Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:53:52 (903585): wrapper (7.7.26015): starting
08:53:52 (903585): wrapper: running run_atlas (--nthreads 3)
[2026-02-18 08:53:52] Arguments: --nthreads 3
[2026-02-18 08:53:52] Threads: 3
[2026-02-18 08:53:52] Checking for CVMFS
[2026-02-18 08:53:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-18 08:53:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-18 08:53:52] Running cvmfs_config stat atlas.cern.ch
[2026-02-18 08:53:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-18 08:53:52] 2.9.2.0 241658 4870 83348 156361 3 49 28576002 36864000 0 130560 0 1892150 99.985 159282 14138 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-18 08:53:52] CVMFS is ok
[2026-02-18 08:53:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-18 08:53:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-18 08:53:52] Further information can be found at the LHC@home message board.
[2026-02-18 08:53:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-18 08:53:52] Checking for apptainer binary...
[2026-02-18 08:53:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-18 08:53:52] Running /usr/bin/apptainer --version
[2026-02-18 08:53:52] apptainer version 1.4.1-1.1
[2026-02-18 08:53:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-18 08:53:53] magicA161a
[2026-02-18 08:53:53] apptainer works
[2026-02-18 08:53:53] Set ATHENA_PROC_NUMBER=3
[2026-02-18 08:53:53] Set ATHENA_CORE_NUMBER=3
[2026-02-18 08:53:53] Starting ATLAS job with PandaID=7018207151
[2026-02-18 08:53:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-18 10:53:34]  *** The last 200 lines of the pilot log: ***
[2026-02-18 10:53:34] 2026-02-18 09:53:02,918 | INFO     | --- collectZombieJob: --- 10, [912047]
[2026-02-18 10:53:34] 2026-02-18 09:53:02,918 | INFO     | zombie collector waiting for pid 912047
[2026-02-18 10:53:34] 2026-02-18 09:53:02,918 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-18 10:53:34] 2026-02-18 09:53:02,918 | INFO     | collected zombie processes
[2026-02-18 10:53:34] 2026-02-18 09:53:02,918 | INFO     | will attempt to kill all subprocesses of pid=912047
[2026-02-18 10:53:34] 2026-02-18 09:53:02,958 | INFO     | process IDs to be killed: [912047] (in reverse order)
[2026-02-18 10:53:34] 2026-02-18 09:53:02,982 | WARNING  | found no corresponding commands to process id(s)
[2026-02-18 10:53:34] 2026-02-18 09:53:02,983 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-18 10:53:34] 2026-02-18 09:53:02,984 | INFO     | did not find any defunct processes belonging to 912047
[2026-02-18 10:53:34] 2026-02-18 09:53:02,985 | INFO     | did not find any defunct processes belonging to 912047
[2026-02-18 10:53:34] 2026-02-18 09:53:02,985 | INFO     | ready for new job
[2026-02-18 10:53:34] 2026-02-18 09:53:02,985 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-18 10:53:34] 2026-02-18 09:53:02,986 | INFO     | **************************************
[2026-02-18 10:53:34] 2026-02-18 09:53:02,986 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-18 10:53:34] 2026-02-18 09:53:02,986 | INFO     | **************************************
[2026-02-18 10:53:34] 2026-02-18 09:53:02,986 | INFO     | 
[2026-02-18 10:53:34] 2026-02-18 09:53:02,987 | INFO     | architecture information:
[2026-02-18 10:53:34] 2026-02-18 09:53:02,987 | INFO     | executing command: cat /etc/os-release
[2026-02-18 10:53:34] 2026-02-18 09:53:02,995 | INFO     | cat /etc/os-release:
[2026-02-18 10:53:34] NAME="CentOS Linux"
[2026-02-18 10:53:34] VERSION="7 (Core)"
[2026-02-18 10:53:34] ID="centos"
[2026-02-18 10:53:34] ID_LIKE="rhel fedora"
[2026-02-18 10:53:34] VERSION_ID="7"
[2026-02-18 10:53:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-18 10:53:34] ANSI_COLOR="0;31"
[2026-02-18 10:53:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-18 10:53:34] HOME_URL="https://www.centos.org/"
[2026-02-18 10:53:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-18 10:53:34] 
[2026-02-18 10:53:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-18 10:53:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-18 10:53:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-18 10:53:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-18 10:53:34] 
[2026-02-18 10:53:34] 2026-02-18 09:53:02,995 | INFO     | **************************************
[2026-02-18 10:53:34] 2026-02-18 09:53:03,498 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-18 10:53:34] 2026-02-18 09:53:03,511 | INFO     | sufficient remaining disk space (371593314304 B)
[2026-02-18 10:53:34] 2026-02-18 09:53:03,511 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-18 10:53:34] 2026-02-18 09:53:03,511 | INFO     | current server update state: UPDATING_FINAL
[2026-02-18 10:53:34] 2026-02-18 09:53:03,511 | INFO     | update_server=False
[2026-02-18 10:53:34] 2026-02-18 09:53:03,511 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-18 10:53:34] 2026-02-18 09:53:03,512 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-18 10:53:34] 2026-02-18 09:53:03,512 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-18 10:53:34] 2026-02-18 09:53:03,545 | INFO     | all data control threads have been joined
[2026-02-18 10:53:34] 2026-02-18 09:53:03,892 | INFO     | job.realtimelogging is not enabled
[2026-02-18 10:53:34] 2026-02-18 09:53:04,249 | INFO     | all job control threads have been joined
[2026-02-18 10:53:34] 2026-02-18 09:53:04,314 | INFO     | all payload control threads have been joined
[2026-02-18 10:53:34] 2026-02-18 09:53:04,449 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-18 10:53:34] 2026-02-18 09:53:04,450 | INFO     | aborting loop
[2026-02-18 10:53:34] 2026-02-18 09:53:04,477 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-18 10:53:34] 2026-02-18 09:53:04,512 | INFO     | [job] retrieve thread has finished
[2026-02-18 10:53:34] 2026-02-18 09:53:04,517 | INFO     | [job] queue monitor thread has finished
[2026-02-18 10:53:34] 2026-02-18 09:53:04,550 | INFO     | [data] control thread has finished
[2026-02-18 10:53:34] 2026-02-18 09:53:04,635 | INFO     | [payload] validate_post thread has finished
[2026-02-18 10:53:34] 2026-02-18 09:53:04,737 | INFO     | [payload] failed_post thread has finished
[2026-02-18 10:53:34] 2026-02-18 09:53:04,898 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-18 10:53:34] 2026-02-18 09:53:05,255 | INFO     | [job] control thread has finished
[2026-02-18 10:53:34] 2026-02-18 09:53:05,320 | INFO     | [payload] control thread has finished
[2026-02-18 10:53:34] 2026-02-18 09:53:05,327 | INFO     | [job] validate thread has finished
[2026-02-18 10:53:34] 2026-02-18 09:53:05,410 | INFO     | [job] create_data_payload thread has finished
[2026-02-18 10:53:34] 2026-02-18 09:53:05,450 | INFO     | [job] job monitor thread has finished
[2026-02-18 10:53:34] 2026-02-18 09:53:05,468 | INFO     | [payload] validate_pre thread has finished
[2026-02-18 10:53:34] 2026-02-18 09:53:05,555 | INFO     | [data] copytool_in thread has finished
[2026-02-18 10:53:34] 2026-02-18 09:53:05,910 | INFO     | [payload] execute_payloads thread has finished
[2026-02-18 10:53:34] 2026-02-18 09:53:06,483 | INFO     | [data] copytool_out thread has finished
[2026-02-18 10:53:34] 2026-02-18 09:53:07,518 | INFO     | [data] queue_monitor thread has finished
[2026-02-18 10:53:34] 2026-02-18 09:53:10,238 | INFO     | [monitor] cgroup control has ended
[2026-02-18 10:53:34] 2026-02-18 09:53:11,656 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139847477393216)>', '<ExcThread(monitor, started 139846987265792)>']
[2026-02-18 10:53:34] 2026-02-18 09:53:16,682 | INFO     | all workflow threads have been joined
[2026-02-18 10:53:34] 2026-02-18 09:53:16,682 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-18 10:53:34] 2026-02-18 09:53:16,682 | INFO     | traces error code: 0
[2026-02-18 10:53:34] 2026-02-18 09:53:16,682 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-18 10:53:34] 2026-02-18 09:53:34,447 | INFO     | PID=907620 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-18 10:53:34] 2026-02-18 09:53:34,448 | INFO     | found 0 job(s) in 20 queues
[2026-02-18 10:53:34] 2026-02-18 09:53:34,448 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-18 10:53:34] 2026-02-18 09:53:34,448 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-18 10:53:34] 2026-02-18 09:53:34,448 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-18 10:53:34] 2026-02-18 09:53:34,448 | INFO     | [monitor] control thread has ended
[2026-02-18 10:53:34] 2026-02-18 09:53:34,494 [wrapper] ==== pilot stdout END ====
[2026-02-18 10:53:34] 2026-02-18 09:53:34,496 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-18 10:53:34] 2026-02-18 09:53:34,498 [wrapper] pilotpid: 907620
[2026-02-18 10:53:34] 2026-02-18 09:53:34,501 [wrapper] Pilot exit status: 0
[2026-02-18 10:53:34] 2026-02-18 09:53:34,508 [wrapper] pandaids: 7018207151
[2026-02-18 10:53:34] 2026-02-18 09:53:34,523 [wrapper] cleanup supervisor_pilot  917380 907621
[2026-02-18 10:53:34] 2026-02-18 09:53:34,525 [wrapper] Test setup, not cleaning
[2026-02-18 10:53:34] 2026-02-18 09:53:34,528 [wrapper] apfmon messages muted
[2026-02-18 10:53:34] 2026-02-18 09:53:34,530 [wrapper] ==== wrapper stdout END ====
[2026-02-18 10:53:34] 2026-02-18 09:53:34,532 [wrapper] ==== wrapper stderr END ====
[2026-02-18 10:53:34]  *** Error codes and diagnostics ***
[2026-02-18 10:53:34]     "exeErrorCode": 0,
[2026-02-18 10:53:34]     "exeErrorDiag": "",
[2026-02-18 10:53:34]     "pilotErrorCode": 0,
[2026-02-18 10:53:34]     "pilotErrorDiag": "",
[2026-02-18 10:53:34]  *** Listing of results directory ***
[2026-02-18 10:53:34] total 946056
[2026-02-18 10:53:34] -rw-r--r-- 1 boinc boinc    584627 Feb 17 12:16 pilot3.tar.gz
[2026-02-18 10:53:34] -rwx------ 1 boinc boinc     36322 Feb 17 12:19 runpilot2-wrapper.sh
[2026-02-18 10:53:34] -rw-r--r-- 1 boinc boinc      5111 Feb 17 12:23 queuedata.json
[2026-02-18 10:53:34] -rw-r--r-- 1 boinc boinc       100 Feb 18 08:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-18 10:53:34] -rwxr-xr-x 1 boinc boinc      7986 Feb 18 08:53 run_atlas
[2026-02-18 10:53:34] -rw-r--r-- 1 boinc boinc       105 Feb 18 08:53 job.xml
[2026-02-18 10:53:34] -rw-r--r-- 2 boinc boinc 676189509 Feb 18 08:53 EVNT.48508760._000344.pool.root.1
[2026-02-18 10:53:34] -rw-r--r-- 2 boinc boinc    597962 Feb 18 08:53 input.tar.gz
[2026-02-18 10:53:34] -rw-r--r-- 2 boinc boinc     15845 Feb 18 08:53 start_atlas.sh
[2026-02-18 10:53:34] drwxrwx--x 2 boinc boinc      4096 Feb 18 08:53 shared
[2026-02-18 10:53:34] -rw-r--r-- 1 boinc boinc         0 Feb 18 08:53 boinc_setup_complete
[2026-02-18 10:53:34] -rw-r--r-- 1 boinc boinc      6448 Feb 18 08:53 init_data.xml
[2026-02-18 10:53:34] -rw-r--r-- 1 boinc boinc         0 Feb 18 08:53 boinc_lockfile
[2026-02-18 10:53:34] -rw-r--r-- 1 boinc boinc      2552 Feb 18 08:53 pandaJob.out
[2026-02-18 10:53:34] -rw------- 1 boinc boinc    999372 Feb 18 08:53 agis_schedconf.cvmfs.json
[2026-02-18 10:53:34] -rw------- 1 boinc boinc   1513015 Feb 18 08:53 agis_ddmendpoints.agis.ALL.json
[2026-02-18 10:53:34] -rw------- 1 boinc boinc       427 Feb 18 08:54 workernode_map.json
[2026-02-18 10:53:34] drwx------ 5 boinc boinc      4096 Feb 18 08:54 pilot3
[2026-02-18 10:53:34] -rw------- 1 boinc boinc 285973342 Feb 18 10:52 HITS.48508763._017717.pool.root.1
[2026-02-18 10:53:34] -rw-r--r-- 1 boinc boinc       530 Feb 18 10:52 boinc_task_state.xml
[2026-02-18 10:53:34] -rw------- 1 boinc boinc      1017 Feb 18 10:52 memory_monitor_summary.json
[2026-02-18 10:53:34] -rw------- 1 boinc boinc    315018 Feb 18 10:53 log.48508763._017717.job.log.tgz.1
[2026-02-18 10:53:34] -rw------- 1 boinc boinc      6313 Feb 18 10:53 heartbeat.json
[2026-02-18 10:53:34] -rw-r--r-- 1 boinc boinc      8192 Feb 18 10:53 boinc_mmap_file
[2026-02-18 10:53:34] -rw-r--r-- 1 boinc boinc        27 Feb 18 10:53 wrapper_checkpoint.txt
[2026-02-18 10:53:34] -rw------- 1 boinc boinc       746 Feb 18 10:53 pilotlog.txt
[2026-02-18 10:53:34] -rw------- 1 boinc boinc        95 Feb 18 10:53 pilot_heartbeat.json
[2026-02-18 10:53:34] -rw------- 1 boinc boinc   1024158 Feb 18 10:53 log.48508763._017717.job.log.1
[2026-02-18 10:53:34] -rw------- 1 boinc boinc       357 Feb 18 10:53 output.list
[2026-02-18 10:53:34] -rw-r--r-- 1 boinc boinc       620 Feb 18 10:53 runtime_log
[2026-02-18 10:53:34] -rw------- 1 boinc boinc   1361920 Feb 18 10:53 result.tar.gz
[2026-02-18 10:53:34] -rw-r--r-- 1 boinc boinc      8916 Feb 18 10:53 runtime_log.err
[2026-02-18 10:53:34] -rw------- 1 boinc boinc       661 Feb 18 10:53 qUlLDmNIYC9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmn7tKDmJFVZom.diag
[2026-02-18 10:53:34] -rw-r--r-- 1 boinc boinc     10698 Feb 18 10:53 stderr.txt
[2026-02-18 10:53:34] HITS file was successfully produced:
[2026-02-18 10:53:34] -rw------- 1 boinc boinc 285973342 Feb 18 10:52 shared/HITS.pool.root.1
[2026-02-18 10:53:34]  *** Contents of shared directory: ***
[2026-02-18 10:53:34] total 941556
[2026-02-18 10:53:34] -rw-r--r-- 2 boinc boinc 676189509 Feb 18 08:53 ATLAS.root_0
[2026-02-18 10:53:34] -rw-r--r-- 2 boinc boinc    597962 Feb 18 08:53 input.tar.gz
[2026-02-18 10:53:34] -rw-r--r-- 2 boinc boinc     15845 Feb 18 08:53 start_atlas.sh
[2026-02-18 10:53:34] -rw------- 1 boinc boinc 285973342 Feb 18 10:52 HITS.pool.root.1
[2026-02-18 10:53:34] -rw------- 1 boinc boinc   1361920 Feb 18 10:53 result.tar.gz
10:53:36 (903585): run_atlas exited; CPU time 20640.482646
10:53:36 (903585): called boinc_finish(0)

</stderr_txt>
]]>

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