Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:24 (4083341): wrapper (7.7.26015): starting
00:02:24 (4083341): wrapper: running run_atlas (--nthreads 8)
[2026-02-19 00:02:24] Arguments: --nthreads 8
[2026-02-19 00:02:24] Threads: 8
[2026-02-19 00:02:24] Checking for CVMFS
[2026-02-19 00:02:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-19 00:02:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-19 00:02:26] Running cvmfs_config stat atlas.cern.ch
[2026-02-19 00:02:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-19 00:02:28] 2.13.3.0 9230 151870 317416 156394 0 121 24465932 32503809 26673 16776704 0 790211742 99.732 539426920 33244 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-19 00:02:28] CVMFS is ok
[2026-02-19 00:02:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-19 00:02:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-19 00:02:29] Further information can be found at the LHC@home message board.
[2026-02-19 00:02:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-19 00:02:29] Checking for apptainer binary...
[2026-02-19 00:02:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-19 00:02:29] Running /usr/bin/apptainer --version
[2026-02-19 00:02:29] apptainer version 1.4.5-2.el9
[2026-02-19 00:02:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-19 00:02:31] c-4-35.aglt2.org
[2026-02-19 00:02:31] apptainer works
[2026-02-19 00:02:31] Set ATHENA_PROC_NUMBER=8
[2026-02-19 00:02:31] Set ATHENA_CORE_NUMBER=8
[2026-02-19 00:02:31] Starting ATLAS job with PandaID=7019522379
[2026-02-19 00:02:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-21 14:29:42]  *** The last 200 lines of the pilot log: ***
[2026-02-21 14:29:42] 2026-02-21 19:16:56,943 | INFO     | fitting pss+swap vs Time
[2026-02-21 14:29:42] 2026-02-21 19:16:56,995 | INFO     | sum of square deviations: 15315091354891.283
[2026-02-21 14:29:42] 2026-02-21 19:16:57,361 | INFO     | monitor loop #9889: job 0:7019522379 is in state 'finished'
[2026-02-21 14:29:42] 2026-02-21 19:16:57,361 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-21 14:29:42] 2026-02-21 19:16:57,983 | INFO     | sum of deviations: 6271423085307.721
[2026-02-21 14:29:42] 2026-02-21 19:16:57,983 | INFO     | mean x: 1771589515.4191878
[2026-02-21 14:29:42] 2026-02-21 19:16:57,983 | INFO     | mean y: 2556873.825292995
[2026-02-21 14:29:42] 2026-02-21 19:16:57,983 | INFO     | intersect: -722896675.698629
[2026-02-21 14:29:42] 2026-02-21 19:16:57,988 | INFO     | chi2: 10.885811604349255
[2026-02-21 14:29:42] 2026-02-21 19:16:57,997 | INFO     | sum of square deviations: 15252564028350.39
[2026-02-21 14:29:42] 2026-02-21 19:16:58,185 | INFO     | time since job start (223904s) is within the limit (349056.0s)
[2026-02-21 14:29:42] 2026-02-21 19:16:58,480 | INFO     | sum of deviations: 7458542816081.374
[2026-02-21 14:29:42] 2026-02-21 19:16:58,484 | INFO     | mean x: 1771589362.9197598
[2026-02-21 14:29:42] 2026-02-21 19:16:58,484 | INFO     | mean y: 2559769.123635371
[2026-02-21 14:29:42] 2026-02-21 19:16:58,484 | INFO     | intersect: -863751959.9267116
[2026-02-21 14:29:42] 2026-02-21 19:16:58,489 | INFO     | chi2: 7.418477242878197
[2026-02-21 14:29:42] 2026-02-21 19:16:58,490 | INFO     | current chi2=7.418477242878197 (change=31.851868170176118 %)
[2026-02-21 14:29:42] 2026-02-21 19:16:58,494 | INFO     | sum of square deviations: 15190206899983.383
[2026-02-21 14:29:42] 2026-02-21 19:16:59,535 | INFO     | sum of deviations: 7678173414324.032
[2026-02-21 14:29:42] 2026-02-21 19:16:59,536 | INFO     | mean x: 1771589210.4200602
[2026-02-21 14:29:42] 2026-02-21 19:16:59,536 | INFO     | mean y: 2560305.6154687074
[2026-02-21 14:29:42] 2026-02-21 19:16:59,536 | INFO     | intersect: -892922505.5215863
[2026-02-21 14:29:42] 2026-02-21 19:16:59,617 | INFO     | chi2: 6.715186149718724
[2026-02-21 14:29:42] 2026-02-21 19:16:59,618 | INFO     | current chi2=6.715186149718724 (change=9.48026219039276 %)
[2026-02-21 14:29:42] 2026-02-21 19:16:59,618 | INFO     | right removable region: 3658
[2026-02-21 14:29:42] 2026-02-21 19:16:59,659 | INFO     | sum of square deviations: 15252563313979.217
[2026-02-21 14:29:42] 2026-02-21 19:16:59,950 | INFO     | monitor loop #9890: job 0:7019522379 is in state 'finished'
[2026-02-21 14:29:42] 2026-02-21 19:16:59,950 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-21 14:29:42] 2026-02-21 19:17:00,291 | INFO     | time since job start (223906s) is within the limit (349056.0s)
[2026-02-21 14:29:42] 2026-02-21 19:17:01,631 | INFO     | sum of deviations: 5108443945767.607
[2026-02-21 14:29:42] 2026-02-21 19:17:01,636 | INFO     | mean x: 1771589667.919487
[2026-02-21 14:29:42] 2026-02-21 19:17:01,637 | INFO     | mean y: 2559709.941048035
[2026-02-21 14:29:42] 2026-02-21 19:17:01,637 | INFO     | intersect: -590787541.0861429
[2026-02-21 14:29:42] 2026-02-21 19:17:01,641 | INFO     | chi2: 7.521984150759316
[2026-02-21 14:29:42] 2026-02-21 19:17:01,641 | INFO     | current chi2=7.521984150759316 (change=30.90102581093701 %)
[2026-02-21 14:29:42] 2026-02-21 19:17:01,645 | INFO     | sum of square deviations: 15190205918005.041
[2026-02-21 14:29:42] 2026-02-21 19:17:02,576 | INFO     | monitor loop #9891: job 0:7019522379 is in state 'finished'
[2026-02-21 14:29:42] 2026-02-21 19:17:02,576 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-21 14:29:42] 2026-02-21 19:17:02,966 | INFO     | sum of deviations: 4406774594517.33
[2026-02-21 14:29:42] 2026-02-21 19:17:02,966 | INFO     | mean x: 1771589820.4195135
[2026-02-21 14:29:42] 2026-02-21 19:17:02,966 | INFO     | mean y: 2561425.617381798
[2026-02-21 14:29:42] 2026-02-21 19:17:02,967 | INFO     | intersect: -511387960.89334035
[2026-02-21 14:29:42] 2026-02-21 19:17:02,971 | INFO     | chi2: 6.28137005195238
[2026-02-21 14:29:42] 2026-02-21 19:17:02,972 | INFO     | current chi2=6.28137005195238 (change=16.493176187850654 %)
[2026-02-21 14:29:42] 2026-02-21 19:17:02,972 | INFO     | left removable region: 20
[2026-02-21 14:29:42] 2026-02-21 19:17:02,977 | INFO     | sum of square deviations: 14930162801579.076
[2026-02-21 14:29:42] 2026-02-21 19:17:04,609 | INFO     | sum of deviations: 5005761202904.773
[2026-02-21 14:29:42] 2026-02-21 19:17:04,610 | INFO     | mean x: 1771589789.9189115
[2026-02-21 14:29:42] 2026-02-21 19:17:04,610 | INFO     | mean y: 2566866.6094007697
[2026-02-21 14:29:42] 2026-02-21 19:17:04,610 | INFO     | intersect: -591408936.3135501
[2026-02-21 14:29:42] 2026-02-21 19:17:04,629 | INFO     | chi2: 1.3340271355592035
[2026-02-21 14:29:42] 2026-02-21 19:17:04,629 | INFO     | current memory leak: 0.34 B/s (using 3638 data points, chi2=1.33)
[2026-02-21 14:29:42] 2026-02-21 19:17:04,638 | INFO     | could have reported an average CPU frequency of 2600 MHz (127 samples)
[2026-02-21 14:29:42] 2026-02-21 19:17:04,638 | INFO     | ..............................
[2026-02-21 14:29:42] 2026-02-21 19:17:04,638 | INFO     | . Timing measurements:
[2026-02-21 14:29:42] 2026-02-21 19:17:04,639 | INFO     | . get job = 0 s
[2026-02-21 14:29:42] 2026-02-21 19:17:04,639 | INFO     | . initial setup = 58 s
[2026-02-21 14:29:42] 2026-02-21 19:17:04,639 | INFO     | . payload setup = 70 s
[2026-02-21 14:29:42] 2026-02-21 19:17:04,639 | INFO     | . stage-in = 0 s
[2026-02-21 14:29:42] 2026-02-21 19:17:04,639 | INFO     | . payload execution = 223809 s
[2026-02-21 14:29:42] 2026-02-21 19:17:04,639 | INFO     | . stage-out = 9 s
[2026-02-21 14:29:42] 2026-02-21 19:17:04,639 | INFO     | . log creation = 4 s
[2026-02-21 14:29:42] 2026-02-21 19:17:04,639 | INFO     | ..............................
[2026-02-21 14:29:42] 2026-02-21 19:17:04,787 | INFO     | PID=4105136 has CPU usage=17.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-21 14:29:42] 2026-02-21 19:17:04,787 | INFO     | .. there are 35 such processes running
[2026-02-21 14:29:42] 2026-02-21 19:17:04,968 | INFO     | 
[2026-02-21 14:29:42] 2026-02-21 19:17:04,968 | INFO     | job summary report
[2026-02-21 14:29:42] 2026-02-21 19:17:04,968 | INFO     | --------------------------------------------------
[2026-02-21 14:29:42] 2026-02-21 19:17:04,968 | INFO     | PanDA job id: 7019522379
[2026-02-21 14:29:42] 2026-02-21 19:17:04,969 | INFO     | task id: 48508763
[2026-02-21 14:29:42] 2026-02-21 19:17:04,969 | INFO     | errors: (none)
[2026-02-21 14:29:42] 2026-02-21 19:17:04,969 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-21 14:29:42] 2026-02-21 19:17:04,969 | INFO     | pilot state: finished 
[2026-02-21 14:29:42] 2026-02-21 19:17:04,969 | INFO     | transexitcode: 0
[2026-02-21 14:29:42] 2026-02-21 19:17:04,969 | INFO     | exeerrorcode: 0
[2026-02-21 14:29:42] 2026-02-21 19:17:04,969 | INFO     | exeerrordiag: 
[2026-02-21 14:29:42] 2026-02-21 19:17:04,969 | INFO     | exitcode: 0
[2026-02-21 14:29:42] 2026-02-21 19:17:04,969 | INFO     | exitmsg: OK
[2026-02-21 14:29:42] 2026-02-21 19:17:04,969 | INFO     | cpuconsumptiontime: 74781 s
[2026-02-21 14:29:42] 2026-02-21 19:17:04,970 | INFO     | nevents: 400
[2026-02-21 14:29:42] 2026-02-21 19:17:04,970 | INFO     | neventsw: 0
[2026-02-21 14:29:42] 2026-02-21 19:17:04,970 | INFO     | pid: 4149550
[2026-02-21 14:29:42] 2026-02-21 19:17:04,970 | INFO     | pgrp: 4149550
[2026-02-21 14:29:42] 2026-02-21 19:17:04,970 | INFO     | corecount: 8
[2026-02-21 14:29:42] 2026-02-21 19:17:04,970 | INFO     | event service: False
[2026-02-21 14:29:42] 2026-02-21 19:17:04,970 | INFO     | sizes: {0: 2281173, 1: 2281858, 2: 2282319, 223884: 2400744, 223885: 2400743, 223895: 2409797, 223898: 2409981, 223908: 2410175}
[2026-02-21 14:29:42] 2026-02-21 19:17:04,970 | INFO     | --------------------------------------------------
[2026-02-21 14:29:42] 2026-02-21 19:17:04,970 | INFO     | 
[2026-02-21 14:29:42] 2026-02-21 19:17:04,971 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-02-21 14:29:42] 2026-02-21 19:17:05,118 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-21 14:29:42] 2026-02-21 19:17:05,119 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-21 14:29:42] 2026-02-21 19:17:05,119 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-21 14:29:42] 2026-02-21 19:17:05,119 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-21 14:29:42] 2026-02-21 19:17:05,119 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-21 14:29:42] 2026-02-21 19:17:05,119 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-21 14:29:42] 2026-02-21 19:17:05,119 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-21 14:29:42] 2026-02-21 19:17:05,119 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-21 14:29:42] 2026-02-21 19:17:05,120 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-21 14:29:42] 2026-02-21 19:17:05,120 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-21 14:29:42] 2026-02-21 19:17:05,120 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-21 14:29:42] 2026-02-21 19:17:05,120 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-21 14:29:42] 2026-02-21 19:17:05,120 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-21 14:29:42] 2026-02-21 19:17:05,120 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-21 14:29:42] 2026-02-21 19:17:05,120 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-21 14:29:42] 2026-02-21 19:17:05,120 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-21 14:29:42] 2026-02-21 19:17:05,120 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-21 14:29:42] 2026-02-21 19:17:05,120 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-21 14:29:42] 2026-02-21 19:17:05,121 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-21 14:29:42] 2026-02-21 19:17:05,121 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-21 14:29:42] 2026-02-21 19:17:05,121 | INFO     | job 7019522379 has completed (purged errors)
[2026-02-21 14:29:42] 2026-02-21 19:17:05,121 | INFO     | overall cleanup function is called
[2026-02-21 14:29:42] 2026-02-21 19:17:06,161 | INFO     | --- collectZombieJob: --- 10, [4149550]
[2026-02-21 14:29:42] 2026-02-21 19:17:06,179 | INFO     | zombie collector waiting for pid 4149550
[2026-02-21 14:29:42] 2026-02-21 19:17:06,180 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-21 14:29:42] 2026-02-21 19:17:06,180 | INFO     | collected zombie processes
[2026-02-21 14:29:42] 2026-02-21 19:17:06,180 | INFO     | will attempt to kill all subprocesses of pid=4149550
[2026-02-21 14:29:42] 2026-02-21 19:17:07,029 | INFO     | process IDs to be killed: [4149550] (in reverse order)
[2026-02-21 14:29:42] 2026-02-21 19:17:07,346 | WARNING  | found no corresponding commands to process id(s)
[2026-02-21 14:29:42] 2026-02-21 19:17:07,346 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-21 14:29:42] 2026-02-21 19:17:07,364 | INFO     | did not find any defunct processes belonging to 4149550
[2026-02-21 14:29:42] 2026-02-21 19:17:07,379 | INFO     | did not find any defunct processes belonging to 4149550
[2026-02-21 14:29:42] 2026-02-21 19:17:07,380 | INFO     | ready for new job
[2026-02-21 14:29:42] 2026-02-21 19:17:07,380 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-21 14:29:42] 2026-02-21 19:17:07,390 | INFO     | **************************************
[2026-02-21 14:29:42] 2026-02-21 19:17:07,390 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-21 14:29:42] 2026-02-21 19:17:07,390 | INFO     | **************************************
[2026-02-21 14:29:42] 2026-02-21 19:17:07,391 | INFO     | 
[2026-02-21 14:29:42] 2026-02-21 19:17:07,393 | INFO     | architecture information:
[2026-02-21 14:29:42] 2026-02-21 19:17:07,393 | INFO     | executing command: cat /etc/os-release
[2026-02-21 14:29:42] 2026-02-21 19:17:07,505 | INFO     | cat /etc/os-release:
[2026-02-21 14:29:42] NAME="CentOS Linux"
[2026-02-21 14:29:42] VERSION="7 (Core)"
[2026-02-21 14:29:42] ID="centos"
[2026-02-21 14:29:42] ID_LIKE="rhel fedora"
[2026-02-21 14:29:42] VERSION_ID="7"
[2026-02-21 14:29:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-21 14:29:42] ANSI_COLOR="0;31"
[2026-02-21 14:29:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-21 14:29:42] HOME_URL="https://www.centos.org/"
[2026-02-21 14:29:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-21 14:29:42] 
[2026-02-21 14:29:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-21 14:29:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-21 14:29:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-21 14:29:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-21 14:29:42] 
[2026-02-21 14:29:42] 2026-02-21 19:17:07,506 | INFO     | **************************************
[2026-02-21 14:29:42] 2026-02-21 19:17:08,009 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-02-21 14:29:42] 2026-02-21 19:17:08,175 | INFO     | sufficient remaining disk space (88967479296 B)
[2026-02-21 14:29:42] 2026-02-21 19:17:08,176 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-21 14:29:42] 2026-02-21 19:17:08,176 | INFO     | current server update state: UPDATING_FINAL
[2026-02-21 14:29:42] 2026-02-21 19:17:08,176 | INFO     | update_server=False
[2026-02-21 14:29:42] 2026-02-21 19:17:08,176 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-21 14:29:42] 2026-02-21 19:17:08,436 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-21 14:29:42] 2026-02-21 19:17:08,607 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-21 14:29:42] 2026-02-21 19:17:08,611 | INFO     | aborting loop
[2026-02-21 14:29:42] 2026-02-21 19:17:08,791 | INFO     | all data control threads have been joined
[2026-02-21 14:29:42] 2026-02-21 19:17:09,182 | INFO     | [job] retrieve thread has finished
[2026-02-21 14:29:42] 2026-02-21 19:17:09,243 | INFO     | [payload] validate_pre thread has finished
[2026-02-21 14:29:42] 2026-02-21 19:17:09,267 | INFO     | [payload] failed_post thread has finished
[2026-02-21 14:29:42] 2026-02-21 19:17:09,310 | INFO     | [job] validate thread has finished
[2026-02-21 14:29:42] 2026-02-21 19:17:09,494 | INFO     | all job control threads have been joined
[2026-02-21 14:29:42] 2026-02-21 19:17:09,617 | INFO     | [job] job monitor thread has finished
[2026-02-21 14:29:42] 2026-02-21 19:17:09,639 | INFO     | all payload control threads have been joined
[2026-02-21 14:29:42] 2026-02-21 19:17:09,742 | INFO     | [payload] validate_post thread has finished
[2026-02-21 14:29:42] 2026-02-21 19:17:09,801 | INFO     | [data] control thread has finished
[2026-02-21 14:29:42] 2026-02-21 19:17:09,917 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-21 14:29:42] 2026-02-21 19:17:10,044 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-21 14:29:42] 2026-02-21 19:17:10,287 | INFO     | [data] copytool_in thread has finished
[2026-02-21 14:29:42] 2026-02-21 19:17:10,428 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-21 14:29:42] 2026-02-21 19:17:10,443 | INFO     | [data] copytool_out thread has finished
[2026-02-21 14:29:42] 2026-02-21 19:17:10,451 | INFO     | [job] create_data_payload thread has finished
[2026-02-21 14:29:42] 2026-02-21 19:17:10,453 | INFO     | [payload] execute_payloads thread has finished
[2026-02-21 14:29:42] 2026-02-21 19:17:10,500 | INFO     | [job] control thread has finished
[2026-02-21 14:29:42] 2026-02-21 19:17:10,645 | INFO     | [payload] control thread has finished
[2026-02-21 14:29:42] 2026-02-21 19:17:10,923 | INFO     | [job] queue monitor thread has finished
[2026-02-21 14:29:42] 2026-02-21 19:17:14,072 | INFO     | [data] queue_monitor thread has finished
[2026-02-21 14:29:42] 2026-02-21 19:17:38,016 | INFO     | [monitor] cgroup control has ended
[2026-02-21 14:29:42] 2026-02-21 19:17:39,954 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140102397785920)>', '<ExcThread(monitor, started 140101589903104)>']
[2026-02-21 14:29:42] 2026-02-21 19:17:41,452 | INFO     | PID=4105136 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-21 14:29:42] 2026-02-21 19:17:41,452 | INFO     | .. there are 36 such processes running
[2026-02-21 14:29:42] 2026-02-21 19:17:41,477 | INFO     | found 0 job(s) in 20 queues
[2026-02-21 14:29:42] 2026-02-21 19:17:41,477 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-21 14:29:42] 2026-02-21 19:17:41,477 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-21 14:29:42] 2026-02-21 19:17:41,477 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-21 14:29:42] 2026-02-21 19:17:41,477 | INFO     | [monitor] control thread has ended
[2026-02-21 14:29:42] 2026-02-21 19:17:44,980 | INFO     | all workflow threads have been joined
[2026-02-21 14:29:42] 2026-02-21 19:17:44,980 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-21 14:29:42] 2026-02-21 19:17:44,980 | INFO     | traces error code: 0
[2026-02-21 14:29:42] 2026-02-21 19:17:44,981 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-21 14:29:42] 2026-02-21 19:17:45,863 [wrapper] ==== pilot stdout END ====
[2026-02-21 14:29:42] 2026-02-21 19:17:45,894 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-21 14:29:42] 2026-02-21 19:17:45,941 [wrapper] pilotpid: 4105136
[2026-02-21 14:29:42] 2026-02-21 19:17:45,962 [wrapper] Pilot exit status: 0
[2026-02-21 14:29:42] 2026-02-21 19:17:46,124 [wrapper] pandaids: 7019522379
[2026-02-21 14:29:42] 2026-02-21 19:17:46,905 [wrapper] cleanup supervisor_pilot 2354237 4105137
[2026-02-21 14:29:42] 2026-02-21 19:17:46,940 [wrapper] Test setup, not cleaning
[2026-02-21 14:29:42] 2026-02-21 19:17:46,996 [wrapper] apfmon messages muted
[2026-02-21 14:29:42] 2026-02-21 19:17:47,101 [wrapper] ==== wrapper stdout END ====
[2026-02-21 14:29:42] 2026-02-21 19:17:47,137 [wrapper] ==== wrapper stderr END ====
[2026-02-21 14:29:42]  *** Error codes and diagnostics ***
[2026-02-21 14:29:42]     "exeErrorCode": 0,
[2026-02-21 14:29:42]     "exeErrorDiag": "",
[2026-02-21 14:29:42]     "pilotErrorCode": 0,
[2026-02-21 14:29:42]     "pilotErrorDiag": "",
[2026-02-21 14:29:42]  *** Listing of results directory ***
[2026-02-21 14:29:42] total 993552
[2026-02-21 14:29:42] -rw-r--r--. 1 boincer umatlas    584627 Feb 18 11:25 pilot3.tar.gz
[2026-02-21 14:29:42] -rwx------. 1 boincer umatlas     36322 Feb 18 11:28 runpilot2-wrapper.sh
[2026-02-21 14:29:42] -rw-r--r--. 1 boincer umatlas      5111 Feb 18 11:33 queuedata.json
[2026-02-21 14:29:42] -rw-r--r--. 1 boincer umatlas       100 Feb 19 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-21 14:29:42] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 19 00:02 run_atlas
[2026-02-21 14:29:42] -rw-r--r--. 1 boincer umatlas       105 Feb 19 00:02 job.xml
[2026-02-21 14:29:42] -rw-r--r--. 2 boincer umatlas 682585087 Feb 19 00:02 EVNT.48508760._000677.pool.root.1
[2026-02-21 14:29:42] -rw-r--r--. 2 boincer umatlas     15845 Feb 19 00:02 start_atlas.sh
[2026-02-21 14:29:42] drwxrwx--x. 2 boincer umatlas      4096 Feb 19 00:02 shared
[2026-02-21 14:29:42] -rw-r--r--. 2 boincer umatlas    597955 Feb 19 00:02 input.tar.gz
[2026-02-21 14:29:42] -rw-r--r--. 1 boincer umatlas         0 Feb 19 00:02 boinc_lockfile
[2026-02-21 14:29:42] -rw-r--r--. 1 boincer umatlas      2553 Feb 19 00:02 pandaJob.out
[2026-02-21 14:29:42] -rw-------. 1 boincer umatlas        57 Feb 19 00:02 setup.sh.local
[2026-02-21 14:29:42] -rw-------. 1 boincer umatlas   1001042 Feb 19 00:04 agis_schedconf.cvmfs.json
[2026-02-21 14:29:42] -rw-------. 1 boincer umatlas       438 Feb 19 00:05 workernode_map.json
[2026-02-21 14:29:42] drwx------. 5 boincer umatlas      4096 Feb 19 00:05 pilot3
[2026-02-21 14:29:42] -rw-------. 1 boincer umatlas 279898854 Feb 21 14:10 HITS.48508763._034707.pool.root.1
[2026-02-21 14:29:42] -rw-r--r--. 1 boincer umatlas       531 Feb 21 14:10 boinc_task_state.xml
[2026-02-21 14:29:42] -rw-------. 1 boincer umatlas      1056 Feb 21 14:16 memory_monitor_summary.json
[2026-02-21 14:29:42] -rw-------. 1 boincer umatlas   1513015 Feb 21 14:16 agis_ddmendpoints.agis.ALL.json
[2026-02-21 14:29:42] -rw-------. 1 boincer umatlas   2726905 Feb 21 14:16 log.48508763._034707.job.log.tgz.1
[2026-02-21 14:29:42] -rw-------. 1 boincer umatlas      6416 Feb 21 14:17 heartbeat.json
[2026-02-21 14:29:42] -rw-------. 1 boincer umatlas        95 Feb 21 14:17 pilot_heartbeat.json
[2026-02-21 14:29:42] -rw-------. 1 boincer umatlas      4820 Feb 21 14:17 pilotlog.txt
[2026-02-21 14:29:42] -rw-------. 1 boincer umatlas  22761305 Feb 21 14:17 log.48508763._034707.job.log.1
[2026-02-21 14:29:42] -rw-------. 1 boincer umatlas       357 Feb 21 14:17 output.list
[2026-02-21 14:29:42] -rw-r--r--. 1 boincer umatlas       620 Feb 21 14:17 runtime_log
[2026-02-21 14:29:42] -rw-------. 1 boincer umatlas  25507840 Feb 21 14:17 result.tar.gz
[2026-02-21 14:29:42] -rw-r--r--. 1 boincer umatlas      9333 Feb 21 14:17 runtime_log.err
[2026-02-21 14:29:42] -rw-------. 1 boincer umatlas       663 Feb 21 14:17 5bbNDmiazC9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmmbwKDmMPRNun.diag
[2026-02-21 14:29:42] -rw-r--r--. 1 boincer umatlas      6659 Feb 21 14:20 init_data.xml
[2026-02-21 14:29:42] -rw-r--r--. 1 boincer umatlas        27 Feb 21 14:29 wrapper_checkpoint.txt
[2026-02-21 14:29:42] -rw-r--r--. 1 boincer umatlas      8192 Feb 21 14:29 boinc_mmap_file
[2026-02-21 14:29:42] -rw-r--r--. 1 boincer umatlas     21374 Feb 21 14:29 stderr.txt
[2026-02-21 14:29:42] HITS file was successfully produced:
[2026-02-21 14:29:42] -rw-------. 1 boincer umatlas 279898854 Feb 21 14:10 shared/HITS.pool.root.1
[2026-02-21 14:29:42]  *** Contents of shared directory: ***
[2026-02-21 14:29:42] total 965448
[2026-02-21 14:29:42] -rw-r--r--. 2 boincer umatlas 682585087 Feb 19 00:02 ATLAS.root_0
[2026-02-21 14:29:42] -rw-r--r--. 2 boincer umatlas     15845 Feb 19 00:02 start_atlas.sh
[2026-02-21 14:29:42] -rw-r--r--. 2 boincer umatlas    597955 Feb 19 00:02 input.tar.gz
[2026-02-21 14:29:42] -rw-------. 1 boincer umatlas 279898854 Feb 21 14:10 HITS.pool.root.1
[2026-02-21 14:29:42] -rw-------. 1 boincer umatlas  25507840 Feb 21 14:17 result.tar.gz
14:29:44 (4083341): run_atlas exited; CPU time 85562.633400
14:29:44 (4083341): called boinc_finish(0)

</stderr_txt>
]]>

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