Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
17:59:59 (4175805): wrapper (7.7.26015): starting
17:59:59 (4175805): wrapper: running run_atlas (--nthreads 4)
[2026-02-20 17:59:59] Arguments: --nthreads 4
[2026-02-20 17:59:59] Threads: 4
[2026-02-20 17:59:59] Checking for CVMFS
[2026-02-20 17:59:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-20 17:59:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-20 17:59:59] Running cvmfs_config stat atlas.cern.ch
[2026-02-20 17:59:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-20 17:59:59] 2.13.3.0 11582 6795 46740 156452 1 50 28349051 33554432 0 130560 0 3413578 99.987 256538 244 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-02-20 17:59:59] CVMFS is ok
[2026-02-20 17:59:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-20 17:59:59] Checking for apptainer binary...
[2026-02-20 17:59:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-20 17:59:59] Running /usr/bin/apptainer --version
[2026-02-20 17:59:59] apptainer version 1.4.5
[2026-02-20 17:59:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-20 17:59:59] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-02-20 17:59:59] apptainer works
[2026-02-20 17:59:59] Set ATHENA_PROC_NUMBER=4
[2026-02-20 17:59:59] Set ATHENA_CORE_NUMBER=4
[2026-02-20 17:59:59] Starting ATLAS job with PandaID=7019492740
[2026-02-20 17:59:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-20 19:26:26]  *** The last 200 lines of the pilot log: ***
[2026-02-20 19:26:26]  is_altstaged=None
[2026-02-20 19:26:26]  is_tar=False
[2026-02-20 19:26:26]  lfn=log.48508763._033607.job.log.tgz.1
[2026-02-20 19:26:26]  mtime=0
[2026-02-20 19:26:26]  protocol_id=None
[2026-02-20 19:26:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-20 19:26:26]  replicas=None
[2026-02-20 19:26:26]  scope=mc23_13p6TeV
[2026-02-20 19:26:26]  status=None
[2026-02-20 19:26:26]  status_code=0
[2026-02-20 19:26:26]  storage_token=
[2026-02-20 19:26:26]  surl=/home/ek/BOINC/slots/0/PanDA_Pilot-7019492740/log.48508763._033607.job.log.tgz.1
[2026-02-20 19:26:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/57/log.48508763._033607.job.log.tgz.1
[2026-02-20 19:26:26]  workdir=None
[2026-02-20 19:26:26] ]
[2026-02-20 19:26:26] 2026-02-20 17:25:55,000 | INFO     | transferring file log.48508763._033607.job.log.tgz.1 from /home/ek/BOINC/slots/0/PanDA_Pilot-7019492740/log.48508763._033607.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-02-20 19:26:26] 2026-02-20 17:25:55,000 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/0/PanDA_Pilot-7019492740/log.48508763._033607.job.log.tgz.1 /home/ek/BOINC/slots/0/log.48508763._033607.job
[2026-02-20 19:26:26] 2026-02-20 17:25:55,009 | INFO     | adding to output.list: log.48508763._033607.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/57/log.48508763._033607.job.log.tg
[2026-02-20 19:26:26] 2026-02-20 17:25:55,009 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-20 19:26:26] 2026-02-20 17:25:55,009 | INFO     | summary of transferred files:
[2026-02-20 19:26:26] 2026-02-20 17:25:55,009 | INFO     |  -- lfn=log.48508763._033607.job.log.tgz.1, status_code=0, status=transferred
[2026-02-20 19:26:26] 2026-02-20 17:25:55,009 | INFO     | stage-out finished correctly
[2026-02-20 19:26:26] 2026-02-20 17:25:55,034 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-20 19:26:26] 2026-02-20 17:25:55,059 | INFO     | job 7019492740 has state=finished
[2026-02-20 19:26:26] 2026-02-20 17:25:55,059 | INFO     | preparing for final server update for job 7019492740 in state='finished'
[2026-02-20 19:26:26] 2026-02-20 17:25:55,059 | INFO     | reading metadata from: /home/ek/BOINC/slots/0/PanDA_Pilot-7019492740/jobReport.json
[2026-02-20 19:26:26] 2026-02-20 17:25:55,060 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/0/workernode_map.json
[2026-02-20 19:26:26] 2026-02-20 17:25:55,060 | INFO     | this job has now completed (state=finished)
[2026-02-20 19:26:26] 2026-02-20 17:25:55,060 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-20 19:26:26] 2026-02-20 17:25:55,060 | INFO     | log transfer has been attempted: DONE
[2026-02-20 19:26:26] 2026-02-20 17:25:55,060 | INFO     | job 7019492740 has finished - writing final server update
[2026-02-20 19:26:26] 2026-02-20 17:25:55,060 | INFO     | total number of processed events: 400 (read)
[2026-02-20 19:26:26] 2026-02-20 17:25:55,062 | INFO     | using path: /home/ek/BOINC/slots/0/PanDA_Pilot-7019492740/memory_monitor_summary.json (trf name=prmon)
[2026-02-20 19:26:26] 2026-02-20 17:25:55,062 | INFO     | extracted standard info from prmon json
[2026-02-20 19:26:26] 2026-02-20 17:25:55,062 | INFO     | extracted standard memory fields from prmon json
[2026-02-20 19:26:26] 2026-02-20 17:25:55,062 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-20 19:26:26] 2026-02-20 17:25:55,063 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-20 19:26:26] 2026-02-20 17:25:55,063 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-20 19:26:26] 2026-02-20 17:25:55,063 | INFO     | fitting pss+swap vs Time
[2026-02-20 19:26:26] 2026-02-20 17:25:55,063 | INFO     | sum of square deviations: 147126479.5
[2026-02-20 19:26:26] 2026-02-20 17:25:55,063 | INFO     | sum of deviations: -7007640776.999999
[2026-02-20 19:26:26] 2026-02-20 17:25:55,063 | INFO     | mean x: 1771605875.5
[2026-02-20 19:26:26] 2026-02-20 17:25:55,064 | INFO     | mean y: 2467773.5384615385
[2026-02-20 19:26:26] 2026-02-20 17:25:55,064 | INFO     | intersect: 84384134595.97191
[2026-02-20 19:26:26] 2026-02-20 17:25:55,064 | INFO     | chi2: 0.1387986823907458
[2026-02-20 19:26:26] 2026-02-20 17:25:55,064 | INFO     | current memory leak: -47.63 B/s (using 78 data points, chi2=0.14)
[2026-02-20 19:26:26] 2026-02-20 17:25:55,064 | INFO     | could have reported an average CPU frequency of 3712 MHz (6 samples)
[2026-02-20 19:26:26] 2026-02-20 17:25:55,064 | INFO     | ..............................
[2026-02-20 19:26:26] 2026-02-20 17:25:55,064 | INFO     | . Timing measurements:
[2026-02-20 19:26:26] 2026-02-20 17:25:55,064 | INFO     | . get job = 0 s
[2026-02-20 19:26:26] 2026-02-20 17:25:55,064 | INFO     | . initial setup = 3 s
[2026-02-20 19:26:26] 2026-02-20 17:25:55,064 | INFO     | . payload setup = 2 s
[2026-02-20 19:26:26] 2026-02-20 17:25:55,064 | INFO     | . stage-in = 0 s
[2026-02-20 19:26:26] 2026-02-20 17:25:55,064 | INFO     | . payload execution = 5131 s
[2026-02-20 19:26:26] 2026-02-20 17:25:55,064 | INFO     | . stage-out = 0 s
[2026-02-20 19:26:26] 2026-02-20 17:25:55,064 | INFO     | . log creation = 0 s
[2026-02-20 19:26:26] 2026-02-20 17:25:55,064 | INFO     | ..............................
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | 
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | job summary report
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | --------------------------------------------------
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | PanDA job id: 7019492740
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | task id: 48508763
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | errors: (none)
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | pilot state: finished 
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | transexitcode: 0
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | exeerrorcode: 0
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | exeerrordiag: 
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | exitcode: 0
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | exitmsg: OK
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | cpuconsumptiontime: 19717 s
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | nevents: 400
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | neventsw: 0
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | pid: 4184334
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | pgrp: 4184334
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | corecount: 4
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | event service: False
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | sizes: {0: 2281992, 1: 2282254, 11: 2282282, 5137: 2308779, 5138: 2317971}
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | --------------------------------------------------
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | 
[2026-02-20 19:26:26] 2026-02-20 17:25:55,091 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/0
[2026-02-20 19:26:26] 2026-02-20 17:25:55,100 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-20 19:26:26] 2026-02-20 17:25:55,100 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-20 19:26:26] 2026-02-20 17:25:55,100 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-20 19:26:26] 2026-02-20 17:25:55,100 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-20 19:26:26] 2026-02-20 17:25:55,100 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-20 19:26:26] 2026-02-20 17:25:55,100 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-20 19:26:26] 2026-02-20 17:25:55,100 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-20 19:26:26] 2026-02-20 17:25:55,100 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-20 19:26:26] 2026-02-20 17:25:55,100 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-20 19:26:26] 2026-02-20 17:25:55,100 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-20 19:26:26] 2026-02-20 17:25:55,100 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-20 19:26:26] 2026-02-20 17:25:55,100 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-20 19:26:26] 2026-02-20 17:25:55,100 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-20 19:26:26] 2026-02-20 17:25:55,100 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-20 19:26:26] 2026-02-20 17:25:55,100 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-20 19:26:26] 2026-02-20 17:25:55,100 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-20 19:26:26] 2026-02-20 17:25:55,100 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-20 19:26:26] 2026-02-20 17:25:55,100 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-20 19:26:26] 2026-02-20 17:25:55,100 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-20 19:26:26] 2026-02-20 17:25:55,100 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-20 19:26:26] 2026-02-20 17:25:55,100 | INFO     | job 7019492740 has completed (purged errors)
[2026-02-20 19:26:26] 2026-02-20 17:25:55,100 | INFO     | overall cleanup function is called
[2026-02-20 19:26:26] 2026-02-20 17:25:56,107 | INFO     | --- collectZombieJob: --- 10, [4184334]
[2026-02-20 19:26:26] 2026-02-20 17:25:56,107 | INFO     | zombie collector waiting for pid 4184334
[2026-02-20 19:26:26] 2026-02-20 17:25:56,107 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-20 19:26:26] 2026-02-20 17:25:56,107 | INFO     | collected zombie processes
[2026-02-20 19:26:26] 2026-02-20 17:25:56,107 | INFO     | will attempt to kill all subprocesses of pid=4184334
[2026-02-20 19:26:26] 2026-02-20 17:25:56,192 | INFO     | process IDs to be killed: [4184334] (in reverse order)
[2026-02-20 19:26:26] 2026-02-20 17:25:56,221 | WARNING  | found no corresponding commands to process id(s)
[2026-02-20 19:26:26] 2026-02-20 17:25:56,221 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-20 19:26:26] 2026-02-20 17:25:56,223 | INFO     | did not find any defunct processes belonging to 4184334
[2026-02-20 19:26:26] 2026-02-20 17:25:56,225 | INFO     | did not find any defunct processes belonging to 4184334
[2026-02-20 19:26:26] 2026-02-20 17:25:56,226 | INFO     | ready for new job
[2026-02-20 19:26:26] 2026-02-20 17:25:56,226 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-20 19:26:26] 2026-02-20 17:25:56,226 | INFO     | **************************************
[2026-02-20 19:26:26] 2026-02-20 17:25:56,226 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-20 19:26:26] 2026-02-20 17:25:56,226 | INFO     | **************************************
[2026-02-20 19:26:26] 2026-02-20 17:25:56,226 | INFO     | 
[2026-02-20 19:26:26] 2026-02-20 17:25:56,227 | INFO     | architecture information:
[2026-02-20 19:26:26] 2026-02-20 17:25:56,227 | INFO     | executing command: cat /etc/os-release
[2026-02-20 19:26:26] 2026-02-20 17:25:56,233 | INFO     | cat /etc/os-release:
[2026-02-20 19:26:26] NAME="CentOS Linux"
[2026-02-20 19:26:26] VERSION="7 (Core)"
[2026-02-20 19:26:26] ID="centos"
[2026-02-20 19:26:26] ID_LIKE="rhel fedora"
[2026-02-20 19:26:26] VERSION_ID="7"
[2026-02-20 19:26:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-20 19:26:26] ANSI_COLOR="0;31"
[2026-02-20 19:26:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-20 19:26:26] HOME_URL="https://www.centos.org/"
[2026-02-20 19:26:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-20 19:26:26] 
[2026-02-20 19:26:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-20 19:26:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-20 19:26:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-20 19:26:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-20 19:26:26] 
[2026-02-20 19:26:26] 2026-02-20 17:25:56,233 | INFO     | **************************************
[2026-02-20 19:26:26] 2026-02-20 17:25:56,736 | INFO     | executing command: df -mP /home/ek/BOINC/slots/0
[2026-02-20 19:26:26] 2026-02-20 17:25:56,743 | INFO     | sufficient remaining disk space (59105083392 B)
[2026-02-20 19:26:26] 2026-02-20 17:25:56,743 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-20 19:26:26] 2026-02-20 17:25:56,743 | INFO     | current server update state: UPDATING_FINAL
[2026-02-20 19:26:26] 2026-02-20 17:25:56,743 | INFO     | update_server=False
[2026-02-20 19:26:26] 2026-02-20 17:25:56,743 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-20 19:26:26] 2026-02-20 17:25:56,743 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-20 19:26:26] 2026-02-20 17:25:56,743 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-20 19:26:26] 2026-02-20 17:25:56,825 | INFO     | all data control threads have been joined
[2026-02-20 19:26:26] 2026-02-20 17:25:57,697 | INFO     | all payload control threads have been joined
[2026-02-20 19:26:26] 2026-02-20 17:25:57,748 | INFO     | [job] retrieve thread has finished
[2026-02-20 19:26:26] 2026-02-20 17:25:57,749 | INFO     | [job] queue monitor thread has finished
[2026-02-20 19:26:26] 2026-02-20 17:25:57,828 | INFO     | [data] control thread has finished
[2026-02-20 19:26:26] 2026-02-20 17:25:58,040 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-20 19:26:26] 2026-02-20 17:25:58,177 | INFO     | all job control threads have been joined
[2026-02-20 19:26:26] 2026-02-20 17:25:58,476 | INFO     | [payload] failed_post thread has finished
[2026-02-20 19:26:26] 2026-02-20 17:25:58,490 | INFO     | [payload] execute_payloads thread has finished
[2026-02-20 19:26:26] 2026-02-20 17:25:58,701 | INFO     | [payload] control thread has finished
[2026-02-20 19:26:26] 2026-02-20 17:25:58,884 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-20 19:26:26] 2026-02-20 17:25:58,886 | INFO     | [payload] validate_post thread has finished
[2026-02-20 19:26:26] 2026-02-20 17:25:58,930 | INFO     | [job] validate thread has finished
[2026-02-20 19:26:26] 2026-02-20 17:25:59,070 | INFO     | [payload] validate_pre thread has finished
[2026-02-20 19:26:26] 2026-02-20 17:25:59,182 | INFO     | [job] control thread has finished
[2026-02-20 19:26:26] 2026-02-20 17:25:59,200 | INFO     | [job] create_data_payload thread has finished
[2026-02-20 19:26:26] 2026-02-20 17:25:59,219 | INFO     | [data] copytool_in thread has finished
[2026-02-20 19:26:26] 2026-02-20 17:25:59,869 | WARNING  | process 4184334 can no longer be monitored (due to stat problems) - aborting
[2026-02-20 19:26:26] 2026-02-20 17:25:59,926 | INFO     | using path: /home/ek/BOINC/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-20 19:26:26] 2026-02-20 17:25:59,926 | INFO     | using path: /home/ek/BOINC/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-20 19:26:26] 2026-02-20 17:25:59,927 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-20 19:26:26] 2026-02-20 17:25:59,927 | WARNING  | maxPSS not found in memory monitor output
[2026-02-20 19:26:26] 2026-02-20 17:26:00,007 | INFO     | number of running child processes to parent process 4184334: 1
[2026-02-20 19:26:26] 2026-02-20 17:26:00,007 | INFO     | maximum number of monitored processes: 6
[2026-02-20 19:26:26] 2026-02-20 17:26:00,007 | INFO     | aborting job monitoring since job object (job id=7019492740) has expired
[2026-02-20 19:26:26] 2026-02-20 17:26:00,007 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-20 19:26:26] 2026-02-20 17:26:00,007 | INFO     | will abort loop
[2026-02-20 19:26:26] 2026-02-20 17:26:00,045 | INFO     | [data] copytool_out thread has finished
[2026-02-20 19:26:26] 2026-02-20 17:26:00,749 | INFO     | [data] queue_monitor thread has finished
[2026-02-20 19:26:26] 2026-02-20 17:26:01,012 | INFO     | [job] job monitor thread has finished
[2026-02-20 19:26:26] 2026-02-20 17:26:13,474 | INFO     | [monitor] cgroup control has ended
[2026-02-20 19:26:26] 2026-02-20 17:26:14,468 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139825686439744)>', '<ExcThread(monitor, started 139825067845376)>']
[2026-02-20 19:26:26] 2026-02-20 17:26:19,493 | INFO     | all workflow threads have been joined
[2026-02-20 19:26:26] 2026-02-20 17:26:19,493 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-20 19:26:26] 2026-02-20 17:26:19,493 | INFO     | traces error code: 0
[2026-02-20 19:26:26] 2026-02-20 17:26:19,493 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-20 19:26:26] 2026-02-20 17:26:26,583 | INFO     | PID=4179651 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-20 19:26:26] 2026-02-20 17:26:26,584 | INFO     | found 0 job(s) in 20 queues
[2026-02-20 19:26:26] 2026-02-20 17:26:26,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-20 19:26:26] 2026-02-20 17:26:26,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-20 19:26:26] 2026-02-20 17:26:26,584 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-20 19:26:26] 2026-02-20 17:26:26,584 | CRITICAL | thread 'MainThread' is not alive
[2026-02-20 19:26:26] 2026-02-20 17:26:26,584 | INFO     | [monitor] control thread has ended
[2026-02-20 19:26:26] 2026-02-20 17:26:26,623 [wrapper] ==== pilot stdout END ====
[2026-02-20 19:26:26] 2026-02-20 17:26:26,624 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-20 19:26:26] 2026-02-20 17:26:26,626 [wrapper] pilotpid: 4179651
[2026-02-20 19:26:26] 2026-02-20 17:26:26,627 [wrapper] Pilot exit status: 0
[2026-02-20 19:26:26] 2026-02-20 17:26:26,632 [wrapper] pandaids: 7019492740
[2026-02-20 19:26:26] 2026-02-20 17:26:26,652 [wrapper] cleanup supervisor_pilot   49111 4179652
[2026-02-20 19:26:26] 2026-02-20 17:26:26,654 [wrapper] Test setup, not cleaning
[2026-02-20 19:26:26] 2026-02-20 17:26:26,655 [wrapper] apfmon messages muted
[2026-02-20 19:26:26] 2026-02-20 17:26:26,656 [wrapper] ==== wrapper stdout END ====
[2026-02-20 19:26:26] 2026-02-20 17:26:26,658 [wrapper] ==== wrapper stderr END ====
[2026-02-20 19:26:26]  *** Error codes and diagnostics ***
[2026-02-20 19:26:26]     "exeErrorCode": 0,
[2026-02-20 19:26:26]     "exeErrorDiag": "",
[2026-02-20 19:26:26]     "pilotErrorCode": 0,
[2026-02-20 19:26:26]     "pilotErrorDiag": "",
[2026-02-20 19:26:26]  *** Listing of results directory ***
[2026-02-20 19:26:26] total 939304
[2026-02-20 19:26:26] -rwx------ 1 ek ek     36322 Feb 18 14:36 runpilot2-wrapper.sh
[2026-02-20 19:26:26] -rw-r--r-- 1 ek ek    584627 Feb 18 14:37 pilot3.tar.gz
[2026-02-20 19:26:26] -rw-r--r-- 1 ek ek      5111 Feb 18 14:40 queuedata.json
[2026-02-20 19:26:26] -rw-rw-r-- 1 ek ek       100 Feb 20 17:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-20 19:26:26] -rwxr-xr-x 1 ek ek      7986 Feb 20 17:59 run_atlas
[2026-02-20 19:26:26] -rw-rw-r-- 1 ek ek       105 Feb 20 17:59 job.xml
[2026-02-20 19:26:26] -rw-r--r-- 2 ek ek 671565341 Feb 20 17:59 EVNT.48508760._000656.pool.root.1
[2026-02-20 19:26:26] -rw-r--r-- 2 ek ek    597950 Feb 20 17:59 input.tar.gz
[2026-02-20 19:26:26] -rw-r--r-- 2 ek ek     15845 Feb 20 17:59 start_atlas.sh
[2026-02-20 19:26:26] drwxrwx--x 2 ek ek      4096 Feb 20 17:59 shared
[2026-02-20 19:26:26] -rw-rw-r-- 1 ek ek         0 Feb 20 17:59 boinc_setup_complete
[2026-02-20 19:26:26] -rw-rw-r-- 1 ek ek      9842 Feb 20 17:59 init_data.xml
[2026-02-20 19:26:26] -rw-rw-r-- 1 ek ek         0 Feb 20 17:59 boinc_lockfile
[2026-02-20 19:26:26] -rw-rw-r-- 1 ek ek      2548 Feb 20 17:59 pandaJob.out
[2026-02-20 19:26:26] -rw------- 1 ek ek        50 Feb 20 17:59 setup.sh.local
[2026-02-20 19:26:26] -rw------- 1 ek ek   1001572 Feb 20 18:00 agis_schedconf.cvmfs.json
[2026-02-20 19:26:26] -rw------- 1 ek ek   1513015 Feb 20 18:00 agis_ddmendpoints.agis.ALL.json
[2026-02-20 19:26:26] -rw------- 1 ek ek       432 Feb 20 18:00 workernode_map.json
[2026-02-20 19:26:26] drwx------ 5 ek ek      4096 Feb 20 18:00 pilot3
[2026-02-20 19:26:26] -rw------- 1 ek ek 284331805 Feb 20 19:25 HITS.48508763._033607.pool.root.1
[2026-02-20 19:26:26] -rw------- 1 ek ek        95 Feb 20 19:25 pilot_heartbeat.json
[2026-02-20 19:26:26] -rw------- 1 ek ek      1034 Feb 20 19:25 memory_monitor_summary.json
[2026-02-20 19:26:26] -rw------- 1 ek ek    258552 Feb 20 19:25 log.48508763._033607.job.log.tgz.1
[2026-02-20 19:26:26] -rw------- 1 ek ek      6334 Feb 20 19:25 heartbeat.json
[2026-02-20 19:26:26] -rw-rw-r-- 1 ek ek      8192 Feb 20 19:25 boinc_mmap_file
[2026-02-20 19:26:26] -rw-rw-r-- 1 ek ek        27 Feb 20 19:25 wrapper_checkpoint.txt
[2026-02-20 19:26:26] -rw-rw-r-- 1 ek ek       530 Feb 20 19:26 boinc_task_state.xml
[2026-02-20 19:26:26] -rw------- 1 ek ek       817 Feb 20 19:26 pilotlog.txt
[2026-02-20 19:26:26] -rw------- 1 ek ek    749351 Feb 20 19:26 log.48508763._033607.job.log.1
[2026-02-20 19:26:26] -rw------- 1 ek ek       357 Feb 20 19:26 output.list
[2026-02-20 19:26:26] -rw-rw-r-- 1 ek ek       620 Feb 20 19:26 runtime_log
[2026-02-20 19:26:26] -rw------- 1 ek ek   1024000 Feb 20 19:26 result.tar.gz
[2026-02-20 19:26:26] -rw-rw-r-- 1 ek ek      9501 Feb 20 19:26 runtime_log.err
[2026-02-20 19:26:26] -rw------- 1 ek ek       664 Feb 20 19:26 fyMMDmFyvC9n9Rq4apOajLDm4fhM0noT9bVooX4SDm7quKDmDkR8Gm.diag
[2026-02-20 19:26:26] -rw-rw-r-- 1 ek ek     21326 Feb 20 19:26 stderr.txt
[2026-02-20 19:26:26] HITS file was successfully produced:
[2026-02-20 19:26:26] -rw------- 1 ek ek 284331805 Feb 20 19:25 shared/HITS.pool.root.1
[2026-02-20 19:26:26]  *** Contents of shared directory: ***
[2026-02-20 19:26:26] total 935104
[2026-02-20 19:26:26] -rw-r--r-- 2 ek ek 671565341 Feb 20 17:59 ATLAS.root_0
[2026-02-20 19:26:26] -rw-r--r-- 2 ek ek    597950 Feb 20 17:59 input.tar.gz
[2026-02-20 19:26:26] -rw-r--r-- 2 ek ek     15845 Feb 20 17:59 start_atlas.sh
[2026-02-20 19:26:26] -rw------- 1 ek ek 284331805 Feb 20 19:25 HITS.pool.root.1
[2026-02-20 19:26:26] -rw------- 1 ek ek   1024000 Feb 20 19:26 result.tar.gz
19:26:28 (4175805): run_atlas exited; CPU time 19763.877883
19:26:28 (4175805): called boinc_finish(0)

</stderr_txt>
]]>

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