02-19 13:03:09] -rwx------ 1 mf493845 unix-user     36322 Feb 15 09:50 runpilot2-wrapper.sh
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user      5111 Feb 15 09:54 queuedata.json
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user       100 Feb 19 09:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-19 13:03:09] -rwxr-xr-x 1 mf493845 unix-user      7986 Feb 19 09:39 run_atlas
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user       105 Feb 19 09:39 job.xml
[2026-02-19 13:03:09] -rw-r--r-- 2 mf493845 unix-user 675716921 Feb 19 11:46 EVNT.48431094._000411.pool.root.1
[2026-02-19 13:03:09] -rw-r--r-- 2 mf493845 unix-user     15845 Feb 19 11:46 start_atlas.sh
[2026-02-19 13:03:09] drwxrwx--x 2 mf493845 unix-user       100 Feb 19 11:46 shared
[2026-02-19 13:03:09] -rw-r--r-- 2 mf493845 unix-user    597971 Feb 19 11:46 input.tar.gz
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user      6389 Feb 19 11:46 init_data.xml
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user         0 Feb 19 11:46 boinc_setup_complete
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user      8192 Feb 19 11:46 boinc_mmap_file
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user         0 Feb 19 11:46 boinc_lockfile
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user      2556 Feb 19 11:46 pandaJob.out
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user   1001083 Feb 19 11:46 agis_schedconf.cvmfs.json
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user   1513015 Feb 19 11:46 agis_ddmendpoints.agis.ALL.json
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user       420 Feb 19 11:46 workernode_map.json
[2026-02-19 13:03:09] drwx------ 5 mf493845 unix-user       440 Feb 19 11:46 pilot3
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user 278234637 Feb 19 13:01 HITS.48431096._048820.pool.root.1
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user      1016 Feb 19 13:01 memory_monitor_summary.json
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user    332419 Feb 19 13:01 log.48431096._048820.job.log.tgz.1
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user      6315 Feb 19 13:02 heartbeat.json
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user        95 Feb 19 13:02 pilot_heartbeat.json
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user      4831 Feb 19 13:03 pilotlog.txt
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user    688275 Feb 19 13:03 log.48431096._048820.job.log.1
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user       357 Feb 19 13:03 output.list
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user       620 Feb 19 13:03 runtime_log
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user   1034240 Feb 19 13:03 result.tar.gz
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user       643 Feb 19 13:03 SaZNDmA1mB9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmHepKDmrBNXxn.diag
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user      9219 Feb 19 13:03 runtime_log.err
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user     22098 Feb 19 13:03 stderr.txt
[2026-02-19 13:03:09] HITS file was successfully produced:
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user 278234637 Feb 19 13:01 shared/HITS.pool.root.1
[2026-02-19 13:03:09]  *** Contents of shared directory: ***
[2026-02-19 13:03:09] total 933208
[2026-02-19 13:03:09] -rw-r--r-- 2 mf493845 unix-user 675716921 Feb 19 11:46 ATLAS.root_0
[2026-02-19 13:03:09] -rw-r--r-- 2 mf493845 unix-user     15845 Feb 19 11:46 start_atlas.sh
[2026-02-19 13:03:09] -rw-r--r-- 2 mf493845 unix-user    597971 Feb 19 11:46 input.tar.gz
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user 278234637 Feb 19 13:01 HITS.pool.root.1
[2026-02-19 13:03:09] -rw------- 1 mf493845 unix-user   1034240 Feb 19 13:03 result.tar.gz
13:03:10 (15651): run_atlas exited; CPU time 29428.747185
13:03:10 (15651): called boinc_finish(0)

</stderr_txt>
]]>

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