Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
21:21:22 (3268617): wrapper (7.7.26015): starting
21:21:22 (3268617): wrapper: running run_atlas (--nthreads 12)
[2026-02-18 21:21:22] Arguments: --nthreads 12
[2026-02-18 21:21:22] Threads: 12
[2026-02-18 21:21:22] Checking for CVMFS
[2026-02-18 21:21:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-18 21:21:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-18 21:21:23] Running cvmfs_config stat atlas.cern.ch
[2026-02-18 21:21:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-18 21:21:24] 2.11.0.0 2741029 158 60888 156382 2 50 3956901 6144000 14768 130560 0 1332915 99.998 8276 381 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-02-18 21:21:24] CVMFS is ok
[2026-02-18 21:21:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-18 21:21:24] Checking for apptainer binary...
[2026-02-18 21:21:24] apptainer is not installed, using version from CVMFS
[2026-02-18 21:21:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-18 21:21:24] radiat0r
[2026-02-18 21:21:24] apptainer works
[2026-02-18 21:21:24] Set ATHENA_PROC_NUMBER=12
[2026-02-18 21:21:24] Set ATHENA_CORE_NUMBER=12
[2026-02-18 21:21:24] Starting ATLAS job with PandaID=7018296851
[2026-02-18 21:21:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-18 22:41:59]  *** The last 200 lines of the pilot log: ***
[2026-02-18 22:41:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/46/log.48508763._019193.job.log.tgz.1
[2026-02-18 22:41:59]  workdir=None
[2026-02-18 22:41:59] ]
[2026-02-18 22:41:59] 2026-02-18 22:41:19,440 | INFO     | transferring file log.48508763._019193.job.log.tgz.1 from /var/lib/boinc/slots/20/PanDA_Pilot-7018296851/log.48508763._019193.job.log.tgz.1 to /var/lib/boinc/slots
[2026-02-18 22:41:59] 2026-02-18 22:41:19,440 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/20/PanDA_Pilot-7018296851/log.48508763._019193.job.log.tgz.1 /var/lib/boinc/slots/20/log.48508763._019193.j
[2026-02-18 22:41:59] 2026-02-18 22:41:19,455 | WARNING  | process 3279214 can no longer be monitored (due to stat problems) - aborting
[2026-02-18 22:41:59] 2026-02-18 22:41:19,456 | INFO     | using path: /var/lib/boinc/slots/20/PanDA_Pilot-7018296851/memory_monitor_summary.json (trf name=prmon)
[2026-02-18 22:41:59] 2026-02-18 22:41:19,457 | INFO     | using path: /var/lib/boinc/slots/20/PanDA_Pilot-7018296851/memory_monitor_summary.json (trf name=prmon)
[2026-02-18 22:41:59] 2026-02-18 22:41:19,457 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-18 22:41:59] 2026-02-18 22:41:19,457 | WARNING  | maxPSS not found in memory monitor output
[2026-02-18 22:41:59] 2026-02-18 22:41:19,458 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3959703 B
[2026-02-18 22:41:59] 2026-02-18 22:41:19,458 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16078 B
[2026-02-18 22:41:59] 2026-02-18 22:41:19,458 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2026-02-18 22:41:59] 2026-02-18 22:41:19,466 | INFO     | adding to output.list: log.48508763._019193.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/46/log.48508763._019193.job.log.tg
[2026-02-18 22:41:59] 2026-02-18 22:41:19,468 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-18 22:41:59] 2026-02-18 22:41:19,468 | INFO     | summary of transferred files:
[2026-02-18 22:41:59] 2026-02-18 22:41:19,468 | INFO     |  -- lfn=log.48508763._019193.job.log.tgz.1, status_code=0, status=transferred
[2026-02-18 22:41:59] 2026-02-18 22:41:19,469 | INFO     | stage-out finished correctly
[2026-02-18 22:41:59] 2026-02-18 22:41:19,497 | INFO     | sufficient remaining disk space (1688632033280 B)
[2026-02-18 22:41:59] 2026-02-18 22:41:19,513 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-02-18 22:41:59] 2026-02-18 22:41:19,537 | INFO     | size of work directory /var/lib/boinc/slots/20/PanDA_Pilot-7018296851: 4259340 B (within 5033164800 B limit)
[2026-02-18 22:41:59] 2026-02-18 22:41:19,537 | INFO     | pfn file=/var/lib/boinc/slots/20/PanDA_Pilot-7018296851/HITS.48508763._019193.pool.root.1 does not exist (skip from workdir size calculation)
[2026-02-18 22:41:59] 2026-02-18 22:41:19,537 | INFO     | total size of present files: 0 B (workdir size: 4259340 B)
[2026-02-18 22:41:59] 2026-02-18 22:41:19,537 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/20/PanDA_Pilot-7018296851/HITS.48508763._019193.pool.root.1 since it does not exist
[2026-02-18 22:41:59] 2026-02-18 22:41:20,032 | INFO     | number of running child processes to parent process 3279214: 1
[2026-02-18 22:41:59] 2026-02-18 22:41:20,032 | INFO     | maximum number of monitored processes: 6
[2026-02-18 22:41:59] 2026-02-18 22:41:21,074 | INFO     | time since job start (4775s) is within the limit (349056.0s)
[2026-02-18 22:41:59] 2026-02-18 22:41:22,261 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-18 22:41:59] 2026-02-18 22:41:22,536 | INFO     | monitor loop #331: job 0:7018296851 is in state 'finished'
[2026-02-18 22:41:59] 2026-02-18 22:41:22,536 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-18 22:41:59] 2026-02-18 22:41:23,080 | INFO     | time since job start (4777s) is within the limit (349056.0s)
[2026-02-18 22:41:59] 2026-02-18 22:41:23,718 | INFO     | job 7018296851 has state=finished
[2026-02-18 22:41:59] 2026-02-18 22:41:23,721 | INFO     | preparing for final server update for job 7018296851 in state='finished'
[2026-02-18 22:41:59] 2026-02-18 22:41:23,721 | INFO     | reading metadata from: /var/lib/boinc/slots/20/PanDA_Pilot-7018296851/jobReport.json
[2026-02-18 22:41:59] 2026-02-18 22:41:23,724 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/20/workernode_map.json
[2026-02-18 22:41:59] 2026-02-18 22:41:23,724 | INFO     | this job has now completed (state=finished)
[2026-02-18 22:41:59] 2026-02-18 22:41:23,724 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-18 22:41:59] 2026-02-18 22:41:23,724 | INFO     | log transfer has been attempted: DONE
[2026-02-18 22:41:59] 2026-02-18 22:41:23,724 | INFO     | job 7018296851 has finished - writing final server update
[2026-02-18 22:41:59] 2026-02-18 22:41:23,724 | INFO     | total number of processed events: 400 (read)
[2026-02-18 22:41:59] 2026-02-18 22:41:23,781 | INFO     | using path: /var/lib/boinc/slots/20/PanDA_Pilot-7018296851/memory_monitor_summary.json (trf name=prmon)
[2026-02-18 22:41:59] 2026-02-18 22:41:23,782 | INFO     | extracted standard info from prmon json
[2026-02-18 22:41:59] 2026-02-18 22:41:23,782 | INFO     | extracted standard memory fields from prmon json
[2026-02-18 22:41:59] 2026-02-18 22:41:23,782 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-18 22:41:59] 2026-02-18 22:41:23,782 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-18 22:41:59] 2026-02-18 22:41:23,782 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-18 22:41:59] 2026-02-18 22:41:23,783 | INFO     | fitting pss+swap vs Time
[2026-02-18 22:41:59] 2026-02-18 22:41:23,783 | INFO     | sum of square deviations: 110960220.0
[2026-02-18 22:41:59] 2026-02-18 22:41:23,783 | INFO     | sum of deviations: 277076518.0
[2026-02-18 22:41:59] 2026-02-18 22:41:23,783 | INFO     | mean x: 1771452173.0
[2026-02-18 22:41:59] 2026-02-18 22:41:23,784 | INFO     | mean y: 2768906.1549295774
[2026-02-18 22:41:59] 2026-02-18 22:41:23,784 | INFO     | intersect: -4420688436.470866
[2026-02-18 22:41:59] 2026-02-18 22:41:23,784 | INFO     | chi2: 0.0024676842924957064
[2026-02-18 22:41:59] 2026-02-18 22:41:23,784 | INFO     | current memory leak: 2.50 B/s (using 71 data points, chi2=0.00)
[2026-02-18 22:41:59] 2026-02-18 22:41:23,784 | INFO     | could have reported an average CPU frequency of 2351 MHz (6 samples)
[2026-02-18 22:41:59] 2026-02-18 22:41:23,784 | INFO     | ..............................
[2026-02-18 22:41:59] 2026-02-18 22:41:23,784 | INFO     | . Timing measurements:
[2026-02-18 22:41:59] 2026-02-18 22:41:23,784 | INFO     | . get job = 0 s
[2026-02-18 22:41:59] 2026-02-18 22:41:23,784 | INFO     | . initial setup = 8 s
[2026-02-18 22:41:59] 2026-02-18 22:41:23,784 | INFO     | . payload setup = 7 s
[2026-02-18 22:41:59] 2026-02-18 22:41:23,784 | INFO     | . stage-in = 0 s
[2026-02-18 22:41:59] 2026-02-18 22:41:23,784 | INFO     | . payload execution = 4748 s
[2026-02-18 22:41:59] 2026-02-18 22:41:23,784 | INFO     | . stage-out = 1 s
[2026-02-18 22:41:59] 2026-02-18 22:41:23,784 | INFO     | . log creation = 0 s
[2026-02-18 22:41:59] 2026-02-18 22:41:23,784 | INFO     | ..............................
[2026-02-18 22:41:59] 2026-02-18 22:41:23,861 | INFO     | 
[2026-02-18 22:41:59] 2026-02-18 22:41:23,861 | INFO     | job summary report
[2026-02-18 22:41:59] 2026-02-18 22:41:23,861 | INFO     | --------------------------------------------------
[2026-02-18 22:41:59] 2026-02-18 22:41:23,861 | INFO     | PanDA job id: 7018296851
[2026-02-18 22:41:59] 2026-02-18 22:41:23,862 | INFO     | task id: 48508763
[2026-02-18 22:41:59] 2026-02-18 22:41:23,862 | INFO     | errors: (none)
[2026-02-18 22:41:59] 2026-02-18 22:41:23,862 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-18 22:41:59] 2026-02-18 22:41:23,862 | INFO     | pilot state: finished 
[2026-02-18 22:41:59] 2026-02-18 22:41:23,862 | INFO     | transexitcode: 0
[2026-02-18 22:41:59] 2026-02-18 22:41:23,862 | INFO     | exeerrorcode: 0
[2026-02-18 22:41:59] 2026-02-18 22:41:23,862 | INFO     | exeerrordiag: 
[2026-02-18 22:41:59] 2026-02-18 22:41:23,862 | INFO     | exitcode: 0
[2026-02-18 22:41:59] 2026-02-18 22:41:23,862 | INFO     | exitmsg: OK
[2026-02-18 22:41:59] 2026-02-18 22:41:23,862 | INFO     | cpuconsumptiontime: 53025 s
[2026-02-18 22:41:59] 2026-02-18 22:41:23,862 | INFO     | nevents: 400
[2026-02-18 22:41:59] 2026-02-18 22:41:23,862 | INFO     | neventsw: 0
[2026-02-18 22:41:59] 2026-02-18 22:41:23,863 | INFO     | pid: 3279214
[2026-02-18 22:41:59] 2026-02-18 22:41:23,863 | INFO     | pgrp: 3279214
[2026-02-18 22:41:59] 2026-02-18 22:41:23,863 | INFO     | corecount: 12
[2026-02-18 22:41:59] 2026-02-18 22:41:23,863 | INFO     | event service: False
[2026-02-18 22:41:59] 2026-02-18 22:41:23,863 | INFO     | sizes: {0: 2282260, 11: 2282260, 4759: 2308716, 4760: 2308715, 4761: 2317771, 4764: 2317855, 4766: 2318177}
[2026-02-18 22:41:59] 2026-02-18 22:41:23,863 | INFO     | --------------------------------------------------
[2026-02-18 22:41:59] 2026-02-18 22:41:23,863 | INFO     | 
[2026-02-18 22:41:59] 2026-02-18 22:41:23,863 | INFO     | executing command: ls -lF /var/lib/boinc/slots/20
[2026-02-18 22:41:59] 2026-02-18 22:41:23,891 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-18 22:41:59] 2026-02-18 22:41:23,892 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-18 22:41:59] 2026-02-18 22:41:23,892 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-18 22:41:59] 2026-02-18 22:41:23,892 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-18 22:41:59] 2026-02-18 22:41:23,892 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-18 22:41:59] 2026-02-18 22:41:23,892 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-18 22:41:59] 2026-02-18 22:41:23,892 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-18 22:41:59] 2026-02-18 22:41:23,892 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-18 22:41:59] 2026-02-18 22:41:23,892 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-18 22:41:59] 2026-02-18 22:41:23,892 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-18 22:41:59] 2026-02-18 22:41:23,892 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-18 22:41:59] 2026-02-18 22:41:23,892 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-18 22:41:59] 2026-02-18 22:41:23,892 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-18 22:41:59] 2026-02-18 22:41:23,892 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-18 22:41:59] 2026-02-18 22:41:23,892 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-18 22:41:59] 2026-02-18 22:41:23,893 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-18 22:41:59] 2026-02-18 22:41:23,893 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-18 22:41:59] 2026-02-18 22:41:23,893 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-18 22:41:59] 2026-02-18 22:41:23,893 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-18 22:41:59] 2026-02-18 22:41:23,893 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-18 22:41:59] 2026-02-18 22:41:23,893 | INFO     | job 7018296851 has completed (purged errors)
[2026-02-18 22:41:59] 2026-02-18 22:41:23,893 | INFO     | overall cleanup function is called
[2026-02-18 22:41:59] 2026-02-18 22:41:24,900 | INFO     | --- collectZombieJob: --- 10, [3279214]
[2026-02-18 22:41:59] 2026-02-18 22:41:24,900 | INFO     | zombie collector waiting for pid 3279214
[2026-02-18 22:41:59] 2026-02-18 22:41:24,900 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-18 22:41:59] 2026-02-18 22:41:24,900 | INFO     | collected zombie processes
[2026-02-18 22:41:59] 2026-02-18 22:41:24,900 | INFO     | will attempt to kill all subprocesses of pid=3279214
[2026-02-18 22:41:59] 2026-02-18 22:41:25,378 | INFO     | process IDs to be killed: [3279214] (in reverse order)
[2026-02-18 22:41:59] 2026-02-18 22:41:25,553 | WARNING  | found no corresponding commands to process id(s)
[2026-02-18 22:41:59] 2026-02-18 22:41:25,554 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-18 22:41:59] 2026-02-18 22:41:25,573 | INFO     | did not find any defunct processes belonging to 3279214
[2026-02-18 22:41:59] 2026-02-18 22:41:25,588 | INFO     | did not find any defunct processes belonging to 3279214
[2026-02-18 22:41:59] 2026-02-18 22:41:25,588 | INFO     | ready for new job
[2026-02-18 22:41:59] 2026-02-18 22:41:25,588 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-18 22:41:59] 2026-02-18 22:41:25,590 | INFO     | **************************************
[2026-02-18 22:41:59] 2026-02-18 22:41:25,590 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-18 22:41:59] 2026-02-18 22:41:25,590 | INFO     | **************************************
[2026-02-18 22:41:59] 2026-02-18 22:41:25,590 | INFO     | 
[2026-02-18 22:41:59] 2026-02-18 22:41:25,620 | INFO     | architecture information:
[2026-02-18 22:41:59] 2026-02-18 22:41:25,620 | INFO     | executing command: cat /etc/os-release
[2026-02-18 22:41:59] 2026-02-18 22:41:25,635 | INFO     | cat /etc/os-release:
[2026-02-18 22:41:59] NAME="CentOS Linux"
[2026-02-18 22:41:59] VERSION="7 (Core)"
[2026-02-18 22:41:59] ID="centos"
[2026-02-18 22:41:59] ID_LIKE="rhel fedora"
[2026-02-18 22:41:59] VERSION_ID="7"
[2026-02-18 22:41:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-18 22:41:59] ANSI_COLOR="0;31"
[2026-02-18 22:41:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-18 22:41:59] HOME_URL="https://www.centos.org/"
[2026-02-18 22:41:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-18 22:41:59] 
[2026-02-18 22:41:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-18 22:41:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-18 22:41:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-18 22:41:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-18 22:41:59] 
[2026-02-18 22:41:59] 2026-02-18 22:41:25,636 | INFO     | **************************************
[2026-02-18 22:41:59] 2026-02-18 22:41:26,139 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2026-02-18 22:41:59] 2026-02-18 22:41:26,158 | INFO     | sufficient remaining disk space (1688812388352 B)
[2026-02-18 22:41:59] 2026-02-18 22:41:26,159 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-18 22:41:59] 2026-02-18 22:41:26,159 | INFO     | current server update state: UPDATING_FINAL
[2026-02-18 22:41:59] 2026-02-18 22:41:26,159 | INFO     | update_server=False
[2026-02-18 22:41:59] 2026-02-18 22:41:26,159 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-18 22:41:59] 2026-02-18 22:41:26,159 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-18 22:41:59] 2026-02-18 22:41:26,160 | INFO     | aborting loop
[2026-02-18 22:41:59] 2026-02-18 22:41:26,562 | INFO     | all data control threads have been joined
[2026-02-18 22:41:59] 2026-02-18 22:41:26,665 | INFO     | all payload control threads have been joined
[2026-02-18 22:41:59] 2026-02-18 22:41:27,164 | INFO     | [job] retrieve thread has finished
[2026-02-18 22:41:59] 2026-02-18 22:41:27,165 | INFO     | [job] job monitor thread has finished
[2026-02-18 22:41:59] 2026-02-18 22:41:27,268 | INFO     | [data] copytool_in thread has finished
[2026-02-18 22:41:59] 2026-02-18 22:41:27,329 | INFO     | [payload] execute_payloads thread has finished
[2026-02-18 22:41:59] 2026-02-18 22:41:27,470 | INFO     | all job control threads have been joined
[2026-02-18 22:41:59] 2026-02-18 22:41:27,548 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-18 22:41:59] 2026-02-18 22:41:27,567 | INFO     | [data] control thread has finished
[2026-02-18 22:41:59] 2026-02-18 22:41:27,671 | INFO     | [payload] control thread has finished
[2026-02-18 22:41:59] 2026-02-18 22:41:27,940 | INFO     | [payload] failed_post thread has finished
[2026-02-18 22:41:59] 2026-02-18 22:41:27,984 | INFO     | [job] validate thread has finished
[2026-02-18 22:41:59] 2026-02-18 22:41:28,184 | INFO     | [job] create_data_payload thread has finished
[2026-02-18 22:41:59] 2026-02-18 22:41:28,243 | INFO     | [payload] validate_pre thread has finished
[2026-02-18 22:41:59] 2026-02-18 22:41:28,353 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-18 22:41:59] 2026-02-18 22:41:28,476 | INFO     | [job] control thread has finished
[2026-02-18 22:41:59] 2026-02-18 22:41:28,480 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-18 22:41:59] 2026-02-18 22:41:28,556 | INFO     | [payload] validate_post thread has finished
[2026-02-18 22:41:59] 2026-02-18 22:41:28,872 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-18 22:41:59] 2026-02-18 22:41:29,553 | INFO     | [data] copytool_out thread has finished
[2026-02-18 22:41:59] 2026-02-18 22:41:29,877 | INFO     | [job] queue monitor thread has finished
[2026-02-18 22:41:59] 2026-02-18 22:41:32,359 | INFO     | [data] queue_monitor thread has finished
[2026-02-18 22:41:59] 2026-02-18 22:41:53,592 | INFO     | [monitor] cgroup control has ended
[2026-02-18 22:41:59] 2026-02-18 22:41:53,734 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140025697969984)>', '<ExcThread(monitor, started 140025127761664)>']
[2026-02-18 22:41:59] 2026-02-18 22:41:56,744 | INFO     | PID=3273655 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-18 22:41:59] 2026-02-18 22:41:56,744 | INFO     | .. there are 13 such processes running
[2026-02-18 22:41:59] 2026-02-18 22:41:56,745 | INFO     | found 0 job(s) in 20 queues
[2026-02-18 22:41:59] 2026-02-18 22:41:56,745 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-18 22:41:59] 2026-02-18 22:41:56,745 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-18 22:41:59] 2026-02-18 22:41:56,745 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-18 22:41:59] 2026-02-18 22:41:56,745 | INFO     | [monitor] control thread has ended
[2026-02-18 22:41:59] 2026-02-18 22:41:58,760 | INFO     | all workflow threads have been joined
[2026-02-18 22:41:59] 2026-02-18 22:41:58,760 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-18 22:41:59] 2026-02-18 22:41:58,760 | INFO     | traces error code: 0
[2026-02-18 22:41:59] 2026-02-18 22:41:58,760 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-18 22:41:59] 2026-02-18 22:41:58,868 [wrapper] ==== pilot stdout END ====
[2026-02-18 22:41:59] 2026-02-18 22:41:58,871 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-18 22:41:59] 2026-02-18 22:41:58,875 [wrapper] pilotpid: 3273655
[2026-02-18 22:41:59] 2026-02-18 22:41:58,878 [wrapper] Pilot exit status: 0
[2026-02-18 22:41:59] 2026-02-18 22:41:58,889 [wrapper] pandaids: 7018296851
[2026-02-18 22:41:59] 2026-02-18 22:41:59,010 [wrapper] cleanup supervisor_pilot 3497161 3273656
[2026-02-18 22:41:59] 2026-02-18 22:41:59,013 [wrapper] Test setup, not cleaning
[2026-02-18 22:41:59] 2026-02-18 22:41:59,017 [wrapper] apfmon messages muted
[2026-02-18 22:41:59] 2026-02-18 22:41:59,019 [wrapper] ==== wrapper stdout END ====
[2026-02-18 22:41:59] 2026-02-18 22:41:59,021 [wrapper] ==== wrapper stderr END ====
[2026-02-18 22:41:59]  *** Error codes and diagnostics ***
[2026-02-18 22:41:59]     "exeErrorCode": 0,
[2026-02-18 22:41:59]     "exeErrorDiag": "",
[2026-02-18 22:41:59]     "pilotErrorCode": 0,
[2026-02-18 22:41:59]     "pilotErrorDiag": "",
[2026-02-18 22:41:59]  *** Listing of results directory ***
[2026-02-18 22:41:59] total 960568
[2026-02-18 22:41:59] -rw-r--r-- 1 boinc boinc      5111 Feb 17 13:36 queuedata.json
[2026-02-18 22:41:59] -rw-r--r-- 1 boinc boinc    584627 Feb 17 13:36 pilot3.tar.gz
[2026-02-18 22:41:59] -rwx------ 1 boinc boinc     36322 Feb 17 13:36 runpilot2-wrapper.sh
[2026-02-18 22:41:59] -rw-r--r-- 1 boinc boinc       100 Feb 18 21:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-18 22:41:59] -rwxr-xr-x 1 boinc boinc      7986 Feb 18 21:21 run_atlas
[2026-02-18 22:41:59] -rw-r--r-- 1 boinc boinc       105 Feb 18 21:21 job.xml
[2026-02-18 22:41:59] -rw-r--r-- 2 boinc boinc 681905640 Feb 18 21:21 EVNT.48508760._000374.pool.root.1
[2026-02-18 22:41:59] -rw-r--r-- 2 boinc boinc     15845 Feb 18 21:21 start_atlas.sh
[2026-02-18 22:41:59] drwxrwx--x 2 boinc boinc      4096 Feb 18 21:21 shared
[2026-02-18 22:41:59] -rw-r--r-- 2 boinc boinc    597957 Feb 18 21:21 input.tar.gz
[2026-02-18 22:41:59] -rw-r--r-- 1 boinc boinc      9417 Feb 18 21:21 init_data.xml
[2026-02-18 22:41:59] -rw-r--r-- 1 boinc boinc         0 Feb 18 21:21 boinc_setup_complete
[2026-02-18 22:41:59] -rw-r--r-- 1 boinc boinc         0 Feb 18 21:21 boinc_lockfile
[2026-02-18 22:41:59] -rw-r--r-- 1 boinc boinc      2551 Feb 18 21:21 pandaJob.out
[2026-02-18 22:41:59] -rw------- 1 boinc boinc   1001034 Feb 18 21:21 agis_schedconf.cvmfs.json
[2026-02-18 22:41:59] -rw------- 1 boinc boinc   1513015 Feb 18 21:21 agis_ddmendpoints.agis.ALL.json
[2026-02-18 22:41:59] -rw------- 1 boinc boinc       419 Feb 18 21:21 workernode_map.json
[2026-02-18 22:41:59] drwx------ 5 boinc boinc      4096 Feb 18 21:21 pilot3
[2026-02-18 22:41:59] -rw------- 1 boinc boinc 295648253 Feb 18 22:40 HITS.48508763._019193.pool.root.1
[2026-02-18 22:41:59] -rw-r--r-- 1 boinc boinc       530 Feb 18 22:40 boinc_task_state.xml
[2026-02-18 22:41:59] -rw------- 1 boinc boinc      1031 Feb 18 22:41 memory_monitor_summary.json
[2026-02-18 22:41:59] -rw------- 1 boinc boinc    380610 Feb 18 22:41 log.48508763._019193.job.log.tgz.1
[2026-02-18 22:41:59] -rw------- 1 boinc boinc      6288 Feb 18 22:41 heartbeat.json
[2026-02-18 22:41:59] -rw------- 1 boinc boinc        95 Feb 18 22:41 pilot_heartbeat.json
[2026-02-18 22:41:59] -rw-r--r-- 1 boinc boinc        27 Feb 18 22:41 wrapper_checkpoint.txt
[2026-02-18 22:41:59] -rw-r--r-- 1 boinc boinc      8192 Feb 18 22:41 boinc_mmap_file
[2026-02-18 22:41:59] -rw------- 1 boinc boinc      4823 Feb 18 22:41 pilotlog.txt
[2026-02-18 22:41:59] -rw------- 1 boinc boinc    684964 Feb 18 22:41 log.48508763._019193.job.log.1
[2026-02-18 22:41:59] -rw------- 1 boinc boinc       357 Feb 18 22:41 output.list
[2026-02-18 22:41:59] -rw-r--r-- 1 boinc boinc       620 Feb 18 22:41 runtime_log
[2026-02-18 22:41:59] -rw------- 1 boinc boinc   1085440 Feb 18 22:41 result.tar.gz
[2026-02-18 22:41:59] -rw------- 1 boinc boinc       644 Feb 18 22:41 xa6KDm1QaC9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmpCuKDm24zTgm.diag
[2026-02-18 22:41:59] -rw-r--r-- 1 boinc boinc      8787 Feb 18 22:41 runtime_log.err
[2026-02-18 22:41:59] -rw-r--r-- 1 boinc boinc     22343 Feb 18 22:41 stderr.txt
[2026-02-18 22:41:59] HITS file was successfully produced:
[2026-02-18 22:41:59] -rw------- 1 boinc boinc 295648253 Feb 18 22:40 shared/HITS.pool.root.1
[2026-02-18 22:41:59]  *** Contents of shared directory: ***
[2026-02-18 22:41:59] total 956312
[2026-02-18 22:41:59] -rw-r--r-- 2 boinc boinc 681905640 Feb 18 21:21 ATLAS.root_0
[2026-02-18 22:41:59] -rw-r--r-- 2 boinc boinc     15845 Feb 18 21:21 start_atlas.sh
[2026-02-18 22:41:59] -rw-r--r-- 2 boinc boinc    597957 Feb 18 21:21 input.tar.gz
[2026-02-18 22:41:59] -rw------- 1 boinc boinc 295648253 Feb 18 22:40 HITS.pool.root.1
[2026-02-18 22:41:59] -rw------- 1 boinc boinc   1085440 Feb 18 22:41 result.tar.gz
22:42:00 (3268617): run_atlas exited; CPU time 53334.703077
22:42:00 (3268617): called boinc_finish(0)

</stderr_txt>
]]>

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