Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:33 (861529): wrapper (7.7.26015): starting
00:01:33 (861529): wrapper: running run_atlas (--nthreads 9)
[2026-02-19 00:01:33] Arguments: --nthreads 9
[2026-02-19 00:01:33] Threads: 9
[2026-02-19 00:01:33] Checking for CVMFS
[2026-02-19 00:01:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-19 00:01:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-19 00:01:35] Running cvmfs_config stat atlas.cern.ch
[2026-02-19 00:01:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-19 00:01:37] 2.13.3.0 9890 151869 337276 156394 3 487 25511539 32935936 31351 16776704 0 726827915 99.722 501688897 33320 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-19 00:01:37] CVMFS is ok
[2026-02-19 00:01:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-19 00:01:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-19 00:01:37] Further information can be found at the LHC@home message board.
[2026-02-19 00:01:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-19 00:01:37] Checking for apptainer binary...
[2026-02-19 00:01:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-19 00:01:37] Running /usr/bin/apptainer --version
[2026-02-19 00:01:38] apptainer version 1.4.5-2.el9
[2026-02-19 00:01:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-19 00:01:39] c-8-36.aglt2.org
[2026-02-19 00:01:39] apptainer works
[2026-02-19 00:01:39] Set ATHENA_PROC_NUMBER=9
[2026-02-19 00:01:39] Set ATHENA_CORE_NUMBER=9
[2026-02-19 00:01:40] Starting ATLAS job with PandaID=7019662792
[2026-02-19 00:01:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-20 10:19:10]  *** The last 200 lines of the pilot log: ***
[2026-02-20 10:19:10] 2026-02-20 15:18:30,551 | INFO     | sum of square deviations: 2551990968503.686
[2026-02-20 10:19:10] 2026-02-20 15:18:30,619 | INFO     | PID=866437 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-20 10:19:10] 2026-02-20 15:18:30,619 | INFO     | .. there are 42 such processes running
[2026-02-20 10:19:10] 2026-02-20 15:18:30,874 | INFO     | monitor loop #6815: job 0:7019662792 is in state 'finished'
[2026-02-20 10:19:10] 2026-02-20 15:18:30,874 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-20 10:19:10] 2026-02-20 15:18:31,635 | INFO     | time since job start (123263s) is within the limit (349056.0s)
[2026-02-20 10:19:10] 2026-02-20 15:18:31,742 | INFO     | sum of deviations: 5505892722755.821
[2026-02-20 10:19:10] 2026-02-20 15:18:31,742 | INFO     | mean x: 1771539126.7508667
[2026-02-20 10:19:10] 2026-02-20 15:18:31,742 | INFO     | mean y: 2579615.532441803
[2026-02-20 10:19:10] 2026-02-20 15:18:31,742 | INFO     | intersect: -3819496757.9485455
[2026-02-20 10:19:10] 2026-02-20 15:18:31,761 | INFO     | chi2: 12.610252552896839
[2026-02-20 10:19:10] 2026-02-20 15:18:31,764 | INFO     | sum of square deviations: 2533078666564.3325
[2026-02-20 10:19:10] 2026-02-20 15:18:32,514 | INFO     | sum of deviations: 5769320695508.44
[2026-02-20 10:19:10] 2026-02-20 15:18:32,515 | INFO     | mean x: 1771538974.2547169
[2026-02-20 10:19:10] 2026-02-20 15:18:32,515 | INFO     | mean y: 2581736.2428003973
[2026-02-20 10:19:10] 2026-02-20 15:18:32,515 | INFO     | intersect: -4032261950.9964566
[2026-02-20 10:19:10] 2026-02-20 15:18:32,552 | INFO     | chi2: 11.115994779470274
[2026-02-20 10:19:10] 2026-02-20 15:18:32,552 | INFO     | current chi2=11.115994779470274 (change=11.849546764892528 %)
[2026-02-20 10:19:10] 2026-02-20 15:18:32,552 | INFO     | right removable region: 2013
[2026-02-20 10:19:10] 2026-02-20 15:18:32,555 | INFO     | sum of square deviations: 2533076633370.8203
[2026-02-20 10:19:10] 2026-02-20 15:18:33,443 | INFO     | sum of deviations: 4864958301928.885
[2026-02-20 10:19:10] 2026-02-20 15:18:33,477 | INFO     | mean x: 1771539279.2552135
[2026-02-20 10:19:10] 2026-02-20 15:18:33,477 | INFO     | mean y: 2584782.558589871
[2026-02-20 10:19:10] 2026-02-20 15:18:33,477 | INFO     | intersect: -3399785524.8635683
[2026-02-20 10:19:10] 2026-02-20 15:18:33,480 | INFO     | chi2: 9.258233864744739
[2026-02-20 10:19:10] 2026-02-20 15:18:33,480 | INFO     | current chi2=9.258233864744739 (change=26.581693539373813 %)
[2026-02-20 10:19:10] 2026-02-20 15:18:33,492 | INFO     | monitor loop #6816: job 0:7019662792 is in state 'finished'
[2026-02-20 10:19:10] 2026-02-20 15:18:33,492 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-20 10:19:10] 2026-02-20 15:18:33,493 | INFO     | sum of square deviations: 2514255974412.875
[2026-02-20 10:19:10] 2026-02-20 15:18:33,728 | INFO     | time since job start (123265s) is within the limit (349056.0s)
[2026-02-20 10:19:10] 2026-02-20 15:18:33,967 | INFO     | sum of deviations: 4307543834315.079
[2026-02-20 10:19:10] 2026-02-20 15:18:33,967 | INFO     | mean x: 1771539431.7595818
[2026-02-20 10:19:10] 2026-02-20 15:18:33,967 | INFO     | mean y: 2589299.0353409657
[2026-02-20 10:19:10] 2026-02-20 15:18:33,968 | INFO     | intersect: -3032496958.760666
[2026-02-20 10:19:10] 2026-02-20 15:18:33,992 | INFO     | chi2: 6.819399065743993
[2026-02-20 10:19:10] 2026-02-20 15:18:33,992 | INFO     | current chi2=6.819399065743993 (change=26.3423330478592 %)
[2026-02-20 10:19:10] 2026-02-20 15:18:33,995 | INFO     | sum of square deviations: 2495528881496.8887
[2026-02-20 10:19:10] 2026-02-20 15:18:34,331 | INFO     | sum of deviations: 3845290730305.206
[2026-02-20 10:19:10] 2026-02-20 15:18:34,331 | INFO     | mean x: 1771539584.263473
[2026-02-20 10:19:10] 2026-02-20 15:18:34,331 | INFO     | mean y: 2593062.9086826346
[2026-02-20 10:19:10] 2026-02-20 15:18:34,331 | INFO     | intersect: -2727122787.0040584
[2026-02-20 10:19:10] 2026-02-20 15:18:34,334 | INFO     | chi2: 5.170307836025128
[2026-02-20 10:19:10] 2026-02-20 15:18:34,334 | INFO     | current chi2=5.170307836025128 (change=24.18235410217851 %)
[2026-02-20 10:19:10] 2026-02-20 15:18:34,334 | INFO     | left removable region: 30
[2026-02-20 10:19:10] 2026-02-20 15:18:34,337 | INFO     | sum of square deviations: 2417892686626.696
[2026-02-20 10:19:10] 2026-02-20 15:18:34,705 | INFO     | sum of deviations: 3325090258542.327
[2026-02-20 10:19:10] 2026-02-20 15:18:34,706 | INFO     | mean x: 1771539858.7796268
[2026-02-20 10:19:10] 2026-02-20 15:18:34,730 | INFO     | mean y: 2601687.4881492686
[2026-02-20 10:19:10] 2026-02-20 15:18:34,730 | INFO     | intersect: -2433623029.8568187
[2026-02-20 10:19:10] 2026-02-20 15:18:34,734 | INFO     | chi2: 2.063090636952908
[2026-02-20 10:19:10] 2026-02-20 15:18:34,734 | INFO     | current memory leak: 1.38 B/s (using 1983 data points, chi2=2.06)
[2026-02-20 10:19:10] 2026-02-20 15:18:34,736 | INFO     | could have reported an average CPU frequency of 2600 MHz (72 samples)
[2026-02-20 10:19:10] 2026-02-20 15:18:34,736 | INFO     | ..............................
[2026-02-20 10:19:10] 2026-02-20 15:18:34,736 | INFO     | . Timing measurements:
[2026-02-20 10:19:10] 2026-02-20 15:18:34,736 | INFO     | . get job = 0 s
[2026-02-20 10:19:10] 2026-02-20 15:18:34,737 | INFO     | . initial setup = 54 s
[2026-02-20 10:19:10] 2026-02-20 15:18:34,737 | INFO     | . payload setup = 64 s
[2026-02-20 10:19:10] 2026-02-20 15:18:34,737 | INFO     | . stage-in = 1 s
[2026-02-20 10:19:10] 2026-02-20 15:18:34,737 | INFO     | . payload execution = 123161 s
[2026-02-20 10:19:10] 2026-02-20 15:18:34,737 | INFO     | . stage-out = 15 s
[2026-02-20 10:19:10] 2026-02-20 15:18:34,737 | INFO     | . log creation = 8 s
[2026-02-20 10:19:10] 2026-02-20 15:18:34,737 | INFO     | ..............................
[2026-02-20 10:19:10] 2026-02-20 15:18:35,247 | INFO     | 
[2026-02-20 10:19:10] 2026-02-20 15:18:35,247 | INFO     | job summary report
[2026-02-20 10:19:10] 2026-02-20 15:18:35,248 | INFO     | --------------------------------------------------
[2026-02-20 10:19:10] 2026-02-20 15:18:35,248 | INFO     | PanDA job id: 7019662792
[2026-02-20 10:19:10] 2026-02-20 15:18:35,248 | INFO     | task id: 48508763
[2026-02-20 10:19:10] 2026-02-20 15:18:35,248 | INFO     | errors: (none)
[2026-02-20 10:19:10] 2026-02-20 15:18:35,248 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-20 10:19:10] 2026-02-20 15:18:35,248 | INFO     | pilot state: finished 
[2026-02-20 10:19:10] 2026-02-20 15:18:35,248 | INFO     | transexitcode: 0
[2026-02-20 10:19:10] 2026-02-20 15:18:35,248 | INFO     | exeerrorcode: 0
[2026-02-20 10:19:10] 2026-02-20 15:18:35,248 | INFO     | exeerrordiag: 
[2026-02-20 10:19:10] 2026-02-20 15:18:35,248 | INFO     | exitcode: 0
[2026-02-20 10:19:10] 2026-02-20 15:18:35,248 | INFO     | exitmsg: OK
[2026-02-20 10:19:10] 2026-02-20 15:18:35,249 | INFO     | cpuconsumptiontime: 75002 s
[2026-02-20 10:19:10] 2026-02-20 15:18:35,249 | INFO     | nevents: 400
[2026-02-20 10:19:10] 2026-02-20 15:18:35,258 | INFO     | neventsw: 0
[2026-02-20 10:19:10] 2026-02-20 15:18:35,258 | INFO     | pid: 876417
[2026-02-20 10:19:10] 2026-02-20 15:18:35,258 | INFO     | pgrp: 876417
[2026-02-20 10:19:10] 2026-02-20 15:18:35,258 | INFO     | corecount: 9
[2026-02-20 10:19:10] 2026-02-20 15:18:35,258 | INFO     | event service: False
[2026-02-20 10:19:10] 2026-02-20 15:18:35,258 | INFO     | sizes: {0: 2281171, 2: 2281856, 3: 2281884, 4: 2281884, 6: 2282317, 7: 2282345, 123231: 2362735, 123249: 2371733, 123253: 2371789, 123260: 2371983}
[2026-02-20 10:19:10] 2026-02-20 15:18:35,258 | INFO     | --------------------------------------------------
[2026-02-20 10:19:10] 2026-02-20 15:18:35,258 | INFO     | 
[2026-02-20 10:19:10] 2026-02-20 15:18:35,259 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-20 10:19:10] 2026-02-20 15:18:35,427 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-20 10:19:10] 2026-02-20 15:18:35,427 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-20 10:19:10] 2026-02-20 15:18:35,427 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-20 10:19:10] 2026-02-20 15:18:35,427 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-20 10:19:10] 2026-02-20 15:18:35,427 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-20 10:19:10] 2026-02-20 15:18:35,428 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-20 10:19:10] 2026-02-20 15:18:35,428 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-20 10:19:10] 2026-02-20 15:18:35,428 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-20 10:19:10] 2026-02-20 15:18:35,428 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-20 10:19:10] 2026-02-20 15:18:35,428 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-20 10:19:10] 2026-02-20 15:18:35,428 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-20 10:19:10] 2026-02-20 15:18:35,428 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-20 10:19:10] 2026-02-20 15:18:35,428 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-20 10:19:10] 2026-02-20 15:18:35,428 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-20 10:19:10] 2026-02-20 15:18:35,429 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-20 10:19:10] 2026-02-20 15:18:35,429 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-20 10:19:10] 2026-02-20 15:18:35,429 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-20 10:19:10] 2026-02-20 15:18:35,429 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-20 10:19:10] 2026-02-20 15:18:35,429 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-20 10:19:10] 2026-02-20 15:18:35,429 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-20 10:19:10] 2026-02-20 15:18:35,429 | INFO     | job 7019662792 has completed (purged errors)
[2026-02-20 10:19:10] 2026-02-20 15:18:35,430 | INFO     | overall cleanup function is called
[2026-02-20 10:19:10] 2026-02-20 15:18:36,516 | INFO     | --- collectZombieJob: --- 10, [876417]
[2026-02-20 10:19:10] 2026-02-20 15:18:36,516 | INFO     | zombie collector waiting for pid 876417
[2026-02-20 10:19:10] 2026-02-20 15:18:36,516 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-20 10:19:10] 2026-02-20 15:18:36,517 | INFO     | collected zombie processes
[2026-02-20 10:19:10] 2026-02-20 15:18:36,517 | INFO     | will attempt to kill all subprocesses of pid=876417
[2026-02-20 10:19:10] 2026-02-20 15:18:38,735 | INFO     | process IDs to be killed: [876417] (in reverse order)
[2026-02-20 10:19:10] 2026-02-20 15:18:39,431 | WARNING  | found no corresponding commands to process id(s)
[2026-02-20 10:19:10] 2026-02-20 15:18:39,431 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-20 10:19:10] 2026-02-20 15:18:39,452 | INFO     | did not find any defunct processes belonging to 876417
[2026-02-20 10:19:10] 2026-02-20 15:18:39,576 | INFO     | did not find any defunct processes belonging to 876417
[2026-02-20 10:19:10] 2026-02-20 15:18:39,576 | INFO     | ready for new job
[2026-02-20 10:19:10] 2026-02-20 15:18:39,577 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-20 10:19:10] 2026-02-20 15:18:39,639 | INFO     | **************************************
[2026-02-20 10:19:10] 2026-02-20 15:18:39,639 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-20 10:19:10] 2026-02-20 15:18:39,640 | INFO     | **************************************
[2026-02-20 10:19:10] 2026-02-20 15:18:39,640 | INFO     | 
[2026-02-20 10:19:10] 2026-02-20 15:18:39,675 | INFO     | architecture information:
[2026-02-20 10:19:10] 2026-02-20 15:18:39,683 | INFO     | executing command: cat /etc/os-release
[2026-02-20 10:19:10] 2026-02-20 15:18:39,908 | INFO     | cat /etc/os-release:
[2026-02-20 10:19:10] NAME="CentOS Linux"
[2026-02-20 10:19:10] VERSION="7 (Core)"
[2026-02-20 10:19:10] ID="centos"
[2026-02-20 10:19:10] ID_LIKE="rhel fedora"
[2026-02-20 10:19:10] VERSION_ID="7"
[2026-02-20 10:19:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-20 10:19:10] ANSI_COLOR="0;31"
[2026-02-20 10:19:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-20 10:19:10] HOME_URL="https://www.centos.org/"
[2026-02-20 10:19:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-20 10:19:10] 
[2026-02-20 10:19:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-20 10:19:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-20 10:19:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-20 10:19:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-20 10:19:10] 
[2026-02-20 10:19:10] 2026-02-20 15:18:39,909 | INFO     | **************************************
[2026-02-20 10:19:10] 2026-02-20 15:18:40,432 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-20 10:19:10] 2026-02-20 15:18:40,688 | INFO     | sufficient remaining disk space (73989619712 B)
[2026-02-20 10:19:10] 2026-02-20 15:18:40,689 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-20 10:19:10] 2026-02-20 15:18:40,689 | INFO     | current server update state: UPDATING_FINAL
[2026-02-20 10:19:10] 2026-02-20 15:18:40,689 | INFO     | update_server=False
[2026-02-20 10:19:10] 2026-02-20 15:18:40,689 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-20 10:19:10] 2026-02-20 15:18:40,690 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-20 10:19:10] 2026-02-20 15:18:40,693 | INFO     | all data control threads have been joined
[2026-02-20 10:19:10] 2026-02-20 15:18:40,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-20 10:19:10] 2026-02-20 15:18:41,087 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-20 10:19:10] 2026-02-20 15:18:41,087 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-20 10:19:10] 2026-02-20 15:18:41,087 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-20 10:19:10] 2026-02-20 15:18:41,088 | INFO     | will abort loop
[2026-02-20 10:19:10] 2026-02-20 15:18:41,341 | INFO     | all payload control threads have been joined
[2026-02-20 10:19:10] 2026-02-20 15:18:41,471 [wrapper] supervise_pilot (15 min periods counter: 138)
[2026-02-20 10:19:10] 2026-02-20 15:18:41,535 | INFO     | all job control threads have been joined
[2026-02-20 10:19:10] 2026-02-20 15:18:41,695 | INFO     | [job] retrieve thread has finished
[2026-02-20 10:19:10] 2026-02-20 15:18:41,699 | INFO     | [data] control thread has finished
[2026-02-20 10:19:10] 2026-02-20 15:18:41,716 | INFO     | [job] queue monitor thread has finished
[2026-02-20 10:19:10] 2026-02-20 15:18:42,093 | INFO     | [job] job monitor thread has finished
[2026-02-20 10:19:10] 2026-02-20 15:18:42,353 | INFO     | [payload] control thread has finished
[2026-02-20 10:19:10] 2026-02-20 15:18:42,387 | INFO     | [payload] validate_post thread has finished
[2026-02-20 10:19:10] 2026-02-20 15:18:42,532 | INFO     | [job] validate thread has finished
[2026-02-20 10:19:10] 2026-02-20 15:18:42,541 | INFO     | [job] control thread has finished
[2026-02-20 10:19:10] 2026-02-20 15:18:42,582 | INFO     | [job] create_data_payload thread has finished
[2026-02-20 10:19:10] 2026-02-20 15:18:42,669 | INFO     | [payload] failed_post thread has finished
[2026-02-20 10:19:10] 2026-02-20 15:18:42,706 | INFO     | [data] copytool_out thread has finished
[2026-02-20 10:19:10] 2026-02-20 15:18:43,037 | INFO     | [payload] execute_payloads thread has finished
[2026-02-20 10:19:10] 2026-02-20 15:18:43,038 | INFO     | [data] copytool_in thread has finished
[2026-02-20 10:19:10] 2026-02-20 15:18:43,038 | INFO     | [payload] validate_pre thread has finished
[2026-02-20 10:19:10] 2026-02-20 15:18:43,109 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-20 10:19:10] 2026-02-20 15:18:43,421 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-20 10:19:10] 2026-02-20 15:18:47,437 | INFO     | [data] queue_monitor thread has finished
[2026-02-20 10:19:10] 2026-02-20 15:18:57,311 | INFO     | [monitor] cgroup control has ended
[2026-02-20 10:19:10] 2026-02-20 15:18:58,089 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140241412433728)>', '<ExcThread(monitor, started 140240438142720)>']
[2026-02-20 10:19:10] 2026-02-20 15:19:03,122 | INFO     | all workflow threads have been joined
[2026-02-20 10:19:10] 2026-02-20 15:19:03,122 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-20 10:19:10] 2026-02-20 15:19:03,122 | INFO     | traces error code: 0
[2026-02-20 10:19:10] 2026-02-20 15:19:03,123 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-20 10:19:10] 2026-02-20 15:19:09,444 | INFO     | PID=866437 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-20 10:19:10] 2026-02-20 15:19:09,444 | INFO     | .. there are 42 such processes running
[2026-02-20 10:19:10] 2026-02-20 15:19:09,444 | INFO     | found 0 job(s) in 20 queues
[2026-02-20 10:19:10] 2026-02-20 15:19:09,444 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-20 10:19:10] 2026-02-20 15:19:09,444 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-20 10:19:10] 2026-02-20 15:19:09,445 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-20 10:19:10] 2026-02-20 15:19:09,445 | INFO     | [monitor] control thread has ended
[2026-02-20 10:19:10] 2026-02-20 15:19:09,592 [wrapper] ==== pilot stdout END ====
[2026-02-20 10:19:10] 2026-02-20 15:19:09,648 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-20 10:19:10] 2026-02-20 15:19:09,695 [wrapper] pilotpid: 866437
[2026-02-20 10:19:10] 2026-02-20 15:19:09,770 [wrapper] Pilot exit status: 0
[2026-02-20 10:19:10] 2026-02-20 15:19:09,840 [wrapper] pandaids: 7019662792
[2026-02-20 10:19:10] 2026-02-20 15:19:10,167 [wrapper] cleanup supervisor_pilot 4045213 866438
[2026-02-20 10:19:10] 2026-02-20 15:19:10,210 [wrapper] Test setup, not cleaning
[2026-02-20 10:19:10] 2026-02-20 15:19:10,246 [wrapper] apfmon messages muted
[2026-02-20 10:19:10] 2026-02-20 15:19:10,277 [wrapper] ==== wrapper stdout END ====
[2026-02-20 10:19:10] 2026-02-20 15:19:10,320 [wrapper] ==== wrapper stderr END ====
[2026-02-20 10:19:10]  *** Error codes and diagnostics ***
[2026-02-20 10:19:10]     "exeErrorCode": 0,
[2026-02-20 10:19:10]     "exeErrorDiag": "",
[2026-02-20 10:19:10]     "pilotErrorCode": 0,
[2026-02-20 10:19:10]     "pilotErrorDiag": "",
[2026-02-20 10:19:10]  *** Listing of results directory ***
[2026-02-20 10:19:10] total 977312
[2026-02-20 10:19:10] -rw-r--r--. 1 boincer umatlas    584627 Feb 18 11:25 pilot3.tar.gz
[2026-02-20 10:19:10] -rwx------. 1 boincer umatlas     36322 Feb 18 11:29 runpilot2-wrapper.sh
[2026-02-20 10:19:10] -rw-r--r--. 1 boincer umatlas      5111 Feb 18 11:36 queuedata.json
[2026-02-20 10:19:10] -rw-r--r--. 1 boincer umatlas       100 Feb 19 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-20 10:19:10] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 19 00:01 run_atlas
[2026-02-20 10:19:10] -rw-r--r--. 1 boincer umatlas       105 Feb 19 00:01 job.xml
[2026-02-20 10:19:10] -rw-r--r--. 2 boincer umatlas 679625487 Feb 19 00:01 EVNT.48508760._000726.pool.root.1
[2026-02-20 10:19:10] -rw-r--r--. 2 boincer umatlas     15845 Feb 19 00:01 start_atlas.sh
[2026-02-20 10:19:10] drwxrwx--x. 2 boincer umatlas      4096 Feb 19 00:01 shared
[2026-02-20 10:19:10] -rw-r--r--. 2 boincer umatlas    597956 Feb 19 00:01 input.tar.gz
[2026-02-20 10:19:10] -rw-r--r--. 1 boincer umatlas         0 Feb 19 00:01 boinc_lockfile
[2026-02-20 10:19:10] -rw-r--r--. 1 boincer umatlas      2552 Feb 19 00:01 pandaJob.out
[2026-02-20 10:19:10] -rw-------. 1 boincer umatlas        57 Feb 19 00:01 setup.sh.local
[2026-02-20 10:19:10] -rw-------. 1 boincer umatlas   1001042 Feb 19 00:03 agis_schedconf.cvmfs.json
[2026-02-20 10:19:10] -rw-------. 1 boincer umatlas       431 Feb 19 00:04 workernode_map.json
[2026-02-20 10:19:10] drwx------. 5 boincer umatlas      4096 Feb 19 00:04 pilot3
[2026-02-20 10:19:10] -rw-r--r--. 1 boincer umatlas      6660 Feb 20 10:09 init_data.xml
[2026-02-20 10:19:10] -rw-------. 1 boincer umatlas 284553861 Feb 20 10:15 HITS.48508763._037204.pool.root.1
[2026-02-20 10:19:10] -rw-r--r--. 1 boincer umatlas       531 Feb 20 10:16 boinc_task_state.xml
[2026-02-20 10:19:10] -rw-------. 1 boincer umatlas      1047 Feb 20 10:18 memory_monitor_summary.json
[2026-02-20 10:19:10] -rw-------. 1 boincer umatlas   1513015 Feb 20 10:18 agis_ddmendpoints.agis.ALL.json
[2026-02-20 10:19:10] -rw-------. 1 boincer umatlas   1793557 Feb 20 10:18 log.48508763._037204.job.log.tgz.1
[2026-02-20 10:19:10] -rw-------. 1 boincer umatlas        95 Feb 20 10:18 pilot_heartbeat.json
[2026-02-20 10:19:10] -rw-------. 1 boincer umatlas      6389 Feb 20 10:18 heartbeat.json
[2026-02-20 10:19:10] -rw-r--r--. 1 boincer umatlas        28 Feb 20 10:19 wrapper_checkpoint.txt
[2026-02-20 10:19:10] -rw-r--r--. 1 boincer umatlas      8192 Feb 20 10:19 boinc_mmap_file
[2026-02-20 10:19:10] -rw-------. 1 boincer umatlas       822 Feb 20 10:19 pilotlog.txt
[2026-02-20 10:19:10] -rw-------. 1 boincer umatlas  14536084 Feb 20 10:19 log.48508763._037204.job.log.1
[2026-02-20 10:19:10] -rw-------. 1 boincer umatlas       357 Feb 20 10:19 output.list
[2026-02-20 10:19:10] -rw-r--r--. 1 boincer umatlas       620 Feb 20 10:19 runtime_log
[2026-02-20 10:19:10] -rw-------. 1 boincer umatlas  16343040 Feb 20 10:19 result.tar.gz
[2026-02-20 10:19:10] -rw-r--r--. 1 boincer umatlas      9333 Feb 20 10:19 runtime_log.err
[2026-02-20 10:19:10] -rw-------. 1 boincer umatlas       657 Feb 20 10:19 aC3KDmDczC9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmGkwKDmEpehEn.diag
[2026-02-20 10:19:10] -rw-r--r--. 1 boincer umatlas     21133 Feb 20 10:19 stderr.txt
[2026-02-20 10:19:11] HITS file was successfully produced:
[2026-02-20 10:19:11] -rw-------. 1 boincer umatlas 284553861 Feb 20 10:15 shared/HITS.pool.root.1
[2026-02-20 10:19:11]  *** Contents of shared directory: ***
[2026-02-20 10:19:11] total 958156
[2026-02-20 10:19:11] -rw-r--r--. 2 boincer umatlas 679625487 Feb 19 00:01 ATLAS.root_0
[2026-02-20 10:19:11] -rw-r--r--. 2 boincer umatlas     15845 Feb 19 00:01 start_atlas.sh
[2026-02-20 10:19:11] -rw-r--r--. 2 boincer umatlas    597956 Feb 19 00:01 input.tar.gz
[2026-02-20 10:19:11] -rw-------. 1 boincer umatlas 284553861 Feb 20 10:15 HITS.pool.root.1
[2026-02-20 10:19:11] -rw-------. 1 boincer umatlas  16343040 Feb 20 10:19 result.tar.gz
10:19:12 (861529): run_atlas exited; CPU time 81810.427123
10:19:12 (861529): called boinc_finish(0)

</stderr_txt>
]]>

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