Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:46:52 (407014): wrapper (7.7.26015): starting
11:46:52 (407014): wrapper: running run_atlas (--nthreads 4)
[2026-02-18 11:46:52] Arguments: --nthreads 4
[2026-02-18 11:46:52] Threads: 4
[2026-02-18 11:46:52] Checking for CVMFS
[2026-02-18 11:46:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-18 11:46:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-18 11:46:52] Running cvmfs_config stat atlas.cern.ch
[2026-02-18 11:46:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-18 11:46:52] 2.9.2.0 3434 2704 92648 156366 1 50 23793512 36864000 0 130560 0 1124088 99.984 103150 16316 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-18 11:46:52] CVMFS is ok
[2026-02-18 11:46:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-18 11:46:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-18 11:46:52] Further information can be found at the LHC@home message board.
[2026-02-18 11:46:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-18 11:46:52] Checking for apptainer binary...
[2026-02-18 11:46:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-18 11:46:52] Running /usr/bin/apptainer --version
[2026-02-18 11:46:52] apptainer version 1.4.1-1.1
[2026-02-18 11:46:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-18 11:46:52] thA381
[2026-02-18 11:46:52] apptainer works
[2026-02-18 11:46:52] Set ATHENA_PROC_NUMBER=4
[2026-02-18 11:46:52] Set ATHENA_CORE_NUMBER=4
[2026-02-18 11:46:52] Starting ATLAS job with PandaID=7018383451
[2026-02-18 11:46:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-18 13:32:28]  *** The last 200 lines of the pilot log: ***
[2026-02-18 13:32:28] 2026-02-18 12:31:56,447 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-18 13:32:28] 2026-02-18 12:31:56,447 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-18 13:32:28] 2026-02-18 12:31:56,447 | INFO     | job 7018383451 has completed (purged errors)
[2026-02-18 13:32:28] 2026-02-18 12:31:56,447 | INFO     | overall cleanup function is called
[2026-02-18 13:32:28] 2026-02-18 12:31:57,454 | INFO     | --- collectZombieJob: --- 10, [415636]
[2026-02-18 13:32:28] 2026-02-18 12:31:57,455 | INFO     | zombie collector waiting for pid 415636
[2026-02-18 13:32:28] 2026-02-18 12:31:57,455 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-18 13:32:28] 2026-02-18 12:31:57,455 | INFO     | collected zombie processes
[2026-02-18 13:32:28] 2026-02-18 12:31:57,455 | INFO     | will attempt to kill all subprocesses of pid=415636
[2026-02-18 13:32:28] 2026-02-18 12:31:57,497 | INFO     | process IDs to be killed: [415636] (in reverse order)
[2026-02-18 13:32:28] 2026-02-18 12:31:57,530 | WARNING  | found no corresponding commands to process id(s)
[2026-02-18 13:32:28] 2026-02-18 12:31:57,530 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-18 13:32:28] 2026-02-18 12:31:57,532 | INFO     | did not find any defunct processes belonging to 415636
[2026-02-18 13:32:28] 2026-02-18 12:31:57,533 | INFO     | did not find any defunct processes belonging to 415636
[2026-02-18 13:32:28] 2026-02-18 12:31:57,533 | INFO     | ready for new job
[2026-02-18 13:32:28] 2026-02-18 12:31:57,533 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-18 13:32:28] 2026-02-18 12:31:57,534 | INFO     | **************************************
[2026-02-18 13:32:28] 2026-02-18 12:31:57,534 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-18 13:32:28] 2026-02-18 12:31:57,534 | INFO     | **************************************
[2026-02-18 13:32:28] 2026-02-18 12:31:57,534 | INFO     | 
[2026-02-18 13:32:28] 2026-02-18 12:31:57,534 | INFO     | architecture information:
[2026-02-18 13:32:28] 2026-02-18 12:31:57,534 | INFO     | executing command: cat /etc/os-release
[2026-02-18 13:32:28] 2026-02-18 12:31:57,548 | INFO     | cat /etc/os-release:
[2026-02-18 13:32:28] NAME="CentOS Linux"
[2026-02-18 13:32:28] VERSION="7 (Core)"
[2026-02-18 13:32:28] ID="centos"
[2026-02-18 13:32:28] ID_LIKE="rhel fedora"
[2026-02-18 13:32:28] VERSION_ID="7"
[2026-02-18 13:32:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-18 13:32:28] ANSI_COLOR="0;31"
[2026-02-18 13:32:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-18 13:32:28] HOME_URL="https://www.centos.org/"
[2026-02-18 13:32:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-18 13:32:28] 
[2026-02-18 13:32:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-18 13:32:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-18 13:32:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-18 13:32:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-18 13:32:28] 
[2026-02-18 13:32:28] 2026-02-18 12:31:57,548 | INFO     | **************************************
[2026-02-18 13:32:28] 2026-02-18 12:31:58,051 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-18 13:32:28] 2026-02-18 12:31:58,069 | INFO     | sufficient remaining disk space (230475956224 B)
[2026-02-18 13:32:28] 2026-02-18 12:31:58,069 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-18 13:32:28] 2026-02-18 12:31:58,069 | INFO     | current server update state: UPDATING_FINAL
[2026-02-18 13:32:28] 2026-02-18 12:31:58,069 | INFO     | update_server=False
[2026-02-18 13:32:28] 2026-02-18 12:31:58,069 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-18 13:32:28] 2026-02-18 12:31:58,070 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-18 13:32:28] 2026-02-18 12:31:58,070 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-18 13:32:28] 2026-02-18 12:31:58,547 | INFO     | all job control threads have been joined
[2026-02-18 13:32:28] 2026-02-18 12:31:58,618 | INFO     | all data control threads have been joined
[2026-02-18 13:32:28] 2026-02-18 12:31:58,963 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-18 13:32:28] 2026-02-18 12:31:58,963 | INFO     | aborting loop
[2026-02-18 13:32:28] 2026-02-18 12:31:59,075 | INFO     | [job] queue monitor thread has finished
[2026-02-18 13:32:28] 2026-02-18 12:31:59,075 | INFO     | [job] retrieve thread has finished
[2026-02-18 13:32:28] 2026-02-18 12:31:59,422 | INFO     | [payload] validate_post thread has finished
[2026-02-18 13:32:28] 2026-02-18 12:31:59,465 | INFO     | all payload control threads have been joined
[2026-02-18 13:32:28] 2026-02-18 12:31:59,552 | INFO     | [job] control thread has finished
[2026-02-18 13:32:28] 2026-02-18 12:31:59,623 | INFO     | [data] control thread has finished
[2026-02-18 13:32:28] 2026-02-18 12:31:59,947 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-18 13:32:28] 2026-02-18 12:31:59,969 | INFO     | [job] job monitor thread has finished
[2026-02-18 13:32:28] 2026-02-18 12:31:59,997 | INFO     | [job] validate thread has finished
[2026-02-18 13:32:28] 2026-02-18 12:32:00,076 | INFO     | [data] copytool_out thread has finished
[2026-02-18 13:32:28] 2026-02-18 12:32:00,108 | INFO     | [payload] validate_pre thread has finished
[2026-02-18 13:32:28] 2026-02-18 12:32:00,143 | INFO     | [job] create_data_payload thread has finished
[2026-02-18 13:32:28] 2026-02-18 12:32:00,377 | INFO     | [data] copytool_in thread has finished
[2026-02-18 13:32:28] 2026-02-18 12:32:00,389 | INFO     | [payload] execute_payloads thread has finished
[2026-02-18 13:32:28] 2026-02-18 12:32:00,434 | INFO     | [payload] failed_post thread has finished
[2026-02-18 13:32:28] 2026-02-18 12:32:00,452 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-02-18 13:32:28] 2026-02-18 12:32:00,471 | INFO     | [payload] control thread has finished
[2026-02-18 13:32:28] 2026-02-18 12:32:03,953 | INFO     | [data] queue_monitor thread has finished
[2026-02-18 13:32:28] 2026-02-18 12:32:08,170 | INFO     | job.realtimelogging is not enabled
[2026-02-18 13:32:28] 2026-02-18 12:32:09,176 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-18 13:32:28] 2026-02-18 12:32:11,795 | INFO     | [monitor] cgroup control has ended
[2026-02-18 13:32:28] 2026-02-18 12:32:12,025 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140380914067264)>', '<ExcThread(monitor, started 140380108474112)>']
[2026-02-18 13:32:28] 2026-02-18 12:32:17,050 | INFO     | all workflow threads have been joined
[2026-02-18 13:32:28] 2026-02-18 12:32:17,050 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-18 13:32:28] 2026-02-18 12:32:17,050 | INFO     | traces error code: 0
[2026-02-18 13:32:28] 2026-02-18 12:32:17,050 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-18 13:32:28] 2026-02-18 12:32:28,579 | INFO     | PID=411121 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-18 13:32:28] 2026-02-18 12:32:28,579 | INFO     | found 0 job(s) in 20 queues
[2026-02-18 13:32:28] 2026-02-18 12:32:28,579 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-18 13:32:28] 2026-02-18 12:32:28,579 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-18 13:32:28] 2026-02-18 12:32:28,579 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-18 13:32:28] 2026-02-18 12:32:28,579 | INFO     | [monitor] control thread has ended
[2026-02-18 13:32:28] 2026-02-18 12:32:28,654 [wrapper] ==== pilot stdout END ====
[2026-02-18 13:32:28] 2026-02-18 12:32:28,658 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-18 13:32:28] 2026-02-18 12:32:28,662 [wrapper] pilotpid: 411121
[2026-02-18 13:32:28] 2026-02-18 12:32:28,666 [wrapper] Pilot exit status: 0
[2026-02-18 13:32:28] 2026-02-18 12:32:28,677 [wrapper] pandaids: 7018383451
[2026-02-18 13:32:28] 2026-02-18 12:32:28,699 [wrapper] cleanup supervisor_pilot  421586 411122
[2026-02-18 13:32:28] 2026-02-18 12:32:28,703 [wrapper] Test setup, not cleaning
[2026-02-18 13:32:28] 2026-02-18 12:32:28,707 [wrapper] apfmon messages muted
[2026-02-18 13:32:28] 2026-02-18 12:32:28,711 [wrapper] ==== wrapper stdout END ====
[2026-02-18 13:32:28] 2026-02-18 12:32:28,715 [wrapper] ==== wrapper stderr END ====
[2026-02-18 13:32:28]  *** Error codes and diagnostics ***
[2026-02-18 13:32:28]     "exeErrorCode": 0,
[2026-02-18 13:32:28]     "exeErrorDiag": "",
[2026-02-18 13:32:28]     "pilotErrorCode": 0,
[2026-02-18 13:32:28]     "pilotErrorDiag": "",
[2026-02-18 13:32:28]  *** Listing of results directory ***
[2026-02-18 13:32:28] total 942008
[2026-02-18 13:32:28] -rw-r--r-- 1 boinc boinc    584627 Feb 17 14:36 pilot3.tar.gz
[2026-02-18 13:32:28] -rwx------ 1 boinc boinc     36322 Feb 17 14:38 runpilot2-wrapper.sh
[2026-02-18 13:32:28] -rw-r--r-- 1 boinc boinc      5111 Feb 17 14:40 queuedata.json
[2026-02-18 13:32:28] -rw-r--r-- 1 boinc boinc       100 Feb 18 11:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-18 13:32:28] -rwxr-xr-x 1 boinc boinc      7986 Feb 18 11:46 run_atlas
[2026-02-18 13:32:28] -rw-r--r-- 1 boinc boinc       105 Feb 18 11:46 job.xml
[2026-02-18 13:32:28] -rw-r--r-- 2 boinc boinc 680115065 Feb 18 11:46 EVNT.48508760._000390.pool.root.1
[2026-02-18 13:32:28] -rw-r--r-- 2 boinc boinc    597951 Feb 18 11:46 input.tar.gz
[2026-02-18 13:32:28] -rw-r--r-- 2 boinc boinc     15845 Feb 18 11:46 start_atlas.sh
[2026-02-18 13:32:28] drwxrwx--x 2 boinc boinc      4096 Feb 18 11:46 shared
[2026-02-18 13:32:28] -rw-r--r-- 1 boinc boinc         0 Feb 18 11:46 boinc_setup_complete
[2026-02-18 13:32:28] -rw-r--r-- 1 boinc boinc      6376 Feb 18 11:46 init_data.xml
[2026-02-18 13:32:28] -rw-r--r-- 1 boinc boinc         0 Feb 18 11:46 boinc_lockfile
[2026-02-18 13:32:28] -rw-r--r-- 1 boinc boinc      2550 Feb 18 11:46 pandaJob.out
[2026-02-18 13:32:28] -rw------- 1 boinc boinc    999714 Feb 18 11:47 agis_schedconf.cvmfs.json
[2026-02-18 13:32:28] -rw------- 1 boinc boinc   1513015 Feb 18 11:47 agis_ddmendpoints.agis.ALL.json
[2026-02-18 13:32:28] -rw------- 1 boinc boinc       427 Feb 18 11:47 workernode_map.json
[2026-02-18 13:32:28] drwx------ 5 boinc boinc      4096 Feb 18 11:47 pilot3
[2026-02-18 13:32:28] -rw------- 1 boinc boinc 278166603 Feb 18 13:31 HITS.48508763._020023.pool.root.1
[2026-02-18 13:32:28] -rw------- 1 boinc boinc        95 Feb 18 13:31 pilot_heartbeat.json
[2026-02-18 13:32:28] -rw-r--r-- 1 boinc boinc       530 Feb 18 13:31 boinc_task_state.xml
[2026-02-18 13:32:28] -rw------- 1 boinc boinc      1019 Feb 18 13:31 memory_monitor_summary.json
[2026-02-18 13:32:28] -rw------- 1 boinc boinc    299732 Feb 18 13:31 log.48508763._020023.job.log.tgz.1
[2026-02-18 13:32:28] -rw------- 1 boinc boinc      6309 Feb 18 13:31 heartbeat.json
[2026-02-18 13:32:28] -rw-r--r-- 1 boinc boinc        27 Feb 18 13:32 wrapper_checkpoint.txt
[2026-02-18 13:32:28] -rw-r--r-- 1 boinc boinc      8192 Feb 18 13:32 boinc_mmap_file
[2026-02-18 13:32:28] -rw------- 1 boinc boinc       746 Feb 18 13:32 pilotlog.txt
[2026-02-18 13:32:28] -rw------- 1 boinc boinc    908888 Feb 18 13:32 log.48508763._020023.job.log.1
[2026-02-18 13:32:28] -rw------- 1 boinc boinc       357 Feb 18 13:32 output.list
[2026-02-18 13:32:28] -rw-r--r-- 1 boinc boinc       620 Feb 18 13:32 runtime_log
[2026-02-18 13:32:28] -rw------- 1 boinc boinc   1228800 Feb 18 13:32 result.tar.gz
[2026-02-18 13:32:28] -rw-r--r-- 1 boinc boinc      8896 Feb 18 13:32 runtime_log.err
[2026-02-18 13:32:28] -rw------- 1 boinc boinc       657 Feb 18 13:32 XWmMDmRSaC9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmCHuKDmeMDIvm.diag
[2026-02-18 13:32:28] -rw-r--r-- 1 boinc boinc     11194 Feb 18 13:32 stderr.txt
[2026-02-18 13:32:28] HITS file was successfully produced:
[2026-02-18 13:32:28] -rw------- 1 boinc boinc 278166603 Feb 18 13:31 shared/HITS.pool.root.1
[2026-02-18 13:32:28]  *** Contents of shared directory: ***
[2026-02-18 13:32:28] total 937632
[2026-02-18 13:32:28] -rw-r--r-- 2 boinc boinc 680115065 Feb 18 11:46 ATLAS.root_0
[2026-02-18 13:32:28] -rw-r--r-- 2 boinc boinc    597951 Feb 18 11:46 input.tar.gz
[2026-02-18 13:32:28] -rw-r--r-- 2 boinc boinc     15845 Feb 18 11:46 start_atlas.sh
[2026-02-18 13:32:28] -rw------- 1 boinc boinc 278166603 Feb 18 13:31 HITS.pool.root.1
[2026-02-18 13:32:28] -rw------- 1 boinc boinc   1228800 Feb 18 13:32 result.tar.gz
13:32:30 (407014): run_atlas exited; CPU time 23942.702823
13:32:30 (407014): called boinc_finish(0)

</stderr_txt>
]]>

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