Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:41:04 (421467): wrapper (7.7.26015): starting
23:41:04 (421467): wrapper: running run_atlas (--nthreads 8)
[2026-02-18 23:41:04] Arguments: --nthreads 8
[2026-02-18 23:41:04] Threads: 8
[2026-02-18 23:41:04] Checking for CVMFS
[2026-02-18 23:41:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-18 23:41:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-18 23:41:05] Running cvmfs_config stat atlas.cern.ch
[2026-02-18 23:41:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-18 23:41:06] 2.13.3.0 2348513 20681 379696 156394 1 86 26440154 40960000 58602 16776704 1 126335842 99.770 74958620 16620 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-18 23:41:06] CVMFS is ok
[2026-02-18 23:41:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-18 23:41:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-18 23:41:06] Further information can be found at the LHC@home message board.
[2026-02-18 23:41:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-18 23:41:06] Checking for apptainer binary...
[2026-02-18 23:41:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-18 23:41:06] Running /usr/bin/apptainer --version
[2026-02-18 23:41:07] apptainer version 1.4.5-2.el9
[2026-02-18 23:41:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-18 23:41:07] lc-12-9.aglt2.org
[2026-02-18 23:41:07] apptainer works
[2026-02-18 23:41:07] Set ATHENA_PROC_NUMBER=8
[2026-02-18 23:41:07] Set ATHENA_CORE_NUMBER=8
[2026-02-18 23:41:08] Starting ATLAS job with PandaID=7019645090
[2026-02-18 23:41:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-19 08:18:25]  *** The last 200 lines of the pilot log: ***
[2026-02-19 08:18:25] 2026-02-19 13:17:40,455 | INFO     | monitor loop #1450: job 0:7019645090 is in state 'finished'
[2026-02-19 08:18:25] 2026-02-19 13:17:40,455 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-19 08:18:25] 2026-02-19 13:17:40,602 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7019645090/memory_monitor_summary.json (trf name=prmon)
[2026-02-19 08:18:25] 2026-02-19 13:17:40,702 | INFO     | extracted standard info from prmon json
[2026-02-19 08:18:25] 2026-02-19 13:17:40,702 | INFO     | extracted standard memory fields from prmon json
[2026-02-19 08:18:25] 2026-02-19 13:17:40,702 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-19 08:18:25] 2026-02-19 13:17:40,702 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-19 08:18:25] 2026-02-19 13:17:40,702 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-19 08:18:25] 2026-02-19 13:17:40,768 | INFO     | fitting pss+swap vs Time
[2026-02-19 08:18:25] 2026-02-19 13:17:40,769 | INFO     | sum of square deviations: 39934629949.75443
[2026-02-19 08:18:25] 2026-02-19 13:17:40,798 | INFO     | sum of deviations: 86418323967.0653
[2026-02-19 08:18:25] 2026-02-19 13:17:40,798 | INFO     | mean x: 1771491667.370297
[2026-02-19 08:18:25] 2026-02-19 13:17:40,798 | INFO     | mean y: 2545471.7643564357
[2026-02-19 08:18:25] 2026-02-19 13:17:40,821 | INFO     | intersect: -3830952948.2380147
[2026-02-19 08:18:25] 2026-02-19 13:17:40,822 | INFO     | chi2: 4.380773629480736
[2026-02-19 08:18:25] 2026-02-19 13:17:40,823 | INFO     | sum of square deviations: 38760209149.06212
[2026-02-19 08:18:25] 2026-02-19 13:17:40,850 | INFO     | sum of deviations: 153082492709.51013
[2026-02-19 08:18:25] 2026-02-19 13:17:40,850 | INFO     | mean x: 1771491514.874
[2026-02-19 08:18:25] 2026-02-19 13:17:40,850 | INFO     | mean y: 2554075.77
[2026-02-19 08:18:25] 2026-02-19 13:17:40,868 | INFO     | intersect: -6993908091.597329
[2026-02-19 08:18:25] 2026-02-19 13:17:40,868 | INFO     | chi2: 2.881413226805132
[2026-02-19 08:18:25] 2026-02-19 13:17:40,869 | INFO     | current chi2=2.881413226805132 (change=34.225927415777626 %)
[2026-02-19 08:18:25] 2026-02-19 13:17:40,869 | INFO     | sum of square deviations: 37609044598.3556
[2026-02-19 08:18:25] 2026-02-19 13:17:40,898 | INFO     | sum of deviations: 150896805744.20007
[2026-02-19 08:18:25] 2026-02-19 13:17:40,898 | INFO     | mean x: 1771491362.3777778
[2026-02-19 08:18:25] 2026-02-19 13:17:40,898 | INFO     | mean y: 2553786.2181818183
[2026-02-19 08:18:25] 2026-02-19 13:17:40,898 | INFO     | intersect: -7105108501.962777
[2026-02-19 08:18:25] 2026-02-19 13:17:40,920 | INFO     | chi2: 2.882019145271652
[2026-02-19 08:18:25] 2026-02-19 13:17:40,921 | INFO     | current chi2=2.882019145271652 (change=-0.02102851687094511 %)
[2026-02-19 08:18:25] 2026-02-19 13:17:40,921 | INFO     | right removable region: 494
[2026-02-19 08:18:25] 2026-02-19 13:17:40,921 | INFO     | sum of square deviations: 38760095079.062126
[2026-02-19 08:18:25] 2026-02-19 13:17:40,948 | INFO     | sum of deviations: -47044236590.804
[2026-02-19 08:18:25] 2026-02-19 13:17:40,995 | INFO     | mean x: 1771491819.874
[2026-02-19 08:18:25] 2026-02-19 13:17:40,995 | INFO     | mean y: 2562771.892
[2026-02-19 08:18:25] 2026-02-19 13:17:40,995 | INFO     | intersect: 2152673088.258204
[2026-02-19 08:18:25] 2026-02-19 13:17:40,996 | INFO     | chi2: 1.8124685728088012
[2026-02-19 08:18:25] 2026-02-19 13:17:40,996 | INFO     | current chi2=1.8124685728088012 (change=58.62674664101195 %)
[2026-02-19 08:18:25] 2026-02-19 13:17:40,997 | INFO     | sum of square deviations: 37608846958.1091
[2026-02-19 08:18:25] 2026-02-19 13:17:41,024 | INFO     | sum of deviations: -70737051168.09697
[2026-02-19 08:18:25] 2026-02-19 13:17:41,071 | INFO     | mean x: 1771491972.3757577
[2026-02-19 08:18:25] 2026-02-19 13:17:41,071 | INFO     | mean y: 2565903.591919192
[2026-02-19 08:18:25] 2026-02-19 13:17:41,071 | INFO     | intersect: 3334497840.601172
[2026-02-19 08:18:25] 2026-02-19 13:17:41,072 | INFO     | chi2: 1.722710463056333
[2026-02-19 08:18:25] 2026-02-19 13:17:41,168 | INFO     | current chi2=1.722710463056333 (change=4.952257440434907 %)
[2026-02-19 08:18:25] 2026-02-19 13:17:41,168 | INFO     | left removable region: 20
[2026-02-19 08:18:25] 2026-02-19 13:17:41,168 | INFO     | sum of square deviations: 33022496227.073837
[2026-02-19 08:18:25] 2026-02-19 13:17:41,197 | INFO     | sum of deviations: 26228094192.67931
[2026-02-19 08:18:25] 2026-02-19 13:17:41,197 | INFO     | mean x: 1771491941.8881857
[2026-02-19 08:18:25] 2026-02-19 13:17:41,197 | INFO     | mean y: 2570363.371308017
[2026-02-19 08:18:25] 2026-02-19 13:17:41,197 | INFO     | intersect: -1404435854.2665536
[2026-02-19 08:18:25] 2026-02-19 13:17:41,198 | INFO     | chi2: 0.09067372907079653
[2026-02-19 08:18:25] 2026-02-19 13:17:41,198 | INFO     | current memory leak: 0.79 B/s (using 474 data points, chi2=0.09)
[2026-02-19 08:18:25] 2026-02-19 13:17:41,222 | INFO     | could have reported an average CPU frequency of 2705 MHz (21 samples)
[2026-02-19 08:18:25] 2026-02-19 13:17:41,222 | INFO     | ..............................
[2026-02-19 08:18:25] 2026-02-19 13:17:41,222 | INFO     | . Timing measurements:
[2026-02-19 08:18:25] 2026-02-19 13:17:41,222 | INFO     | . get job = 0 s
[2026-02-19 08:18:25] 2026-02-19 13:17:41,222 | INFO     | . initial setup = 39 s
[2026-02-19 08:18:25] 2026-02-19 13:17:41,222 | INFO     | . payload setup = 56 s
[2026-02-19 08:18:25] 2026-02-19 13:17:41,223 | INFO     | . stage-in = 0 s
[2026-02-19 08:18:25] 2026-02-19 13:17:41,223 | INFO     | . payload execution = 30788 s
[2026-02-19 08:18:25] 2026-02-19 13:17:41,223 | INFO     | . stage-out = 5 s
[2026-02-19 08:18:25] 2026-02-19 13:17:41,223 | INFO     | . log creation = 0 s
[2026-02-19 08:18:25] 2026-02-19 13:17:41,223 | INFO     | ..............................
[2026-02-19 08:18:25] 2026-02-19 13:17:42,823 | INFO     | 
[2026-02-19 08:18:25] 2026-02-19 13:17:42,823 | INFO     | job summary report
[2026-02-19 08:18:25] 2026-02-19 13:17:42,823 | INFO     | --------------------------------------------------
[2026-02-19 08:18:25] 2026-02-19 13:17:42,823 | INFO     | PanDA job id: 7019645090
[2026-02-19 08:18:25] 2026-02-19 13:17:42,823 | INFO     | task id: 48508763
[2026-02-19 08:18:25] 2026-02-19 13:17:42,823 | INFO     | errors: (none)
[2026-02-19 08:18:25] 2026-02-19 13:17:42,824 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-19 08:18:25] 2026-02-19 13:17:42,824 | INFO     | pilot state: finished 
[2026-02-19 08:18:25] 2026-02-19 13:17:42,824 | INFO     | transexitcode: 0
[2026-02-19 08:18:25] 2026-02-19 13:17:42,824 | INFO     | exeerrorcode: 0
[2026-02-19 08:18:25] 2026-02-19 13:17:42,824 | INFO     | exeerrordiag: 
[2026-02-19 08:18:25] 2026-02-19 13:17:42,824 | INFO     | exitcode: 0
[2026-02-19 08:18:25] 2026-02-19 13:17:42,824 | INFO     | exitmsg: OK
[2026-02-19 08:18:25] 2026-02-19 13:17:42,824 | INFO     | cpuconsumptiontime: 65314 s
[2026-02-19 08:18:25] 2026-02-19 13:17:42,824 | INFO     | nevents: 400
[2026-02-19 08:18:25] 2026-02-19 13:17:42,824 | INFO     | neventsw: 0
[2026-02-19 08:18:25] 2026-02-19 13:17:42,824 | INFO     | pid: 438249
[2026-02-19 08:18:25] 2026-02-19 13:17:42,824 | INFO     | pgrp: 438249
[2026-02-19 08:18:25] 2026-02-19 13:17:42,824 | INFO     | corecount: 8
[2026-02-19 08:18:25] 2026-02-19 13:17:42,824 | INFO     | event service: False
[2026-02-19 08:18:25] 2026-02-19 13:17:42,825 | INFO     | sizes: {0: 2281171, 1: 2281772, 2: 2281856, 3: 2281912, 4: 2256333, 5: 2282557, 16: 2282557, 30849: 2320236, 30856: 2329234, 30858: 2329290, 30862: 2329484}
[2026-02-19 08:18:25] 2026-02-19 13:17:42,825 | INFO     | --------------------------------------------------
[2026-02-19 08:18:25] 2026-02-19 13:17:42,825 | INFO     | 
[2026-02-19 08:18:25] 2026-02-19 13:17:42,825 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-02-19 08:18:25] 2026-02-19 13:17:43,025 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-19 08:18:25] 2026-02-19 13:17:43,025 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-19 08:18:25] 2026-02-19 13:17:43,025 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-19 08:18:25] 2026-02-19 13:17:43,025 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-19 08:18:25] 2026-02-19 13:17:43,025 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-19 08:18:25] 2026-02-19 13:17:43,025 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-19 08:18:25] 2026-02-19 13:17:43,026 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-19 08:18:25] 2026-02-19 13:17:43,026 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-19 08:18:25] 2026-02-19 13:17:43,026 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-19 08:18:25] 2026-02-19 13:17:43,026 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-19 08:18:25] 2026-02-19 13:17:43,026 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-19 08:18:25] 2026-02-19 13:17:43,026 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-19 08:18:25] 2026-02-19 13:17:43,026 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-19 08:18:25] 2026-02-19 13:17:43,026 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-19 08:18:25] 2026-02-19 13:17:43,026 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-19 08:18:25] 2026-02-19 13:17:43,064 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-19 08:18:25] 2026-02-19 13:17:43,064 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-19 08:18:25] 2026-02-19 13:17:43,064 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-19 08:18:25] 2026-02-19 13:17:43,064 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-19 08:18:25] 2026-02-19 13:17:43,064 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-19 08:18:25] 2026-02-19 13:17:43,064 | INFO     | job 7019645090 has completed (purged errors)
[2026-02-19 08:18:25] 2026-02-19 13:17:43,064 | INFO     | overall cleanup function is called
[2026-02-19 08:18:25] 2026-02-19 13:17:44,077 | INFO     | --- collectZombieJob: --- 10, [438249]
[2026-02-19 08:18:25] 2026-02-19 13:17:44,077 | INFO     | zombie collector waiting for pid 438249
[2026-02-19 08:18:25] 2026-02-19 13:17:44,077 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-19 08:18:25] 2026-02-19 13:17:44,077 | INFO     | collected zombie processes
[2026-02-19 08:18:25] 2026-02-19 13:17:44,077 | INFO     | will attempt to kill all subprocesses of pid=438249
[2026-02-19 08:18:25] 2026-02-19 13:17:46,417 | INFO     | PID=428172 has CPU usage=15.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-19 08:18:25] 2026-02-19 13:17:46,418 | INFO     | .. there are 83 such processes running
[2026-02-19 08:18:25] 2026-02-19 13:17:47,529 | INFO     | process IDs to be killed: [438249] (in reverse order)
[2026-02-19 08:18:25] 2026-02-19 13:17:48,102 | WARNING  | found no corresponding commands to process id(s)
[2026-02-19 08:18:25] 2026-02-19 13:17:48,102 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-19 08:18:25] 2026-02-19 13:17:48,156 | INFO     | did not find any defunct processes belonging to 438249
[2026-02-19 08:18:25] 2026-02-19 13:17:48,236 | INFO     | did not find any defunct processes belonging to 438249
[2026-02-19 08:18:25] 2026-02-19 13:17:48,236 | INFO     | ready for new job
[2026-02-19 08:18:25] 2026-02-19 13:17:48,236 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-19 08:18:25] 2026-02-19 13:17:48,239 | INFO     | **************************************
[2026-02-19 08:18:25] 2026-02-19 13:17:48,239 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-19 08:18:25] 2026-02-19 13:17:48,239 | INFO     | **************************************
[2026-02-19 08:18:25] 2026-02-19 13:17:48,239 | INFO     | 
[2026-02-19 08:18:25] 2026-02-19 13:17:48,261 | INFO     | architecture information:
[2026-02-19 08:18:25] 2026-02-19 13:17:48,264 | INFO     | executing command: cat /etc/os-release
[2026-02-19 08:18:25] 2026-02-19 13:17:48,337 | INFO     | cat /etc/os-release:
[2026-02-19 08:18:25] NAME="CentOS Linux"
[2026-02-19 08:18:25] VERSION="7 (Core)"
[2026-02-19 08:18:25] ID="centos"
[2026-02-19 08:18:25] ID_LIKE="rhel fedora"
[2026-02-19 08:18:25] VERSION_ID="7"
[2026-02-19 08:18:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-19 08:18:25] ANSI_COLOR="0;31"
[2026-02-19 08:18:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-19 08:18:25] HOME_URL="https://www.centos.org/"
[2026-02-19 08:18:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-19 08:18:25] 
[2026-02-19 08:18:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-19 08:18:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-19 08:18:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-19 08:18:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-19 08:18:25] 
[2026-02-19 08:18:25] 2026-02-19 13:17:48,337 | INFO     | **************************************
[2026-02-19 08:18:25] 2026-02-19 13:17:48,852 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-02-19 08:18:25] 2026-02-19 13:17:49,002 | INFO     | sufficient remaining disk space (390834683904 B)
[2026-02-19 08:18:25] 2026-02-19 13:17:49,002 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-19 08:18:25] 2026-02-19 13:17:49,002 | INFO     | current server update state: UPDATING_FINAL
[2026-02-19 08:18:25] 2026-02-19 13:17:49,003 | INFO     | update_server=False
[2026-02-19 08:18:25] 2026-02-19 13:17:49,003 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-19 08:18:25] 2026-02-19 13:17:49,082 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-19 08:18:25] 2026-02-19 13:17:49,083 | INFO     | aborting loop
[2026-02-19 08:18:25] 2026-02-19 13:17:49,108 | INFO     | all data control threads have been joined
[2026-02-19 08:18:25] 2026-02-19 13:17:49,451 | INFO     | all payload control threads have been joined
[2026-02-19 08:18:25] 2026-02-19 13:17:49,582 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-19 08:18:25] 2026-02-19 13:17:49,788 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-19 08:18:25] 2026-02-19 13:17:50,021 | INFO     | [job] retrieve thread has finished
[2026-02-19 08:18:25] 2026-02-19 13:17:50,088 | INFO     | [job] job monitor thread has finished
[2026-02-19 08:18:25] 2026-02-19 13:17:50,115 | INFO     | [data] control thread has finished
[2026-02-19 08:18:25] 2026-02-19 13:17:50,293 | INFO     | [job] create_data_payload thread has finished
[2026-02-19 08:18:25] 2026-02-19 13:17:50,330 | INFO     | [payload] validate_pre thread has finished
[2026-02-19 08:18:25] 2026-02-19 13:17:50,458 | INFO     | [payload] control thread has finished
[2026-02-19 08:18:25] 2026-02-19 13:17:50,507 | INFO     | all job control threads have been joined
[2026-02-19 08:18:25] 2026-02-19 13:17:50,623 | INFO     | [payload] execute_payloads thread has finished
[2026-02-19 08:18:25] 2026-02-19 13:17:50,747 | INFO     | [payload] validate_post thread has finished
[2026-02-19 08:18:25] 2026-02-19 13:17:50,979 | INFO     | [job] validate thread has finished
[2026-02-19 08:18:25] 2026-02-19 13:17:51,020 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-19 08:18:25] 2026-02-19 13:17:51,020 | INFO     | [data] copytool_in thread has finished
[2026-02-19 08:18:25] 2026-02-19 13:17:51,232 | INFO     | [payload] failed_post thread has finished
[2026-02-19 08:18:25] 2026-02-19 13:17:51,513 | INFO     | [job] control thread has finished
[2026-02-19 08:18:25] 2026-02-19 13:17:51,814 | INFO     | [data] copytool_out thread has finished
[2026-02-19 08:18:25] 2026-02-19 13:17:51,986 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-19 08:18:25] 2026-02-19 13:17:53,008 | INFO     | [job] queue monitor thread has finished
[2026-02-19 08:18:25] 2026-02-19 13:17:53,640 | INFO     | [data] queue_monitor thread has finished
[2026-02-19 08:18:25] 2026-02-19 13:18:04,189 | INFO     | [monitor] cgroup control has ended
[2026-02-19 08:18:25] 2026-02-19 13:18:05,296 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140572277151552)>', '<ExcThread(monitor, started 140571712673536)>']
[2026-02-19 08:18:25] 2026-02-19 13:18:10,322 | INFO     | all workflow threads have been joined
[2026-02-19 08:18:25] 2026-02-19 13:18:10,323 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-19 08:18:25] 2026-02-19 13:18:10,323 | INFO     | traces error code: 0
[2026-02-19 08:18:25] 2026-02-19 13:18:10,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-19 08:18:25] 2026-02-19 13:18:23,071 | INFO     | PID=428172 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-19 08:18:25] 2026-02-19 13:18:23,071 | INFO     | .. there are 83 such processes running
[2026-02-19 08:18:25] 2026-02-19 13:18:23,121 | INFO     | found 0 job(s) in 20 queues
[2026-02-19 08:18:25] 2026-02-19 13:18:23,124 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-19 08:18:25] 2026-02-19 13:18:23,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-19 08:18:25] 2026-02-19 13:18:23,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-19 08:18:25] 2026-02-19 13:18:23,124 | INFO     | [monitor] control thread has ended
[2026-02-19 08:18:25] 2026-02-19 13:18:24,349 [wrapper] ==== pilot stdout END ====
[2026-02-19 08:18:25] 2026-02-19 13:18:24,364 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-19 08:18:25] 2026-02-19 13:18:24,384 [wrapper] pilotpid: 428172
[2026-02-19 08:18:25] 2026-02-19 13:18:24,401 [wrapper] Pilot exit status: 0
[2026-02-19 08:18:25] 2026-02-19 13:18:24,567 [wrapper] pandaids: 7019645090
[2026-02-19 08:18:25] 2026-02-19 13:18:24,748 [wrapper] cleanup supervisor_pilot  358496 428173
[2026-02-19 08:18:25] 2026-02-19 13:18:24,763 [wrapper] Test setup, not cleaning
[2026-02-19 08:18:25] 2026-02-19 13:18:24,792 [wrapper] apfmon messages muted
[2026-02-19 08:18:25] 2026-02-19 13:18:24,806 [wrapper] ==== wrapper stdout END ====
[2026-02-19 08:18:25] 2026-02-19 13:18:24,845 [wrapper] ==== wrapper stderr END ====
[2026-02-19 08:18:25]  *** Error codes and diagnostics ***
[2026-02-19 08:18:25]     "exeErrorCode": 0,
[2026-02-19 08:18:25]     "exeErrorDiag": "",
[2026-02-19 08:18:25]     "pilotErrorCode": 0,
[2026-02-19 08:18:25]     "pilotErrorDiag": "",
[2026-02-19 08:18:25]  *** Listing of results directory ***
[2026-02-19 08:18:25] total 949396
[2026-02-19 08:18:25] -rw-r--r--. 1 boincer umatlas    584627 Feb 18 11:25 pilot3.tar.gz
[2026-02-19 08:18:25] -rwx------. 1 boincer umatlas     36322 Feb 18 11:27 runpilot2-wrapper.sh
[2026-02-19 08:18:25] -rw-r--r--. 1 boincer umatlas      5111 Feb 18 11:28 queuedata.json
[2026-02-19 08:18:25] -rw-r--r--. 1 boincer umatlas       100 Feb 18 23:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-19 08:18:25] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 18 23:41 run_atlas
[2026-02-19 08:18:25] -rw-r--r--. 1 boincer umatlas       105 Feb 18 23:41 job.xml
[2026-02-19 08:18:25] -rw-r--r--. 2 boincer umatlas 677105915 Feb 18 23:41 EVNT.48508760._000703.pool.root.1
[2026-02-19 08:18:25] -rw-r--r--. 2 boincer umatlas     15845 Feb 18 23:41 start_atlas.sh
[2026-02-19 08:18:25] drwxrwx--x. 2 boincer umatlas        68 Feb 18 23:41 shared
[2026-02-19 08:18:25] -rw-r--r--. 2 boincer umatlas    597958 Feb 18 23:41 input.tar.gz
[2026-02-19 08:18:25] -rw-r--r--. 1 boincer umatlas         0 Feb 18 23:41 boinc_lockfile
[2026-02-19 08:18:25] -rw-r--r--. 1 boincer umatlas      2552 Feb 18 23:41 pandaJob.out
[2026-02-19 08:18:25] -rw-------. 1 boincer umatlas   1001042 Feb 18 23:42 agis_schedconf.cvmfs.json
[2026-02-19 08:18:25] -rw-------. 1 boincer umatlas       440 Feb 18 23:43 workernode_map.json
[2026-02-19 08:18:25] drwx------. 5 boincer umatlas      4096 Feb 18 23:43 pilot3
[2026-02-19 08:18:25] -rw-r--r--. 1 boincer umatlas      6779 Feb 19 08:12 init_data.xml
[2026-02-19 08:18:25] -rw-------. 1 boincer umatlas 283381947 Feb 19 08:16 HITS.48508763._036043.pool.root.1
[2026-02-19 08:18:25] -rw-r--r--. 1 boincer umatlas       531 Feb 19 08:16 boinc_task_state.xml
[2026-02-19 08:18:25] -rw-------. 1 boincer umatlas      1041 Feb 19 08:17 memory_monitor_summary.json
[2026-02-19 08:18:25] -rw-------. 1 boincer umatlas   1513015 Feb 19 08:17 agis_ddmendpoints.agis.ALL.json
[2026-02-19 08:18:25] -rw-------. 1 boincer umatlas    613747 Feb 19 08:17 log.48508763._036043.job.log.tgz.1
[2026-02-19 08:18:25] -rw-------. 1 boincer umatlas      6391 Feb 19 08:17 heartbeat.json
[2026-02-19 08:18:25] -rw-r--r--. 1 boincer umatlas      8192 Feb 19 08:18 boinc_mmap_file
[2026-02-19 08:18:25] -rw-r--r--. 1 boincer umatlas        28 Feb 19 08:18 wrapper_checkpoint.txt
[2026-02-19 08:18:25] -rw-------. 1 boincer umatlas        95 Feb 19 08:18 pilot_heartbeat.json
[2026-02-19 08:18:25] -rw-------. 1 boincer umatlas       822 Feb 19 08:18 pilotlog.txt
[2026-02-19 08:18:25] -rw-------. 1 boincer umatlas   3271997 Feb 19 08:18 log.48508763._036043.job.log.1
[2026-02-19 08:18:25] -rw-------. 1 boincer umatlas       357 Feb 19 08:18 output.list
[2026-02-19 08:18:25] -rw-r--r--. 1 boincer umatlas       620 Feb 19 08:18 runtime_log
[2026-02-19 08:18:25] -rw-------. 1 boincer umatlas   3901440 Feb 19 08:18 result.tar.gz
[2026-02-19 08:18:25] -rw-r--r--. 1 boincer umatlas      8812 Feb 19 08:18 runtime_log.err
[2026-02-19 08:18:25] -rw-------. 1 boincer umatlas       657 Feb 19 08:18 9iEODmQZzC9n9Rq4apOajLDm4fhM0noT9bVooX4SDmS9uKDmTeyzZn.diag
[2026-02-19 08:18:25] -rw-r--r--. 1 boincer umatlas     21274 Feb 19 08:18 stderr.txt
[2026-02-19 08:18:25] HITS file was successfully produced:
[2026-02-19 08:18:25] -rw-------. 1 boincer umatlas 283381947 Feb 19 08:16 shared/HITS.pool.root.1
[2026-02-19 08:18:25]  *** Contents of shared directory: ***
[2026-02-19 08:18:25] total 942400
[2026-02-19 08:18:25] -rw-r--r--. 2 boincer umatlas 677105915 Feb 18 23:41 ATLAS.root_0
[2026-02-19 08:18:25] -rw-r--r--. 2 boincer umatlas     15845 Feb 18 23:41 start_atlas.sh
[2026-02-19 08:18:25] -rw-r--r--. 2 boincer umatlas    597958 Feb 18 23:41 input.tar.gz
[2026-02-19 08:18:25] -rw-------. 1 boincer umatlas 283381947 Feb 19 08:16 HITS.pool.root.1
[2026-02-19 08:18:25] -rw-------. 1 boincer umatlas   3901440 Feb 19 08:18 result.tar.gz
08:18:26 (421467): run_atlas exited; CPU time 67193.325520
08:18:26 (421467): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN