Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:36:40 (31027): wrapper (7.7.26015): starting
21:36:40 (31027): wrapper: running run_atlas (--nthreads 8)
[2026-02-18 21:36:40] Arguments: --nthreads 8
[2026-02-18 21:36:40] Threads: 8
[2026-02-18 21:36:40] Checking for CVMFS
[2026-02-18 21:36:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-18 21:36:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-18 21:36:41] Running cvmfs_config stat atlas.cern.ch
[2026-02-18 21:36:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-18 21:36:43] 2.11.2.0 31778 61761 135320 156381 0 257 21660932 25165825 4081 130560 0 18715671 99.810 12634496 1653 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-18 21:36:43] CVMFS is ok
[2026-02-18 21:36:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-18 21:36:43] Checking for apptainer binary...
[2026-02-18 21:36:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-18 21:36:43] Running /usr/bin/apptainer --version
[2026-02-18 21:36:43] apptainer version 1.3.2-1.el7
[2026-02-18 21:36:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-18 21:36:48] cg-vwn373.simple-grid.lan
[2026-02-18 21:36:48] apptainer works
[2026-02-18 21:36:48] Set ATHENA_PROC_NUMBER=8
[2026-02-18 21:36:48] Set ATHENA_CORE_NUMBER=8
[2026-02-18 21:36:48] Starting ATLAS job with PandaID=7018853390
[2026-02-18 21:36:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-19 03:39:42]  *** The last 200 lines of the pilot log: ***
[2026-02-19 03:39:42] 2026-02-19 02:38:30,781 | INFO     | total number of processed events: 400 (read)
[2026-02-19 03:39:42] 2026-02-19 02:38:30,783 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-7018853390/memory_monitor_summary.json (trf name=prmon)
[2026-02-19 03:39:42] 2026-02-19 02:38:30,784 | INFO     | extracted standard info from prmon json
[2026-02-19 03:39:42] 2026-02-19 02:38:30,784 | INFO     | extracted standard memory fields from prmon json
[2026-02-19 03:39:42] 2026-02-19 02:38:30,784 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-19 03:39:42] 2026-02-19 02:38:30,785 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-19 03:39:42] 2026-02-19 02:38:30,785 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-19 03:39:42] 2026-02-19 02:38:30,793 | INFO     | fitting pss+swap vs Time
[2026-02-19 03:39:42] 2026-02-19 02:38:30,793 | INFO     | sum of square deviations: 12955770358.0
[2026-02-19 03:39:42] 2026-02-19 02:38:30,797 | INFO     | sum of deviations: 100887013670.00005
[2026-02-19 03:39:42] 2026-02-19 02:38:30,798 | INFO     | mean x: 1771458120.0
[2026-02-19 03:39:42] 2026-02-19 02:38:30,798 | INFO     | mean y: 2521335.7665706053
[2026-02-19 03:39:42] 2026-02-19 02:38:30,798 | INFO     | intersect: -13791881824.36025
[2026-02-19 03:39:42] 2026-02-19 02:38:30,799 | INFO     | chi2: 5.358750641699279
[2026-02-19 03:39:42] 2026-02-19 02:38:30,799 | INFO     | sum of square deviations: 12403750705.5
[2026-02-19 03:39:42] 2026-02-19 02:38:30,803 | INFO     | sum of deviations: 122893492315.0
[2026-02-19 03:39:42] 2026-02-19 02:38:30,804 | INFO     | mean x: 1771457967.5
[2026-02-19 03:39:42] 2026-02-19 02:38:30,804 | INFO     | mean y: 2527339.263157895
[2026-02-19 03:39:42] 2026-02-19 02:38:30,804 | INFO     | intersect: -17548668366.30477
[2026-02-19 03:39:42] 2026-02-19 02:38:30,805 | INFO     | chi2: 4.611643312789498
[2026-02-19 03:39:42] 2026-02-19 02:38:30,805 | INFO     | current chi2=4.611643312789498 (change=13.941819257200416 %)
[2026-02-19 03:39:42] 2026-02-19 02:38:30,805 | INFO     | right removable region: 341
[2026-02-19 03:39:42] 2026-02-19 02:38:30,806 | INFO     | sum of square deviations: 12403750705.5
[2026-02-19 03:39:42] 2026-02-19 02:38:30,809 | INFO     | sum of deviations: -14040029376.000004
[2026-02-19 03:39:42] 2026-02-19 02:38:30,810 | INFO     | mean x: 1771458272.5
[2026-02-19 03:39:42] 2026-02-19 02:38:30,810 | INFO     | mean y: 2553048.052631579
[2026-02-19 03:39:42] 2026-02-19 02:38:30,810 | INFO     | intersect: 2007698650.763747
[2026-02-19 03:39:42] 2026-02-19 02:38:30,810 | INFO     | chi2: 1.368015546011138
[2026-02-19 03:39:42] 2026-02-19 02:38:30,811 | INFO     | current chi2=1.368015546011138 (change=74.47137145427361 %)
[2026-02-19 03:39:42] 2026-02-19 02:38:30,811 | INFO     | sum of square deviations: 11867638328.0
[2026-02-19 03:39:42] 2026-02-19 02:38:30,815 | INFO     | sum of deviations: -43996070233.000015
[2026-02-19 03:39:42] 2026-02-19 02:38:30,815 | INFO     | mean x: 1771458425.0
[2026-02-19 03:39:42] 2026-02-19 02:38:30,815 | INFO     | mean y: 2561517.2106824927
[2026-02-19 03:39:42] 2026-02-19 02:38:30,816 | INFO     | intersect: 6569766139.318004
[2026-02-19 03:39:42] 2026-02-19 02:38:30,816 | INFO     | chi2: 0.926194521569117
[2026-02-19 03:39:42] 2026-02-19 02:38:30,816 | INFO     | current chi2=0.926194521569117 (change=32.296491493118154 %)
[2026-02-19 03:39:42] 2026-02-19 02:38:30,817 | INFO     | sum of square deviations: 11347200663.0
[2026-02-19 03:39:42] 2026-02-19 02:38:30,821 | INFO     | sum of deviations: -38946756040.50001
[2026-02-19 03:39:42] 2026-02-19 02:38:30,821 | INFO     | mean x: 1771458577.5
[2026-02-19 03:39:42] 2026-02-19 02:38:30,821 | INFO     | mean y: 2560025.8403614457
[2026-02-19 03:39:42] 2026-02-19 02:38:30,821 | INFO     | intersect: 6082699709.869114
[2026-02-19 03:39:42] 2026-02-19 02:38:30,822 | INFO     | chi2: 0.9114298715047078
[2026-02-19 03:39:42] 2026-02-19 02:38:30,822 | INFO     | current chi2=0.9114298715047078 (change=1.594119779438512 %)
[2026-02-19 03:39:42] 2026-02-19 02:38:30,822 | INFO     | left removable region: 30
[2026-02-19 03:39:42] 2026-02-19 02:38:30,823 | INFO     | sum of square deviations: 9327281860.0
[2026-02-19 03:39:42] 2026-02-19 02:38:30,826 | INFO     | sum of deviations: 15956494009.0
[2026-02-19 03:39:42] 2026-02-19 02:38:30,826 | INFO     | mean x: 1771458852.0
[2026-02-19 03:39:42] 2026-02-19 02:38:30,827 | INFO     | mean y: 2556582.504823151
[2026-02-19 03:39:42] 2026-02-19 02:38:30,827 | INFO     | intersect: -3027937508.2064033
[2026-02-19 03:39:42] 2026-02-19 02:38:30,827 | INFO     | chi2: 0.015524585406945532
[2026-02-19 03:39:42] 2026-02-19 02:38:30,827 | INFO     | current memory leak: 1.71 B/s (using 311 data points, chi2=0.02)
[2026-02-19 03:39:42] 2026-02-19 02:38:30,828 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-02-19 03:39:42] 2026-02-19 02:38:30,828 | INFO     | ..............................
[2026-02-19 03:39:42] 2026-02-19 02:38:30,828 | INFO     | . Timing measurements:
[2026-02-19 03:39:42] 2026-02-19 02:38:30,829 | INFO     | . get job = 0 s
[2026-02-19 03:39:42] 2026-02-19 02:38:30,829 | INFO     | . initial setup = 100 s
[2026-02-19 03:39:42] 2026-02-19 02:38:30,829 | INFO     | . payload setup = 124 s
[2026-02-19 03:39:42] 2026-02-19 02:38:30,829 | INFO     | . stage-in = 0 s
[2026-02-19 03:39:42] 2026-02-19 02:38:30,829 | INFO     | . payload execution = 21251 s
[2026-02-19 03:39:42] 2026-02-19 02:38:30,829 | INFO     | . stage-out = 2 s
[2026-02-19 03:39:42] 2026-02-19 02:38:30,829 | INFO     | . log creation = 0 s
[2026-02-19 03:39:42] 2026-02-19 02:38:30,829 | INFO     | ..............................
[2026-02-19 03:39:42] 2026-02-19 02:38:30,962 | INFO     | 
[2026-02-19 03:39:42] 2026-02-19 02:38:30,963 | INFO     | job summary report
[2026-02-19 03:39:42] 2026-02-19 02:38:30,963 | INFO     | --------------------------------------------------
[2026-02-19 03:39:42] 2026-02-19 02:38:30,963 | INFO     | PanDA job id: 7018853390
[2026-02-19 03:39:42] 2026-02-19 02:38:30,963 | INFO     | task id: 48508763
[2026-02-19 03:39:42] 2026-02-19 02:38:30,963 | INFO     | errors: (none)
[2026-02-19 03:39:42] 2026-02-19 02:38:30,963 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-19 03:39:42] 2026-02-19 02:38:30,963 | INFO     | pilot state: finished 
[2026-02-19 03:39:42] 2026-02-19 02:38:30,963 | INFO     | transexitcode: 0
[2026-02-19 03:39:42] 2026-02-19 02:38:30,964 | INFO     | exeerrorcode: 0
[2026-02-19 03:39:42] 2026-02-19 02:38:30,964 | INFO     | exeerrordiag: 
[2026-02-19 03:39:42] 2026-02-19 02:38:30,964 | INFO     | exitcode: 0
[2026-02-19 03:39:42] 2026-02-19 02:38:30,964 | INFO     | exitmsg: OK
[2026-02-19 03:39:42] 2026-02-19 02:38:30,964 | INFO     | cpuconsumptiontime: 81710 s
[2026-02-19 03:39:42] 2026-02-19 02:38:30,964 | INFO     | nevents: 400
[2026-02-19 03:39:42] 2026-02-19 02:38:30,964 | INFO     | neventsw: 0
[2026-02-19 03:39:42] 2026-02-19 02:38:30,964 | INFO     | pid: 6972
[2026-02-19 03:39:42] 2026-02-19 02:38:30,964 | INFO     | pgrp: 6972
[2026-02-19 03:39:42] 2026-02-19 02:38:30,964 | INFO     | corecount: 8
[2026-02-19 03:39:42] 2026-02-19 02:38:30,964 | INFO     | event service: False
[2026-02-19 03:39:42] 2026-02-19 02:38:30,965 | INFO     | sizes: {0: 2281828, 1: 2282229, 2: 2282289, 12: 2282317, 21379: 2315951, 21380: 2315950, 21382: 2325134, 21385: 2325384}
[2026-02-19 03:39:42] 2026-02-19 02:38:30,965 | INFO     | --------------------------------------------------
[2026-02-19 03:39:42] 2026-02-19 02:38:30,965 | INFO     | 
[2026-02-19 03:39:42] 2026-02-19 02:38:30,965 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-02-19 03:39:42] 2026-02-19 02:38:31,163 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-19 03:39:42] 2026-02-19 02:38:31,163 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-19 03:39:42] 2026-02-19 02:38:31,163 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-19 03:39:42] 2026-02-19 02:38:31,163 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-19 03:39:42] 2026-02-19 02:38:31,163 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-19 03:39:42] 2026-02-19 02:38:31,163 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-19 03:39:42] 2026-02-19 02:38:31,163 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-19 03:39:42] 2026-02-19 02:38:31,163 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-19 03:39:42] 2026-02-19 02:38:31,163 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-19 03:39:42] 2026-02-19 02:38:31,164 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-19 03:39:42] 2026-02-19 02:38:31,164 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-19 03:39:42] 2026-02-19 02:38:31,164 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-19 03:39:42] 2026-02-19 02:38:31,164 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-19 03:39:42] 2026-02-19 02:38:31,164 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-19 03:39:42] 2026-02-19 02:38:31,164 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-19 03:39:42] 2026-02-19 02:38:31,164 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-19 03:39:42] 2026-02-19 02:38:31,164 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-19 03:39:42] 2026-02-19 02:38:31,164 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-19 03:39:42] 2026-02-19 02:38:31,164 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-19 03:39:42] 2026-02-19 02:38:31,164 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-19 03:39:42] 2026-02-19 02:38:31,164 | INFO     | job 7018853390 has completed (purged errors)
[2026-02-19 03:39:42] 2026-02-19 02:38:31,165 | INFO     | overall cleanup function is called
[2026-02-19 03:39:42] 2026-02-19 02:38:32,172 | INFO     | --- collectZombieJob: --- 10, [6972]
[2026-02-19 03:39:42] 2026-02-19 02:38:32,173 | INFO     | zombie collector waiting for pid 6972
[2026-02-19 03:39:42] 2026-02-19 02:38:32,173 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-19 03:39:42] 2026-02-19 02:38:32,173 | INFO     | collected zombie processes
[2026-02-19 03:39:42] 2026-02-19 02:38:32,173 | INFO     | will attempt to kill all subprocesses of pid=6972
[2026-02-19 03:39:42] 2026-02-19 02:38:32,283 | INFO     | process IDs to be killed: [6972] (in reverse order)
[2026-02-19 03:39:42] 2026-02-19 02:38:32,357 | WARNING  | found no corresponding commands to process id(s)
[2026-02-19 03:39:42] 2026-02-19 02:38:32,357 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-19 03:39:42] 2026-02-19 02:38:32,363 | INFO     | did not find any defunct processes belonging to 6972
[2026-02-19 03:39:42] 2026-02-19 02:38:32,367 | INFO     | did not find any defunct processes belonging to 6972
[2026-02-19 03:39:42] 2026-02-19 02:38:32,367 | INFO     | ready for new job
[2026-02-19 03:39:42] 2026-02-19 02:38:32,367 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-19 03:39:42] 2026-02-19 02:38:32,370 | INFO     | **************************************
[2026-02-19 03:39:42] 2026-02-19 02:38:32,370 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-19 03:39:42] 2026-02-19 02:38:32,370 | INFO     | **************************************
[2026-02-19 03:39:42] 2026-02-19 02:38:32,370 | INFO     | 
[2026-02-19 03:39:42] 2026-02-19 02:38:32,371 | INFO     | pilot is running in a VM
[2026-02-19 03:39:42] 2026-02-19 02:38:32,371 | INFO     | architecture information:
[2026-02-19 03:39:42] 2026-02-19 02:38:32,371 | INFO     | executing command: cat /etc/os-release
[2026-02-19 03:39:42] 2026-02-19 02:38:32,390 | INFO     | cat /etc/os-release:
[2026-02-19 03:39:42] NAME="CentOS Linux"
[2026-02-19 03:39:42] VERSION="7 (Core)"
[2026-02-19 03:39:42] ID="centos"
[2026-02-19 03:39:42] ID_LIKE="rhel fedora"
[2026-02-19 03:39:42] VERSION_ID="7"
[2026-02-19 03:39:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-19 03:39:42] ANSI_COLOR="0;31"
[2026-02-19 03:39:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-19 03:39:42] HOME_URL="https://www.centos.org/"
[2026-02-19 03:39:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-19 03:39:42] 
[2026-02-19 03:39:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-19 03:39:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-19 03:39:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-19 03:39:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-19 03:39:42] 
[2026-02-19 03:39:42] 2026-02-19 02:38:32,391 | INFO     | **************************************
[2026-02-19 03:39:42] 2026-02-19 02:38:32,895 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-02-19 03:39:42] 2026-02-19 02:38:33,117 | INFO     | sufficient remaining disk space (492786679808 B)
[2026-02-19 03:39:42] 2026-02-19 02:38:33,117 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-19 03:39:42] 2026-02-19 02:38:33,117 | INFO     | current server update state: UPDATING_FINAL
[2026-02-19 03:39:42] 2026-02-19 02:38:33,117 | INFO     | update_server=False
[2026-02-19 03:39:42] 2026-02-19 02:38:33,118 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-19 03:39:42] 2026-02-19 02:38:33,118 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-19 03:39:42] 2026-02-19 02:38:33,237 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-19 03:39:42] 2026-02-19 02:38:33,477 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-19 03:39:42] 2026-02-19 02:38:33,478 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-19 03:39:42] 2026-02-19 02:38:33,478 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-19 03:39:42] 2026-02-19 02:38:33,478 | INFO     | will abort loop
[2026-02-19 03:39:42] 2026-02-19 02:38:34,080 | INFO     | all data control threads have been joined
[2026-02-19 03:39:42] 2026-02-19 02:38:34,124 | INFO     | [job] retrieve thread has finished
[2026-02-19 03:39:42] 2026-02-19 02:38:34,201 | INFO     | [payload] validate_post thread has finished
[2026-02-19 03:39:42] 2026-02-19 02:38:34,228 | INFO     | [payload] validate_pre thread has finished
[2026-02-19 03:39:42] 2026-02-19 02:38:34,406 | INFO     | all payload control threads have been joined
[2026-02-19 03:39:42] 2026-02-19 02:38:34,483 | INFO     | [job] job monitor thread has finished
[2026-02-19 03:39:42] 2026-02-19 02:38:34,502 | INFO     | all job control threads have been joined
[2026-02-19 03:39:42] 2026-02-19 02:38:34,763 | INFO     | [job] validate thread has finished
[2026-02-19 03:39:42] 2026-02-19 02:38:34,868 | INFO     | [data] copytool_in thread has finished
[2026-02-19 03:39:42] 2026-02-19 02:38:35,024 | INFO     | [payload] execute_payloads thread has finished
[2026-02-19 03:39:42] 2026-02-19 02:38:35,086 | INFO     | [data] control thread has finished
[2026-02-19 03:39:42] 2026-02-19 02:38:35,128 | INFO     | [job] create_data_payload thread has finished
[2026-02-19 03:39:42] 2026-02-19 02:38:35,244 | INFO     | [data] copytool_out thread has finished
[2026-02-19 03:39:42] 2026-02-19 02:38:35,412 | INFO     | [payload] control thread has finished
[2026-02-19 03:39:42] 2026-02-19 02:38:35,508 | INFO     | [job] control thread has finished
[2026-02-19 03:39:42] 2026-02-19 02:38:35,580 | INFO     | [payload] failed_post thread has finished
[2026-02-19 03:39:42] 2026-02-19 02:38:35,616 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-19 03:39:42] 2026-02-19 02:38:35,990 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-19 03:39:42] 2026-02-19 02:38:36,996 | INFO     | [job] queue monitor thread has finished
[2026-02-19 03:39:42] 2026-02-19 02:38:37,130 | INFO     | [data] queue_monitor thread has finished
[2026-02-19 03:39:42] 2026-02-19 02:39:03,200 | INFO     | PID=2469 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-19 03:39:42] 2026-02-19 02:39:03,200 | INFO     | .. there are 9 such processes running
[2026-02-19 03:39:42] 2026-02-19 02:39:03,201 | INFO     | found 0 job(s) in 20 queues
[2026-02-19 03:39:42] 2026-02-19 02:39:03,201 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-19 03:39:42] 2026-02-19 02:39:03,201 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-19 03:39:42] 2026-02-19 02:39:29,769 | INFO     | [monitor] cgroup control has ended
[2026-02-19 03:39:42] 2026-02-19 02:39:31,871 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140531200808768)>', '<ExcThread(monitor, started 140530751088384)>']
[2026-02-19 03:39:42] 2026-02-19 02:39:32,376 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-19 03:39:42] 2026-02-19 02:39:32,377 | INFO     | [monitor] control thread has ended
[2026-02-19 03:39:42] 2026-02-19 02:39:36,897 | INFO     | all workflow threads have been joined
[2026-02-19 03:39:42] 2026-02-19 02:39:36,898 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-19 03:39:42] 2026-02-19 02:39:36,898 | INFO     | traces error code: 0
[2026-02-19 03:39:42] 2026-02-19 02:39:36,898 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-19 03:39:42] 2026-02-19 02:39:37,268 [wrapper] ==== pilot stdout END ====
[2026-02-19 03:39:42] 2026-02-19 02:39:37,347 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-19 03:39:42] 2026-02-19 02:39:37,510 [wrapper] pilotpid: 2469
[2026-02-19 03:39:42] 2026-02-19 02:39:37,624 [wrapper] Pilot exit status: 0
[2026-02-19 03:39:42] 2026-02-19 02:39:38,150 [wrapper] pandaids: 7018853390
[2026-02-19 03:39:42] 2026-02-19 02:39:39,232 [wrapper] cleanup supervisor_pilot 15378 2470
[2026-02-19 03:39:42] 2026-02-19 02:39:39,336 [wrapper] Test setup, not cleaning
[2026-02-19 03:39:42] 2026-02-19 02:39:39,466 [wrapper] apfmon messages muted
[2026-02-19 03:39:42] 2026-02-19 02:39:39,542 [wrapper] ==== wrapper stdout END ====
[2026-02-19 03:39:42] 2026-02-19 02:39:39,623 [wrapper] ==== wrapper stderr END ====
[2026-02-19 03:39:42]  *** Error codes and diagnostics ***
[2026-02-19 03:39:42]     "exeErrorCode": 0,
[2026-02-19 03:39:42]     "exeErrorDiag": "",
[2026-02-19 03:39:42]     "pilotErrorCode": 0,
[2026-02-19 03:39:42]     "pilotErrorDiag": "",
[2026-02-19 03:39:42]  *** Listing of results directory ***
[2026-02-19 03:39:42] total 942796
[2026-02-19 03:39:42] -rw-r--r--. 1 boinc boinc      5111 Feb 18 03:39 queuedata.json
[2026-02-19 03:39:42] -rw-r--r--. 1 boinc boinc    584627 Feb 18 03:39 pilot3.tar.gz
[2026-02-19 03:39:42] -rwx------. 1 boinc boinc     36322 Feb 18 03:39 runpilot2-wrapper.sh
[2026-02-19 03:39:42] -rw-r--r--. 1 boinc boinc       100 Feb 18 21:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-19 03:39:42] -rwxr-xr-x. 1 boinc boinc      7986 Feb 18 21:36 run_atlas
[2026-02-19 03:39:42] -rw-r--r--. 1 boinc boinc       105 Feb 18 21:36 job.xml
[2026-02-19 03:39:42] -rw-r--r--. 1 boinc boinc      6392 Feb 18 21:36 init_data.xml
[2026-02-19 03:39:42] -rw-r--r--. 2 boinc boinc 683286862 Feb 18 21:36 EVNT.48508760._000500.pool.root.1
[2026-02-19 03:39:42] -rw-r--r--. 2 boinc boinc     15845 Feb 18 21:36 start_atlas.sh
[2026-02-19 03:39:42] drwxrwx--x. 2 boinc boinc        68 Feb 18 21:36 shared
[2026-02-19 03:39:42] -rw-r--r--. 2 boinc boinc    597954 Feb 18 21:36 input.tar.gz
[2026-02-19 03:39:42] -rw-r--r--. 1 boinc boinc         0 Feb 18 21:36 boinc_lockfile
[2026-02-19 03:39:42] -rw-r--r--. 1 boinc boinc      2551 Feb 18 21:36 pandaJob.out
[2026-02-19 03:39:42] -rw-------. 1 boinc boinc       415 Feb 18 21:41 workernode_map.json
[2026-02-19 03:39:42] -rw-------. 1 boinc boinc   1001034 Feb 18 21:41 agis_schedconf.cvmfs.json
[2026-02-19 03:39:42] drwx------. 5 boinc boinc      4096 Feb 18 21:41 pilot3
[2026-02-19 03:39:42] -rw-r--r--. 1 boinc boinc       531 Feb 19 03:37 boinc_task_state.xml
[2026-02-19 03:39:42] -rw-------. 1 boinc boinc 271123147 Feb 19 03:37 HITS.48508763._025587.pool.root.1
[2026-02-19 03:39:42] -rw-------. 1 boinc boinc      1018 Feb 19 03:38 memory_monitor_summary.json
[2026-02-19 03:39:42] -rw-------. 1 boinc boinc   1513015 Feb 19 03:38 agis_ddmendpoints.agis.ALL.json
[2026-02-19 03:39:42] -rw-------. 1 boinc boinc    587850 Feb 19 03:38 log.48508763._025587.job.log.tgz.1
[2026-02-19 03:39:42] -rw-------. 1 boinc boinc      6322 Feb 19 03:38 heartbeat.json
[2026-02-19 03:39:42] -rw-------. 1 boinc boinc        95 Feb 19 03:39 pilot_heartbeat.json
[2026-02-19 03:39:42] -rw-r--r--. 1 boinc boinc      8192 Feb 19 03:39 boinc_mmap_file
[2026-02-19 03:39:42] -rw-r--r--. 1 boinc boinc        28 Feb 19 03:39 wrapper_checkpoint.txt
[2026-02-19 03:39:42] -rw-------. 1 boinc boinc      5066 Feb 19 03:39 pilotlog.txt
[2026-02-19 03:39:42] -rw-------. 1 boinc boinc   2958037 Feb 19 03:39 log.48508763._025587.job.log.1
[2026-02-19 03:39:42] -rw-------. 1 boinc boinc       357 Feb 19 03:39 output.list
[2026-02-19 03:39:42] -rw-r--r--. 1 boinc boinc       620 Feb 19 03:39 runtime_log
[2026-02-19 03:39:42] -rw-------. 1 boinc boinc   3563520 Feb 19 03:39 result.tar.gz
[2026-02-19 03:39:42] -rw-------. 1 boinc boinc       657 Feb 19 03:39 WQkLDm9dmC9n9Rq4apOajLDm4fhM0noT9bVooX4SDmNutKDm65M8hn.diag
[2026-02-19 03:39:42] -rw-r--r--. 1 boinc boinc      8832 Feb 19 03:39 runtime_log.err
[2026-02-19 03:39:42] -rw-r--r--. 1 boinc boinc     20722 Feb 19 03:39 stderr.txt
[2026-02-19 03:39:42] HITS file was successfully produced:
[2026-02-19 03:39:42] -rw-------. 1 boinc boinc 271123147 Feb 19 03:37 shared/HITS.pool.root.1
[2026-02-19 03:39:42]  *** Contents of shared directory: ***
[2026-02-19 03:39:42] total 936128
[2026-02-19 03:39:42] -rw-r--r--. 2 boinc boinc 683286862 Feb 18 21:36 ATLAS.root_0
[2026-02-19 03:39:42] -rw-r--r--. 2 boinc boinc     15845 Feb 18 21:36 start_atlas.sh
[2026-02-19 03:39:42] -rw-r--r--. 2 boinc boinc    597954 Feb 18 21:36 input.tar.gz
[2026-02-19 03:39:42] -rw-------. 1 boinc boinc 271123147 Feb 19 03:37 HITS.pool.root.1
[2026-02-19 03:39:42] -rw-------. 1 boinc boinc   3563520 Feb 19 03:39 result.tar.gz
03:39:43 (31027): run_atlas exited; CPU time 82048.879608
03:39:43 (31027): called boinc_finish(0)

</stderr_txt>
]]>

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