Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
13:35:37 (2015267): wrapper (7.7.26015): starting
13:35:37 (2015267): wrapper: running run_atlas (--nthreads 4)
[2026-02-19 13:35:37] Arguments: --nthreads 4
[2026-02-19 13:35:37] Threads: 4
[2026-02-19 13:35:37] Checking for CVMFS
[2026-02-19 13:35:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-19 13:35:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-19 13:35:37] Running cvmfs_config stat atlas.cern.ch
[2026-02-19 13:35:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-19 13:35:38] 2.13.3.0 11582 5091 46660 156409 1 50 28081492 33554432 0 130560 0 2616776 99.987 197317 221 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-02-19 13:35:38] CVMFS is ok
[2026-02-19 13:35:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-19 13:35:38] Checking for apptainer binary...
[2026-02-19 13:35:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-19 13:35:38] Running /usr/bin/apptainer --version
[2026-02-19 13:35:38] apptainer version 1.4.5
[2026-02-19 13:35:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-19 13:35:38] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-02-19 13:35:38] apptainer works
[2026-02-19 13:35:38] Set ATHENA_PROC_NUMBER=4
[2026-02-19 13:35:38] Set ATHENA_CORE_NUMBER=4
[2026-02-19 13:35:38] Starting ATLAS job with PandaID=7018383517
[2026-02-19 13:35:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-19 15:01:59]  *** The last 200 lines of the pilot log: ***
[2026-02-19 15:01:59]  is_altstaged=None
[2026-02-19 15:01:59]  is_tar=False
[2026-02-19 15:01:59]  lfn=log.48508763._020089.job.log.tgz.1
[2026-02-19 15:01:59]  mtime=0
[2026-02-19 15:01:59]  protocol_id=None
[2026-02-19 15:01:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-19 15:01:59]  replicas=None
[2026-02-19 15:01:59]  scope=mc23_13p6TeV
[2026-02-19 15:01:59]  status=None
[2026-02-19 15:01:59]  status_code=0
[2026-02-19 15:01:59]  storage_token=
[2026-02-19 15:01:59]  surl=/home/ek/BOINC/slots/0/PanDA_Pilot-7018383517/log.48508763._020089.job.log.tgz.1
[2026-02-19 15:01:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/37/log.48508763._020089.job.log.tgz.1
[2026-02-19 15:01:59]  workdir=None
[2026-02-19 15:01:59] ]
[2026-02-19 15:01:59] 2026-02-19 13:01:11,175 | INFO     | transferring file log.48508763._020089.job.log.tgz.1 from /home/ek/BOINC/slots/0/PanDA_Pilot-7018383517/log.48508763._020089.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-02-19 15:01:59] 2026-02-19 13:01:11,175 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/0/PanDA_Pilot-7018383517/log.48508763._020089.job.log.tgz.1 /home/ek/BOINC/slots/0/log.48508763._020089.job
[2026-02-19 15:01:59] 2026-02-19 13:01:11,183 | INFO     | adding to output.list: log.48508763._020089.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/37/log.48508763._020089.job.log.tg
[2026-02-19 15:01:59] 2026-02-19 13:01:11,183 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-19 15:01:59] 2026-02-19 13:01:11,183 | INFO     | summary of transferred files:
[2026-02-19 15:01:59] 2026-02-19 13:01:11,184 | INFO     |  -- lfn=log.48508763._020089.job.log.tgz.1, status_code=0, status=transferred
[2026-02-19 15:01:59] 2026-02-19 13:01:11,184 | INFO     | stage-out finished correctly
[2026-02-19 15:01:59] 2026-02-19 13:01:11,635 | INFO     | monitor loop #392: job 0:7018383517 is in state 'finished'
[2026-02-19 15:01:59] 2026-02-19 13:01:11,635 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-19 15:01:59] 2026-02-19 13:01:11,795 | INFO     | time since job start (5124s) is within the limit (349056.0s)
[2026-02-19 15:01:59] 2026-02-19 13:01:13,426 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-19 15:01:59] 2026-02-19 13:01:13,795 | INFO     | time since job start (5126s) is within the limit (349056.0s)
[2026-02-19 15:01:59] 2026-02-19 13:01:14,138 | INFO     | monitor loop #393: job 0:7018383517 is in state 'finished'
[2026-02-19 15:01:59] 2026-02-19 13:01:14,138 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-19 15:01:59] 2026-02-19 13:01:15,589 | INFO     | job 7018383517 has state=finished
[2026-02-19 15:01:59] 2026-02-19 13:01:15,589 | INFO     | preparing for final server update for job 7018383517 in state='finished'
[2026-02-19 15:01:59] 2026-02-19 13:01:15,801 | INFO     | time since job start (5128s) is within the limit (349056.0s)
[2026-02-19 15:01:59] 2026-02-19 13:01:16,469 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-19 15:01:59] 2026-02-19 13:01:16,469 | INFO     | reading metadata from: /home/ek/BOINC/slots/0/PanDA_Pilot-7018383517/jobReport.json
[2026-02-19 15:01:59] 2026-02-19 13:01:16,470 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/0/workernode_map.json
[2026-02-19 15:01:59] 2026-02-19 13:01:16,470 | INFO     | this job has now completed (state=finished)
[2026-02-19 15:01:59] 2026-02-19 13:01:16,470 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-19 15:01:59] 2026-02-19 13:01:16,470 | INFO     | log transfer has been attempted: DONE
[2026-02-19 15:01:59] 2026-02-19 13:01:16,470 | INFO     | job 7018383517 has finished - writing final server update
[2026-02-19 15:01:59] 2026-02-19 13:01:16,470 | INFO     | total number of processed events: 400 (read)
[2026-02-19 15:01:59] 2026-02-19 13:01:16,472 | INFO     | using path: /home/ek/BOINC/slots/0/PanDA_Pilot-7018383517/memory_monitor_summary.json (trf name=prmon)
[2026-02-19 15:01:59] 2026-02-19 13:01:16,472 | INFO     | extracted standard info from prmon json
[2026-02-19 15:01:59] 2026-02-19 13:01:16,472 | INFO     | extracted standard memory fields from prmon json
[2026-02-19 15:01:59] 2026-02-19 13:01:16,472 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-19 15:01:59] 2026-02-19 13:01:16,472 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-19 15:01:59] 2026-02-19 13:01:16,472 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-19 15:01:59] 2026-02-19 13:01:16,473 | INFO     | fitting pss+swap vs Time
[2026-02-19 15:01:59] 2026-02-19 13:01:16,473 | INFO     | sum of square deviations: 141539398.0
[2026-02-19 15:01:59] 2026-02-19 13:01:16,473 | INFO     | sum of deviations: -15671586005.999996
[2026-02-19 15:01:59] 2026-02-19 13:01:16,473 | INFO     | mean x: 1771503586.0
[2026-02-19 15:01:59] 2026-02-19 13:01:16,473 | INFO     | mean y: 2529835.4935064935
[2026-02-19 15:01:59] 2026-02-19 13:01:16,473 | INFO     | intersect: 196147710613.61447
[2026-02-19 15:01:59] 2026-02-19 13:01:16,473 | INFO     | chi2: 0.16667788496484956
[2026-02-19 15:01:59] 2026-02-19 13:01:16,473 | INFO     | current memory leak: -110.72 B/s (using 77 data points, chi2=0.17)
[2026-02-19 15:01:59] 2026-02-19 13:01:16,473 | INFO     | could have reported an average CPU frequency of 3299 MHz (6 samples)
[2026-02-19 15:01:59] 2026-02-19 13:01:16,473 | INFO     | ..............................
[2026-02-19 15:01:59] 2026-02-19 13:01:16,473 | INFO     | . Timing measurements:
[2026-02-19 15:01:59] 2026-02-19 13:01:16,473 | INFO     | . get job = 0 s
[2026-02-19 15:01:59] 2026-02-19 13:01:16,473 | INFO     | . initial setup = 3 s
[2026-02-19 15:01:59] 2026-02-19 13:01:16,474 | INFO     | . payload setup = 2 s
[2026-02-19 15:01:59] 2026-02-19 13:01:16,474 | INFO     | . stage-in = 0 s
[2026-02-19 15:01:59] 2026-02-19 13:01:16,474 | INFO     | . payload execution = 5106 s
[2026-02-19 15:01:59] 2026-02-19 13:01:16,474 | INFO     | . stage-out = 0 s
[2026-02-19 15:01:59] 2026-02-19 13:01:16,474 | INFO     | . log creation = 0 s
[2026-02-19 15:01:59] 2026-02-19 13:01:16,474 | INFO     | ..............................
[2026-02-19 15:01:59] 2026-02-19 13:01:16,499 | INFO     | 
[2026-02-19 15:01:59] 2026-02-19 13:01:16,499 | INFO     | job summary report
[2026-02-19 15:01:59] 2026-02-19 13:01:16,499 | INFO     | --------------------------------------------------
[2026-02-19 15:01:59] 2026-02-19 13:01:16,499 | INFO     | PanDA job id: 7018383517
[2026-02-19 15:01:59] 2026-02-19 13:01:16,499 | INFO     | task id: 48508763
[2026-02-19 15:01:59] 2026-02-19 13:01:16,499 | INFO     | errors: (none)
[2026-02-19 15:01:59] 2026-02-19 13:01:16,499 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-19 15:01:59] 2026-02-19 13:01:16,499 | INFO     | pilot state: finished 
[2026-02-19 15:01:59] 2026-02-19 13:01:16,499 | INFO     | transexitcode: 0
[2026-02-19 15:01:59] 2026-02-19 13:01:16,499 | INFO     | exeerrorcode: 0
[2026-02-19 15:01:59] 2026-02-19 13:01:16,499 | INFO     | exeerrordiag: 
[2026-02-19 15:01:59] 2026-02-19 13:01:16,499 | INFO     | exitcode: 0
[2026-02-19 15:01:59] 2026-02-19 13:01:16,499 | INFO     | exitmsg: OK
[2026-02-19 15:01:59] 2026-02-19 13:01:16,499 | INFO     | cpuconsumptiontime: 19596 s
[2026-02-19 15:01:59] 2026-02-19 13:01:16,499 | INFO     | nevents: 400
[2026-02-19 15:01:59] 2026-02-19 13:01:16,499 | INFO     | neventsw: 0
[2026-02-19 15:01:59] 2026-02-19 13:01:16,499 | INFO     | pid: 2023926
[2026-02-19 15:01:59] 2026-02-19 13:01:16,500 | INFO     | pgrp: 2023926
[2026-02-19 15:01:59] 2026-02-19 13:01:16,500 | INFO     | corecount: 4
[2026-02-19 15:01:59] 2026-02-19 13:01:16,500 | INFO     | event service: False
[2026-02-19 15:01:59] 2026-02-19 13:01:16,500 | INFO     | sizes: {0: 2281827, 1: 2282288, 11: 2282288, 5112: 2308756, 5113: 2317754, 5115: 2317810, 5118: 2318132}
[2026-02-19 15:01:59] 2026-02-19 13:01:16,500 | INFO     | --------------------------------------------------
[2026-02-19 15:01:59] 2026-02-19 13:01:16,500 | INFO     | 
[2026-02-19 15:01:59] 2026-02-19 13:01:16,500 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/0
[2026-02-19 15:01:59] 2026-02-19 13:01:16,509 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-19 15:01:59] 2026-02-19 13:01:16,509 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-19 15:01:59] 2026-02-19 13:01:16,509 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-19 15:01:59] 2026-02-19 13:01:16,510 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-19 15:01:59] 2026-02-19 13:01:16,510 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-19 15:01:59] 2026-02-19 13:01:16,510 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-19 15:01:59] 2026-02-19 13:01:16,510 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-19 15:01:59] 2026-02-19 13:01:16,510 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-19 15:01:59] 2026-02-19 13:01:16,510 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-19 15:01:59] 2026-02-19 13:01:16,510 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-19 15:01:59] 2026-02-19 13:01:16,510 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-19 15:01:59] 2026-02-19 13:01:16,510 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-19 15:01:59] 2026-02-19 13:01:16,510 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-19 15:01:59] 2026-02-19 13:01:16,510 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-19 15:01:59] 2026-02-19 13:01:16,510 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-19 15:01:59] 2026-02-19 13:01:16,510 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-19 15:01:59] 2026-02-19 13:01:16,510 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-19 15:01:59] 2026-02-19 13:01:16,510 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-19 15:01:59] 2026-02-19 13:01:16,510 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-19 15:01:59] 2026-02-19 13:01:16,510 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-19 15:01:59] 2026-02-19 13:01:16,510 | INFO     | job 7018383517 has completed (purged errors)
[2026-02-19 15:01:59] 2026-02-19 13:01:16,510 | INFO     | overall cleanup function is called
[2026-02-19 15:01:59] 2026-02-19 13:01:17,517 | INFO     | --- collectZombieJob: --- 10, [2023926]
[2026-02-19 15:01:59] 2026-02-19 13:01:17,517 | INFO     | zombie collector waiting for pid 2023926
[2026-02-19 15:01:59] 2026-02-19 13:01:17,517 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-19 15:01:59] 2026-02-19 13:01:17,517 | INFO     | collected zombie processes
[2026-02-19 15:01:59] 2026-02-19 13:01:17,517 | INFO     | will attempt to kill all subprocesses of pid=2023926
[2026-02-19 15:01:59] 2026-02-19 13:01:17,600 | INFO     | process IDs to be killed: [2023926] (in reverse order)
[2026-02-19 15:01:59] 2026-02-19 13:01:17,628 | WARNING  | found no corresponding commands to process id(s)
[2026-02-19 15:01:59] 2026-02-19 13:01:17,628 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-19 15:01:59] 2026-02-19 13:01:17,630 | INFO     | did not find any defunct processes belonging to 2023926
[2026-02-19 15:01:59] 2026-02-19 13:01:17,633 | INFO     | did not find any defunct processes belonging to 2023926
[2026-02-19 15:01:59] 2026-02-19 13:01:17,633 | INFO     | ready for new job
[2026-02-19 15:01:59] 2026-02-19 13:01:17,633 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-19 15:01:59] 2026-02-19 13:01:17,634 | INFO     | **************************************
[2026-02-19 15:01:59] 2026-02-19 13:01:17,634 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-19 15:01:59] 2026-02-19 13:01:17,634 | INFO     | **************************************
[2026-02-19 15:01:59] 2026-02-19 13:01:17,634 | INFO     | 
[2026-02-19 15:01:59] 2026-02-19 13:01:17,634 | INFO     | architecture information:
[2026-02-19 15:01:59] 2026-02-19 13:01:17,634 | INFO     | executing command: cat /etc/os-release
[2026-02-19 15:01:59] 2026-02-19 13:01:17,640 | INFO     | cat /etc/os-release:
[2026-02-19 15:01:59] NAME="CentOS Linux"
[2026-02-19 15:01:59] VERSION="7 (Core)"
[2026-02-19 15:01:59] ID="centos"
[2026-02-19 15:01:59] ID_LIKE="rhel fedora"
[2026-02-19 15:01:59] VERSION_ID="7"
[2026-02-19 15:01:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-19 15:01:59] ANSI_COLOR="0;31"
[2026-02-19 15:01:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-19 15:01:59] HOME_URL="https://www.centos.org/"
[2026-02-19 15:01:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-19 15:01:59] 
[2026-02-19 15:01:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-19 15:01:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-19 15:01:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-19 15:01:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-19 15:01:59] 
[2026-02-19 15:01:59] 2026-02-19 13:01:17,640 | INFO     | **************************************
[2026-02-19 15:01:59] 2026-02-19 13:01:18,143 | INFO     | executing command: df -mP /home/ek/BOINC/slots/0
[2026-02-19 15:01:59] 2026-02-19 13:01:18,150 | INFO     | sufficient remaining disk space (54045704192 B)
[2026-02-19 15:01:59] 2026-02-19 13:01:18,150 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-19 15:01:59] 2026-02-19 13:01:18,150 | INFO     | current server update state: UPDATING_FINAL
[2026-02-19 15:01:59] 2026-02-19 13:01:18,150 | INFO     | update_server=False
[2026-02-19 15:01:59] 2026-02-19 13:01:18,150 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-19 15:01:59] 2026-02-19 13:01:18,150 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-19 15:01:59] 2026-02-19 13:01:18,150 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-19 15:01:59] 2026-02-19 13:01:18,151 | INFO     | aborting loop
[2026-02-19 15:01:59] 2026-02-19 13:01:18,366 | INFO     | all data control threads have been joined
[2026-02-19 15:01:59] 2026-02-19 13:01:19,040 | INFO     | all job control threads have been joined
[2026-02-19 15:01:59] 2026-02-19 13:01:19,155 | INFO     | [job] job monitor thread has finished
[2026-02-19 15:01:59] 2026-02-19 13:01:19,155 | INFO     | [job] queue monitor thread has finished
[2026-02-19 15:01:59] 2026-02-19 13:01:19,155 | INFO     | [job] retrieve thread has finished
[2026-02-19 15:01:59] 2026-02-19 13:01:19,218 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-19 15:01:59] 2026-02-19 13:01:19,355 | INFO     | [payload] validate_post thread has finished
[2026-02-19 15:01:59] 2026-02-19 13:01:19,371 | INFO     | [data] control thread has finished
[2026-02-19 15:01:59] 2026-02-19 13:01:19,414 | INFO     | [data] copytool_in thread has finished
[2026-02-19 15:01:59] 2026-02-19 13:01:19,458 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-19 15:01:59] 2026-02-19 13:01:19,593 | INFO     | all payload control threads have been joined
[2026-02-19 15:01:59] 2026-02-19 13:01:20,045 | INFO     | [job] control thread has finished
[2026-02-19 15:01:59] 2026-02-19 13:01:20,255 | INFO     | [payload] failed_post thread has finished
[2026-02-19 15:01:59] 2026-02-19 13:01:20,258 | INFO     | [payload] execute_payloads thread has finished
[2026-02-19 15:01:59] 2026-02-19 13:01:20,557 | INFO     | [payload] validate_pre thread has finished
[2026-02-19 15:01:59] 2026-02-19 13:01:20,574 | INFO     | [job] validate thread has finished
[2026-02-19 15:01:59] 2026-02-19 13:01:20,598 | INFO     | [payload] control thread has finished
[2026-02-19 15:01:59] 2026-02-19 13:01:20,609 | INFO     | [job] create_data_payload thread has finished
[2026-02-19 15:01:59] 2026-02-19 13:01:21,220 | INFO     | [data] copytool_out thread has finished
[2026-02-19 15:01:59] 2026-02-19 13:01:23,459 | INFO     | [data] queue_monitor thread has finished
[2026-02-19 15:01:59] 2026-02-19 13:01:28,960 | INFO     | job.realtimelogging is not enabled
[2026-02-19 15:01:59] 2026-02-19 13:01:29,966 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-19 15:01:59] 2026-02-19 13:01:48,960 | INFO     | PID=2019084 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-19 15:01:59] 2026-02-19 13:01:48,960 | INFO     | found 0 job(s) in 20 queues
[2026-02-19 15:01:59] 2026-02-19 13:01:48,961 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-19 15:01:59] 2026-02-19 13:01:48,961 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-19 15:01:59] 2026-02-19 13:01:54,020 | INFO     | [monitor] cgroup control has ended
[2026-02-19 15:01:59] 2026-02-19 13:01:54,749 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140168675948352)>', '<ExcThread(monitor, started 140168187074304)>']
[2026-02-19 15:01:59] 2026-02-19 13:01:54,990 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-19 15:01:59] 2026-02-19 13:01:54,990 | INFO     | [monitor] control thread has ended
[2026-02-19 15:01:59] 2026-02-19 13:01:59,770 | INFO     | all workflow threads have been joined
[2026-02-19 15:01:59] 2026-02-19 13:01:59,770 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-19 15:01:59] 2026-02-19 13:01:59,770 | INFO     | traces error code: 0
[2026-02-19 15:01:59] 2026-02-19 13:01:59,771 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-19 15:01:59] 2026-02-19 13:01:59,811 [wrapper] ==== pilot stdout END ====
[2026-02-19 15:01:59] 2026-02-19 13:01:59,813 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-19 15:01:59] 2026-02-19 13:01:59,814 [wrapper] pilotpid: 2019084
[2026-02-19 15:01:59] 2026-02-19 13:01:59,816 [wrapper] Pilot exit status: 0
[2026-02-19 15:01:59] 2026-02-19 13:01:59,820 [wrapper] pandaids: 7018383517
[2026-02-19 15:01:59] 2026-02-19 13:01:59,842 [wrapper] cleanup supervisor_pilot 2078458 2019085
[2026-02-19 15:01:59] 2026-02-19 13:01:59,843 [wrapper] Test setup, not cleaning
[2026-02-19 15:01:59] 2026-02-19 13:01:59,845 [wrapper] apfmon messages muted
[2026-02-19 15:01:59] 2026-02-19 13:01:59,846 [wrapper] ==== wrapper stdout END ====
[2026-02-19 15:01:59] 2026-02-19 13:01:59,847 [wrapper] ==== wrapper stderr END ====
[2026-02-19 15:01:59]  *** Error codes and diagnostics ***
[2026-02-19 15:01:59]     "exeErrorCode": 0,
[2026-02-19 15:01:59]     "exeErrorDiag": "",
[2026-02-19 15:01:59]     "pilotErrorCode": 0,
[2026-02-19 15:01:59]     "pilotErrorDiag": "",
[2026-02-19 15:01:59]  *** Listing of results directory ***
[2026-02-19 15:01:59] total 953596
[2026-02-19 15:01:59] -rwx------ 1 ek ek     36322 Feb 17 15:40 runpilot2-wrapper.sh
[2026-02-19 15:01:59] -rw-r--r-- 1 ek ek      5111 Feb 17 15:43 queuedata.json
[2026-02-19 15:01:59] -rw-r--r-- 1 ek ek    584627 Feb 17 15:43 pilot3.tar.gz
[2026-02-19 15:01:59] -rw-rw-r-- 1 ek ek       100 Feb 19 13:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-19 15:01:59] -rwxr-xr-x 1 ek ek      7986 Feb 19 13:35 run_atlas
[2026-02-19 15:01:59] -rw-rw-r-- 1 ek ek       105 Feb 19 13:35 job.xml
[2026-02-19 15:01:59] -rw-r--r-- 2 ek ek 688114385 Feb 19 13:35 EVNT.48508760._000391.pool.root.1
[2026-02-19 15:01:59] drwxrwx--x 2 ek ek      4096 Feb 19 13:35 shared
[2026-02-19 15:01:59] -rw-r--r-- 2 ek ek    597953 Feb 19 13:35 input.tar.gz
[2026-02-19 15:01:59] -rw-r--r-- 2 ek ek     15845 Feb 19 13:35 start_atlas.sh
[2026-02-19 15:01:59] -rw-rw-r-- 1 ek ek         0 Feb 19 13:35 boinc_setup_complete
[2026-02-19 15:01:59] -rw-rw-r-- 1 ek ek      9842 Feb 19 13:35 init_data.xml
[2026-02-19 15:01:59] -rw-rw-r-- 1 ek ek         0 Feb 19 13:35 boinc_lockfile
[2026-02-19 15:01:59] -rw-rw-r-- 1 ek ek      2551 Feb 19 13:35 pandaJob.out
[2026-02-19 15:01:59] -rw------- 1 ek ek        50 Feb 19 13:35 setup.sh.local
[2026-02-19 15:01:59] -rw------- 1 ek ek   1001089 Feb 19 13:35 agis_schedconf.cvmfs.json
[2026-02-19 15:01:59] -rw------- 1 ek ek   1513015 Feb 19 13:35 agis_ddmendpoints.agis.ALL.json
[2026-02-19 15:01:59] -rw------- 1 ek ek       432 Feb 19 13:35 workernode_map.json
[2026-02-19 15:01:59] drwx------ 5 ek ek      4096 Feb 19 13:35 pilot3
[2026-02-19 15:01:59] -rw------- 1 ek ek 282327971 Feb 19 15:00 HITS.48508763._020089.pool.root.1
[2026-02-19 15:01:59] -rw-rw-r-- 1 ek ek       530 Feb 19 15:01 boinc_task_state.xml
[2026-02-19 15:01:59] -rw------- 1 ek ek      1018 Feb 19 15:01 memory_monitor_summary.json
[2026-02-19 15:01:59] -rw------- 1 ek ek    303183 Feb 19 15:01 log.48508763._020089.job.log.tgz.1
[2026-02-19 15:01:59] -rw------- 1 ek ek      6314 Feb 19 15:01 heartbeat.json
[2026-02-19 15:01:59] -rw-rw-r-- 1 ek ek      8192 Feb 19 15:01 boinc_mmap_file
[2026-02-19 15:01:59] -rw-rw-r-- 1 ek ek        27 Feb 19 15:01 wrapper_checkpoint.txt
[2026-02-19 15:01:59] -rw------- 1 ek ek        95 Feb 19 15:01 pilot_heartbeat.json
[2026-02-19 15:01:59] -rw------- 1 ek ek      4816 Feb 19 15:01 pilotlog.txt
[2026-02-19 15:01:59] -rw------- 1 ek ek    747429 Feb 19 15:01 log.48508763._020089.job.log.1
[2026-02-19 15:01:59] -rw------- 1 ek ek       357 Feb 19 15:01 output.list
[2026-02-19 15:01:59] -rw-rw-r-- 1 ek ek       620 Feb 19 15:01 runtime_log
[2026-02-19 15:01:59] -rw------- 1 ek ek   1064960 Feb 19 15:01 result.tar.gz
[2026-02-19 15:01:59] -rw-rw-r-- 1 ek ek      9501 Feb 19 15:01 runtime_log.err
[2026-02-19 15:01:59] -rw------- 1 ek ek       661 Feb 19 15:01 1YeLDmQUaC9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmyNuKDmsW9e7n.diag
[2026-02-19 15:01:59] -rw-rw-r-- 1 ek ek     21337 Feb 19 15:01 stderr.txt
[2026-02-19 15:01:59] HITS file was successfully produced:
[2026-02-19 15:01:59] -rw------- 1 ek ek 282327971 Feb 19 15:00 shared/HITS.pool.root.1
[2026-02-19 15:01:59]  *** Contents of shared directory: ***
[2026-02-19 15:01:59] total 949348
[2026-02-19 15:01:59] -rw-r--r-- 2 ek ek 688114385 Feb 19 13:35 ATLAS.root_0
[2026-02-19 15:01:59] -rw-r--r-- 2 ek ek    597953 Feb 19 13:35 input.tar.gz
[2026-02-19 15:01:59] -rw-r--r-- 2 ek ek     15845 Feb 19 13:35 start_atlas.sh
[2026-02-19 15:01:59] -rw------- 1 ek ek 282327971 Feb 19 15:00 HITS.pool.root.1
[2026-02-19 15:01:59] -rw------- 1 ek ek   1064960 Feb 19 15:01 result.tar.gz
15:02:01 (2015267): run_atlas exited; CPU time 19640.946125
15:02:01 (2015267): called boinc_finish(0)

</stderr_txt>
]]>

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