Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:52:45 (961772): wrapper (7.7.26015): starting
16:52:45 (961772): wrapper: running run_atlas (--nthreads 3)
[2026-02-18 16:52:45] Arguments: --nthreads 3
[2026-02-18 16:52:45] Threads: 3
[2026-02-18 16:52:45] Checking for CVMFS
[2026-02-18 16:52:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-18 16:52:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-18 16:52:46] Running cvmfs_config stat atlas.cern.ch
[2026-02-18 16:52:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-18 16:52:46] 2.9.2.0 241658 5349 82248 156374 1 50 28647197 36864001 0 130560 0 2054180 99.985 177013 14565 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-18 16:52:46] CVMFS is ok
[2026-02-18 16:52:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-18 16:52:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-18 16:52:46] Further information can be found at the LHC@home message board.
[2026-02-18 16:52:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-18 16:52:46] Checking for apptainer binary...
[2026-02-18 16:52:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-18 16:52:46] Running /usr/bin/apptainer --version
[2026-02-18 16:52:46] apptainer version 1.4.1-1.1
[2026-02-18 16:52:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-18 16:52:46] magicA161a
[2026-02-18 16:52:46] apptainer works
[2026-02-18 16:52:46] Set ATHENA_PROC_NUMBER=3
[2026-02-18 16:52:46] Set ATHENA_CORE_NUMBER=3
[2026-02-18 16:52:46] Starting ATLAS job with PandaID=7018452114
[2026-02-18 16:52:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-18 18:50:23]  *** The last 200 lines of the pilot log: ***
[2026-02-18 18:50:23] 2026-02-18 17:49:52,531 | INFO     | executing command: cat /etc/os-release
[2026-02-18 18:50:23] 2026-02-18 17:49:52,539 | INFO     | cat /etc/os-release:
[2026-02-18 18:50:23] NAME="CentOS Linux"
[2026-02-18 18:50:23] VERSION="7 (Core)"
[2026-02-18 18:50:23] ID="centos"
[2026-02-18 18:50:23] ID_LIKE="rhel fedora"
[2026-02-18 18:50:23] VERSION_ID="7"
[2026-02-18 18:50:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-18 18:50:23] ANSI_COLOR="0;31"
[2026-02-18 18:50:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-18 18:50:23] HOME_URL="https://www.centos.org/"
[2026-02-18 18:50:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-18 18:50:23] 
[2026-02-18 18:50:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-18 18:50:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-18 18:50:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-18 18:50:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-18 18:50:23] 
[2026-02-18 18:50:23] 2026-02-18 17:49:52,539 | INFO     | **************************************
[2026-02-18 18:50:23] 2026-02-18 17:49:52,654 | WARNING  | process 970229 can no longer be monitored (due to stat problems) - aborting
[2026-02-18 18:50:23] 2026-02-18 17:49:52,682 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-18 18:50:23] 2026-02-18 17:49:52,718 | INFO     | number of running child processes to parent process 970229: 1
[2026-02-18 18:50:23] 2026-02-18 17:49:52,718 | INFO     | maximum number of monitored processes: 6
[2026-02-18 18:50:23] 2026-02-18 17:49:52,718 | INFO     | aborting job monitoring since job object (job id=7018452114) has expired
[2026-02-18 18:50:23] 2026-02-18 17:49:53,042 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-18 18:50:23] 2026-02-18 17:49:53,054 | INFO     | sufficient remaining disk space (371517816832 B)
[2026-02-18 18:50:23] 2026-02-18 17:49:53,055 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-18 18:50:23] 2026-02-18 17:49:53,055 | INFO     | current server update state: UPDATING_FINAL
[2026-02-18 18:50:23] 2026-02-18 17:49:53,055 | INFO     | update_server=False
[2026-02-18 18:50:23] 2026-02-18 17:49:53,055 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-18 18:50:23] 2026-02-18 17:49:53,055 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-18 18:50:23] 2026-02-18 17:49:53,055 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-18 18:50:23] 2026-02-18 17:49:53,055 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-18 18:50:23] 2026-02-18 17:49:53,055 | INFO     | will abort loop
[2026-02-18 18:50:23] 2026-02-18 17:49:53,143 | INFO     | all job control threads have been joined
[2026-02-18 18:50:23] 2026-02-18 17:49:53,252 | INFO     | all data control threads have been joined
[2026-02-18 18:50:23] 2026-02-18 17:49:54,061 | INFO     | [job] retrieve thread has finished
[2026-02-18 18:50:23] 2026-02-18 17:49:54,061 | INFO     | [job] queue monitor thread has finished
[2026-02-18 18:50:23] 2026-02-18 17:49:54,061 | INFO     | [job] job monitor thread has finished
[2026-02-18 18:50:23] 2026-02-18 17:49:54,084 | INFO     | [payload] validate_pre thread has finished
[2026-02-18 18:50:23] 2026-02-18 17:49:54,148 | INFO     | [job] control thread has finished
[2026-02-18 18:50:23] 2026-02-18 17:49:54,177 | INFO     | [data] copytool_in thread has finished
[2026-02-18 18:50:23] 2026-02-18 17:49:54,258 | INFO     | [data] control thread has finished
[2026-02-18 18:50:23] 2026-02-18 17:49:54,371 | INFO     | all payload control threads have been joined
[2026-02-18 18:50:23] 2026-02-18 17:49:54,482 | INFO     | [payload] execute_payloads thread has finished
[2026-02-18 18:50:23] 2026-02-18 17:49:54,614 | INFO     | [payload] failed_post thread has finished
[2026-02-18 18:50:23] 2026-02-18 17:49:55,061 | INFO     | [data] copytool_out thread has finished
[2026-02-18 18:50:23] 2026-02-18 17:49:55,146 | INFO     | [payload] validate_post thread has finished
[2026-02-18 18:50:23] 2026-02-18 17:49:55,377 | INFO     | [payload] control thread has finished
[2026-02-18 18:50:23] 2026-02-18 17:49:55,456 | INFO     | [job] validate thread has finished
[2026-02-18 18:50:23] 2026-02-18 17:49:55,509 | INFO     | [job] create_data_payload thread has finished
[2026-02-18 18:50:23] 2026-02-18 17:49:55,701 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-18 18:50:23] 2026-02-18 17:49:59,707 | INFO     | [data] queue_monitor thread has finished
[2026-02-18 18:50:23] 2026-02-18 17:50:03,308 | INFO     | [monitor] cgroup control has ended
[2026-02-18 18:50:23] 2026-02-18 17:50:03,733 | INFO     | job.realtimelogging is not enabled
[2026-02-18 18:50:23] 2026-02-18 17:50:04,739 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-18 18:50:23] 2026-02-18 17:50:06,282 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140658816091968)>', '<ExcThread(monitor, started 140658459256576)>']
[2026-02-18 18:50:23] 2026-02-18 17:50:11,308 | INFO     | all workflow threads have been joined
[2026-02-18 18:50:23] 2026-02-18 17:50:11,308 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-18 18:50:23] 2026-02-18 17:50:11,308 | INFO     | traces error code: 0
[2026-02-18 18:50:23] 2026-02-18 17:50:11,308 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-18 18:50:23] 2026-02-18 17:50:23,173 | INFO     | PID=965810 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-18 18:50:23] 2026-02-18 17:50:23,173 | INFO     | found 0 job(s) in 20 queues
[2026-02-18 18:50:23] 2026-02-18 17:50:23,173 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-18 18:50:23] 2026-02-18 17:50:23,173 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-18 18:50:23] 2026-02-18 17:50:23,173 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-18 18:50:23] 2026-02-18 17:50:23,173 | INFO     | [monitor] control thread has ended
[2026-02-18 18:50:23] 2026-02-18 17:50:23,219 [wrapper] ==== pilot stdout END ====
[2026-02-18 18:50:23] 2026-02-18 17:50:23,221 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-18 18:50:23] 2026-02-18 17:50:23,224 [wrapper] pilotpid: 965810
[2026-02-18 18:50:23] 2026-02-18 17:50:23,226 [wrapper] Pilot exit status: 0
[2026-02-18 18:50:23] 2026-02-18 17:50:23,233 [wrapper] pandaids: 7018452114
[2026-02-18 18:50:23] 2026-02-18 17:50:23,249 [wrapper] cleanup supervisor_pilot  976039 965811
[2026-02-18 18:50:23] 2026-02-18 17:50:23,251 [wrapper] Test setup, not cleaning
[2026-02-18 18:50:23] 2026-02-18 17:50:23,253 [wrapper] apfmon messages muted
[2026-02-18 18:50:23] 2026-02-18 17:50:23,256 [wrapper] ==== wrapper stdout END ====
[2026-02-18 18:50:23] 2026-02-18 17:50:23,258 [wrapper] ==== wrapper stderr END ====
[2026-02-18 18:50:23]  *** Error codes and diagnostics ***
[2026-02-18 18:50:23]     "exeErrorCode": 0,
[2026-02-18 18:50:23]     "exeErrorDiag": "",
[2026-02-18 18:50:23]     "pilotErrorCode": 0,
[2026-02-18 18:50:23]     "pilotErrorDiag": "",
[2026-02-18 18:50:23]  *** Listing of results directory ***
[2026-02-18 18:50:23] total 955544
[2026-02-18 18:50:23] -rwx------ 1 boinc boinc     36322 Feb 17 18:09 runpilot2-wrapper.sh
[2026-02-18 18:50:23] -rw-r--r-- 1 boinc boinc    584627 Feb 17 18:09 pilot3.tar.gz
[2026-02-18 18:50:23] -rw-r--r-- 1 boinc boinc      5111 Feb 17 18:12 queuedata.json
[2026-02-18 18:50:23] -rw-r--r-- 1 boinc boinc       100 Feb 18 16:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-18 18:50:23] -rwxr-xr-x 1 boinc boinc      7986 Feb 18 16:52 run_atlas
[2026-02-18 18:50:23] -rw-r--r-- 1 boinc boinc       105 Feb 18 16:52 job.xml
[2026-02-18 18:50:23] -rw-r--r-- 2 boinc boinc 688352390 Feb 18 16:52 EVNT.48508760._000403.pool.root.1
[2026-02-18 18:50:23] -rw-r--r-- 2 boinc boinc    597944 Feb 18 16:52 input.tar.gz
[2026-02-18 18:50:23] -rw-r--r-- 2 boinc boinc     15845 Feb 18 16:52 start_atlas.sh
[2026-02-18 18:50:23] drwxrwx--x 2 boinc boinc      4096 Feb 18 16:52 shared
[2026-02-18 18:50:23] -rw-r--r-- 1 boinc boinc         0 Feb 18 16:52 boinc_setup_complete
[2026-02-18 18:50:23] -rw-r--r-- 1 boinc boinc      6448 Feb 18 16:52 init_data.xml
[2026-02-18 18:50:23] -rw-r--r-- 1 boinc boinc         0 Feb 18 16:52 boinc_lockfile
[2026-02-18 18:50:23] -rw-r--r-- 1 boinc boinc      2552 Feb 18 16:52 pandaJob.out
[2026-02-18 18:50:23] -rw------- 1 boinc boinc    999674 Feb 18 16:52 agis_schedconf.cvmfs.json
[2026-02-18 18:50:23] -rw------- 1 boinc boinc   1513015 Feb 18 16:52 agis_ddmendpoints.agis.ALL.json
[2026-02-18 18:50:23] -rw------- 1 boinc boinc       427 Feb 18 16:52 workernode_map.json
[2026-02-18 18:50:23] drwx------ 5 boinc boinc      4096 Feb 18 16:52 pilot3
[2026-02-18 18:50:23] -rw------- 1 boinc boinc        95 Feb 18 18:49 pilot_heartbeat.json
[2026-02-18 18:50:23] -rw------- 1 boinc boinc 283582332 Feb 18 18:49 HITS.48508763._020681.pool.root.1
[2026-02-18 18:50:23] -rw-r--r-- 1 boinc boinc       530 Feb 18 18:49 boinc_task_state.xml
[2026-02-18 18:50:23] -rw------- 1 boinc boinc      1032 Feb 18 18:49 memory_monitor_summary.json
[2026-02-18 18:50:23] -rw------- 1 boinc boinc    307033 Feb 18 18:49 log.48508763._020681.job.log.tgz.1
[2026-02-18 18:50:23] -rw------- 1 boinc boinc      6309 Feb 18 18:49 heartbeat.json
[2026-02-18 18:50:23] -rw-r--r-- 1 boinc boinc        27 Feb 18 18:50 wrapper_checkpoint.txt
[2026-02-18 18:50:23] -rw-r--r-- 1 boinc boinc      8192 Feb 18 18:50 boinc_mmap_file
[2026-02-18 18:50:23] -rw------- 1 boinc boinc       746 Feb 18 18:50 pilotlog.txt
[2026-02-18 18:50:23] -rw------- 1 boinc boinc   1008404 Feb 18 18:50 log.48508763._020681.job.log.1
[2026-02-18 18:50:23] -rw------- 1 boinc boinc       357 Feb 18 18:50 output.list
[2026-02-18 18:50:23] -rw-r--r-- 1 boinc boinc       620 Feb 18 18:50 runtime_log
[2026-02-18 18:50:23] -rw------- 1 boinc boinc   1331200 Feb 18 18:50 result.tar.gz
[2026-02-18 18:50:23] -rw-r--r-- 1 boinc boinc      8916 Feb 18 18:50 runtime_log.err
[2026-02-18 18:50:23] -rw------- 1 boinc boinc       661 Feb 18 18:50 kQOLDmVkdC9n9Rq4apOajLDm4fhM0noT9bVooX4SDmLNtKDm4n7UAo.diag
[2026-02-18 18:50:23] -rw-r--r-- 1 boinc boinc      9610 Feb 18 18:50 stderr.txt
[2026-02-18 18:50:23] HITS file was successfully produced:
[2026-02-18 18:50:23] -rw------- 1 boinc boinc 283582332 Feb 18 18:49 shared/HITS.pool.root.1
[2026-02-18 18:50:23]  *** Contents of shared directory: ***
[2026-02-18 18:50:23] total 951064
[2026-02-18 18:50:23] -rw-r--r-- 2 boinc boinc 688352390 Feb 18 16:52 ATLAS.root_0
[2026-02-18 18:50:23] -rw-r--r-- 2 boinc boinc    597944 Feb 18 16:52 input.tar.gz
[2026-02-18 18:50:23] -rw-r--r-- 2 boinc boinc     15845 Feb 18 16:52 start_atlas.sh
[2026-02-18 18:50:23] -rw------- 1 boinc boinc 283582332 Feb 18 18:49 HITS.pool.root.1
[2026-02-18 18:50:23] -rw------- 1 boinc boinc   1331200 Feb 18 18:50 result.tar.gz
18:50:24 (961772): run_atlas exited; CPU time 20283.688555
18:50:24 (961772): called boinc_finish(0)

</stderr_txt>
]]>

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