Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-18 12:31:31 (44788): vboxwrapper version 26210
2026-02-18 12:31:31 (44788): BOINC client version: 8.2.8
2026-02-18 12:31:31 (44788): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-02-18 12:31:32 (44788): Successfully copied 'init_data.xml' to the shared directory.
2026-02-18 12:31:32 (44788): Create VM. (boinc_1dfa94a6764a6e47, slot#13)
2026-02-18 12:31:33 (44788): Setting Memory Size for VM. (4096MB)
2026-02-18 12:31:33 (44788): Setting CPU Count for VM. (1)
2026-02-18 12:31:33 (44788): Setting Chipset Options for VM.
2026-02-18 12:31:34 (44788): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-18 12:31:34 (44788): Setting Boot Options for VM.
2026-02-18 12:31:34 (44788): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-18 12:31:35 (44788): Enabling VM Network Access.
2026-02-18 12:31:35 (44788): Disabling USB Support for VM.
2026-02-18 12:31:35 (44788): Disabling COM Port Support for VM.
2026-02-18 12:31:35 (44788): Disabling LPT Port Support for VM.
2026-02-18 12:31:36 (44788): Disabling Audio Support for VM.
2026-02-18 12:31:36 (44788): Disabling Clipboard Support for VM.
2026-02-18 12:31:36 (44788): Disabling Drag and Drop Support for VM.
2026-02-18 12:31:36 (44788): Adding storage controller(s) to VM.
2026-02-18 12:31:37 (44788): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-18 12:31:37 (44788): Adding VirtualBox Guest Additions to VM.
2026-02-18 12:31:37 (44788): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-18 12:31:38 (44788): forwarding host port 49769 to guest port 80
2026-02-18 12:31:38 (44788): Enabling remote desktop for VM.
2026-02-18 12:31:38 (44788): Required extension pack not installed, remote desktop not enabled.
2026-02-18 12:31:38 (44788): Enabling shared directory for VM.
2026-02-18 12:31:39 (44788): Starting VM using VBoxManage interface. (boinc_1dfa94a6764a6e47, slot#13)
2026-02-18 12:31:43 (44788): Successfully started VM. (PID = '44256')
2026-02-18 12:31:43 (44788): Reporting VM Process ID to BOINC.
2026-02-18 12:31:43 (44788): Guest Log: BIOS: VirtualBox 7.2.6
2026-02-18 12:31:43 (44788): Guest Log: CPUID EDX: 0x178bfbff
2026-02-18 12:31:43 (44788): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-18 12:31:43 (44788): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-18 12:31:43 (44788): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-18 12:31:43 (44788): Detected: Web Application Enabled (http://localhost:49769)
2026-02-18 12:31:43 (44788): Preference change detected
2026-02-18 12:31:43 (44788): Setting CPU throttle for VM. (100%)
2026-02-18 12:31:43 (44788): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-18 12:31:45 (44788): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-18 12:31:45 (44788): Guest Log: BIOS: Booting from Hard Disk...
2026-02-18 12:31:47 (44788): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-18 12:31:47 (44788): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-18 12:31:47 (44788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-18 12:31:50 (44788): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-18 12:31:50 (44788): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-18 12:31:55 (44788): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-18 12:31:55 (44788): Guest Log: 00:00:00.000131 main     Log opened 2026-02-18T12:31:53.362764000Z
2026-02-18 12:31:55 (44788): Guest Log: 00:00:00.000231 main     OS Product: Linux
2026-02-18 12:31:55 (44788): Guest Log: 00:00:00.000242 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-18 12:31:55 (44788): Guest Log: 00:00:00.000250 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-18 12:31:55 (44788): Guest Log: 00:00:00.000259 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-18 12:31:55 (44788): Guest Log: 00:00:00.000259 main     Process ID: 1243
2026-02-18 12:31:55 (44788): Guest Log: 00:00:00.000259 main     Package type: LINUX_64BITS_GENERIC
2026-02-18 12:31:55 (44788): Guest Log: 00:00:00.001032 main     5.2.32 r132073 started. Verbose level = 0
2026-02-18 12:31:55 (44788): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-18 12:31:55 (44788): Guest Log: [INFO] Mounting shared directory
2026-02-18 12:31:55 (44788): Guest Log: [INFO] Checking for init_data.xml
2026-02-18 12:31:56 (44788): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-18 12:31:56 (44788): Guest Log: [INFO] Detected branch: prod
2026-02-18 12:31:56 (44788): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-18 12:31:56 (44788): Guest Log: Copying input files
2026-02-18 12:31:58 (44788): Guest Log: Copied input files into RunAtlas.
2026-02-18 12:31:58 (44788): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2026-02-18 12:32:05 (44788): Guest Log: 00:00:10.019050 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 951 728 000ns (GuestNow=1 771 414 324 429 454 000 ns GuestLast=1 771 417 913 381 182 000 ns fSetTimeLastLoop=true )
2026-02-18 12:32:05 (44788): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-18 12:32:05 (44788): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-18 12:32:05 (44788): Guest Log: 2.6.3.0 1513 0 31548 156368 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2026-02-18 12:32:06 (44788): Guest Log: copied the webapp to /var/www
2026-02-18 12:32:06 (44788): Guest Log: core_number=1
2026-02-18 12:32:06 (44788): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-18 12:32:06 (44788): Guest Log:  *** Starting ATLAS job. (PandaID=7018862040 taskID=48508763) ***
2026-02-18 14:11:46 (44788): Status Report: Elapsed Time: '6000.000000'
2026-02-18 14:11:46 (44788): Status Report: CPU Time: '5937.968750'
2026-02-18 15:51:48 (44788): Status Report: Elapsed Time: '12000.000000'
2026-02-18 15:51:48 (44788): Status Report: CPU Time: '11912.437500'
2026-02-18 17:31:51 (44788): Status Report: Elapsed Time: '18000.000000'
2026-02-18 17:31:51 (44788): Status Report: CPU Time: '17887.343750'
2026-02-18 18:14:56 (44788): VM state change detected. (old = 'running', new = 'paused')
2026-02-18 20:22:18 (44788): VM state change detected. (old = 'paused', new = 'running')
2026-02-18 20:22:26 (44788): Guest Log: 05:43:01.759750 timesync vgsvcTimeSyncWorker: Radical host time change: 7 644 634 000 000ns (HostNow=1 771 442 495 640 000 000 ns HostLast=1 771 434 851 006 000 000 ns)
2026-02-18 20:22:36 (44788): Guest Log: 05:43:11.766200 timesync vgsvcTimeSyncWorker: Radical guest time change: 7 609 475 965 000ns (GuestNow=1 771 442 505 646 150 000 ns GuestLast=1 771 434 896 170 185 000 ns fSetTimeLastLoop=true )
2026-02-18 21:19:17 (44788): Status Report: Elapsed Time: '24000.000000'
2026-02-18 21:19:17 (44788): Status Report: CPU Time: '23857.656250'
2026-02-18 22:59:20 (44788): Status Report: Elapsed Time: '30000.000000'
2026-02-18 22:59:20 (44788): Status Report: CPU Time: '29823.453125'
2026-02-19 00:03:35 (44788): Guest Log:  *** Job finished ***
2026-02-19 00:03:35 (44788): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-19 00:03:35 (44788): Guest Log: 2026-02-18 23:02:40,291 | INFO     | end of generic workflow (traces error code: 0)
2026-02-19 00:03:35 (44788): Guest Log: 2026-02-18 23:02:40,291 | INFO     | traces error code: 0
2026-02-19 00:03:35 (44788): Guest Log: 2026-02-18 23:02:40,292 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-19 00:03:35 (44788): Guest Log: 2026-02-18 23:02:48,210 | INFO     | PID=5855 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-02-19 00:03:35 (44788): Guest Log: 2026-02-18 23:02:48,210 | INFO     | found 0 job(s) in 20 queues
2026-02-19 00:03:35 (44788): Guest Log: 2026-02-18 23:02:48,210 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-19 00:03:35 (44788): Guest Log: 2026-02-18 23:02:48,210 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-19 00:03:35 (44788): Guest Log: 2026-02-18 23:02:48,210 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-19 00:03:35 (44788): Guest Log: 2026-02-18 23:02:48,210 | CRITICAL | thread 'MainThread' is not alive
2026-02-19 00:03:35 (44788): Guest Log: 2026-02-18 23:02:48,210 | INFO     | [monitor] control thread has ended
2026-02-19 00:03:35 (44788): Guest Log: 2026-02-18 23:02:48,304 [wrapper] ==== pilot stdout END ====
2026-02-19 00:03:35 (44788): Guest Log: 2026-02-18 23:02:48,306 [wrapper] ==== wrapper stdout RESUME ====
2026-02-19 00:03:35 (44788): Guest Log: 2026-02-18 23:02:48,307 [wrapper] pilotpid: 5855
2026-02-19 00:03:35 (44788): Guest Log: 2026-02-18 23:02:48,308 [wrapper] Pilot exit status: 0
2026-02-19 00:03:35 (44788): Guest Log: 2026-02-18 23:02:48,319 [wrapper] pandaids: 7018862040
2026-02-19 00:03:35 (44788): Guest Log: 2026-02-18 23:02:48,329 [wrapper] cleanup supervisor_pilot  1105 5856
2026-02-19 00:03:35 (44788): Guest Log: 2026-02-18 23:02:48,331 [wrapper] Test setup, not cleaning
2026-02-19 00:03:35 (44788): Guest Log: 2026-02-18 23:02:48,333 [wrapper] apfmon messages muted
2026-02-19 00:03:35 (44788): Guest Log: 2026-02-18 23:02:48,335 [wrapper] ==== wrapper stdout END ====
2026-02-19 00:03:35 (44788): Guest Log: 2026-02-18 23:02:48,337 [wrapper] ==== wrapper stderr END ====
2026-02-19 00:03:35 (44788): Guest Log:  *** Error codes and diagnostics ***
2026-02-19 00:03:35 (44788): Guest Log:     "exeErrorCode": 0,
2026-02-19 00:03:35 (44788): Guest Log:     "exeErrorDiag": "",
2026-02-19 00:03:35 (44788): Guest Log:     "pilotErrorCode": 0,
2026-02-19 00:03:35 (44788): Guest Log:     "pilotErrorDiag": "",
2026-02-19 00:03:35 (44788): Guest Log:  *** Listing of results directory ***
2026-02-19 00:03:35 (44788): Guest Log: total 280168
2026-02-19 00:03:35 (44788): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 18 02:39 pilot3.tar.gz
2026-02-19 00:03:35 (44788): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 18 02:39 runpilot2-wrapper.sh
2026-02-19 00:03:35 (44788): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 18 02:39 queuedata.json
2026-02-19 00:03:35 (44788): Guest Log: -rwxr-xr-x. 1 atlas atlas      9356 Feb 18 11:31 init_data.xml
2026-02-19 00:03:35 (44788): Guest Log: -rwxr-xr-x. 1 atlas atlas    597957 Feb 18 11:31 input.tar.gz
2026-02-19 00:03:36 (44788): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb 18 11:31 start_atlas.sh
2026-02-19 00:03:36 (44788): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 18 11:31 EVNT.48508760._000509.pool.root.1 -> /data/./ATLAS.root_0
2026-02-19 00:03:36 (44788): Guest Log: -rw-r--r--. 1 atlas atlas      2552 Feb 18 11:32 pandaJob.out
2026-02-19 00:03:36 (44788): Guest Log: -rw-------. 1 atlas atlas        50 Feb 18 11:32 setup.sh.local
2026-02-19 00:03:36 (44788): Guest Log: -rw-------. 1 atlas atlas    999722 Feb 18 11:32 agis_schedconf.cvmfs.json
2026-02-19 00:03:36 (44788): Guest Log: -rw-------. 1 atlas atlas       424 Feb 18 11:32 workernode_map.json
2026-02-19 00:03:36 (44788): Guest Log: drwx------. 5 atlas atlas      4096 Feb 18 11:32 pilot3
2026-02-19 00:03:36 (44788): Guest Log: -rw-------. 1 atlas atlas 272286468 Feb 18 23:01 HITS.48508763._026050.pool.root.1
2026-02-19 00:03:36 (44788): Guest Log: -rw-------. 1 atlas atlas        97 Feb 18 23:02 pilot_heartbeat.json
2026-02-19 00:03:36 (44788): Guest Log: -rw-------. 1 atlas atlas      1024 Feb 18 23:02 memory_monitor_summary.json
2026-02-19 00:03:36 (44788): Guest Log: -rw-------. 1 atlas atlas   1513015 Feb 18 23:02 agis_ddmendpoints.agis.ALL.json
2026-02-19 00:03:36 (44788): Guest Log: -rw-------. 1 atlas atlas    660340 Feb 18 23:02 log.48508763._026050.job.log.tgz.1
2026-02-19 00:03:36 (44788): Guest Log: -rw-------. 1 atlas atlas      6371 Feb 18 23:02 heartbeat.json
2026-02-19 00:03:36 (44788): Guest Log: -rw-------. 1 atlas atlas       814 Feb 18 23:02 pilotlog.txt
2026-02-19 00:03:36 (44788): Guest Log: -rw-------. 1 atlas atlas   4711572 Feb 18 23:02 log.48508763._026050.job.log.1
2026-02-19 00:03:36 (44788): Guest Log: -rw-------. 1 atlas atlas       357 Feb 18 23:02 output.list
2026-02-19 00:03:36 (44788): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 18 23:02 runtime_log
2026-02-19 00:03:36 (44788): Guest Log: -rw-------. 1 atlas atlas   5386240 Feb 18 23:02 result.tar.gz
2026-02-19 00:03:36 (44788): Guest Log: -rw-r--r--. 1 atlas atlas      9114 Feb 18 23:02 runtime_log.err
2026-02-19 00:03:36 (44788): Guest Log: -rw-------. 1 atlas atlas       656 Feb 18 23:02 D11KDmNemC9n9Rq4apOajLDm4fhM0noT9bVooX4SDm3vtKDmnq7Gzm.diag
2026-02-19 00:03:36 (44788): Guest Log: Looking for outputfile HITS.48508763._026050.pool.root.1
2026-02-19 00:03:36 (44788): Guest Log: HITS file was successfully produced
2026-02-19 00:03:36 (44788): Guest Log: -rw-------. 1 atlas atlas 272286468 Feb 18 23:01 /home/atlas/RunAtlas/HITS.48508763._026050.pool.root.1
2026-02-19 00:03:36 (44788): Guest Log: Successfully finished the ATLAS job!
2026-02-19 00:03:36 (44788): Guest Log: Copying the results back to the shared directory!
2026-02-19 00:03:36 (44788): Guest Log:  *** Contents of shared directory: ***
2026-02-19 00:03:36 (44788): Guest Log: total 931592
2026-02-19 00:03:36 (44788): Guest Log: -rwxrwxrwx. 1 root root 675645713 Feb 18 11:31 ATLAS.root_0
2026-02-19 00:03:36 (44788): Guest Log: -rwxrwxrwx. 1 root root 272286468 Feb 18  2026 HITS.pool.root.1
2026-02-19 00:03:36 (44788): Guest Log: -rwxrwxrwx. 1 root root      9356 Feb 18 11:31 init_data.xml
2026-02-19 00:03:36 (44788): Guest Log: -rwxrwxrwx. 1 root root    597957 Feb 18 09:23 input.tar.gz
2026-02-19 00:03:36 (44788): Guest Log: -rwxrwxrwx. 1 root root   5386240 Feb 18  2026 result.tar.gz
2026-02-19 00:03:36 (44788): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb 18 09:23 start_atlas.sh
2026-02-19 00:03:36 (44788): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-19 00:03:36 (44788): VM Completion File Detected.
2026-02-19 00:03:36 (44788): Powering off VM.
2026-02-19 00:03:36 (44788): Successfully stopped VM.
2026-02-19 00:03:36 (44788): Deregistering VM. (boinc_1dfa94a6764a6e47, slot#13)
2026-02-19 00:03:36 (44788): Removing network bandwidth throttle group from VM.
2026-02-19 00:03:36 (44788): Removing VM from VirtualBox.
2026-02-19 00:03:42 (44788): called boinc_finish(0)

</stderr_txt>
]]>

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