Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:15:07 (3973420): wrapper (7.7.26015): starting
20:15:07 (3973420): wrapper: running run_atlas (--nthreads 4)
[2026-02-22 20:15:07] Arguments: --nthreads 4
[2026-02-22 20:15:07] Threads: 4
[2026-02-22 20:15:07] Checking for CVMFS
[2026-02-22 20:15:07] No cvmfs_config command found, will try listing directly
[2026-02-22 20:15:07] CVMFS is ok
[2026-02-22 20:15:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-22 20:15:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-22 20:15:07] Further information can be found at the LHC@home message board.
[2026-02-22 20:15:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-22 20:15:07] Checking for apptainer binary...
[2026-02-22 20:15:07] which: no apptainer in ((null))
[2026-02-22 20:15:07] apptainer is not installed, using version from CVMFS
[2026-02-22 20:15:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-22 20:15:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-02-22 20:15:07] apptainer works
[2026-02-22 20:15:07] Set ATHENA_PROC_NUMBER=4
[2026-02-22 20:15:07] Set ATHENA_CORE_NUMBER=4
[2026-02-22 20:15:07] Starting ATLAS job with PandaID=7019391705
[2026-02-22 20:15:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-23 00:35:56]  *** The last 200 lines of the pilot log: ***
[2026-02-23 00:35:56] 2026-02-22 23:23:16,111 | INFO     | extracted standard memory fields from prmon json
[2026-02-23 00:35:56] 2026-02-22 23:23:16,111 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-23 00:35:56] 2026-02-22 23:23:16,111 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-23 00:35:56] 2026-02-22 23:23:16,112 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-23 00:35:56] 2026-02-22 23:23:16,116 | INFO     | fitting pss+swap vs Time
[2026-02-23 00:35:56] 2026-02-22 23:23:16,117 | INFO     | sum of square deviations: 4504437945.0
[2026-02-23 00:35:56] 2026-02-22 23:23:16,118 | INFO     | sum of deviations: -105866206959.50002
[2026-02-23 00:35:56] 2026-02-22 23:23:16,118 | INFO     | mean x: 1771795153.5
[2026-02-23 00:35:56] 2026-02-22 23:23:16,119 | INFO     | mean y: 2450747.62704918
[2026-02-23 00:35:56] 2026-02-22 23:23:16,119 | INFO     | intersect: 41644323651.76584
[2026-02-23 00:35:56] 2026-02-22 23:23:16,119 | INFO     | chi2: 2.511983400660257
[2026-02-23 00:35:56] 2026-02-22 23:23:16,120 | INFO     | sum of square deviations: 4233158440.0
[2026-02-23 00:35:56] 2026-02-22 23:23:16,121 | INFO     | sum of deviations: -88740652983.0
[2026-02-23 00:35:56] 2026-02-22 23:23:16,121 | INFO     | mean x: 1771795001.0
[2026-02-23 00:35:56] 2026-02-22 23:23:16,121 | INFO     | mean y: 2460242.251046025
[2026-02-23 00:35:56] 2026-02-22 23:23:16,122 | INFO     | intersect: 37144997562.6248
[2026-02-23 00:35:56] 2026-02-22 23:23:16,122 | INFO     | chi2: 1.8543102779332719
[2026-02-23 00:35:56] 2026-02-22 23:23:16,122 | INFO     | current chi2=1.8543102779332719 (change=26.181427892959814 %)
[2026-02-23 00:35:56] 2026-02-22 23:23:16,123 | INFO     | sum of square deviations: 3972995422.5
[2026-02-23 00:35:56] 2026-02-22 23:23:16,124 | INFO     | sum of deviations: -86224323134.00002
[2026-02-23 00:35:56] 2026-02-22 23:23:16,124 | INFO     | mean x: 1771794848.5
[2026-02-23 00:35:56] 2026-02-22 23:23:16,124 | INFO     | mean y: 2461717.4615384615
[2026-02-23 00:35:56] 2026-02-22 23:23:16,124 | INFO     | intersect: 38455013331.04714
[2026-02-23 00:35:56] 2026-02-22 23:23:16,125 | INFO     | chi2: 1.8443660382440163
[2026-02-23 00:35:56] 2026-02-22 23:23:16,125 | INFO     | current chi2=1.8443660382440163 (change=0.5362770086319585 %)
[2026-02-23 00:35:56] 2026-02-22 23:23:16,125 | INFO     | right removable region: 233
[2026-02-23 00:35:56] 2026-02-22 23:23:16,125 | INFO     | sum of square deviations: 4233158440.0
[2026-02-23 00:35:56] 2026-02-22 23:23:16,127 | INFO     | sum of deviations: -134615967540.0
[2026-02-23 00:35:56] 2026-02-22 23:23:16,127 | INFO     | mean x: 1771795306.0
[2026-02-23 00:35:56] 2026-02-22 23:23:16,127 | INFO     | mean y: 2466700.2761506275
[2026-02-23 00:35:56] 2026-02-22 23:23:16,127 | INFO     | intersect: 56346197458.44271
[2026-02-23 00:35:56] 2026-02-22 23:23:16,128 | INFO     | chi2: 1.2009665498928608
[2026-02-23 00:35:56] 2026-02-22 23:23:16,128 | INFO     | current chi2=1.2009665498928608 (change=52.19050613243721 %)
[2026-02-23 00:35:56] 2026-02-22 23:23:16,128 | INFO     | sum of square deviations: 3972995422.5
[2026-02-23 00:35:56] 2026-02-22 23:23:16,130 | INFO     | sum of deviations: -125911950069.0001
[2026-02-23 00:35:56] 2026-02-22 23:23:16,130 | INFO     | mean x: 1771795458.5
[2026-02-23 00:35:56] 2026-02-22 23:23:16,130 | INFO     | mean y: 2461584.3504273505
[2026-02-23 00:35:56] 2026-02-22 23:23:16,130 | INFO     | intersect: 56154104760.10673
[2026-02-23 00:35:56] 2026-02-22 23:23:16,131 | INFO     | chi2: 1.1975410894003988
[2026-02-23 00:35:56] 2026-02-22 23:23:16,131 | INFO     | current chi2=1.1975410894003988 (change=0.2852253039660047 %)
[2026-02-23 00:35:56] 2026-02-22 23:23:16,131 | INFO     | left removable region: 20
[2026-02-23 00:35:56] 2026-02-22 23:23:16,131 | INFO     | sum of square deviations: 2996454322.0
[2026-02-23 00:35:56] 2026-02-22 23:23:16,133 | INFO     | sum of deviations: -85637305982.0
[2026-02-23 00:35:56] 2026-02-22 23:23:16,133 | INFO     | mean x: 1771795428.0
[2026-02-23 00:35:56] 2026-02-22 23:23:16,133 | INFO     | mean y: 2460065.755868545
[2026-02-23 00:35:56] 2026-02-22 23:23:16,133 | INFO     | intersect: 50639570096.47725
[2026-02-23 00:35:56] 2026-02-22 23:23:16,133 | INFO     | chi2: 0.49047473658713187
[2026-02-23 00:35:56] 2026-02-22 23:23:16,133 | INFO     | current memory leak: -28.58 B/s (using 213 data points, chi2=0.49)
[2026-02-23 00:35:56] 2026-02-22 23:23:16,134 | INFO     | could have reported an average CPU frequency of 2595 MHz (12 samples)
[2026-02-23 00:35:56] 2026-02-22 23:23:16,134 | INFO     | ..............................
[2026-02-23 00:35:56] 2026-02-22 23:23:16,134 | INFO     | . Timing measurements:
[2026-02-23 00:35:56] 2026-02-22 23:23:16,134 | INFO     | . get job = 0 s
[2026-02-23 00:35:56] 2026-02-22 23:23:16,134 | INFO     | . initial setup = 6 s
[2026-02-23 00:35:56] 2026-02-22 23:23:16,134 | INFO     | . payload setup = 7 s
[2026-02-23 00:35:56] 2026-02-22 23:23:16,135 | INFO     | . stage-in = 0 s
[2026-02-23 00:35:56] 2026-02-22 23:23:16,135 | INFO     | . payload execution = 14851 s
[2026-02-23 00:35:56] 2026-02-22 23:23:16,135 | INFO     | . stage-out = 1 s
[2026-02-23 00:35:56] 2026-02-22 23:23:16,135 | INFO     | . log creation = 0 s
[2026-02-23 00:35:56] 2026-02-22 23:23:16,135 | INFO     | ..............................
[2026-02-23 00:35:56] 2026-02-22 23:23:16,229 | INFO     | 
[2026-02-23 00:35:56] 2026-02-22 23:23:16,229 | INFO     | job summary report
[2026-02-23 00:35:56] 2026-02-22 23:23:16,229 | INFO     | --------------------------------------------------
[2026-02-23 00:35:56] 2026-02-22 23:23:16,229 | INFO     | PanDA job id: 7019391705
[2026-02-23 00:35:56] 2026-02-22 23:23:16,229 | INFO     | task id: 48508763
[2026-02-23 00:35:56] 2026-02-22 23:23:16,229 | INFO     | errors: (none)
[2026-02-23 00:35:56] 2026-02-22 23:23:16,229 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-23 00:35:56] 2026-02-22 23:23:16,230 | INFO     | pilot state: finished 
[2026-02-23 00:35:56] 2026-02-22 23:23:16,230 | INFO     | transexitcode: 0
[2026-02-23 00:35:56] 2026-02-22 23:23:16,230 | INFO     | exeerrorcode: 0
[2026-02-23 00:35:56] 2026-02-22 23:23:16,230 | INFO     | exeerrordiag: 
[2026-02-23 00:35:56] 2026-02-22 23:23:16,230 | INFO     | exitcode: 0
[2026-02-23 00:35:56] 2026-02-22 23:23:16,230 | INFO     | exitmsg: OK
[2026-02-23 00:35:56] 2026-02-22 23:23:16,230 | INFO     | cpuconsumptiontime: 57166 s
[2026-02-23 00:35:56] 2026-02-22 23:23:16,230 | INFO     | nevents: 400
[2026-02-23 00:35:56] 2026-02-22 23:23:16,230 | INFO     | neventsw: 0
[2026-02-23 00:35:56] 2026-02-22 23:23:16,230 | INFO     | pid: 3982852
[2026-02-23 00:35:56] 2026-02-22 23:23:16,230 | INFO     | pgrp: 3982852
[2026-02-23 00:35:56] 2026-02-22 23:23:16,230 | INFO     | corecount: 4
[2026-02-23 00:35:56] 2026-02-22 23:23:16,231 | INFO     | event service: False
[2026-02-23 00:35:56] 2026-02-22 23:23:16,231 | INFO     | sizes: {0: 2281173, 1: 2282302, 2: 2282302, 14862: 2313162, 14863: 2322182, 14867: 2322560}
[2026-02-23 00:35:56] 2026-02-22 23:23:16,231 | INFO     | --------------------------------------------------
[2026-02-23 00:35:56] 2026-02-22 23:23:16,231 | INFO     | 
[2026-02-23 00:35:56] 2026-02-22 23:23:16,231 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2026-02-23 00:35:56] 2026-02-22 23:23:16,253 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-23 00:35:56] 2026-02-22 23:23:16,254 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-23 00:35:56] 2026-02-22 23:23:16,254 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-23 00:35:56] 2026-02-22 23:23:16,254 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-23 00:35:56] 2026-02-22 23:23:16,254 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-23 00:35:56] 2026-02-22 23:23:16,254 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-23 00:35:56] 2026-02-22 23:23:16,254 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-23 00:35:56] 2026-02-22 23:23:16,254 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-23 00:35:56] 2026-02-22 23:23:16,254 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-23 00:35:56] 2026-02-22 23:23:16,254 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-23 00:35:56] 2026-02-22 23:23:16,254 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-23 00:35:56] 2026-02-22 23:23:16,254 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-23 00:35:56] 2026-02-22 23:23:16,255 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-23 00:35:56] 2026-02-22 23:23:16,255 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-23 00:35:56] 2026-02-22 23:23:16,255 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-23 00:35:56] 2026-02-22 23:23:16,255 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-23 00:35:56] 2026-02-22 23:23:16,255 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-23 00:35:56] 2026-02-22 23:23:16,255 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-23 00:35:56] 2026-02-22 23:23:16,255 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-23 00:35:56] 2026-02-22 23:23:16,255 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-23 00:35:56] 2026-02-22 23:23:16,255 | INFO     | job 7019391705 has completed (purged errors)
[2026-02-23 00:35:56] 2026-02-22 23:23:16,256 | INFO     | overall cleanup function is called
[2026-02-23 00:35:56] 2026-02-22 23:23:17,244 | WARNING  | process 3982852 can no longer be monitored (due to stat problems) - aborting
[2026-02-23 00:35:56] 2026-02-22 23:23:17,268 | INFO     | --- collectZombieJob: --- 10, [3982852]
[2026-02-23 00:35:56] 2026-02-22 23:23:17,269 | INFO     | zombie collector waiting for pid 3982852
[2026-02-23 00:35:56] 2026-02-22 23:23:17,269 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-23 00:35:56] 2026-02-22 23:23:17,269 | INFO     | collected zombie processes
[2026-02-23 00:35:56] 2026-02-22 23:23:17,269 | INFO     | will attempt to kill all subprocesses of pid=3982852
[2026-02-23 00:35:56] 2026-02-22 23:23:18,127 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-23 00:35:56] 2026-02-22 23:23:18,497 | INFO     | process IDs to be killed: [3982852] (in reverse order)
[2026-02-23 00:35:56] 2026-02-22 23:23:18,634 | WARNING  | found no corresponding commands to process id(s)
[2026-02-23 00:35:56] 2026-02-22 23:23:18,634 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-23 00:35:56] 2026-02-22 23:23:18,670 | INFO     | did not find any defunct processes belonging to 3982852
[2026-02-23 00:35:56] 2026-02-22 23:23:18,705 | INFO     | did not find any defunct processes belonging to 3982852
[2026-02-23 00:35:56] 2026-02-22 23:23:18,705 | INFO     | ready for new job
[2026-02-23 00:35:56] 2026-02-22 23:23:18,705 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-23 00:35:56] 2026-02-22 23:23:18,708 | INFO     | **************************************
[2026-02-23 00:35:56] 2026-02-22 23:23:18,708 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-23 00:35:56] 2026-02-22 23:23:18,708 | INFO     | **************************************
[2026-02-23 00:35:56] 2026-02-22 23:23:18,708 | INFO     | 
[2026-02-23 00:35:56] 2026-02-22 23:23:18,713 | INFO     | architecture information:
[2026-02-23 00:35:56] 2026-02-22 23:23:18,714 | INFO     | executing command: cat /etc/os-release
[2026-02-23 00:35:56] 2026-02-22 23:23:18,730 | INFO     | cat /etc/os-release:
[2026-02-23 00:35:56] NAME="CentOS Linux"
[2026-02-23 00:35:56] VERSION="7 (Core)"
[2026-02-23 00:35:56] ID="centos"
[2026-02-23 00:35:56] ID_LIKE="rhel fedora"
[2026-02-23 00:35:56] VERSION_ID="7"
[2026-02-23 00:35:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-23 00:35:56] ANSI_COLOR="0;31"
[2026-02-23 00:35:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-23 00:35:56] HOME_URL="https://www.centos.org/"
[2026-02-23 00:35:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-23 00:35:56] 
[2026-02-23 00:35:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-23 00:35:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-23 00:35:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-23 00:35:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-23 00:35:56] 
[2026-02-23 00:35:56] 2026-02-22 23:23:18,731 | INFO     | **************************************
[2026-02-23 00:35:56] 2026-02-22 23:23:18,850 | INFO     | number of running child processes to parent process 3982852: 1
[2026-02-23 00:35:56] 2026-02-22 23:23:18,851 | INFO     | maximum number of monitored processes: 6
[2026-02-23 00:35:56] 2026-02-22 23:23:18,851 | INFO     | aborting job monitoring since job object (job id=7019391705) has expired
[2026-02-23 00:35:56] 2026-02-22 23:23:19,233 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2026-02-23 00:35:56] 2026-02-22 23:23:19,253 | INFO     | sufficient remaining disk space (662957981696 B)
[2026-02-23 00:35:56] 2026-02-22 23:23:19,254 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-23 00:35:56] 2026-02-22 23:23:19,254 | INFO     | current server update state: UPDATING_FINAL
[2026-02-23 00:35:56] 2026-02-22 23:23:19,254 | INFO     | update_server=False
[2026-02-23 00:35:56] 2026-02-22 23:23:19,254 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-23 00:35:56] 2026-02-22 23:23:19,254 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-23 00:35:56] 2026-02-22 23:23:19,254 | INFO     | will abort loop
[2026-02-23 00:35:56] 2026-02-22 23:23:19,423 | INFO     | all data control threads have been joined
[2026-02-23 00:35:56] 2026-02-22 23:23:20,260 | INFO     | [job] retrieve thread has finished
[2026-02-23 00:35:56] 2026-02-22 23:23:20,260 | INFO     | [job] job monitor thread has finished
[2026-02-23 00:35:56] 2026-02-22 23:23:20,386 | INFO     | [payload] validate_pre thread has finished
[2026-02-23 00:35:56] 2026-02-22 23:23:20,428 | INFO     | [data] control thread has finished
[2026-02-23 00:35:56] 2026-02-22 23:23:20,509 | INFO     | [data] copytool_in thread has finished
[2026-02-23 00:35:56] 2026-02-22 23:23:20,526 | INFO     | all job control threads have been joined
[2026-02-23 00:35:56] 2026-02-22 23:23:20,639 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-23 00:35:56] 2026-02-22 23:23:20,689 | INFO     | [payload] failed_post thread has finished
[2026-02-23 00:35:56] 2026-02-22 23:23:20,737 | INFO     | all payload control threads have been joined
[2026-02-23 00:35:56] 2026-02-22 23:23:20,884 | INFO     | [payload] execute_payloads thread has finished
[2026-02-23 00:35:56] 2026-02-22 23:23:21,238 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-23 00:35:56] 2026-02-22 23:23:21,531 | INFO     | [job] control thread has finished
[2026-02-23 00:35:56] 2026-02-22 23:23:21,541 | INFO     | [job] validate thread has finished
[2026-02-23 00:35:56] 2026-02-22 23:23:21,548 | INFO     | [payload] validate_post thread has finished
[2026-02-23 00:35:56] 2026-02-22 23:23:21,742 | INFO     | [payload] control thread has finished
[2026-02-23 00:35:56] 2026-02-22 23:23:21,746 | INFO     | [job] create_data_payload thread has finished
[2026-02-23 00:35:56] 2026-02-22 23:23:22,097 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-23 00:35:56] 2026-02-22 23:23:22,243 | INFO     | [job] queue monitor thread has finished
[2026-02-23 00:35:56] 2026-02-22 23:23:22,644 | INFO     | [data] copytool_out thread has finished
[2026-02-23 00:35:56] 2026-02-22 23:23:26,102 | INFO     | [data] queue_monitor thread has finished
[2026-02-23 00:35:56] 2026-02-22 23:23:29,446 | INFO     | job.realtimelogging is not enabled
[2026-02-23 00:35:56] 2026-02-22 23:23:30,451 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-23 00:35:56] 2026-02-22 23:23:48,761 | INFO     | PID=3977669 has CPU usage=12.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-23 00:35:56] 2026-02-22 23:23:48,761 | INFO     | .. there are 4 such processes running
[2026-02-23 00:35:56] 2026-02-22 23:23:48,763 | INFO     | found 0 job(s) in 20 queues
[2026-02-23 00:35:56] 2026-02-22 23:23:48,763 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-23 00:35:56] 2026-02-22 23:23:48,763 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-23 00:35:56] 2026-02-22 23:23:50,976 | INFO     | [monitor] cgroup control has ended
[2026-02-23 00:35:56] 2026-02-22 23:23:52,172 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23455886661440)>', '<ExcThread(monitor, started 23455646099200)>']
[2026-02-23 00:35:56] 2026-02-22 23:23:52,783 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-23 00:35:56] 2026-02-22 23:23:52,784 | INFO     | [monitor] control thread has ended
[2026-02-23 00:35:56] 2026-02-22 23:23:57,197 | INFO     | all workflow threads have been joined
[2026-02-23 00:35:56] 2026-02-22 23:23:57,198 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-23 00:35:56] 2026-02-22 23:23:57,198 | INFO     | traces error code: 0
[2026-02-23 00:35:56] 2026-02-22 23:23:57,198 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-23 00:35:56] 2026-02-22 23:23:57,373 [wrapper] ==== pilot stdout END ====
[2026-02-23 00:35:56] 2026-02-22 23:23:57,376 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-23 00:35:56] 2026-02-22 23:23:57,379 [wrapper] pilotpid: 3977669
[2026-02-23 00:35:56] 2026-02-22 23:23:57,381 [wrapper] Pilot exit status: 0
[2026-02-23 00:35:56] 2026-02-22 23:23:57,393 [wrapper] pandaids: 7019391705
[2026-02-23 00:35:56] 2026-02-22 23:23:57,485 [wrapper] cleanup supervisor_pilot 4156947 3977670
[2026-02-23 00:35:56] 2026-02-22 23:23:57,488 [wrapper] Test setup, not cleaning
[2026-02-23 00:35:56] 2026-02-22 23:23:57,492 [wrapper] apfmon messages muted
[2026-02-23 00:35:56] 2026-02-22 23:23:57,494 [wrapper] ==== wrapper stdout END ====
[2026-02-23 00:35:56] 2026-02-22 23:23:57,497 [wrapper] ==== wrapper stderr END ====
[2026-02-23 00:35:56]  *** Error codes and diagnostics ***
[2026-02-23 00:35:56]     "exeErrorCode": 0,
[2026-02-23 00:35:56]     "exeErrorDiag": "",
[2026-02-23 00:35:56]     "pilotErrorCode": 0,
[2026-02-23 00:35:56]     "pilotErrorDiag": "",
[2026-02-23 00:35:56]  *** Listing of results directory ***
[2026-02-23 00:35:56] total 943260
[2026-02-23 00:35:56] -rwx------ 1 boinc boinc     36322 Feb 18 13:35 runpilot2-wrapper.sh
[2026-02-23 00:35:56] -rw-r--r-- 1 boinc boinc    584627 Feb 18 13:37 pilot3.tar.gz
[2026-02-23 00:35:56] -rw-r--r-- 1 boinc boinc      5111 Feb 18 13:37 queuedata.json
[2026-02-23 00:35:56] -rw-r--r-- 1 boinc boinc       100 Feb 22 20:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-23 00:35:56] -rwxr-xr-x 1 boinc boinc      7986 Feb 22 20:15 run_atlas
[2026-02-23 00:35:56] -rw-r--r-- 1 boinc boinc       105 Feb 22 20:15 job.xml
[2026-02-23 00:35:56] -rw-r--r-- 1 boinc boinc      6638 Feb 22 20:15 init_data.xml
[2026-02-23 00:35:56] -rw-r--r-- 2 boinc boinc 680599389 Feb 22 20:15 EVNT.48508760._000636.pool.root.1
[2026-02-23 00:35:56] -rw-r--r-- 2 boinc boinc     15845 Feb 22 20:15 start_atlas.sh
[2026-02-23 00:35:56] drwxrwx--x 2 boinc boinc      4096 Feb 22 20:15 shared
[2026-02-23 00:35:56] -rw-r--r-- 2 boinc boinc    597962 Feb 22 20:15 input.tar.gz
[2026-02-23 00:35:56] -rw-r--r-- 1 boinc boinc         0 Feb 22 20:15 boinc_lockfile
[2026-02-23 00:35:56] -rw-r--r-- 1 boinc boinc      2553 Feb 22 20:15 pandaJob.out
[2026-02-23 00:35:56] -rw------- 1 boinc boinc    998264 Feb 22 20:15 agis_schedconf.cvmfs.json
[2026-02-23 00:35:56] -rw------- 1 boinc boinc       451 Feb 22 20:15 workernode_map.json
[2026-02-23 00:35:56] drwx------ 5 boinc boinc      4096 Feb 22 20:15 pilot3
[2026-02-23 00:35:56] -rw------- 1 boinc boinc 276331892 Feb 23 00:22 HITS.48508763._032578.pool.root.1
[2026-02-23 00:35:56] -rw-r--r-- 1 boinc boinc       529 Feb 23 00:22 boinc_task_state.xml
[2026-02-23 00:35:56] -rw------- 1 boinc boinc      1034 Feb 23 00:23 memory_monitor_summary.json
[2026-02-23 00:35:56] -rw------- 1 boinc boinc   1513015 Feb 23 00:23 agis_ddmendpoints.agis.ALL.json
[2026-02-23 00:35:56] -rw------- 1 boinc boinc    437928 Feb 23 00:23 log.48508763._032578.job.log.tgz.1
[2026-02-23 00:35:56] -rw------- 1 boinc boinc      6414 Feb 23 00:23 heartbeat.json
[2026-02-23 00:35:56] -rw------- 1 boinc boinc        95 Feb 23 00:23 pilot_heartbeat.json
[2026-02-23 00:35:56] -rw------- 1 boinc boinc      5192 Feb 23 00:23 pilotlog.txt
[2026-02-23 00:35:56] -rw------- 1 boinc boinc   2083776 Feb 23 00:23 log.48508763._032578.job.log.1
[2026-02-23 00:35:56] -rw------- 1 boinc boinc       357 Feb 23 00:23 output.list
[2026-02-23 00:35:56] -rw-r--r-- 1 boinc boinc       620 Feb 23 00:23 runtime_log
[2026-02-23 00:35:56] -rw------- 1 boinc boinc   2539520 Feb 23 00:23 result.tar.gz
[2026-02-23 00:35:56] -rw------- 1 boinc boinc       666 Feb 23 00:23 vGLMDmaxvC9n9Rq4apOajLDm4fhM0noT9bVooX4SDm7luKDmAd7wWo.diag
[2026-02-23 00:35:56] -rw-r--r-- 1 boinc boinc      9205 Feb 23 00:23 runtime_log.err
[2026-02-23 00:35:56] -rw-r--r-- 1 boinc boinc        26 Feb 23 00:35 wrapper_checkpoint.txt
[2026-02-23 00:35:56] -rw-r--r-- 1 boinc boinc      8192 Feb 23 00:35 boinc_mmap_file
[2026-02-23 00:35:56] -rw-r--r-- 1 boinc boinc     20842 Feb 23 00:35 stderr.txt
[2026-02-23 00:35:56] HITS file was successfully produced:
[2026-02-23 00:35:56] -rw------- 1 boinc boinc 276331892 Feb 23 00:22 shared/HITS.pool.root.1
[2026-02-23 00:35:56]  *** Contents of shared directory: ***
[2026-02-23 00:35:56] total 937592
[2026-02-23 00:35:56] -rw-r--r-- 2 boinc boinc 680599389 Feb 22 20:15 ATLAS.root_0
[2026-02-23 00:35:56] -rw-r--r-- 2 boinc boinc     15845 Feb 22 20:15 start_atlas.sh
[2026-02-23 00:35:56] -rw-r--r-- 2 boinc boinc    597962 Feb 22 20:15 input.tar.gz
[2026-02-23 00:35:56] -rw------- 1 boinc boinc 276331892 Feb 23 00:22 HITS.pool.root.1
[2026-02-23 00:35:56] -rw------- 1 boinc boinc   2539520 Feb 23 00:23 result.tar.gz
00:35:58 (3973420): run_atlas exited; CPU time 57897.210199
00:35:58 (3973420): called boinc_finish(0)

</stderr_txt>
]]>

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