Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:53:43 (1963778): wrapper (7.7.26015): starting
04:53:43 (1963778): wrapper: running run_atlas (--nthreads 4)
[2026-02-19 04:53:43] Arguments: --nthreads 4
[2026-02-19 04:53:43] Threads: 4
[2026-02-19 04:53:43] Checking for CVMFS
[2026-02-19 04:53:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-19 04:53:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-19 04:53:43] Running cvmfs_config stat atlas.cern.ch
[2026-02-19 04:53:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-19 04:53:44] 2.9.2.0 1046581 5975 102088 156392 1 50 26736205 36864000 0 130560 0 2411546 99.985 196440 16393 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-19 04:53:44] CVMFS is ok
[2026-02-19 04:53:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-19 04:53:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-19 04:53:44] Further information can be found at the LHC@home message board.
[2026-02-19 04:53:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-19 04:53:44] Checking for apptainer binary...
[2026-02-19 04:53:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-19 04:53:44] Running /usr/bin/apptainer --version
[2026-02-19 04:53:44] apptainer version 1.4.1-1.1
[2026-02-19 04:53:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-19 04:53:44] thA309
[2026-02-19 04:53:44] apptainer works
[2026-02-19 04:53:44] Set ATHENA_PROC_NUMBER=4
[2026-02-19 04:53:44] Set ATHENA_CORE_NUMBER=4
[2026-02-19 04:53:44] Starting ATLAS job with PandaID=7019161753
[2026-02-19 04:53:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-19 06:41:11]  *** The last 200 lines of the pilot log: ***
[2026-02-19 06:41:11] 2026-02-19 05:40:39,911 | INFO     | number of running child processes to parent process 1972407: 1
[2026-02-19 06:41:11] 2026-02-19 05:40:39,911 | INFO     | maximum number of monitored processes: 6
[2026-02-19 06:41:11] 2026-02-19 05:40:39,911 | INFO     | aborting job monitoring since job object (job id=7019161753) has expired
[2026-02-19 06:41:11] 2026-02-19 05:40:40,876 | INFO     | --- collectZombieJob: --- 10, [1972407]
[2026-02-19 06:41:11] 2026-02-19 05:40:40,876 | INFO     | zombie collector waiting for pid 1972407
[2026-02-19 06:41:11] 2026-02-19 05:40:40,876 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-19 06:41:11] 2026-02-19 05:40:40,876 | INFO     | collected zombie processes
[2026-02-19 06:41:11] 2026-02-19 05:40:40,876 | INFO     | will attempt to kill all subprocesses of pid=1972407
[2026-02-19 06:41:11] 2026-02-19 05:40:40,925 | INFO     | process IDs to be killed: [1972407] (in reverse order)
[2026-02-19 06:41:11] 2026-02-19 05:40:40,960 | WARNING  | found no corresponding commands to process id(s)
[2026-02-19 06:41:11] 2026-02-19 05:40:40,961 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-19 06:41:11] 2026-02-19 05:40:40,963 | INFO     | did not find any defunct processes belonging to 1972407
[2026-02-19 06:41:11] 2026-02-19 05:40:40,964 | INFO     | did not find any defunct processes belonging to 1972407
[2026-02-19 06:41:11] 2026-02-19 05:40:40,964 | INFO     | ready for new job
[2026-02-19 06:41:11] 2026-02-19 05:40:40,964 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-19 06:41:11] 2026-02-19 05:40:40,965 | INFO     | **************************************
[2026-02-19 06:41:11] 2026-02-19 05:40:40,965 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-19 06:41:11] 2026-02-19 05:40:40,965 | INFO     | **************************************
[2026-02-19 06:41:11] 2026-02-19 05:40:40,965 | INFO     | 
[2026-02-19 06:41:11] 2026-02-19 05:40:40,966 | INFO     | architecture information:
[2026-02-19 06:41:11] 2026-02-19 05:40:40,966 | INFO     | executing command: cat /etc/os-release
[2026-02-19 06:41:11] 2026-02-19 05:40:40,980 | INFO     | cat /etc/os-release:
[2026-02-19 06:41:11] NAME="CentOS Linux"
[2026-02-19 06:41:11] VERSION="7 (Core)"
[2026-02-19 06:41:11] ID="centos"
[2026-02-19 06:41:11] ID_LIKE="rhel fedora"
[2026-02-19 06:41:11] VERSION_ID="7"
[2026-02-19 06:41:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-19 06:41:11] ANSI_COLOR="0;31"
[2026-02-19 06:41:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-19 06:41:11] HOME_URL="https://www.centos.org/"
[2026-02-19 06:41:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-19 06:41:11] 
[2026-02-19 06:41:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-19 06:41:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-19 06:41:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-19 06:41:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-19 06:41:11] 
[2026-02-19 06:41:11] 2026-02-19 05:40:40,980 | INFO     | **************************************
[2026-02-19 06:41:11] 2026-02-19 05:40:41,484 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-19 06:41:11] 2026-02-19 05:40:41,502 | INFO     | sufficient remaining disk space (228791943168 B)
[2026-02-19 06:41:11] 2026-02-19 05:40:41,502 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-19 06:41:11] 2026-02-19 05:40:41,502 | INFO     | current server update state: UPDATING_FINAL
[2026-02-19 06:41:11] 2026-02-19 05:40:41,502 | INFO     | update_server=False
[2026-02-19 06:41:11] 2026-02-19 05:40:41,502 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-19 06:41:11] 2026-02-19 05:40:41,502 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-19 06:41:11] 2026-02-19 05:40:41,502 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-19 06:41:11] 2026-02-19 05:40:41,502 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-19 06:41:11] 2026-02-19 05:40:41,503 | INFO     | aborting loop
[2026-02-19 06:41:11] 2026-02-19 05:40:42,237 | INFO     | all payload control threads have been joined
[2026-02-19 06:41:11] 2026-02-19 05:40:42,452 | INFO     | all job control threads have been joined
[2026-02-19 06:41:11] 2026-02-19 05:40:42,508 | INFO     | [job] retrieve thread has finished
[2026-02-19 06:41:11] 2026-02-19 05:40:42,508 | INFO     | [job] queue monitor thread has finished
[2026-02-19 06:41:11] 2026-02-19 05:40:42,508 | INFO     | [job] job monitor thread has finished
[2026-02-19 06:41:11] 2026-02-19 05:40:42,575 | INFO     | all data control threads have been joined
[2026-02-19 06:41:11] 2026-02-19 05:40:42,630 | INFO     | [payload] validate_pre thread has finished
[2026-02-19 06:41:11] 2026-02-19 05:40:42,770 | INFO     | [data] copytool_in thread has finished
[2026-02-19 06:41:11] 2026-02-19 05:40:43,243 | INFO     | [payload] control thread has finished
[2026-02-19 06:41:11] 2026-02-19 05:40:43,338 | INFO     | [payload] execute_payloads thread has finished
[2026-02-19 06:41:11] 2026-02-19 05:40:43,458 | INFO     | [job] control thread has finished
[2026-02-19 06:41:11] 2026-02-19 05:40:43,509 | INFO     | [data] copytool_out thread has finished
[2026-02-19 06:41:11] 2026-02-19 05:40:43,581 | INFO     | [data] control thread has finished
[2026-02-19 06:41:11] 2026-02-19 05:40:43,778 | INFO     | [payload] validate_post thread has finished
[2026-02-19 06:41:11] 2026-02-19 05:40:43,902 | INFO     | [payload] failed_post thread has finished
[2026-02-19 06:41:11] 2026-02-19 05:40:43,918 | INFO     | [job] validate thread has finished
[2026-02-19 06:41:11] 2026-02-19 05:40:43,998 | INFO     | [job] create_data_payload thread has finished
[2026-02-19 06:41:11] 2026-02-19 05:40:44,050 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-19 06:41:11] 2026-02-19 05:40:48,057 | INFO     | [data] queue_monitor thread has finished
[2026-02-19 06:41:11] 2026-02-19 05:40:52,455 | INFO     | job.realtimelogging is not enabled
[2026-02-19 06:41:11] 2026-02-19 05:40:53,460 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-19 06:41:11] 2026-02-19 05:41:03,911 | INFO     | [monitor] cgroup control has ended
[2026-02-19 06:41:11] 2026-02-19 05:41:05,050 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140048385304384)>', '<ExcThread(monitor, started 140047542122240)>']
[2026-02-19 06:41:11] 2026-02-19 05:41:10,075 | INFO     | all workflow threads have been joined
[2026-02-19 06:41:11] 2026-02-19 05:41:10,076 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-19 06:41:11] 2026-02-19 05:41:10,076 | INFO     | traces error code: 0
[2026-02-19 06:41:11] 2026-02-19 05:41:10,076 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-19 06:41:11] 2026-02-19 05:41:11,228 | INFO     | PID=1967890 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-19 06:41:11] 2026-02-19 05:41:11,229 | INFO     | found 0 job(s) in 20 queues
[2026-02-19 06:41:11] 2026-02-19 05:41:11,229 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-19 06:41:11] 2026-02-19 05:41:11,229 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-19 06:41:11] 2026-02-19 05:41:11,229 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-19 06:41:11] 2026-02-19 05:41:11,229 | INFO     | [monitor] control thread has ended
[2026-02-19 06:41:11] 2026-02-19 05:41:11,305 [wrapper] ==== pilot stdout END ====
[2026-02-19 06:41:11] 2026-02-19 05:41:11,309 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-19 06:41:11] 2026-02-19 05:41:11,314 [wrapper] pilotpid: 1967890
[2026-02-19 06:41:11] 2026-02-19 05:41:11,318 [wrapper] Pilot exit status: 0
[2026-02-19 06:41:11] 2026-02-19 05:41:11,330 [wrapper] pandaids: 7019161753
[2026-02-19 06:41:11] 2026-02-19 05:41:11,353 [wrapper] cleanup supervisor_pilot 1979050 1967891
[2026-02-19 06:41:11] 2026-02-19 05:41:11,357 [wrapper] Test setup, not cleaning
[2026-02-19 06:41:11] 2026-02-19 05:41:11,361 [wrapper] apfmon messages muted
[2026-02-19 06:41:11] 2026-02-19 05:41:11,365 [wrapper] ==== wrapper stdout END ====
[2026-02-19 06:41:11] 2026-02-19 05:41:11,369 [wrapper] ==== wrapper stderr END ====
[2026-02-19 06:41:11]  *** Error codes and diagnostics ***
[2026-02-19 06:41:11]     "exeErrorCode": 0,
[2026-02-19 06:41:11]     "exeErrorDiag": "",
[2026-02-19 06:41:11]     "pilotErrorCode": 0,
[2026-02-19 06:41:11]     "pilotErrorDiag": "",
[2026-02-19 06:41:11]  *** Listing of results directory ***
[2026-02-19 06:41:11] total 949860
[2026-02-19 06:41:11] -rw-r--r-- 1 boinc boinc    584627 Feb 18 06:12 pilot3.tar.gz
[2026-02-19 06:41:11] -rwx------ 1 boinc boinc     36322 Feb 18 06:14 runpilot2-wrapper.sh
[2026-02-19 06:41:11] -rw-r--r-- 1 boinc boinc      5111 Feb 18 06:21 queuedata.json
[2026-02-19 06:41:11] -rw-r--r-- 1 boinc boinc       100 Feb 19 04:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-19 06:41:11] -rwxr-xr-x 1 boinc boinc      7986 Feb 19 04:53 run_atlas
[2026-02-19 06:41:11] -rw-r--r-- 1 boinc boinc       105 Feb 19 04:53 job.xml
[2026-02-19 06:41:11] -rw-r--r-- 2 boinc boinc 683269255 Feb 19 04:53 EVNT.48508760._000595.pool.root.1
[2026-02-19 06:41:11] -rw-r--r-- 2 boinc boinc    597963 Feb 19 04:53 input.tar.gz
[2026-02-19 06:41:11] -rw-r--r-- 2 boinc boinc     15845 Feb 19 04:53 start_atlas.sh
[2026-02-19 06:41:11] drwxrwx--x 2 boinc boinc      4096 Feb 19 04:53 shared
[2026-02-19 06:41:11] -rw-r--r-- 1 boinc boinc         0 Feb 19 04:53 boinc_setup_complete
[2026-02-19 06:41:11] -rw-r--r-- 1 boinc boinc      6377 Feb 19 04:53 init_data.xml
[2026-02-19 06:41:11] -rw-r--r-- 1 boinc boinc         0 Feb 19 04:53 boinc_lockfile
[2026-02-19 06:41:11] -rw-r--r-- 1 boinc boinc      2552 Feb 19 04:53 pandaJob.out
[2026-02-19 06:41:11] -rw------- 1 boinc boinc   1001034 Feb 19 04:53 agis_schedconf.cvmfs.json
[2026-02-19 06:41:11] -rw------- 1 boinc boinc   1513015 Feb 19 04:53 agis_ddmendpoints.agis.ALL.json
[2026-02-19 06:41:11] -rw------- 1 boinc boinc       418 Feb 19 04:53 workernode_map.json
[2026-02-19 06:41:11] drwx------ 5 boinc boinc      4096 Feb 19 04:53 pilot3
[2026-02-19 06:41:11] -rw------- 1 boinc boinc 282967504 Feb 19 06:40 HITS.48508763._029474.pool.root.1
[2026-02-19 06:41:11] -rw-r--r-- 1 boinc boinc       530 Feb 19 06:40 boinc_task_state.xml
[2026-02-19 06:41:11] -rw------- 1 boinc boinc        95 Feb 19 06:40 pilot_heartbeat.json
[2026-02-19 06:41:11] -rw------- 1 boinc boinc      1024 Feb 19 06:40 memory_monitor_summary.json
[2026-02-19 06:41:11] -rw------- 1 boinc boinc    330415 Feb 19 06:40 log.48508763._029474.job.log.tgz.1
[2026-02-19 06:41:11] -rw------- 1 boinc boinc      6309 Feb 19 06:40 heartbeat.json
[2026-02-19 06:41:11] -rw-r--r-- 1 boinc boinc      8192 Feb 19 06:40 boinc_mmap_file
[2026-02-19 06:41:11] -rw-r--r-- 1 boinc boinc        27 Feb 19 06:40 wrapper_checkpoint.txt
[2026-02-19 06:41:11] -rw------- 1 boinc boinc       747 Feb 19 06:41 pilotlog.txt
[2026-02-19 06:41:11] -rw------- 1 boinc boinc    925452 Feb 19 06:41 log.48508763._029474.job.log.1
[2026-02-19 06:41:11] -rw------- 1 boinc boinc       357 Feb 19 06:41 output.list
[2026-02-19 06:41:11] -rw-r--r-- 1 boinc boinc       620 Feb 19 06:41 runtime_log
[2026-02-19 06:41:11] -rw------- 1 boinc boinc   1269760 Feb 19 06:41 result.tar.gz
[2026-02-19 06:41:11] -rw-r--r-- 1 boinc boinc      8896 Feb 19 06:41 runtime_log.err
[2026-02-19 06:41:11] -rw------- 1 boinc boinc       657 Feb 19 06:41 1aoNDmP4oC9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm3fvKDmAcP4En.diag
[2026-02-19 06:41:11] -rw-r--r-- 1 boinc boinc     11060 Feb 19 06:41 stderr.txt
[2026-02-19 06:41:11] HITS file was successfully produced:
[2026-02-19 06:41:11] -rw------- 1 boinc boinc 282967504 Feb 19 06:40 shared/HITS.pool.root.1
[2026-02-19 06:41:11]  *** Contents of shared directory: ***
[2026-02-19 06:41:11] total 945440
[2026-02-19 06:41:11] -rw-r--r-- 2 boinc boinc 683269255 Feb 19 04:53 ATLAS.root_0
[2026-02-19 06:41:11] -rw-r--r-- 2 boinc boinc    597963 Feb 19 04:53 input.tar.gz
[2026-02-19 06:41:11] -rw-r--r-- 2 boinc boinc     15845 Feb 19 04:53 start_atlas.sh
[2026-02-19 06:41:11] -rw------- 1 boinc boinc 282967504 Feb 19 06:40 HITS.pool.root.1
[2026-02-19 06:41:11] -rw------- 1 boinc boinc   1269760 Feb 19 06:41 result.tar.gz
06:41:13 (1963778): run_atlas exited; CPU time 24343.536403
06:41:13 (1963778): called boinc_finish(0)

</stderr_txt>
]]>

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