Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:24:15 (401573): wrapper (7.7.26015): starting
11:24:15 (401573): wrapper: running run_atlas (--nthreads 3)
[2026-02-18 11:24:15] Arguments: --nthreads 3
[2026-02-18 11:24:15] Threads: 3
[2026-02-18 11:24:15] Checking for CVMFS
[2026-02-18 11:24:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-18 11:24:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-18 11:24:16] Running cvmfs_config stat atlas.cern.ch
[2026-02-18 11:24:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-18 11:24:16] 2.9.2.0 4025606 4974 72800 156366 3 49 21183334 36864000 0 130560 0 1584875 99.981 160677 19758 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-18 11:24:16] CVMFS is ok
[2026-02-18 11:24:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-18 11:24:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-18 11:24:16] Further information can be found at the LHC@home message board.
[2026-02-18 11:24:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-18 11:24:16] Checking for apptainer binary...
[2026-02-18 11:24:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-18 11:24:16] Running /usr/bin/apptainer --version
[2026-02-18 11:24:16] apptainer version 1.4.1-1.1
[2026-02-18 11:24:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-18 11:24:16] atlasA221b
[2026-02-18 11:24:16] apptainer works
[2026-02-18 11:24:16] Set ATHENA_PROC_NUMBER=3
[2026-02-18 11:24:16] Set ATHENA_CORE_NUMBER=3
[2026-02-18 11:24:16] Starting ATLAS job with PandaID=7018375909
[2026-02-18 11:24:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-18 13:42:48]  *** The last 200 lines of the pilot log: ***
[2026-02-18 13:42:48] 2026-02-18 12:41:57,705 | INFO     | all job control threads have been joined
[2026-02-18 13:42:48] 2026-02-18 12:41:57,767 | INFO     | [job] queue monitor thread has finished
[2026-02-18 13:42:48] 2026-02-18 12:41:57,768 | INFO     | [job] retrieve thread has finished
[2026-02-18 13:42:48] 2026-02-18 12:41:57,808 | INFO     | [payload] control thread has finished
[2026-02-18 13:42:48] 2026-02-18 12:41:58,077 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-18 13:42:48] 2026-02-18 12:41:58,248 | INFO     | [data] control thread has finished
[2026-02-18 13:42:48] 2026-02-18 12:41:58,321 | INFO     | [job] validate thread has finished
[2026-02-18 13:42:48] 2026-02-18 12:41:58,349 | INFO     | [job] job monitor thread has finished
[2026-02-18 13:42:48] 2026-02-18 12:41:58,376 | INFO     | [job] create_data_payload thread has finished
[2026-02-18 13:42:48] 2026-02-18 12:41:58,460 | INFO     | [payload] validate_pre thread has finished
[2026-02-18 13:42:48] 2026-02-18 12:41:58,465 | INFO     | [payload] execute_payloads thread has finished
[2026-02-18 13:42:48] 2026-02-18 12:41:58,480 | INFO     | [data] copytool_in thread has finished
[2026-02-18 13:42:48] 2026-02-18 12:41:58,498 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-18 13:42:48] 2026-02-18 12:41:58,503 | INFO     | [payload] failed_post thread has finished
[2026-02-18 13:42:48] 2026-02-18 12:41:58,710 | INFO     | [job] control thread has finished
[2026-02-18 13:42:48] 2026-02-18 12:41:59,102 | INFO     | [payload] validate_post thread has finished
[2026-02-18 13:42:48] 2026-02-18 12:42:00,084 | INFO     | [data] copytool_out thread has finished
[2026-02-18 13:42:48] 2026-02-18 12:42:02,505 | INFO     | [data] queue_monitor thread has finished
[2026-02-18 13:42:48] 2026-02-18 12:42:07,700 | INFO     | job.realtimelogging is not enabled
[2026-02-18 13:42:48] 2026-02-18 12:42:08,705 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-18 13:42:48] 2026-02-18 12:42:26,548 | INFO     | PID=405616 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-18 13:42:48] 2026-02-18 12:42:26,548 | INFO     | found 0 job(s) in 20 queues
[2026-02-18 13:42:48] 2026-02-18 12:42:26,548 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-18 13:42:48] 2026-02-18 12:42:26,548 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-18 13:42:48] 2026-02-18 12:42:41,364 | INFO     | [monitor] cgroup control has ended
[2026-02-18 13:42:48] 2026-02-18 12:42:43,229 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140109050668864)>', '<ExcThread(monitor, started 140108695049984)>']
[2026-02-18 13:42:48] 2026-02-18 12:42:43,638 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-18 13:42:48] 2026-02-18 12:42:43,638 | INFO     | [monitor] control thread has ended
[2026-02-18 13:42:48] 2026-02-18 12:42:48,255 | INFO     | all workflow threads have been joined
[2026-02-18 13:42:48] 2026-02-18 12:42:48,255 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-18 13:42:48] 2026-02-18 12:42:48,256 | INFO     | traces error code: 0
[2026-02-18 13:42:48] 2026-02-18 12:42:48,256 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-18 13:42:48] 2026-02-18 12:42:48,306 [wrapper] ==== pilot stdout END ====
[2026-02-18 13:42:48] 2026-02-18 12:42:48,309 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-18 13:42:48] 2026-02-18 12:42:48,312 [wrapper] pilotpid: 405616
[2026-02-18 13:42:48] 2026-02-18 12:42:48,315 [wrapper] Pilot exit status: 0
[2026-02-18 13:42:48] 2026-02-18 12:42:48,323 [wrapper] pandaids: 7018375909
[2026-02-18 13:42:48] 2026-02-18 12:42:48,343 [wrapper] cleanup supervisor_pilot  416517 405617
[2026-02-18 13:42:48] 2026-02-18 12:42:48,346 [wrapper] Test setup, not cleaning
[2026-02-18 13:42:48] 2026-02-18 12:42:48,349 [wrapper] apfmon messages muted
[2026-02-18 13:42:48] 2026-02-18 12:42:48,351 [wrapper] ==== wrapper stdout END ====
[2026-02-18 13:42:48] 2026-02-18 12:42:48,354 [wrapper] ==== wrapper stderr END ====
[2026-02-18 13:42:48]  *** Error codes and diagnostics ***
[2026-02-18 13:42:48]     "exeErrorCode": 0,
[2026-02-18 13:42:48]     "exeErrorDiag": "",
[2026-02-18 13:42:48]     "pilotErrorCode": 0,
[2026-02-18 13:42:48]     "pilotErrorDiag": "",
[2026-02-18 13:42:48]  *** Listing of results directory ***
[2026-02-18 13:42:48] total 940956
[2026-02-18 13:42:48] -rw-r--r-- 1 boinc boinc    584627 Feb 17 14:36 pilot3.tar.gz
[2026-02-18 13:42:48] -rwx------ 1 boinc boinc     36322 Feb 17 14:40 runpilot2-wrapper.sh
[2026-02-18 13:42:48] -rw-r--r-- 1 boinc boinc      5111 Feb 17 14:43 queuedata.json
[2026-02-18 13:42:48] -rw-r--r-- 1 boinc boinc       100 Feb 18 11:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-18 13:42:48] -rwxr-xr-x 1 boinc boinc      7986 Feb 18 11:24 run_atlas
[2026-02-18 13:42:48] -rw-r--r-- 1 boinc boinc       105 Feb 18 11:24 job.xml
[2026-02-18 13:42:48] -rw-r--r-- 2 boinc boinc 682907964 Feb 18 11:24 EVNT.48508760._000379.pool.root.1
[2026-02-18 13:42:48] -rw-r--r-- 2 boinc boinc    597964 Feb 18 11:24 input.tar.gz
[2026-02-18 13:42:48] -rw-r--r-- 2 boinc boinc     15845 Feb 18 11:24 start_atlas.sh
[2026-02-18 13:42:48] drwxrwx--x 2 boinc boinc      4096 Feb 18 11:24 shared
[2026-02-18 13:42:48] -rw-r--r-- 1 boinc boinc         0 Feb 18 11:24 boinc_setup_complete
[2026-02-18 13:42:48] -rw-r--r-- 1 boinc boinc      6199 Feb 18 11:24 init_data.xml
[2026-02-18 13:42:48] -rw-r--r-- 1 boinc boinc         0 Feb 18 11:24 boinc_lockfile
[2026-02-18 13:42:48] -rw-r--r-- 1 boinc boinc      2551 Feb 18 11:24 pandaJob.out
[2026-02-18 13:42:48] -rw------- 1 boinc boinc    999714 Feb 18 11:24 agis_schedconf.cvmfs.json
[2026-02-18 13:42:48] -rw------- 1 boinc boinc   1513015 Feb 18 11:24 agis_ddmendpoints.agis.ALL.json
[2026-02-18 13:42:48] -rw------- 1 boinc boinc       423 Feb 18 11:24 workernode_map.json
[2026-02-18 13:42:48] drwx------ 5 boinc boinc      4096 Feb 18 11:24 pilot3
[2026-02-18 13:42:48] -rw------- 1 boinc boinc 273780044 Feb 18 13:41 HITS.48508763._019455.pool.root.1
[2026-02-18 13:42:48] -rw-r--r-- 1 boinc boinc       530 Feb 18 13:41 boinc_task_state.xml
[2026-02-18 13:42:48] -rw------- 1 boinc boinc      1029 Feb 18 13:41 memory_monitor_summary.json
[2026-02-18 13:42:48] -rw------- 1 boinc boinc    292661 Feb 18 13:41 log.48508763._019455.job.log.tgz.1
[2026-02-18 13:42:48] -rw------- 1 boinc boinc      6317 Feb 18 13:41 heartbeat.json
[2026-02-18 13:42:48] -rw------- 1 boinc boinc        95 Feb 18 13:42 pilot_heartbeat.json
[2026-02-18 13:42:48] -rw-r--r-- 1 boinc boinc      8192 Feb 18 13:42 boinc_mmap_file
[2026-02-18 13:42:48] -rw-r--r-- 1 boinc boinc        27 Feb 18 13:42 wrapper_checkpoint.txt
[2026-02-18 13:42:48] -rw------- 1 boinc boinc      4819 Feb 18 13:42 pilotlog.txt
[2026-02-18 13:42:48] -rw------- 1 boinc boinc   1175283 Feb 18 13:42 log.48508763._019455.job.log.1
[2026-02-18 13:42:48] -rw------- 1 boinc boinc       357 Feb 18 13:42 output.list
[2026-02-18 13:42:48] -rw-r--r-- 1 boinc boinc       620 Feb 18 13:42 runtime_log
[2026-02-18 13:42:48] -rw------- 1 boinc boinc   1484800 Feb 18 13:42 result.tar.gz
[2026-02-18 13:42:48] -rw-r--r-- 1 boinc boinc      8916 Feb 18 13:42 runtime_log.err
[2026-02-18 13:42:48] -rw------- 1 boinc boinc       661 Feb 18 13:42 ThdKDmDUaC9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmSMuKDm1UCaEo.diag
[2026-02-18 13:42:48] -rw-r--r-- 1 boinc boinc      6756 Feb 18 13:42 stderr.txt
[2026-02-18 13:42:48] HITS file was successfully produced:
[2026-02-18 13:42:48] -rw------- 1 boinc boinc 273780044 Feb 18 13:41 shared/HITS.pool.root.1
[2026-02-18 13:42:48]  *** Contents of shared directory: ***
[2026-02-18 13:42:48] total 936328
[2026-02-18 13:42:48] -rw-r--r-- 2 boinc boinc 682907964 Feb 18 11:24 ATLAS.root_0
[2026-02-18 13:42:48] -rw-r--r-- 2 boinc boinc    597964 Feb 18 11:24 input.tar.gz
[2026-02-18 13:42:48] -rw-r--r-- 2 boinc boinc     15845 Feb 18 11:24 start_atlas.sh
[2026-02-18 13:42:48] -rw------- 1 boinc boinc 273780044 Feb 18 13:41 HITS.pool.root.1
[2026-02-18 13:42:48] -rw------- 1 boinc boinc   1484800 Feb 18 13:42 result.tar.gz
13:42:49 (401573): run_atlas exited; CPU time 23978.296344
13:42:49 (401573): called boinc_finish(0)

</stderr_txt>
]]>

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