Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-19 13:54:24 (21216): vboxwrapper version 26210
2026-02-19 13:54:24 (21216): BOINC client version: 8.2.8
2026-02-19 13:54:25 (21216): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2026-02-19 13:54:25 (21216): Successfully copied 'init_data.xml' to the shared directory.
2026-02-19 13:54:25 (21216): Create VM. (boinc_b0bb95f58e0d9c58, slot#1)
2026-02-19 13:54:26 (21216): Setting Memory Size for VM. (4600MB)
2026-02-19 13:54:26 (21216): Setting CPU Count for VM. (6)
2026-02-19 13:54:26 (21216): Setting Chipset Options for VM.
2026-02-19 13:54:27 (21216): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-19 13:54:27 (21216): Setting Boot Options for VM.
2026-02-19 13:54:27 (21216): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-19 13:54:28 (21216): Enabling VM Network Access.
2026-02-19 13:54:28 (21216): Disabling USB Support for VM.
2026-02-19 13:54:28 (21216): Disabling COM Port Support for VM.
2026-02-19 13:54:28 (21216): Disabling LPT Port Support for VM.
2026-02-19 13:54:29 (21216): Disabling Audio Support for VM.
2026-02-19 13:54:29 (21216): Disabling Clipboard Support for VM.
2026-02-19 13:54:29 (21216): Disabling Drag and Drop Support for VM.
2026-02-19 13:54:29 (21216): Adding storage controller(s) to VM.
2026-02-19 13:54:30 (21216): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-19 13:54:32 (21216): Adding VirtualBox Guest Additions to VM.
2026-02-19 13:54:32 (21216): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-19 13:54:32 (21216): forwarding host port 61467 to guest port 80
2026-02-19 13:54:33 (21216): Enabling remote desktop for VM.
2026-02-19 13:54:33 (21216): Required extension pack not installed, remote desktop not enabled.
2026-02-19 13:54:33 (21216): Enabling shared directory for VM.
2026-02-19 13:54:33 (21216): Starting VM using VBoxManage interface. (boinc_b0bb95f58e0d9c58, slot#1)
2026-02-19 13:54:38 (21216): Successfully started VM. (PID = '23380')
2026-02-19 13:54:38 (21216): Reporting VM Process ID to BOINC.
2026-02-19 13:54:38 (21216): Guest Log: BIOS: VirtualBox 7.0.14
2026-02-19 13:54:38 (21216): Guest Log: CPUID EDX: 0x178bfbff
2026-02-19 13:54:38 (21216): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-19 13:54:38 (21216): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-19 13:54:38 (21216): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-19 13:54:38 (21216): Detected: Web Application Enabled (http://localhost:61467)
2026-02-19 13:54:38 (21216): Preference change detected
2026-02-19 13:54:38 (21216): Setting CPU throttle for VM. (60%)
2026-02-19 13:54:39 (21216): Setting network throttle for VM. (10240KB)
2026-02-19 13:54:39 (21216): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-19 13:54:40 (21216): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-19 13:54:40 (21216): Guest Log: BIOS: Booting from Hard Disk...
2026-02-19 13:54:43 (21216): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-19 13:54:43 (21216): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-19 13:54:43 (21216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-19 13:54:49 (21216): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-19 13:54:49 (21216): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-19 13:54:55 (21216): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-19 13:54:55 (21216): Guest Log: 00:00:00.000107 main     Log opened 2026-02-19T13:54:54.075391000Z
2026-02-19 13:54:55 (21216): Guest Log: 00:00:00.000184 main     OS Product: Linux
2026-02-19 13:54:55 (21216): Guest Log: 00:00:00.000216 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-19 13:54:55 (21216): Guest Log: 00:00:00.000231 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-19 13:54:55 (21216): Guest Log: 00:00:00.000324 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-19 13:54:55 (21216): Guest Log: 00:00:00.000325 main     Process ID: 1272
2026-02-19 13:54:55 (21216): Guest Log: 00:00:00.000326 main     Package type: LINUX_64BITS_GENERIC
2026-02-19 13:54:55 (21216): Guest Log: 00:00:00.001210 main     5.2.32 r132073 started. Verbose level = 0
2026-02-19 13:54:56 (21216): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-19 13:54:56 (21216): Guest Log: [INFO] Mounting shared directory
2026-02-19 13:54:56 (21216): Guest Log: [INFO] Checking for init_data.xml
2026-02-19 13:55:05 (21216): Guest Log: 00:00:10.004655 timesync vgsvcTimeSyncWorker: Radical guest time change: -28 788 179 232 000ns (GuestNow=1 771 480 505 898 335 000 ns GuestLast=1 771 509 294 077 567 000 ns fSetTimeLastLoop=true )
2026-02-19 13:56:06 (21216): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-19 13:56:06 (21216): Guest Log: [INFO] Detected branch: prod
2026-02-19 13:56:06 (21216): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-19 13:56:07 (21216): Guest Log: Copying input files
2026-02-19 13:56:10 (21216): Guest Log: Copied input files into RunAtlas.
2026-02-19 13:56:10 (21216): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-19 13:56:10 (21216): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-19 13:56:10 (21216): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-19 13:56:10 (21216): Guest Log: Further information can be found at the LHC@home message board.
2026-02-19 13:56:21 (21216): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-19 13:56:21 (21216): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-19 13:56:21 (21216): Guest Log: 2.6.3.0 1583 0 30020 156396 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-19 13:56:22 (21216): Guest Log: copied the webapp to /var/www
2026-02-19 13:56:22 (21216): Guest Log: ATHENA_PROC_NUMBER=6
2026-02-19 13:56:22 (21216): Guest Log: ATHENA_CORE_NUMBER=6
2026-02-19 13:56:23 (21216): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-19 13:56:23 (21216): Guest Log:  *** Starting ATLAS job. (PandaID=7019645057 taskID=48508763) ***
2026-02-19 15:34:43 (21216): Status Report: Elapsed Time: '6000.000000'
2026-02-19 15:34:43 (21216): Status Report: CPU Time: '16148.125000'
2026-02-19 15:55:16 (21216): VM state change detected. (old = 'running', new = 'paused')
2026-02-19 17:37:04 (21216): VM state change detected. (old = 'paused', new = 'running')
2026-02-19 17:37:07 (21216): Guest Log: 02:00:22.902854 timesync vgsvcTimeSyncWorker: Radical host time change: 6 118 114 000 000ns (HostNow=1 771 493 826 909 000 000 ns HostLast=1 771 487 708 795 000 000 ns)
2026-02-19 17:37:17 (21216): Guest Log: 02:00:32.909997 timesync vgsvcTimeSyncWorker: Radical guest time change: 6 118 120 075 000ns (GuestNow=1 771 493 836 916 234 000 ns GuestLast=1 771 487 718 796 159 000 ns fSetTimeLastLoop=true )
2026-02-19 18:25:16 (21216): Guest Log:  *** Job finished ***
2026-02-19 18:25:16 (21216): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-19 18:25:16 (21216): Guest Log: 2026-02-19 10:24:46,333 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-19 18:25:16 (21216): Guest Log: 2026-02-19 10:24:46,333 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-19 18:25:16 (21216): Guest Log: 2026-02-19 10:25:06,375 | INFO     | [monitor] cgroup control has ended
2026-02-19 18:25:16 (21216): Guest Log: 2026-02-19 10:25:07,657 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140313630791488)>', '<ExcThread(monitor, started 140313184151296)>']
2026-02-19 18:25:16 (21216): Guest Log: 2026-02-19 10:25:08,470 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-19 18:25:16 (21216): Guest Log: 2026-02-19 10:25:08,470 | INFO     | [monitor] control thread has ended
2026-02-19 18:25:16 (21216): Guest Log: 2026-02-19 10:25:12,663 | INFO     | all workflow threads have been joined
2026-02-19 18:25:16 (21216): Guest Log: 2026-02-19 10:25:12,663 | INFO     | end of generic workflow (traces error code: 0)
2026-02-19 18:25:16 (21216): Guest Log: 2026-02-19 10:25:12,663 | INFO     | traces error code: 0
2026-02-19 18:25:16 (21216): Guest Log: 2026-02-19 10:25:12,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-19 18:25:16 (21216): Guest Log: 2026-02-19 10:25:12,794 [wrapper] ==== pilot stdout END ====
2026-02-19 18:25:16 (21216): Guest Log: 2026-02-19 10:25:12,799 [wrapper] ==== wrapper stdout RESUME ====
2026-02-19 18:25:16 (21216): Guest Log: 2026-02-19 10:25:12,803 [wrapper] pilotpid: 6020
2026-02-19 18:25:16 (21216): Guest Log: 2026-02-19 10:25:12,807 [wrapper] Pilot exit status: 0
2026-02-19 18:25:16 (21216): Guest Log: 2026-02-19 10:25:13,817 [wrapper] pandaids: 7019645057
2026-02-19 18:25:16 (21216): Guest Log: 2026-02-19 10:25:13,837 [wrapper] cleanup supervisor_pilot 26315 6021
2026-02-19 18:25:16 (21216): Guest Log: 2026-02-19 10:25:13,841 [wrapper] Test setup, not cleaning
2026-02-19 18:25:16 (21216): Guest Log: 2026-02-19 10:25:13,845 [wrapper] apfmon messages muted
2026-02-19 18:25:16 (21216): Guest Log: 2026-02-19 10:25:13,848 [wrapper] ==== wrapper stdout END ====
2026-02-19 18:25:16 (21216): Guest Log: 2026-02-19 10:25:13,851 [wrapper] ==== wrapper stderr END ====
2026-02-19 18:25:16 (21216): Guest Log:  *** Error codes and diagnostics ***
2026-02-19 18:25:16 (21216): Guest Log:     "exeErrorCode": 0,
2026-02-19 18:25:16 (21216): Guest Log:     "exeErrorDiag": "",
2026-02-19 18:25:16 (21216): Guest Log:     "pilotErrorCode": 0,
2026-02-19 18:25:16 (21216): Guest Log:     "pilotErrorDiag": "",
2026-02-19 18:25:16 (21216): Guest Log:  *** Listing of results directory ***
2026-02-19 18:25:16 (21216): Guest Log: total 284368
2026-02-19 18:25:16 (21216): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 18 16:25 pilot3.tar.gz
2026-02-19 18:25:16 (21216): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 18 16:27 runpilot2-wrapper.sh
2026-02-19 18:25:16 (21216): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 18 16:28 queuedata.json
2026-02-19 18:25:16 (21216): Guest Log: -rwxr-xr-x. 1 atlas atlas      8686 Feb 19 05:56 init_data.xml
2026-02-19 18:25:16 (21216): Guest Log: -rwxr-xr-x. 1 atlas atlas    597956 Feb 19 05:56 input.tar.gz
2026-02-19 18:25:16 (21216): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb 19 05:56 start_atlas.sh
2026-02-19 18:25:16 (21216): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 19 05:56 EVNT.48508760._000702.pool.root.1 -> /data/./ATLAS.root_0
2026-02-19 18:25:16 (21216): Guest Log: -rw-r--r--. 1 atlas atlas      2552 Feb 19 05:56 pandaJob.out
2026-02-19 18:25:16 (21216): Guest Log: -rw-------. 1 atlas atlas       410 Feb 19 06:03 workernode_map.json
2026-02-19 18:25:16 (21216): Guest Log: -rw-------. 1 atlas atlas   1001042 Feb 19 06:04 agis_schedconf.cvmfs.json
2026-02-19 18:25:16 (21216): Guest Log: drwx------. 5 atlas atlas      4096 Feb 19 06:04 pilot3
2026-02-19 18:25:16 (21216): Guest Log: -rw-------. 1 atlas atlas 283965855 Feb 19 10:23 HITS.48508763._036010.pool.root.1
2026-02-19 18:25:16 (21216): Guest Log: -rw-------. 1 atlas atlas      1028 Feb 19 10:24 memory_monitor_summary.json
2026-02-19 18:25:16 (21216): Guest Log: -rw-------. 1 atlas atlas   1513015 Feb 19 10:24 agis_ddmendpoints.agis.ALL.json
2026-02-19 18:25:16 (21216): Guest Log: -rw-------. 1 atlas atlas    372937 Feb 19 10:24 log.48508763._036010.job.log.tgz.1
2026-02-19 18:25:16 (21216): Guest Log: -rw-------. 1 atlas atlas      6328 Feb 19 10:24 heartbeat.json
2026-02-19 18:25:16 (21216): Guest Log: -rw-------. 1 atlas atlas        97 Feb 19 10:24 pilot_heartbeat.json
2026-02-19 18:25:16 (21216): Guest Log: -rw-------. 1 atlas atlas      4873 Feb 19 10:25 pilotlog.txt
2026-02-19 18:25:16 (21216): Guest Log: -rw-------. 1 atlas atlas   1306702 Feb 19 10:25 log.48508763._036010.job.log.1
2026-02-19 18:25:16 (21216): Guest Log: -rw-------. 1 atlas atlas       357 Feb 19 10:25 output.list
2026-02-19 18:25:16 (21216): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 19 10:25 runtime_log
2026-02-19 18:25:16 (21216): Guest Log: -rw-------. 1 atlas atlas   1699840 Feb 19 10:25 result.tar.gz
2026-02-19 18:25:16 (21216): Guest Log: -rw-r--r--. 1 atlas atlas      8764 Feb 19 10:25 runtime_log.err
2026-02-19 18:25:16 (21216): Guest Log: -rw-------. 1 atlas atlas       661 Feb 19 10:25 2fOMDmQZzC9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmXVwKDmdcgGlm.diag
2026-02-19 18:25:16 (21216): Guest Log: Looking for outputfile HITS.48508763._036010.pool.root.1
2026-02-19 18:25:16 (21216): Guest Log: HITS file was successfully produced
2026-02-19 18:25:16 (21216): Guest Log: -rw-------. 1 atlas atlas 283965855 Feb 19 10:23 /home/atlas/RunAtlas/HITS.48508763._036010.pool.root.1
2026-02-19 18:25:17 (21216): Guest Log: Successfully finished the ATLAS job!
2026-02-19 18:25:17 (21216): Guest Log: Copying the results back to the shared directory!
2026-02-19 18:25:17 (21216): Guest Log:  *** Contents of shared directory: ***
2026-02-19 18:25:17 (21216): Guest Log: total 941780
2026-02-19 18:25:17 (21216): Guest Log: -rwxrwxrwx. 1 root root 678086922 Feb 19 05:54 ATLAS.root_0
2026-02-19 18:25:17 (21216): Guest Log: -rwxrwxrwx. 1 root root 283965855 Feb 19 10:25 HITS.pool.root.1
2026-02-19 18:25:17 (21216): Guest Log: -rwxrwxrwx. 1 root root      8686 Feb 19 05:54 init_data.xml
2026-02-19 18:25:17 (21216): Guest Log: -rwxrwxrwx. 1 root root    597956 Feb 19 01:55 input.tar.gz
2026-02-19 18:25:17 (21216): Guest Log: -rwxrwxrwx. 1 root root   1699840 Feb 19 10:25 result.tar.gz
2026-02-19 18:25:17 (21216): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb 19 01:55 start_atlas.sh
2026-02-19 18:25:17 (21216): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-19 18:25:17 (21216): VM Completion File Detected.
2026-02-19 18:25:17 (21216): Powering off VM.
2026-02-19 18:25:17 (21216): Successfully stopped VM.
2026-02-19 18:25:17 (21216): Deregistering VM. (boinc_b0bb95f58e0d9c58, slot#1)
2026-02-19 18:25:17 (21216): Removing network bandwidth throttle group from VM.
2026-02-19 18:25:17 (21216): Removing VM from VirtualBox.
2026-02-19 18:25:23 (21216): called boinc_finish(0)

</stderr_txt>
]]>

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