Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:44:41 (29519): wrapper (7.7.26015): starting
21:44:41 (29519): wrapper: running run_atlas (--nthreads 8)
[2026-02-17 21:44:41] Arguments: --nthreads 8
[2026-02-17 21:44:41] Threads: 8
[2026-02-17 21:44:41] Checking for CVMFS
[2026-02-17 21:44:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-17 21:44:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-17 21:44:46] Running cvmfs_config stat atlas.cern.ch
[2026-02-17 21:44:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-17 21:44:47] 2.11.2.0 27806 92054 140924 156340 1 54 17399405 25165824 4834 130560 0 31854308 99.810 22019016 3252 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-17 21:44:47] CVMFS is ok
[2026-02-17 21:44:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-17 21:44:47] Checking for apptainer binary...
[2026-02-17 21:44:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-17 21:44:47] Running /usr/bin/apptainer --version
[2026-02-17 21:44:47] apptainer version 1.3.2-1.el7
[2026-02-17 21:44:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-17 21:44:55] cg-vwn467.simple-grid.lan
[2026-02-17 21:44:55] apptainer works
[2026-02-17 21:44:55] Set ATHENA_PROC_NUMBER=8
[2026-02-17 21:44:55] Set ATHENA_CORE_NUMBER=8
[2026-02-17 21:44:55] Starting ATLAS job with PandaID=7014196550
[2026-02-17 21:44:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-18 03:35:28]  *** The last 200 lines of the pilot log: ***
[2026-02-18 03:35:28] 2026-02-18 02:34:33,690 | INFO     | job 7014196550 has finished - writing final server update
[2026-02-18 03:35:28] 2026-02-18 02:34:33,690 | INFO     | total number of processed events: 400 (read)
[2026-02-18 03:35:28] 2026-02-18 02:34:33,692 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7014196550/memory_monitor_summary.json (trf name=prmon)
[2026-02-18 03:35:28] 2026-02-18 02:34:33,693 | INFO     | extracted standard info from prmon json
[2026-02-18 03:35:28] 2026-02-18 02:34:33,693 | INFO     | extracted standard memory fields from prmon json
[2026-02-18 03:35:28] 2026-02-18 02:34:33,693 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-18 03:35:28] 2026-02-18 02:34:33,693 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-18 03:35:28] 2026-02-18 02:34:33,693 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-18 03:35:28] 2026-02-18 02:34:33,700 | INFO     | fitting pss+swap vs Time
[2026-02-18 03:35:28] 2026-02-18 02:34:33,701 | INFO     | sum of square deviations: 11657595320.0
[2026-02-18 03:35:28] 2026-02-18 02:34:33,704 | INFO     | sum of deviations: 117437811158.99997
[2026-02-18 03:35:28] 2026-02-18 02:34:33,705 | INFO     | mean x: 1771371832.0
[2026-02-18 03:35:28] 2026-02-18 02:34:33,705 | INFO     | mean y: 2525389.0925373132
[2026-02-18 03:35:28] 2026-02-18 02:34:33,705 | INFO     | intersect: -17842152264.273445
[2026-02-18 03:35:28] 2026-02-18 02:34:33,706 | INFO     | chi2: 6.786597508338963
[2026-02-18 03:35:28] 2026-02-18 02:34:33,709 | INFO     | sum of square deviations: 11143362422.5
[2026-02-18 03:35:28] 2026-02-18 02:34:33,713 | INFO     | sum of deviations: 138392496511.0
[2026-02-18 03:35:28] 2026-02-18 02:34:33,714 | INFO     | mean x: 1771371679.5
[2026-02-18 03:35:28] 2026-02-18 02:34:33,714 | INFO     | mean y: 2531521.624242424
[2026-02-18 03:35:28] 2026-02-18 02:34:33,714 | INFO     | intersect: -21996622744.408333
[2026-02-18 03:35:28] 2026-02-18 02:34:33,714 | INFO     | chi2: 6.057368130912459
[2026-02-18 03:35:28] 2026-02-18 02:34:33,715 | INFO     | current chi2=6.057368130912459 (change=10.745139615698015 %)
[2026-02-18 03:35:28] 2026-02-18 02:34:33,715 | INFO     | right removable region: 329
[2026-02-18 03:35:28] 2026-02-18 02:34:33,715 | INFO     | sum of square deviations: 11143362422.5
[2026-02-18 03:35:28] 2026-02-18 02:34:33,719 | INFO     | sum of deviations: 1776466521.9999924
[2026-02-18 03:35:28] 2026-02-18 02:34:33,719 | INFO     | mean x: 1771371984.5
[2026-02-18 03:35:28] 2026-02-18 02:34:33,719 | INFO     | mean y: 2559666.5515151517
[2026-02-18 03:35:28] 2026-02-18 02:34:33,720 | INFO     | intersect: -279831133.3850593
[2026-02-18 03:35:28] 2026-02-18 02:34:33,720 | INFO     | chi2: 2.4093969640115303
[2026-02-18 03:35:28] 2026-02-18 02:34:33,720 | INFO     | current chi2=2.4093969640115303 (change=64.49771831833246 %)
[2026-02-18 03:35:28] 2026-02-18 02:34:33,721 | INFO     | sum of square deviations: 10644478650.0
[2026-02-18 03:35:28] 2026-02-18 02:34:33,724 | INFO     | sum of deviations: -59036340765.0
[2026-02-18 03:35:28] 2026-02-18 02:34:33,725 | INFO     | mean x: 1771372137.0
[2026-02-18 03:35:28] 2026-02-18 02:34:33,725 | INFO     | mean y: 2578177.446153846
[2026-02-18 03:35:28] 2026-02-18 02:34:33,725 | INFO     | intersect: 9826951220.043056
[2026-02-18 03:35:28] 2026-02-18 02:34:33,725 | INFO     | chi2: 0.9566507618796444
[2026-02-18 03:35:28] 2026-02-18 02:34:33,726 | INFO     | current chi2=0.9566507618796444 (change=60.295012562526566 %)
[2026-02-18 03:35:28] 2026-02-18 02:34:33,726 | INFO     | sum of square deviations: 10160711440.0
[2026-02-18 03:35:28] 2026-02-18 02:34:33,730 | INFO     | sum of deviations: -61976807914.5
[2026-02-18 03:35:28] 2026-02-18 02:34:33,730 | INFO     | mean x: 1771372289.5
[2026-02-18 03:35:28] 2026-02-18 02:34:33,730 | INFO     | mean y: 2579089.109375
[2026-02-18 03:35:28] 2026-02-18 02:34:33,730 | INFO     | intersect: 10807334324.970062
[2026-02-18 03:35:28] 2026-02-18 02:34:33,731 | INFO     | chi2: 0.9369121341325805
[2026-02-18 03:35:28] 2026-02-18 02:34:33,731 | INFO     | current chi2=0.9369121341325805 (change=2.0633054959660635 %)
[2026-02-18 03:35:28] 2026-02-18 02:34:33,731 | INFO     | left removable region: 30
[2026-02-18 03:35:28] 2026-02-18 02:34:33,731 | INFO     | sum of square deviations: 8288713550.0
[2026-02-18 03:35:28] 2026-02-18 02:34:33,738 | INFO     | sum of deviations: -7592251967.000002
[2026-02-18 03:35:28] 2026-02-18 02:34:33,738 | INFO     | mean x: 1771372564.0
[2026-02-18 03:35:28] 2026-02-18 02:34:33,738 | INFO     | mean y: 2575326.5451505017
[2026-02-18 03:35:28] 2026-02-18 02:34:33,738 | INFO     | intersect: 1625107792.1916244
[2026-02-18 03:35:28] 2026-02-18 02:34:33,739 | INFO     | chi2: 0.06414995309541216
[2026-02-18 03:35:28] 2026-02-18 02:34:33,739 | INFO     | current memory leak: -0.92 B/s (using 299 data points, chi2=0.06)
[2026-02-18 03:35:28] 2026-02-18 02:34:33,740 | INFO     | could have reported an average CPU frequency of 2250 MHz (15 samples)
[2026-02-18 03:35:28] 2026-02-18 02:34:33,740 | INFO     | ..............................
[2026-02-18 03:35:28] 2026-02-18 02:34:33,740 | INFO     | . Timing measurements:
[2026-02-18 03:35:28] 2026-02-18 02:34:33,740 | INFO     | . get job = 0 s
[2026-02-18 03:35:28] 2026-02-18 02:34:33,740 | INFO     | . initial setup = 93 s
[2026-02-18 03:35:28] 2026-02-18 02:34:33,740 | INFO     | . payload setup = 128 s
[2026-02-18 03:35:28] 2026-02-18 02:34:33,740 | INFO     | . stage-in = 0 s
[2026-02-18 03:35:28] 2026-02-18 02:34:33,740 | INFO     | . payload execution = 20538 s
[2026-02-18 03:35:28] 2026-02-18 02:34:33,741 | INFO     | . stage-out = 3 s
[2026-02-18 03:35:28] 2026-02-18 02:34:33,741 | INFO     | . log creation = 1 s
[2026-02-18 03:35:28] 2026-02-18 02:34:33,741 | INFO     | ..............................
[2026-02-18 03:35:28] 2026-02-18 02:34:33,953 | INFO     | time since job start (20690s) is within the limit (349056.0s)
[2026-02-18 03:35:28] 2026-02-18 02:34:34,316 | INFO     | 
[2026-02-18 03:35:28] 2026-02-18 02:34:34,316 | INFO     | job summary report
[2026-02-18 03:35:28] 2026-02-18 02:34:34,316 | INFO     | --------------------------------------------------
[2026-02-18 03:35:28] 2026-02-18 02:34:34,316 | INFO     | PanDA job id: 7014196550
[2026-02-18 03:35:28] 2026-02-18 02:34:34,317 | INFO     | task id: 48508763
[2026-02-18 03:35:28] 2026-02-18 02:34:34,317 | INFO     | errors: (none)
[2026-02-18 03:35:28] 2026-02-18 02:34:34,317 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-18 03:35:28] 2026-02-18 02:34:34,317 | INFO     | pilot state: finished 
[2026-02-18 03:35:28] 2026-02-18 02:34:34,317 | INFO     | transexitcode: 0
[2026-02-18 03:35:28] 2026-02-18 02:34:34,317 | INFO     | exeerrorcode: 0
[2026-02-18 03:35:28] 2026-02-18 02:34:34,317 | INFO     | exeerrordiag: 
[2026-02-18 03:35:28] 2026-02-18 02:34:34,317 | INFO     | exitcode: 0
[2026-02-18 03:35:28] 2026-02-18 02:34:34,317 | INFO     | exitmsg: OK
[2026-02-18 03:35:28] 2026-02-18 02:34:34,317 | INFO     | cpuconsumptiontime: 80468 s
[2026-02-18 03:35:28] 2026-02-18 02:34:34,318 | INFO     | nevents: 400
[2026-02-18 03:35:28] 2026-02-18 02:34:34,318 | INFO     | neventsw: 0
[2026-02-18 03:35:28] 2026-02-18 02:34:34,318 | INFO     | pid: 5739
[2026-02-18 03:35:28] 2026-02-18 02:34:34,318 | INFO     | pgrp: 5739
[2026-02-18 03:35:28] 2026-02-18 02:34:34,318 | INFO     | corecount: 8
[2026-02-18 03:35:28] 2026-02-18 02:34:34,318 | INFO     | event service: False
[2026-02-18 03:35:28] 2026-02-18 02:34:34,318 | INFO     | sizes: {0: 2281771, 1: 2282228, 2: 2282288, 12: 2282316, 20670: 2315832, 20674: 2324830, 20677: 2325014, 20678: 2325208}
[2026-02-18 03:35:28] 2026-02-18 02:34:34,318 | INFO     | --------------------------------------------------
[2026-02-18 03:35:28] 2026-02-18 02:34:34,318 | INFO     | 
[2026-02-18 03:35:28] 2026-02-18 02:34:34,318 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-02-18 03:35:28] 2026-02-18 02:34:34,706 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-18 03:35:28] 2026-02-18 02:34:34,707 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-18 03:35:28] 2026-02-18 02:34:34,707 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-18 03:35:28] 2026-02-18 02:34:34,707 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-18 03:35:28] 2026-02-18 02:34:34,707 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-18 03:35:28] 2026-02-18 02:34:34,707 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-18 03:35:28] 2026-02-18 02:34:34,707 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-18 03:35:28] 2026-02-18 02:34:34,708 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-18 03:35:28] 2026-02-18 02:34:34,708 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-18 03:35:28] 2026-02-18 02:34:34,708 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-18 03:35:28] 2026-02-18 02:34:34,708 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-18 03:35:28] 2026-02-18 02:34:34,708 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-18 03:35:28] 2026-02-18 02:34:34,708 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-18 03:35:28] 2026-02-18 02:34:34,708 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-18 03:35:28] 2026-02-18 02:34:34,708 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-18 03:35:28] 2026-02-18 02:34:34,708 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-18 03:35:28] 2026-02-18 02:34:34,709 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-18 03:35:28] 2026-02-18 02:34:34,709 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-18 03:35:28] 2026-02-18 02:34:34,709 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-18 03:35:28] 2026-02-18 02:34:34,709 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-18 03:35:28] 2026-02-18 02:34:34,709 | INFO     | job 7014196550 has completed (purged errors)
[2026-02-18 03:35:28] 2026-02-18 02:34:34,709 | INFO     | overall cleanup function is called
[2026-02-18 03:35:28] 2026-02-18 02:34:35,718 | INFO     | --- collectZombieJob: --- 10, [5739]
[2026-02-18 03:35:28] 2026-02-18 02:34:35,718 | INFO     | zombie collector waiting for pid 5739
[2026-02-18 03:35:28] 2026-02-18 02:34:35,718 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-18 03:35:28] 2026-02-18 02:34:35,719 | INFO     | collected zombie processes
[2026-02-18 03:35:28] 2026-02-18 02:34:35,719 | INFO     | will attempt to kill all subprocesses of pid=5739
[2026-02-18 03:35:28] 2026-02-18 02:34:35,831 | INFO     | process IDs to be killed: [5739] (in reverse order)
[2026-02-18 03:35:28] 2026-02-18 02:34:36,420 | WARNING  | found no corresponding commands to process id(s)
[2026-02-18 03:35:28] 2026-02-18 02:34:36,420 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-18 03:35:28] 2026-02-18 02:34:36,423 | INFO     | did not find any defunct processes belonging to 5739
[2026-02-18 03:35:28] 2026-02-18 02:34:36,426 | INFO     | did not find any defunct processes belonging to 5739
[2026-02-18 03:35:28] 2026-02-18 02:34:36,426 | INFO     | ready for new job
[2026-02-18 03:35:28] 2026-02-18 02:34:36,427 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-18 03:35:28] 2026-02-18 02:34:36,429 | INFO     | **************************************
[2026-02-18 03:35:28] 2026-02-18 02:34:36,429 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-18 03:35:28] 2026-02-18 02:34:36,429 | INFO     | **************************************
[2026-02-18 03:35:28] 2026-02-18 02:34:36,429 | INFO     | 
[2026-02-18 03:35:28] 2026-02-18 02:34:36,430 | INFO     | pilot is running in a VM
[2026-02-18 03:35:28] 2026-02-18 02:34:36,430 | INFO     | architecture information:
[2026-02-18 03:35:28] 2026-02-18 02:34:36,433 | INFO     | executing command: cat /etc/os-release
[2026-02-18 03:35:28] 2026-02-18 02:34:36,569 | INFO     | cat /etc/os-release:
[2026-02-18 03:35:28] NAME="CentOS Linux"
[2026-02-18 03:35:28] VERSION="7 (Core)"
[2026-02-18 03:35:28] ID="centos"
[2026-02-18 03:35:28] ID_LIKE="rhel fedora"
[2026-02-18 03:35:28] VERSION_ID="7"
[2026-02-18 03:35:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-18 03:35:28] ANSI_COLOR="0;31"
[2026-02-18 03:35:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-18 03:35:28] HOME_URL="https://www.centos.org/"
[2026-02-18 03:35:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-18 03:35:28] 
[2026-02-18 03:35:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-18 03:35:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-18 03:35:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-18 03:35:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-18 03:35:28] 
[2026-02-18 03:35:28] 2026-02-18 02:34:36,569 | INFO     | **************************************
[2026-02-18 03:35:28] 2026-02-18 02:34:37,072 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-02-18 03:35:28] 2026-02-18 02:34:37,217 | INFO     | sufficient remaining disk space (493572063232 B)
[2026-02-18 03:35:28] 2026-02-18 02:34:37,217 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-18 03:35:28] 2026-02-18 02:34:37,217 | INFO     | current server update state: UPDATING_FINAL
[2026-02-18 03:35:28] 2026-02-18 02:34:37,217 | INFO     | update_server=False
[2026-02-18 03:35:28] 2026-02-18 02:34:37,217 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-18 03:35:28] 2026-02-18 02:34:37,218 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-18 03:35:28] 2026-02-18 02:34:37,218 | INFO     | aborting loop
[2026-02-18 03:35:28] 2026-02-18 02:34:37,325 | INFO     | all payload control threads have been joined
[2026-02-18 03:35:28] 2026-02-18 02:34:37,612 | INFO     | all job control threads have been joined
[2026-02-18 03:35:28] 2026-02-18 02:34:37,753 | INFO     | all data control threads have been joined
[2026-02-18 03:35:28] 2026-02-18 02:34:38,140 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-18 03:35:28] 2026-02-18 02:34:38,223 | INFO     | [job] retrieve thread has finished
[2026-02-18 03:35:28] 2026-02-18 02:34:38,224 | INFO     | [job] job monitor thread has finished
[2026-02-18 03:35:28] 2026-02-18 02:34:38,304 | INFO     | [payload] validate_pre thread has finished
[2026-02-18 03:35:28] 2026-02-18 02:34:38,331 | INFO     | [payload] control thread has finished
[2026-02-18 03:35:28] 2026-02-18 02:34:38,462 | INFO     | [payload] validate_post thread has finished
[2026-02-18 03:35:28] 2026-02-18 02:34:38,483 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-18 03:35:28] 2026-02-18 02:34:38,618 | INFO     | [job] control thread has finished
[2026-02-18 03:35:28] 2026-02-18 02:34:38,658 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-18 03:35:28] 2026-02-18 02:34:38,759 | INFO     | [data] control thread has finished
[2026-02-18 03:35:28] 2026-02-18 02:34:38,797 | INFO     | [data] copytool_in thread has finished
[2026-02-18 03:35:28] 2026-02-18 02:34:38,884 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-18 03:35:28] 2026-02-18 02:34:39,048 | INFO     | [job] validate thread has finished
[2026-02-18 03:35:28] 2026-02-18 02:34:39,133 | INFO     | [payload] execute_payloads thread has finished
[2026-02-18 03:35:28] 2026-02-18 02:34:39,251 | INFO     | [payload] failed_post thread has finished
[2026-02-18 03:35:28] 2026-02-18 02:34:39,564 | INFO     | [job] create_data_payload thread has finished
[2026-02-18 03:35:28] 2026-02-18 02:34:39,889 | INFO     | [job] queue monitor thread has finished
[2026-02-18 03:35:28] 2026-02-18 02:34:40,147 | INFO     | [data] copytool_out thread has finished
[2026-02-18 03:35:28] 2026-02-18 02:34:42,492 | INFO     | [data] queue_monitor thread has finished
[2026-02-18 03:35:28] 2026-02-18 02:35:07,171 | INFO     | PID=1206 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-18 03:35:28] 2026-02-18 02:35:07,172 | INFO     | .. there are 9 such processes running
[2026-02-18 03:35:28] 2026-02-18 02:35:07,173 | INFO     | found 0 job(s) in 20 queues
[2026-02-18 03:35:28] 2026-02-18 02:35:07,173 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-18 03:35:28] 2026-02-18 02:35:07,173 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-18 03:35:28] 2026-02-18 02:35:18,662 | INFO     | [monitor] cgroup control has ended
[2026-02-18 03:35:28] 2026-02-18 02:35:18,919 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140145905170240)>', '<ExcThread(monitor, started 140145235842816)>']
[2026-02-18 03:35:28] 2026-02-18 02:35:19,245 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-18 03:35:28] 2026-02-18 02:35:19,245 | INFO     | [monitor] control thread has ended
[2026-02-18 03:35:28] 2026-02-18 02:35:23,945 | INFO     | all workflow threads have been joined
[2026-02-18 03:35:28] 2026-02-18 02:35:23,945 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-18 03:35:28] 2026-02-18 02:35:23,945 | INFO     | traces error code: 0
[2026-02-18 03:35:28] 2026-02-18 02:35:23,946 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-18 03:35:28] 2026-02-18 02:35:24,226 [wrapper] ==== pilot stdout END ====
[2026-02-18 03:35:28] 2026-02-18 02:35:24,296 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-18 03:35:28] 2026-02-18 02:35:24,377 [wrapper] pilotpid: 1206
[2026-02-18 03:35:28] 2026-02-18 02:35:24,482 [wrapper] Pilot exit status: 0
[2026-02-18 03:35:28] 2026-02-18 02:35:24,852 [wrapper] pandaids: 7014196550
[2026-02-18 03:35:28] 2026-02-18 02:35:25,724 [wrapper] cleanup supervisor_pilot 15843 1207
[2026-02-18 03:35:28] 2026-02-18 02:35:25,804 [wrapper] Test setup, not cleaning
[2026-02-18 03:35:28] 2026-02-18 02:35:25,888 [wrapper] apfmon messages muted
[2026-02-18 03:35:28] 2026-02-18 02:35:25,980 [wrapper] ==== wrapper stdout END ====
[2026-02-18 03:35:28] 2026-02-18 02:35:26,073 [wrapper] ==== wrapper stderr END ====
[2026-02-18 03:35:28]  *** Error codes and diagnostics ***
[2026-02-18 03:35:28]     "exeErrorCode": 0,
[2026-02-18 03:35:28]     "exeErrorDiag": "",
[2026-02-18 03:35:28]     "pilotErrorCode": 0,
[2026-02-18 03:35:28]     "pilotErrorDiag": "",
[2026-02-18 03:35:28]  *** Listing of results directory ***
[2026-02-18 03:35:28] total 947656
[2026-02-18 03:35:28] -rw-r--r--. 1 boinc boinc    584627 Feb 16 12:56 pilot3.tar.gz
[2026-02-18 03:35:28] -rwx------. 1 boinc boinc     36322 Feb 16 12:58 runpilot2-wrapper.sh
[2026-02-18 03:35:28] -rw-r--r--. 1 boinc boinc      5111 Feb 16 13:00 queuedata.json
[2026-02-18 03:35:28] -rw-r--r--. 1 boinc boinc       100 Feb 17 21:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-18 03:35:28] -rwxr-xr-x. 1 boinc boinc      7986 Feb 17 21:44 run_atlas
[2026-02-18 03:35:28] -rw-r--r--. 1 boinc boinc       105 Feb 17 21:44 job.xml
[2026-02-18 03:35:28] -rw-r--r--. 1 boinc boinc      6390 Feb 17 21:44 init_data.xml
[2026-02-18 03:35:28] -rw-r--r--. 2 boinc boinc 679194466 Feb 17 21:44 EVNT.48508760._000223.pool.root.1
[2026-02-18 03:35:28] -rw-r--r--. 2 boinc boinc     15845 Feb 17 21:44 start_atlas.sh
[2026-02-18 03:35:28] drwxrwx--x. 2 boinc boinc        68 Feb 17 21:44 shared
[2026-02-18 03:35:28] -rw-r--r--. 2 boinc boinc    597954 Feb 17 21:44 input.tar.gz
[2026-02-18 03:35:28] -rw-r--r--. 1 boinc boinc         0 Feb 17 21:44 boinc_lockfile
[2026-02-18 03:35:28] -rw-r--r--. 1 boinc boinc      2551 Feb 17 21:44 pandaJob.out
[2026-02-18 03:35:28] -rw-------. 1 boinc boinc       413 Feb 17 21:49 workernode_map.json
[2026-02-18 03:35:28] -rw-------. 1 boinc boinc    999364 Feb 17 21:49 agis_schedconf.cvmfs.json
[2026-02-18 03:35:28] drwx------. 5 boinc boinc      4096 Feb 17 21:49 pilot3
[2026-02-18 03:35:28] -rw-------. 1 boinc boinc 280407876 Feb 18 03:32 HITS.48508763._011334.pool.root.1
[2026-02-18 03:35:28] -rw-r--r--. 1 boinc boinc       531 Feb 18 03:33 boinc_task_state.xml
[2026-02-18 03:35:28] -rw-------. 1 boinc boinc      1011 Feb 18 03:34 memory_monitor_summary.json
[2026-02-18 03:35:28] -rw-------. 1 boinc boinc   1513015 Feb 18 03:34 agis_ddmendpoints.agis.ALL.json
[2026-02-18 03:35:28] -rw-------. 1 boinc boinc    575263 Feb 18 03:34 log.48508763._011334.job.log.tgz.1
[2026-02-18 03:35:28] -rw-------. 1 boinc boinc      6312 Feb 18 03:34 heartbeat.json
[2026-02-18 03:35:28] -rw-------. 1 boinc boinc        95 Feb 18 03:35 pilot_heartbeat.json
[2026-02-18 03:35:28] -rw-------. 1 boinc boinc      4879 Feb 18 03:35 pilotlog.txt
[2026-02-18 03:35:28] -rw-------. 1 boinc boinc   2867407 Feb 18 03:35 log.48508763._011334.job.log.1
[2026-02-18 03:35:28] -rw-r--r--. 1 boinc boinc      8192 Feb 18 03:35 boinc_mmap_file
[2026-02-18 03:35:28] -rw-r--r--. 1 boinc boinc        28 Feb 18 03:35 wrapper_checkpoint.txt
[2026-02-18 03:35:28] -rw-------. 1 boinc boinc       357 Feb 18 03:35 output.list
[2026-02-18 03:35:28] -rw-r--r--. 1 boinc boinc       620 Feb 18 03:35 runtime_log
[2026-02-18 03:35:28] -rw-------. 1 boinc boinc   3461120 Feb 18 03:35 result.tar.gz
[2026-02-18 03:35:28] -rw-r--r--. 1 boinc boinc      8816 Feb 18 03:35 runtime_log.err
[2026-02-18 03:35:28] -rw-------. 1 boinc boinc       656 Feb 18 03:35 pQ9MDm4PCC9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmqBsKDmUdYKNm.diag
[2026-02-18 03:35:28] -rw-r--r--. 1 boinc boinc     20724 Feb 18 03:35 stderr.txt
[2026-02-18 03:35:28] HITS file was successfully produced:
[2026-02-18 03:35:28] -rw-------. 1 boinc boinc 280407876 Feb 18 03:32 shared/HITS.pool.root.1
[2026-02-18 03:35:28]  *** Contents of shared directory: ***
[2026-02-18 03:35:28] total 941092
[2026-02-18 03:35:28] -rw-r--r--. 2 boinc boinc 679194466 Feb 17 21:44 ATLAS.root_0
[2026-02-18 03:35:28] -rw-r--r--. 2 boinc boinc     15845 Feb 17 21:44 start_atlas.sh
[2026-02-18 03:35:28] -rw-r--r--. 2 boinc boinc    597954 Feb 17 21:44 input.tar.gz
[2026-02-18 03:35:28] -rw-------. 1 boinc boinc 280407876 Feb 18 03:32 HITS.pool.root.1
[2026-02-18 03:35:28] -rw-------. 1 boinc boinc   3461120 Feb 18 03:35 result.tar.gz
03:35:30 (29519): run_atlas exited; CPU time 80768.519267
03:35:30 (29519): called boinc_finish(0)

</stderr_txt>
]]>

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