Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:29:24 (1727646): wrapper (7.7.26015): starting
21:29:24 (1727646): wrapper: running run_atlas (--nthreads 4)
[2026-02-18 21:29:24] Arguments: --nthreads 4
[2026-02-18 21:29:24] Threads: 4
[2026-02-18 21:29:24] Checking for CVMFS
[2026-02-18 21:29:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-18 21:29:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-18 21:29:24] Running cvmfs_config stat atlas.cern.ch
[2026-02-18 21:29:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-18 21:29:24] 2.9.2.0 872034 5663 100860 156381 1 50 26555918 36864000 0 130560 0 2406424 99.986 188226 16657 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-18 21:29:24] CVMFS is ok
[2026-02-18 21:29:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-18 21:29:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-18 21:29:24] Further information can be found at the LHC@home message board.
[2026-02-18 21:29:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-18 21:29:24] Checking for apptainer binary...
[2026-02-18 21:29:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-18 21:29:24] Running /usr/bin/apptainer --version
[2026-02-18 21:29:24] apptainer version 1.4.1-1.1
[2026-02-18 21:29:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-18 21:29:24] thA334
[2026-02-18 21:29:24] apptainer works
[2026-02-18 21:29:24] Set ATHENA_PROC_NUMBER=4
[2026-02-18 21:29:24] Set ATHENA_CORE_NUMBER=4
[2026-02-18 21:29:24] Starting ATLAS job with PandaID=7018726161
[2026-02-18 21:29:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-18 23:11:49]  *** The last 200 lines of the pilot log: ***
[2026-02-18 23:11:49] 2026-02-18 22:11:11,712 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-18 23:11:49] 2026-02-18 22:11:11,712 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-18 23:11:49] 2026-02-18 22:11:11,712 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-18 23:11:49] 2026-02-18 22:11:11,712 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-18 23:11:49] 2026-02-18 22:11:11,712 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-18 23:11:49] 2026-02-18 22:11:11,712 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-18 23:11:49] 2026-02-18 22:11:11,712 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-18 23:11:49] 2026-02-18 22:11:11,712 | INFO     | job 7018726161 has completed (purged errors)
[2026-02-18 23:11:49] 2026-02-18 22:11:11,712 | INFO     | overall cleanup function is called
[2026-02-18 23:11:49] 2026-02-18 22:11:12,719 | INFO     | --- collectZombieJob: --- 10, [1736285]
[2026-02-18 23:11:49] 2026-02-18 22:11:12,719 | INFO     | zombie collector waiting for pid 1736285
[2026-02-18 23:11:49] 2026-02-18 22:11:12,719 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-18 23:11:49] 2026-02-18 22:11:12,719 | INFO     | collected zombie processes
[2026-02-18 23:11:49] 2026-02-18 22:11:12,719 | INFO     | will attempt to kill all subprocesses of pid=1736285
[2026-02-18 23:11:49] 2026-02-18 22:11:12,761 | INFO     | process IDs to be killed: [1736285] (in reverse order)
[2026-02-18 23:11:49] 2026-02-18 22:11:12,791 | WARNING  | found no corresponding commands to process id(s)
[2026-02-18 23:11:49] 2026-02-18 22:11:12,792 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-18 23:11:49] 2026-02-18 22:11:12,793 | INFO     | did not find any defunct processes belonging to 1736285
[2026-02-18 23:11:49] 2026-02-18 22:11:12,794 | INFO     | did not find any defunct processes belonging to 1736285
[2026-02-18 23:11:49] 2026-02-18 22:11:12,794 | INFO     | ready for new job
[2026-02-18 23:11:49] 2026-02-18 22:11:12,794 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-18 23:11:49] 2026-02-18 22:11:12,795 | INFO     | **************************************
[2026-02-18 23:11:49] 2026-02-18 22:11:12,795 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-18 23:11:49] 2026-02-18 22:11:12,795 | INFO     | **************************************
[2026-02-18 23:11:49] 2026-02-18 22:11:12,795 | INFO     | 
[2026-02-18 23:11:49] 2026-02-18 22:11:12,796 | INFO     | architecture information:
[2026-02-18 23:11:49] 2026-02-18 22:11:12,796 | INFO     | executing command: cat /etc/os-release
[2026-02-18 23:11:49] 2026-02-18 22:11:12,808 | INFO     | cat /etc/os-release:
[2026-02-18 23:11:49] NAME="CentOS Linux"
[2026-02-18 23:11:49] VERSION="7 (Core)"
[2026-02-18 23:11:49] ID="centos"
[2026-02-18 23:11:49] ID_LIKE="rhel fedora"
[2026-02-18 23:11:49] VERSION_ID="7"
[2026-02-18 23:11:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-18 23:11:49] ANSI_COLOR="0;31"
[2026-02-18 23:11:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-18 23:11:49] HOME_URL="https://www.centos.org/"
[2026-02-18 23:11:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-18 23:11:49] 
[2026-02-18 23:11:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-18 23:11:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-18 23:11:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-18 23:11:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-18 23:11:49] 
[2026-02-18 23:11:49] 2026-02-18 22:11:12,809 | INFO     | **************************************
[2026-02-18 23:11:49] 2026-02-18 22:11:13,312 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-18 23:11:49] 2026-02-18 22:11:13,324 | INFO     | sufficient remaining disk space (227677306880 B)
[2026-02-18 23:11:49] 2026-02-18 22:11:13,325 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-18 23:11:49] 2026-02-18 22:11:13,325 | INFO     | current server update state: UPDATING_FINAL
[2026-02-18 23:11:49] 2026-02-18 22:11:13,325 | INFO     | update_server=False
[2026-02-18 23:11:49] 2026-02-18 22:11:13,325 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-18 23:11:49] 2026-02-18 22:11:13,325 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-18 23:11:49] 2026-02-18 22:11:13,325 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-18 23:11:49] 2026-02-18 22:11:13,325 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-18 23:11:49] 2026-02-18 22:11:13,480 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-18 23:11:49] 2026-02-18 22:11:13,480 | INFO     | aborting loop
[2026-02-18 23:11:49] 2026-02-18 22:11:13,724 | INFO     | all data control threads have been joined
[2026-02-18 23:11:49] 2026-02-18 22:11:14,331 | INFO     | [job] retrieve thread has finished
[2026-02-18 23:11:49] 2026-02-18 22:11:14,331 | INFO     | [job] queue monitor thread has finished
[2026-02-18 23:11:49] 2026-02-18 22:11:14,406 | INFO     | [payload] validate_pre thread has finished
[2026-02-18 23:11:49] 2026-02-18 22:11:14,486 | INFO     | [job] job monitor thread has finished
[2026-02-18 23:11:49] 2026-02-18 22:11:14,492 | INFO     | all payload control threads have been joined
[2026-02-18 23:11:49] 2026-02-18 22:11:14,568 | INFO     | [data] copytool_in thread has finished
[2026-02-18 23:11:49] 2026-02-18 22:11:14,730 | INFO     | [data] control thread has finished
[2026-02-18 23:11:49] 2026-02-18 22:11:14,737 | INFO     | all job control threads have been joined
[2026-02-18 23:11:49] 2026-02-18 22:11:14,973 | INFO     | [payload] execute_payloads thread has finished
[2026-02-18 23:11:49] 2026-02-18 22:11:15,228 | INFO     | job.realtimelogging is not enabled
[2026-02-18 23:11:49] 2026-02-18 22:11:15,305 | INFO     | [payload] validate_post thread has finished
[2026-02-18 23:11:49] 2026-02-18 22:11:15,331 | INFO     | [data] copytool_out thread has finished
[2026-02-18 23:11:49] 2026-02-18 22:11:15,498 | INFO     | [payload] control thread has finished
[2026-02-18 23:11:49] 2026-02-18 22:11:15,566 | INFO     | [job] validate thread has finished
[2026-02-18 23:11:49] 2026-02-18 22:11:15,660 | INFO     | [job] create_data_payload thread has finished
[2026-02-18 23:11:49] 2026-02-18 22:11:15,742 | INFO     | [job] control thread has finished
[2026-02-18 23:11:49] 2026-02-18 22:11:15,774 | INFO     | [payload] failed_post thread has finished
[2026-02-18 23:11:49] 2026-02-18 22:11:16,234 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-18 23:11:49] 2026-02-18 22:11:17,332 | INFO     | [data] queue_monitor thread has finished
[2026-02-18 23:11:49] 2026-02-18 22:11:43,702 | INFO     | PID=1731761 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-18 23:11:49] 2026-02-18 22:11:43,702 | INFO     | found 0 job(s) in 20 queues
[2026-02-18 23:11:49] 2026-02-18 22:11:43,702 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-18 23:11:49] 2026-02-18 22:11:43,702 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-18 23:11:49] 2026-02-18 22:11:43,931 | INFO     | [monitor] cgroup control has ended
[2026-02-18 23:11:49] 2026-02-18 22:11:44,688 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139845315381056)>', '<ExcThread(monitor, started 139844378412800)>']
[2026-02-18 23:11:49] 2026-02-18 22:11:44,708 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-18 23:11:49] 2026-02-18 22:11:44,708 | INFO     | [monitor] control thread has ended
[2026-02-18 23:11:49] 2026-02-18 22:11:49,713 | INFO     | all workflow threads have been joined
[2026-02-18 23:11:49] 2026-02-18 22:11:49,714 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-18 23:11:49] 2026-02-18 22:11:49,714 | INFO     | traces error code: 0
[2026-02-18 23:11:49] 2026-02-18 22:11:49,715 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-18 23:11:49] 2026-02-18 22:11:49,819 [wrapper] ==== pilot stdout END ====
[2026-02-18 23:11:49] 2026-02-18 22:11:49,823 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-18 23:11:49] 2026-02-18 22:11:49,826 [wrapper] pilotpid: 1731761
[2026-02-18 23:11:49] 2026-02-18 22:11:49,830 [wrapper] Pilot exit status: 0
[2026-02-18 23:11:49] 2026-02-18 22:11:49,840 [wrapper] pandaids: 7018726161
[2026-02-18 23:11:49] 2026-02-18 22:11:49,863 [wrapper] cleanup supervisor_pilot 1741615 1731762
[2026-02-18 23:11:49] 2026-02-18 22:11:49,866 [wrapper] Test setup, not cleaning
[2026-02-18 23:11:49] 2026-02-18 22:11:49,870 [wrapper] apfmon messages muted
[2026-02-18 23:11:49] 2026-02-18 22:11:49,873 [wrapper] ==== wrapper stdout END ====
[2026-02-18 23:11:49] 2026-02-18 22:11:49,876 [wrapper] ==== wrapper stderr END ====
[2026-02-18 23:11:49]  *** Error codes and diagnostics ***
[2026-02-18 23:11:49]     "exeErrorCode": 0,
[2026-02-18 23:11:49]     "exeErrorDiag": "",
[2026-02-18 23:11:49]     "pilotErrorCode": 0,
[2026-02-18 23:11:49]     "pilotErrorDiag": "",
[2026-02-18 23:11:49]  *** Listing of results directory ***
[2026-02-18 23:11:49] total 941368
[2026-02-18 23:11:49] -rwx------ 1 boinc boinc     36322 Feb 17 21:44 runpilot2-wrapper.sh
[2026-02-18 23:11:49] -rw-r--r-- 1 boinc boinc    584627 Feb 17 21:47 pilot3.tar.gz
[2026-02-18 23:11:49] -rw-r--r-- 1 boinc boinc      5111 Feb 17 21:48 queuedata.json
[2026-02-18 23:11:49] -rw-r--r-- 1 boinc boinc       100 Feb 18 21:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-18 23:11:49] -rwxr-xr-x 1 boinc boinc      7986 Feb 18 21:29 run_atlas
[2026-02-18 23:11:49] -rw-r--r-- 1 boinc boinc       105 Feb 18 21:29 job.xml
[2026-02-18 23:11:49] -rw-r--r-- 2 boinc boinc 677725397 Feb 18 21:29 EVNT.48508760._000458.pool.root.1
[2026-02-18 23:11:49] -rw-r--r-- 2 boinc boinc    597950 Feb 18 21:29 input.tar.gz
[2026-02-18 23:11:49] -rw-r--r-- 2 boinc boinc     15845 Feb 18 21:29 start_atlas.sh
[2026-02-18 23:11:49] drwxrwx--x 2 boinc boinc      4096 Feb 18 21:29 shared
[2026-02-18 23:11:49] -rw-r--r-- 1 boinc boinc         0 Feb 18 21:29 boinc_setup_complete
[2026-02-18 23:11:49] -rw-r--r-- 1 boinc boinc      6369 Feb 18 21:29 init_data.xml
[2026-02-18 23:11:49] -rw-r--r-- 1 boinc boinc         0 Feb 18 21:29 boinc_lockfile
[2026-02-18 23:11:49] -rw-r--r-- 1 boinc boinc      2550 Feb 18 21:29 pandaJob.out
[2026-02-18 23:11:49] -rw------- 1 boinc boinc   1001034 Feb 18 21:29 agis_schedconf.cvmfs.json
[2026-02-18 23:11:49] -rw------- 1 boinc boinc   1513015 Feb 18 21:29 agis_ddmendpoints.agis.ALL.json
[2026-02-18 23:11:49] -rw------- 1 boinc boinc       420 Feb 18 21:29 workernode_map.json
[2026-02-18 23:11:49] drwx------ 5 boinc boinc      4096 Feb 18 21:29 pilot3
[2026-02-18 23:11:49] -rw------- 1 boinc boinc 279971248 Feb 18 23:10 HITS.48508763._023436.pool.root.1
[2026-02-18 23:11:49] -rw-r--r-- 1 boinc boinc       530 Feb 18 23:10 boinc_task_state.xml
[2026-02-18 23:11:49] -rw------- 1 boinc boinc        95 Feb 18 23:11 pilot_heartbeat.json
[2026-02-18 23:11:49] -rw------- 1 boinc boinc      1020 Feb 18 23:11 memory_monitor_summary.json
[2026-02-18 23:11:49] -rw------- 1 boinc boinc    289332 Feb 18 23:11 log.48508763._023436.job.log.tgz.1
[2026-02-18 23:11:49] -rw------- 1 boinc boinc      6304 Feb 18 23:11 heartbeat.json
[2026-02-18 23:11:49] -rw-r--r-- 1 boinc boinc      8192 Feb 18 23:11 boinc_mmap_file
[2026-02-18 23:11:49] -rw-r--r-- 1 boinc boinc        27 Feb 18 23:11 wrapper_checkpoint.txt
[2026-02-18 23:11:49] -rw------- 1 boinc boinc      4820 Feb 18 23:11 pilotlog.txt
[2026-02-18 23:11:49] -rw------- 1 boinc boinc    883962 Feb 18 23:11 log.48508763._023436.job.log.1
[2026-02-18 23:11:49] -rw------- 1 boinc boinc       357 Feb 18 23:11 output.list
[2026-02-18 23:11:49] -rw-r--r-- 1 boinc boinc       620 Feb 18 23:11 runtime_log
[2026-02-18 23:11:49] -rw------- 1 boinc boinc   1187840 Feb 18 23:11 result.tar.gz
[2026-02-18 23:11:49] -rw-r--r-- 1 boinc boinc      8896 Feb 18 23:11 runtime_log.err
[2026-02-18 23:11:49] -rw------- 1 boinc boinc       657 Feb 18 23:11 8wULDms6gC9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmLquKDmsuLqem.diag
[2026-02-18 23:11:49] -rw-r--r-- 1 boinc boinc     11612 Feb 18 23:11 stderr.txt
[2026-02-18 23:11:49] HITS file was successfully produced:
[2026-02-18 23:11:49] -rw------- 1 boinc boinc 279971248 Feb 18 23:10 shared/HITS.pool.root.1
[2026-02-18 23:11:49]  *** Contents of shared directory: ***
[2026-02-18 23:11:49] total 937024
[2026-02-18 23:11:49] -rw-r--r-- 2 boinc boinc 677725397 Feb 18 21:29 ATLAS.root_0
[2026-02-18 23:11:49] -rw-r--r-- 2 boinc boinc    597950 Feb 18 21:29 input.tar.gz
[2026-02-18 23:11:49] -rw-r--r-- 2 boinc boinc     15845 Feb 18 21:29 start_atlas.sh
[2026-02-18 23:11:49] -rw------- 1 boinc boinc 279971248 Feb 18 23:10 HITS.pool.root.1
[2026-02-18 23:11:49] -rw------- 1 boinc boinc   1187840 Feb 18 23:11 result.tar.gz
23:11:51 (1727646): run_atlas exited; CPU time 23251.588054
23:11:51 (1727646): called boinc_finish(0)

</stderr_txt>
]]>

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