Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
12:10:13 (1945493): wrapper (7.7.26015): starting
12:10:13 (1945493): wrapper: running run_atlas (--nthreads 4)
[2026-02-19 12:10:13] Arguments: --nthreads 4
[2026-02-19 12:10:13] Threads: 4
[2026-02-19 12:10:13] Checking for CVMFS
[2026-02-19 12:10:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-19 12:10:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-19 12:10:13] Running cvmfs_config stat atlas.cern.ch
[2026-02-19 12:10:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-19 12:10:14] 2.13.3.0 11582 5005 46824 156405 2 50 28062963 33554432 0 130560 0 2576941 99.987 192179 219 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-02-19 12:10:14] CVMFS is ok
[2026-02-19 12:10:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-19 12:10:14] Checking for apptainer binary...
[2026-02-19 12:10:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-19 12:10:14] Running /usr/bin/apptainer --version
[2026-02-19 12:10:14] apptainer version 1.4.5
[2026-02-19 12:10:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-19 12:10:14] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-02-19 12:10:14] apptainer works
[2026-02-19 12:10:14] Set ATHENA_PROC_NUMBER=4
[2026-02-19 12:10:14] Set ATHENA_CORE_NUMBER=4
[2026-02-19 12:10:14] Starting ATLAS job with PandaID=7018296905
[2026-02-19 12:10:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-19 13:35:33]  *** The last 200 lines of the pilot log: ***
[2026-02-19 13:35:33]  filetype=log
[2026-02-19 13:35:33]  guid=6ea89f78-9055-4730-8e17-33957d64a8de
[2026-02-19 13:35:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-19 13:35:33]  is_altstaged=None
[2026-02-19 13:35:33]  is_tar=False
[2026-02-19 13:35:33]  lfn=log.48508763._019247.job.log.tgz.1
[2026-02-19 13:35:33]  mtime=0
[2026-02-19 13:35:33]  protocol_id=None
[2026-02-19 13:35:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-19 13:35:33]  replicas=None
[2026-02-19 13:35:33]  scope=mc23_13p6TeV
[2026-02-19 13:35:33]  status=None
[2026-02-19 13:35:33]  status_code=0
[2026-02-19 13:35:33]  storage_token=
[2026-02-19 13:35:33]  surl=/home/ek/BOINC/slots/0/PanDA_Pilot-7018296905/log.48508763._019247.job.log.tgz.1
[2026-02-19 13:35:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/52/log.48508763._019247.job.log.tgz.1
[2026-02-19 13:35:33]  workdir=None
[2026-02-19 13:35:33] ]
[2026-02-19 13:35:33] 2026-02-19 11:34:44,943 | INFO     | transferring file log.48508763._019247.job.log.tgz.1 from /home/ek/BOINC/slots/0/PanDA_Pilot-7018296905/log.48508763._019247.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-02-19 13:35:33] 2026-02-19 11:34:44,943 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/0/PanDA_Pilot-7018296905/log.48508763._019247.job.log.tgz.1 /home/ek/BOINC/slots/0/log.48508763._019247.job
[2026-02-19 13:35:33] 2026-02-19 11:34:44,952 | INFO     | adding to output.list: log.48508763._019247.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/52/log.48508763._019247.job.log.tg
[2026-02-19 13:35:33] 2026-02-19 11:34:44,952 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-19 13:35:33] 2026-02-19 11:34:44,952 | INFO     | summary of transferred files:
[2026-02-19 13:35:33] 2026-02-19 11:34:44,952 | INFO     |  -- lfn=log.48508763._019247.job.log.tgz.1, status_code=0, status=transferred
[2026-02-19 13:35:33] 2026-02-19 11:34:44,952 | INFO     | stage-out finished correctly
[2026-02-19 13:35:33] 2026-02-19 11:34:44,978 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-19 13:35:33] 2026-02-19 11:34:45,312 | INFO     | job 7018296905 has state=finished
[2026-02-19 13:35:33] 2026-02-19 11:34:45,313 | INFO     | preparing for final server update for job 7018296905 in state='finished'
[2026-02-19 13:35:33] 2026-02-19 11:34:45,313 | INFO     | reading metadata from: /home/ek/BOINC/slots/0/PanDA_Pilot-7018296905/jobReport.json
[2026-02-19 13:35:33] 2026-02-19 11:34:45,314 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/0/workernode_map.json
[2026-02-19 13:35:33] 2026-02-19 11:34:45,314 | INFO     | this job has now completed (state=finished)
[2026-02-19 13:35:33] 2026-02-19 11:34:45,314 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-19 13:35:33] 2026-02-19 11:34:45,314 | INFO     | log transfer has been attempted: DONE
[2026-02-19 13:35:33] 2026-02-19 11:34:45,314 | INFO     | job 7018296905 has finished - writing final server update
[2026-02-19 13:35:33] 2026-02-19 11:34:45,314 | INFO     | total number of processed events: 400 (read)
[2026-02-19 13:35:33] 2026-02-19 11:34:45,316 | INFO     | using path: /home/ek/BOINC/slots/0/PanDA_Pilot-7018296905/memory_monitor_summary.json (trf name=prmon)
[2026-02-19 13:35:33] 2026-02-19 11:34:45,316 | INFO     | extracted standard info from prmon json
[2026-02-19 13:35:33] 2026-02-19 11:34:45,316 | INFO     | extracted standard memory fields from prmon json
[2026-02-19 13:35:33] 2026-02-19 11:34:45,316 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-19 13:35:33] 2026-02-19 11:34:45,316 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-19 13:35:33] 2026-02-19 11:34:45,316 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-19 13:35:33] 2026-02-19 11:34:45,317 | INFO     | fitting pss+swap vs Time
[2026-02-19 13:35:33] 2026-02-19 11:34:45,317 | INFO     | sum of square deviations: 136095575.0
[2026-02-19 13:35:33] 2026-02-19 11:34:45,317 | INFO     | sum of deviations: 107088885.49999993
[2026-02-19 13:35:33] 2026-02-19 11:34:45,317 | INFO     | mean x: 1771498429.5
[2026-02-19 13:35:33] 2026-02-19 11:34:45,317 | INFO     | mean y: 2431870.5657894737
[2026-02-19 13:35:33] 2026-02-19 11:34:45,317 | INFO     | intersect: -1391498773.2494497
[2026-02-19 13:35:33] 2026-02-19 11:34:45,317 | INFO     | chi2: 0.027861200224603564
[2026-02-19 13:35:33] 2026-02-19 11:34:45,317 | INFO     | current memory leak: 0.79 B/s (using 76 data points, chi2=0.03)
[2026-02-19 13:35:33] 2026-02-19 11:34:45,317 | INFO     | could have reported an average CPU frequency of 2949 MHz (6 samples)
[2026-02-19 13:35:33] 2026-02-19 11:34:45,318 | INFO     | ..............................
[2026-02-19 13:35:33] 2026-02-19 11:34:45,318 | INFO     | . Timing measurements:
[2026-02-19 13:35:33] 2026-02-19 11:34:45,318 | INFO     | . get job = 0 s
[2026-02-19 13:35:33] 2026-02-19 11:34:45,318 | INFO     | . initial setup = 3 s
[2026-02-19 13:35:33] 2026-02-19 11:34:45,318 | INFO     | . payload setup = 2 s
[2026-02-19 13:35:33] 2026-02-19 11:34:45,318 | INFO     | . stage-in = 0 s
[2026-02-19 13:35:33] 2026-02-19 11:34:45,318 | INFO     | . payload execution = 5045 s
[2026-02-19 13:35:33] 2026-02-19 11:34:45,318 | INFO     | . stage-out = 0 s
[2026-02-19 13:35:33] 2026-02-19 11:34:45,318 | INFO     | . log creation = 0 s
[2026-02-19 13:35:33] 2026-02-19 11:34:45,318 | INFO     | ..............................
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | 
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | job summary report
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | --------------------------------------------------
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | PanDA job id: 7018296905
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | task id: 48508763
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | errors: (none)
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | pilot state: finished 
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | transexitcode: 0
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | exeerrorcode: 0
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | exeerrordiag: 
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | exitcode: 0
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | exitmsg: OK
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | cpuconsumptiontime: 19482 s
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | nevents: 400
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | neventsw: 0
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | pid: 1953932
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | pgrp: 1953932
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | corecount: 4
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | event service: False
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | sizes: {0: 2281997, 1: 2282259, 11: 2282287, 5051: 2308726, 5053: 2317918}
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | --------------------------------------------------
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | 
[2026-02-19 13:35:33] 2026-02-19 11:34:45,682 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/0
[2026-02-19 13:35:33] 2026-02-19 11:34:45,691 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-19 13:35:33] 2026-02-19 11:34:45,692 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-19 13:35:33] 2026-02-19 11:34:45,692 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-19 13:35:33] 2026-02-19 11:34:45,692 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-19 13:35:33] 2026-02-19 11:34:45,692 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-19 13:35:33] 2026-02-19 11:34:45,692 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-19 13:35:33] 2026-02-19 11:34:45,692 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-19 13:35:33] 2026-02-19 11:34:45,692 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-19 13:35:33] 2026-02-19 11:34:45,692 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-19 13:35:33] 2026-02-19 11:34:45,692 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-19 13:35:33] 2026-02-19 11:34:45,692 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-19 13:35:33] 2026-02-19 11:34:45,692 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-19 13:35:33] 2026-02-19 11:34:45,692 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-19 13:35:33] 2026-02-19 11:34:45,692 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-19 13:35:33] 2026-02-19 11:34:45,692 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-19 13:35:33] 2026-02-19 11:34:45,692 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-19 13:35:33] 2026-02-19 11:34:45,692 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-19 13:35:33] 2026-02-19 11:34:45,692 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-19 13:35:33] 2026-02-19 11:34:45,692 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-19 13:35:33] 2026-02-19 11:34:45,692 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-19 13:35:33] 2026-02-19 11:34:45,692 | INFO     | job 7018296905 has completed (purged errors)
[2026-02-19 13:35:33] 2026-02-19 11:34:45,692 | INFO     | overall cleanup function is called
[2026-02-19 13:35:33] 2026-02-19 11:34:46,698 | INFO     | --- collectZombieJob: --- 10, [1953932]
[2026-02-19 13:35:33] 2026-02-19 11:34:46,698 | INFO     | zombie collector waiting for pid 1953932
[2026-02-19 13:35:33] 2026-02-19 11:34:46,698 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-19 13:35:33] 2026-02-19 11:34:46,698 | INFO     | collected zombie processes
[2026-02-19 13:35:33] 2026-02-19 11:34:46,698 | INFO     | will attempt to kill all subprocesses of pid=1953932
[2026-02-19 13:35:33] 2026-02-19 11:34:46,786 | INFO     | process IDs to be killed: [1953932] (in reverse order)
[2026-02-19 13:35:33] 2026-02-19 11:34:46,815 | WARNING  | found no corresponding commands to process id(s)
[2026-02-19 13:35:33] 2026-02-19 11:34:46,815 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-19 13:35:33] 2026-02-19 11:34:46,817 | INFO     | did not find any defunct processes belonging to 1953932
[2026-02-19 13:35:33] 2026-02-19 11:34:46,819 | INFO     | did not find any defunct processes belonging to 1953932
[2026-02-19 13:35:33] 2026-02-19 11:34:46,820 | INFO     | ready for new job
[2026-02-19 13:35:33] 2026-02-19 11:34:46,820 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-19 13:35:33] 2026-02-19 11:34:46,820 | INFO     | **************************************
[2026-02-19 13:35:33] 2026-02-19 11:34:46,820 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-19 13:35:33] 2026-02-19 11:34:46,820 | INFO     | **************************************
[2026-02-19 13:35:33] 2026-02-19 11:34:46,820 | INFO     | 
[2026-02-19 13:35:33] 2026-02-19 11:34:46,821 | INFO     | architecture information:
[2026-02-19 13:35:33] 2026-02-19 11:34:46,821 | INFO     | executing command: cat /etc/os-release
[2026-02-19 13:35:33] 2026-02-19 11:34:46,827 | INFO     | cat /etc/os-release:
[2026-02-19 13:35:33] NAME="CentOS Linux"
[2026-02-19 13:35:33] VERSION="7 (Core)"
[2026-02-19 13:35:33] ID="centos"
[2026-02-19 13:35:33] ID_LIKE="rhel fedora"
[2026-02-19 13:35:33] VERSION_ID="7"
[2026-02-19 13:35:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-19 13:35:33] ANSI_COLOR="0;31"
[2026-02-19 13:35:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-19 13:35:33] HOME_URL="https://www.centos.org/"
[2026-02-19 13:35:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-19 13:35:33] 
[2026-02-19 13:35:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-19 13:35:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-19 13:35:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-19 13:35:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-19 13:35:33] 
[2026-02-19 13:35:33] 2026-02-19 11:34:46,827 | INFO     | **************************************
[2026-02-19 13:35:33] 2026-02-19 11:34:47,330 | INFO     | executing command: df -mP /home/ek/BOINC/slots/0
[2026-02-19 13:35:33] 2026-02-19 11:34:47,337 | INFO     | sufficient remaining disk space (53364129792 B)
[2026-02-19 13:35:33] 2026-02-19 11:34:47,337 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-19 13:35:33] 2026-02-19 11:34:47,337 | INFO     | current server update state: UPDATING_FINAL
[2026-02-19 13:35:33] 2026-02-19 11:34:47,337 | INFO     | update_server=False
[2026-02-19 13:35:33] 2026-02-19 11:34:47,337 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-19 13:35:33] 2026-02-19 11:34:47,338 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-19 13:35:33] 2026-02-19 11:34:47,338 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-19 13:35:33] 2026-02-19 11:34:47,903 | INFO     | all job control threads have been joined
[2026-02-19 13:35:33] 2026-02-19 11:34:47,981 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-19 13:35:33] 2026-02-19 11:34:48,118 | INFO     | all data control threads have been joined
[2026-02-19 13:35:33] 2026-02-19 11:34:48,343 | INFO     | [job] queue monitor thread has finished
[2026-02-19 13:35:33] 2026-02-19 11:34:48,343 | INFO     | [job] retrieve thread has finished
[2026-02-19 13:35:33] 2026-02-19 11:34:48,374 | INFO     | [job] validate thread has finished
[2026-02-19 13:35:33] 2026-02-19 11:34:48,425 | INFO     | [payload] failed_post thread has finished
[2026-02-19 13:35:33] 2026-02-19 11:34:48,437 | INFO     | all payload control threads have been joined
[2026-02-19 13:35:33] 2026-02-19 11:34:48,534 | INFO     | [data] copytool_in thread has finished
[2026-02-19 13:35:33] 2026-02-19 11:34:48,543 | WARNING  | process 1953932 can no longer be monitored (due to stat problems) - aborting
[2026-02-19 13:35:33] 2026-02-19 11:34:48,594 | INFO     | using path: /home/ek/BOINC/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-19 13:35:33] 2026-02-19 11:34:48,673 | INFO     | number of running child processes to parent process 1953932: 1
[2026-02-19 13:35:33] 2026-02-19 11:34:48,673 | INFO     | maximum number of monitored processes: 6
[2026-02-19 13:35:33] 2026-02-19 11:34:48,673 | INFO     | aborting job monitoring since job object (job id=7018296905) has expired
[2026-02-19 13:35:33] 2026-02-19 11:34:48,673 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-19 13:35:33] 2026-02-19 11:34:48,673 | INFO     | will abort loop
[2026-02-19 13:35:33] 2026-02-19 11:34:48,703 | INFO     | [payload] validate_pre thread has finished
[2026-02-19 13:35:33] 2026-02-19 11:34:48,849 | INFO     | [payload] execute_payloads thread has finished
[2026-02-19 13:35:33] 2026-02-19 11:34:48,908 | INFO     | [job] control thread has finished
[2026-02-19 13:35:33] 2026-02-19 11:34:49,121 | INFO     | [data] control thread has finished
[2026-02-19 13:35:33] 2026-02-19 11:34:49,184 | INFO     | [payload] validate_post thread has finished
[2026-02-19 13:35:33] 2026-02-19 11:34:49,442 | INFO     | [payload] control thread has finished
[2026-02-19 13:35:33] 2026-02-19 11:34:49,677 | INFO     | [job] job monitor thread has finished
[2026-02-19 13:35:33] 2026-02-19 11:34:49,781 | INFO     | [job] create_data_payload thread has finished
[2026-02-19 13:35:33] 2026-02-19 11:34:49,986 | INFO     | [data] copytool_out thread has finished
[2026-02-19 13:35:33] 2026-02-19 11:34:51,343 | INFO     | [data] queue_monitor thread has finished
[2026-02-19 13:35:33] 2026-02-19 11:34:57,509 | INFO     | job.realtimelogging is not enabled
[2026-02-19 13:35:33] 2026-02-19 11:34:58,514 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-19 13:35:33] 2026-02-19 11:35:17,093 | INFO     | PID=1949324 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-19 13:35:33] 2026-02-19 11:35:17,093 | INFO     | found 0 job(s) in 20 queues
[2026-02-19 13:35:33] 2026-02-19 11:35:17,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-19 13:35:33] 2026-02-19 11:35:17,093 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-19 13:35:33] 2026-02-19 11:35:27,344 | INFO     | [monitor] cgroup control has ended
[2026-02-19 13:35:33] 2026-02-19 11:35:27,898 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139814382401344)>', '<ExcThread(monitor, started 139814020028160)>']
[2026-02-19 13:35:33] 2026-02-19 11:35:28,140 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-19 13:35:33] 2026-02-19 11:35:28,140 | INFO     | [monitor] control thread has ended
[2026-02-19 13:35:33] 2026-02-19 11:35:32,917 | INFO     | all workflow threads have been joined
[2026-02-19 13:35:33] 2026-02-19 11:35:32,918 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-19 13:35:33] 2026-02-19 11:35:32,918 | INFO     | traces error code: 0
[2026-02-19 13:35:33] 2026-02-19 11:35:32,918 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-19 13:35:33] 2026-02-19 11:35:32,958 [wrapper] ==== pilot stdout END ====
[2026-02-19 13:35:33] 2026-02-19 11:35:32,959 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-19 13:35:33] 2026-02-19 11:35:32,961 [wrapper] pilotpid: 1949324
[2026-02-19 13:35:33] 2026-02-19 11:35:32,962 [wrapper] Pilot exit status: 0
[2026-02-19 13:35:33] 2026-02-19 11:35:32,967 [wrapper] pandaids: 7018296905
[2026-02-19 13:35:33] 2026-02-19 11:35:32,987 [wrapper] cleanup supervisor_pilot 2008427 1949325
[2026-02-19 13:35:33] 2026-02-19 11:35:32,989 [wrapper] Test setup, not cleaning
[2026-02-19 13:35:33] 2026-02-19 11:35:32,990 [wrapper] apfmon messages muted
[2026-02-19 13:35:33] 2026-02-19 11:35:32,992 [wrapper] ==== wrapper stdout END ====
[2026-02-19 13:35:33] 2026-02-19 11:35:32,993 [wrapper] ==== wrapper stderr END ====
[2026-02-19 13:35:33]  *** Error codes and diagnostics ***
[2026-02-19 13:35:33]     "exeErrorCode": 0,
[2026-02-19 13:35:33]     "exeErrorDiag": "",
[2026-02-19 13:35:33]     "pilotErrorCode": 0,
[2026-02-19 13:35:33]     "pilotErrorDiag": "",
[2026-02-19 13:35:33]  *** Listing of results directory ***
[2026-02-19 13:35:33] total 953080
[2026-02-19 13:35:33] -rwx------ 1 ek ek     36322 Feb 17 15:40 runpilot2-wrapper.sh
[2026-02-19 13:35:33] -rw-r--r-- 1 ek ek      5111 Feb 17 15:43 queuedata.json
[2026-02-19 13:35:33] -rw-r--r-- 1 ek ek    584627 Feb 17 15:43 pilot3.tar.gz
[2026-02-19 13:35:33] -rw-rw-r-- 1 ek ek       100 Feb 19 12:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-19 13:35:33] -rwxr-xr-x 1 ek ek      7986 Feb 19 12:10 run_atlas
[2026-02-19 13:35:33] -rw-rw-r-- 1 ek ek       105 Feb 19 12:10 job.xml
[2026-02-19 13:35:33] -rw-r--r-- 2 ek ek 680544900 Feb 19 12:10 EVNT.48508760._000375.pool.root.1
[2026-02-19 13:35:33] -rw-r--r-- 2 ek ek    597958 Feb 19 12:10 input.tar.gz
[2026-02-19 13:35:33] -rw-r--r-- 2 ek ek     15845 Feb 19 12:10 start_atlas.sh
[2026-02-19 13:35:33] drwxrwx--x 2 ek ek      4096 Feb 19 12:10 shared
[2026-02-19 13:35:33] -rw-rw-r-- 1 ek ek         0 Feb 19 12:10 boinc_setup_complete
[2026-02-19 13:35:33] -rw-rw-r-- 1 ek ek      9842 Feb 19 12:10 init_data.xml
[2026-02-19 13:35:33] -rw-rw-r-- 1 ek ek         0 Feb 19 12:10 boinc_lockfile
[2026-02-19 13:35:33] -rw-rw-r-- 1 ek ek      2551 Feb 19 12:10 pandaJob.out
[2026-02-19 13:35:33] -rw------- 1 ek ek        50 Feb 19 12:10 setup.sh.local
[2026-02-19 13:35:33] -rw------- 1 ek ek   1001083 Feb 19 12:10 agis_schedconf.cvmfs.json
[2026-02-19 13:35:33] -rw------- 1 ek ek   1513015 Feb 19 12:10 agis_ddmendpoints.agis.ALL.json
[2026-02-19 13:35:33] -rw------- 1 ek ek       433 Feb 19 12:10 workernode_map.json
[2026-02-19 13:35:33] drwx------ 5 ek ek      4096 Feb 19 12:10 pilot3
[2026-02-19 13:35:33] -rw------- 1 ek ek 289453716 Feb 19 13:34 HITS.48508763._019247.pool.root.1
[2026-02-19 13:35:33] -rw------- 1 ek ek      1031 Feb 19 13:34 memory_monitor_summary.json
[2026-02-19 13:35:33] -rw-rw-r-- 1 ek ek       530 Feb 19 13:34 boinc_task_state.xml
[2026-02-19 13:35:33] -rw------- 1 ek ek    268786 Feb 19 13:34 log.48508763._019247.job.log.tgz.1
[2026-02-19 13:35:33] -rw------- 1 ek ek      6311 Feb 19 13:34 heartbeat.json
[2026-02-19 13:35:33] -rw-rw-r-- 1 ek ek      8192 Feb 19 13:35 boinc_mmap_file
[2026-02-19 13:35:33] -rw-rw-r-- 1 ek ek        27 Feb 19 13:35 wrapper_checkpoint.txt
[2026-02-19 13:35:33] -rw------- 1 ek ek        95 Feb 19 13:35 pilot_heartbeat.json
[2026-02-19 13:35:33] -rw------- 1 ek ek      5337 Feb 19 13:35 pilotlog.txt
[2026-02-19 13:35:33] -rw------- 1 ek ek    737967 Feb 19 13:35 log.48508763._019247.job.log.1
[2026-02-19 13:35:33] -rw------- 1 ek ek       357 Feb 19 13:35 output.list
[2026-02-19 13:35:33] -rw-rw-r-- 1 ek ek       620 Feb 19 13:35 runtime_log
[2026-02-19 13:35:33] -rw------- 1 ek ek   1024000 Feb 19 13:35 result.tar.gz
[2026-02-19 13:35:33] -rw-rw-r-- 1 ek ek      9501 Feb 19 13:35 runtime_log.err
[2026-02-19 13:35:33] -rw------- 1 ek ek       661 Feb 19 13:35 ohPODmAUaC9n9Rq4apOajLDm4fhM0noT9bVooX4SDmp9sKDmviFOQo.diag
[2026-02-19 13:35:33] -rw-rw-r-- 1 ek ek     21118 Feb 19 13:35 stderr.txt
[2026-02-19 13:35:33] HITS file was successfully produced:
[2026-02-19 13:35:33] -rw------- 1 ek ek 289453716 Feb 19 13:34 shared/HITS.pool.root.1
[2026-02-19 13:35:33]  *** Contents of shared directory: ***
[2026-02-19 13:35:33] total 948876
[2026-02-19 13:35:33] -rw-r--r-- 2 ek ek 680544900 Feb 19 12:10 ATLAS.root_0
[2026-02-19 13:35:33] -rw-r--r-- 2 ek ek    597958 Feb 19 12:10 input.tar.gz
[2026-02-19 13:35:33] -rw-r--r-- 2 ek ek     15845 Feb 19 12:10 start_atlas.sh
[2026-02-19 13:35:33] -rw------- 1 ek ek 289453716 Feb 19 13:34 HITS.pool.root.1
[2026-02-19 13:35:33] -rw------- 1 ek ek   1024000 Feb 19 13:35 result.tar.gz
13:35:34 (1945493): run_atlas exited; CPU time 19525.674485
13:35:34 (1945493): called boinc_finish(0)

</stderr_txt>
]]>

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