Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:11:34 (131902): wrapper (7.7.26015): starting
20:11:34 (131902): wrapper: running run_atlas (--nthreads 2)
[2026-02-18 20:11:34] Arguments: --nthreads 2
[2026-02-18 20:11:34] Threads: 2
[2026-02-18 20:11:34] Checking for CVMFS
[2026-02-18 20:11:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-18 20:11:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-18 20:11:34] Running cvmfs_config stat atlas.cern.ch
[2026-02-18 20:11:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-18 20:11:34] 2.9.2.0 3849744 5519 61632 156379 1 49 24104768 36864001 0 130560 0 1400635 99.978 175264 17609 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-18 20:11:34] CVMFS is ok
[2026-02-18 20:11:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-18 20:11:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-18 20:11:34] Further information can be found at the LHC@home message board.
[2026-02-18 20:11:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-18 20:11:34] Checking for apptainer binary...
[2026-02-18 20:11:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-18 20:11:34] Running /usr/bin/apptainer --version
[2026-02-18 20:11:34] apptainer version 1.4.1-1.1
[2026-02-18 20:11:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-18 20:11:34] madmaxA277a
[2026-02-18 20:11:34] apptainer works
[2026-02-18 20:11:34] Set ATHENA_PROC_NUMBER=2
[2026-02-18 20:11:34] Set ATHENA_CORE_NUMBER=2
[2026-02-18 20:11:34] Starting ATLAS job with PandaID=7018727047
[2026-02-18 20:11:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-18 23:13:16]  *** The last 200 lines of the pilot log: ***
[2026-02-18 23:13:16] 2026-02-18 22:12:16,875 | INFO     | --- collectZombieJob: --- 10, [140332]
[2026-02-18 23:13:16] 2026-02-18 22:12:16,875 | INFO     | zombie collector waiting for pid 140332
[2026-02-18 23:13:16] 2026-02-18 22:12:16,875 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-18 23:13:16] 2026-02-18 22:12:16,876 | INFO     | collected zombie processes
[2026-02-18 23:13:16] 2026-02-18 22:12:16,876 | INFO     | will attempt to kill all subprocesses of pid=140332
[2026-02-18 23:13:16] 2026-02-18 22:12:16,906 | INFO     | process IDs to be killed: [140332] (in reverse order)
[2026-02-18 23:13:16] 2026-02-18 22:12:16,926 | WARNING  | found no corresponding commands to process id(s)
[2026-02-18 23:13:16] 2026-02-18 22:12:16,926 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-18 23:13:16] 2026-02-18 22:12:16,927 | INFO     | did not find any defunct processes belonging to 140332
[2026-02-18 23:13:16] 2026-02-18 22:12:16,927 | INFO     | did not find any defunct processes belonging to 140332
[2026-02-18 23:13:16] 2026-02-18 22:12:16,927 | INFO     | ready for new job
[2026-02-18 23:13:16] 2026-02-18 22:12:16,927 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-18 23:13:16] 2026-02-18 22:12:16,928 | INFO     | **************************************
[2026-02-18 23:13:16] 2026-02-18 22:12:16,928 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-18 23:13:16] 2026-02-18 22:12:16,928 | INFO     | **************************************
[2026-02-18 23:13:16] 2026-02-18 22:12:16,928 | INFO     | 
[2026-02-18 23:13:16] 2026-02-18 22:12:16,928 | INFO     | architecture information:
[2026-02-18 23:13:16] 2026-02-18 22:12:16,928 | INFO     | executing command: cat /etc/os-release
[2026-02-18 23:13:16] 2026-02-18 22:12:16,937 | INFO     | cat /etc/os-release:
[2026-02-18 23:13:16] NAME="CentOS Linux"
[2026-02-18 23:13:16] VERSION="7 (Core)"
[2026-02-18 23:13:16] ID="centos"
[2026-02-18 23:13:16] ID_LIKE="rhel fedora"
[2026-02-18 23:13:16] VERSION_ID="7"
[2026-02-18 23:13:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-18 23:13:16] ANSI_COLOR="0;31"
[2026-02-18 23:13:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-18 23:13:16] HOME_URL="https://www.centos.org/"
[2026-02-18 23:13:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-18 23:13:16] 
[2026-02-18 23:13:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-18 23:13:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-18 23:13:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-18 23:13:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-18 23:13:16] 
[2026-02-18 23:13:16] 2026-02-18 22:12:16,937 | INFO     | **************************************
[2026-02-18 23:13:16] 2026-02-18 22:12:17,440 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-18 23:13:16] 2026-02-18 22:12:17,452 | INFO     | sufficient remaining disk space (491215912960 B)
[2026-02-18 23:13:16] 2026-02-18 22:12:17,452 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-18 23:13:16] 2026-02-18 22:12:17,452 | INFO     | current server update state: UPDATING_FINAL
[2026-02-18 23:13:16] 2026-02-18 22:12:17,452 | INFO     | update_server=False
[2026-02-18 23:13:16] 2026-02-18 22:12:17,452 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-18 23:13:16] 2026-02-18 22:12:17,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-18 23:13:16] 2026-02-18 22:12:17,452 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-18 23:13:16] 2026-02-18 22:12:17,452 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-18 23:13:16] 2026-02-18 22:12:17,452 | INFO     | aborting loop
[2026-02-18 23:13:16] 2026-02-18 22:12:18,371 | INFO     | all data control threads have been joined
[2026-02-18 23:13:16] 2026-02-18 22:12:18,457 | INFO     | [job] retrieve thread has finished
[2026-02-18 23:13:16] 2026-02-18 22:12:18,458 | INFO     | [job] queue monitor thread has finished
[2026-02-18 23:13:16] 2026-02-18 22:12:18,459 | INFO     | [job] job monitor thread has finished
[2026-02-18 23:13:16] 2026-02-18 22:12:18,522 | INFO     | all payload control threads have been joined
[2026-02-18 23:13:16] 2026-02-18 22:12:18,543 | INFO     | [payload] execute_payloads thread has finished
[2026-02-18 23:13:16] 2026-02-18 22:12:18,556 | INFO     | [payload] failed_post thread has finished
[2026-02-18 23:13:16] 2026-02-18 22:12:18,574 | INFO     | all job control threads have been joined
[2026-02-18 23:13:16] 2026-02-18 22:12:19,043 | INFO     | [job] validate thread has finished
[2026-02-18 23:13:16] 2026-02-18 22:12:19,095 | INFO     | [payload] validate_post thread has finished
[2026-02-18 23:13:16] 2026-02-18 22:12:19,108 | INFO     | [payload] validate_pre thread has finished
[2026-02-18 23:13:16] 2026-02-18 22:12:19,115 | INFO     | [job] create_data_payload thread has finished
[2026-02-18 23:13:16] 2026-02-18 22:12:19,377 | INFO     | [data] control thread has finished
[2026-02-18 23:13:16] 2026-02-18 22:12:19,450 | INFO     | [data] copytool_in thread has finished
[2026-02-18 23:13:16] 2026-02-18 22:12:19,458 | INFO     | [data] copytool_out thread has finished
[2026-02-18 23:13:16] 2026-02-18 22:12:19,477 | INFO     | job.realtimelogging is not enabled
[2026-02-18 23:13:16] 2026-02-18 22:12:19,527 | INFO     | [payload] control thread has finished
[2026-02-18 23:13:16] 2026-02-18 22:12:19,580 | INFO     | [job] control thread has finished
[2026-02-18 23:13:16] 2026-02-18 22:12:20,141 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-18 23:13:16] 2026-02-18 22:12:20,482 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-18 23:13:16] 2026-02-18 22:12:24,147 | INFO     | [data] queue_monitor thread has finished
[2026-02-18 23:13:16] 2026-02-18 22:12:46,963 | INFO     | PID=135925 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-18 23:13:16] 2026-02-18 22:12:46,963 | INFO     | found 0 job(s) in 20 queues
[2026-02-18 23:13:16] 2026-02-18 22:12:46,963 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-18 23:13:16] 2026-02-18 22:12:46,963 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-18 23:13:16] 2026-02-18 22:13:10,055 | INFO     | [monitor] cgroup control has ended
[2026-02-18 23:13:16] 2026-02-18 22:13:11,484 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140154866710336)>', '<ExcThread(monitor, started 140153565734656)>']
[2026-02-18 23:13:16] 2026-02-18 22:13:12,098 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-18 23:13:16] 2026-02-18 22:13:12,098 | INFO     | [monitor] control thread has ended
[2026-02-18 23:13:16] 2026-02-18 22:13:16,510 | INFO     | all workflow threads have been joined
[2026-02-18 23:13:16] 2026-02-18 22:13:16,511 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-18 23:13:16] 2026-02-18 22:13:16,511 | INFO     | traces error code: 0
[2026-02-18 23:13:16] 2026-02-18 22:13:16,511 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-18 23:13:16] 2026-02-18 22:13:16,615 [wrapper] ==== pilot stdout END ====
[2026-02-18 23:13:16] 2026-02-18 22:13:16,617 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-18 23:13:16] 2026-02-18 22:13:16,620 [wrapper] pilotpid: 135925
[2026-02-18 23:13:16] 2026-02-18 22:13:16,622 [wrapper] Pilot exit status: 0
[2026-02-18 23:13:16] 2026-02-18 22:13:16,629 [wrapper] pandaids: 7018727047
[2026-02-18 23:13:16] 2026-02-18 22:13:16,656 [wrapper] cleanup supervisor_pilot  145745 135926
[2026-02-18 23:13:16] 2026-02-18 22:13:16,660 [wrapper] Test setup, not cleaning
[2026-02-18 23:13:16] 2026-02-18 22:13:16,665 [wrapper] apfmon messages muted
[2026-02-18 23:13:16] 2026-02-18 22:13:16,669 [wrapper] ==== wrapper stdout END ====
[2026-02-18 23:13:16] 2026-02-18 22:13:16,673 [wrapper] ==== wrapper stderr END ====
[2026-02-18 23:13:16]  *** Error codes and diagnostics ***
[2026-02-18 23:13:16]     "exeErrorCode": 0,
[2026-02-18 23:13:16]     "exeErrorDiag": "",
[2026-02-18 23:13:16]     "pilotErrorCode": 0,
[2026-02-18 23:13:16]     "pilotErrorDiag": "",
[2026-02-18 23:13:16]  *** Listing of results directory ***
[2026-02-18 23:13:16] total 935456
[2026-02-18 23:13:16] -rwx------ 1 boinc boinc     36322 Feb 17 21:44 runpilot2-wrapper.sh
[2026-02-18 23:13:16] -rw-r--r-- 1 boinc boinc    584627 Feb 17 21:47 pilot3.tar.gz
[2026-02-18 23:13:16] -rw-r--r-- 1 boinc boinc      5111 Feb 17 21:48 queuedata.json
[2026-02-18 23:13:16] -rw-r--r-- 1 boinc boinc       100 Feb 18 20:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-18 23:13:16] -rwxr-xr-x 1 boinc boinc      7986 Feb 18 20:11 run_atlas
[2026-02-18 23:13:16] -rw-r--r-- 1 boinc boinc       105 Feb 18 20:11 job.xml
[2026-02-18 23:13:16] -rw-r--r-- 2 boinc boinc 677303823 Feb 18 20:11 EVNT.48508760._000466.pool.root.1
[2026-02-18 23:13:16] -rw-r--r-- 2 boinc boinc    597949 Feb 18 20:11 input.tar.gz
[2026-02-18 23:13:16] -rw-r--r-- 2 boinc boinc     15845 Feb 18 20:11 start_atlas.sh
[2026-02-18 23:13:16] drwxrwx--x 2 boinc boinc      4096 Feb 18 20:11 shared
[2026-02-18 23:13:16] -rw-r--r-- 1 boinc boinc         0 Feb 18 20:11 boinc_setup_complete
[2026-02-18 23:13:16] -rw-r--r-- 1 boinc boinc      6210 Feb 18 20:11 init_data.xml
[2026-02-18 23:13:16] -rw-r--r-- 1 boinc boinc         0 Feb 18 20:11 boinc_lockfile
[2026-02-18 23:13:16] -rw-r--r-- 1 boinc boinc      2550 Feb 18 20:11 pandaJob.out
[2026-02-18 23:13:16] -rw------- 1 boinc boinc   1001034 Feb 18 20:11 agis_schedconf.cvmfs.json
[2026-02-18 23:13:16] -rw------- 1 boinc boinc       430 Feb 18 20:11 workernode_map.json
[2026-02-18 23:13:16] drwx------ 5 boinc boinc      4096 Feb 18 20:11 pilot3
[2026-02-18 23:13:16] -rw------- 1 boinc boinc 272992004 Feb 18 23:11 HITS.48508763._023824.pool.root.1
[2026-02-18 23:13:16] -rw-r--r-- 1 boinc boinc       531 Feb 18 23:11 boinc_task_state.xml
[2026-02-18 23:13:16] -rw------- 1 boinc boinc      1019 Feb 18 23:12 memory_monitor_summary.json
[2026-02-18 23:13:16] -rw------- 1 boinc boinc   1513015 Feb 18 23:12 agis_ddmendpoints.agis.ALL.json
[2026-02-18 23:13:16] -rw------- 1 boinc boinc    313017 Feb 18 23:12 log.48508763._023824.job.log.tgz.1
[2026-02-18 23:13:16] -rw------- 1 boinc boinc      6322 Feb 18 23:12 heartbeat.json
[2026-02-18 23:13:16] -rw------- 1 boinc boinc        95 Feb 18 23:12 pilot_heartbeat.json
[2026-02-18 23:13:16] -rw-r--r-- 1 boinc boinc      8192 Feb 18 23:12 boinc_mmap_file
[2026-02-18 23:13:16] -rw-r--r-- 1 boinc boinc        28 Feb 18 23:12 wrapper_checkpoint.txt
[2026-02-18 23:13:16] -rw------- 1 boinc boinc      4819 Feb 18 23:13 pilotlog.txt
[2026-02-18 23:13:16] -rw------- 1 boinc boinc   1531828 Feb 18 23:13 log.48508763._023824.job.log.1
[2026-02-18 23:13:16] -rw------- 1 boinc boinc       357 Feb 18 23:13 output.list
[2026-02-18 23:13:16] -rw-r--r-- 1 boinc boinc       620 Feb 18 23:13 runtime_log
[2026-02-18 23:13:16] -rw------- 1 boinc boinc   1863680 Feb 18 23:13 result.tar.gz
[2026-02-18 23:13:16] -rw-r--r-- 1 boinc boinc      8922 Feb 18 23:13 runtime_log.err
[2026-02-18 23:13:16] -rw------- 1 boinc boinc       664 Feb 18 23:13 2kFODmN7gC9n9Rq4apOajLDm4fhM0noT9bVooX4SDmNgtKDmMfLfNo.diag
[2026-02-18 23:13:16] -rw-r--r-- 1 boinc boinc     10700 Feb 18 23:13 stderr.txt
[2026-02-18 23:13:16] HITS file was successfully produced:
[2026-02-18 23:13:16] -rw------- 1 boinc boinc 272992004 Feb 18 23:11 shared/HITS.pool.root.1
[2026-02-18 23:13:16]  *** Contents of shared directory: ***
[2026-02-18 23:13:16] total 930456
[2026-02-18 23:13:16] -rw-r--r-- 2 boinc boinc 677303823 Feb 18 20:11 ATLAS.root_0
[2026-02-18 23:13:16] -rw-r--r-- 2 boinc boinc    597949 Feb 18 20:11 input.tar.gz
[2026-02-18 23:13:16] -rw-r--r-- 2 boinc boinc     15845 Feb 18 20:11 start_atlas.sh
[2026-02-18 23:13:16] -rw------- 1 boinc boinc 272992004 Feb 18 23:11 HITS.pool.root.1
[2026-02-18 23:13:16] -rw------- 1 boinc boinc   1863680 Feb 18 23:13 result.tar.gz
23:13:18 (131902): run_atlas exited; CPU time 21219.116040
23:13:18 (131902): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN