Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-24 04:05:27 (9424): vboxwrapper version 26210
2026-02-24 04:05:27 (9424): BOINC client version: 8.2.8
2026-02-24 04:05:28 (9424): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2026-02-24 04:05:28 (9424): Successfully copied 'init_data.xml' to the shared directory.
2026-02-24 04:05:28 (9424): Create VM. (boinc_9ba040d13e25ec02, slot#4)
2026-02-24 04:05:29 (9424): Setting Memory Size for VM. (4300MB)
2026-02-24 04:05:29 (9424): Setting CPU Count for VM. (3)
2026-02-24 04:05:29 (9424): Setting Chipset Options for VM.
2026-02-24 04:05:30 (9424): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-24 04:05:30 (9424): Setting Boot Options for VM.
2026-02-24 04:05:31 (9424): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-24 04:05:31 (9424): Enabling VM Network Access.
2026-02-24 04:05:31 (9424): Disabling USB Support for VM.
2026-02-24 04:05:31 (9424): Disabling COM Port Support for VM.
2026-02-24 04:05:32 (9424): Disabling LPT Port Support for VM.
2026-02-24 04:05:32 (9424): Disabling Audio Support for VM.
2026-02-24 04:05:32 (9424): Disabling Clipboard Support for VM.
2026-02-24 04:05:32 (9424): Disabling Drag and Drop Support for VM.
2026-02-24 04:05:33 (9424): Adding storage controller(s) to VM.
2026-02-24 04:05:33 (9424): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-24 04:05:35 (9424): Adding VirtualBox Guest Additions to VM.
2026-02-24 04:05:35 (9424): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-24 04:05:36 (9424): forwarding host port 64442 to guest port 80
2026-02-24 04:05:36 (9424): Enabling remote desktop for VM.
2026-02-24 04:05:36 (9424): Required extension pack not installed, remote desktop not enabled.
2026-02-24 04:05:36 (9424): Enabling shared directory for VM.
2026-02-24 04:05:37 (9424): Starting VM using VBoxManage interface. (boinc_9ba040d13e25ec02, slot#4)
2026-02-24 04:05:44 (9424): Successfully started VM. (PID = '15188')
2026-02-24 04:05:44 (9424): Reporting VM Process ID to BOINC.
2026-02-24 04:05:44 (9424): Guest Log: BIOS: VirtualBox 7.0.14
2026-02-24 04:05:44 (9424): Guest Log: CPUID EDX: 0x178bfbff
2026-02-24 04:05:44 (9424): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-24 04:05:44 (9424): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-24 04:05:44 (9424): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-24 04:05:44 (9424): Detected: Web Application Enabled (http://localhost:64442)
2026-02-24 04:05:44 (9424): Preference change detected
2026-02-24 04:05:44 (9424): Setting CPU throttle for VM. (100%)
2026-02-24 04:05:44 (9424): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-24 04:05:46 (9424): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-24 04:05:46 (9424): Guest Log: BIOS: Booting from Hard Disk...
2026-02-24 04:05:49 (9424): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-24 04:05:49 (9424): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-24 04:05:49 (9424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-24 04:05:56 (9424): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-24 04:05:56 (9424): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-24 04:06:02 (9424): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-24 04:06:02 (9424): Guest Log: 00:00:00.000184 main     Log opened 2026-02-24T04:06:00.251560000Z
2026-02-24 04:06:02 (9424): Guest Log: 00:00:00.000320 main     OS Product: Linux
2026-02-24 04:06:02 (9424): Guest Log: 00:00:00.000367 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-24 04:06:02 (9424): Guest Log: 00:00:00.000398 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-24 04:06:02 (9424): Guest Log: 00:00:00.000428 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-24 04:06:02 (9424): Guest Log: 00:00:00.000429 main     Process ID: 1289
2026-02-24 04:06:02 (9424): Guest Log: 00:00:00.000429 main     Package type: LINUX_64BITS_GENERIC
2026-02-24 04:06:02 (9424): Guest Log: 00:00:00.002254 main     5.2.32 r132073 started. Verbose level = 0
2026-02-24 04:06:02 (9424): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-24 04:06:02 (9424): Guest Log: [INFO] Mounting shared directory
2026-02-24 04:06:02 (9424): Guest Log: [INFO] Checking for init_data.xml
2026-02-24 04:06:07 (9424): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-24 04:06:07 (9424): Guest Log: [INFO] Detected branch: prod
2026-02-24 04:06:07 (9424): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-24 04:06:07 (9424): Guest Log: Copying input files
2026-02-24 04:06:10 (9424): Guest Log: Copied input files into RunAtlas.
2026-02-24 04:06:10 (9424): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-24 04:06:10 (9424): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-24 04:06:10 (9424): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-24 04:06:10 (9424): Guest Log: Further information can be found at the LHC@home message board.
2026-02-24 04:06:12 (9424): Guest Log: 00:00:10.007742 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 615 957 000ns (GuestNow=1 771 923 971 874 013 000 ns GuestLast=1 771 905 960 258 056 000 ns fSetTimeLastLoop=true )
2026-02-24 04:06:21 (9424): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-24 04:06:21 (9424): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-24 04:06:21 (9424): Guest Log: 2.6.3.0 1588 0 30148 156566 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-24 04:06:22 (9424): Guest Log: copied the webapp to /var/www
2026-02-24 04:06:22 (9424): Guest Log: ATHENA_PROC_NUMBER=3
2026-02-24 04:06:22 (9424): Guest Log: ATHENA_CORE_NUMBER=3
2026-02-24 04:06:22 (9424): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-24 04:06:22 (9424): Guest Log:  *** Starting ATLAS job. (PandaID=7017710904 taskID=48318034) ***
2026-02-24 05:46:14 (9424): Status Report: Elapsed Time: '6000.000000'
2026-02-24 05:46:14 (9424): Status Report: CPU Time: '16767.921875'
2026-02-24 07:26:49 (9424): Status Report: Elapsed Time: '12000.398264'
2026-02-24 07:26:49 (9424): Status Report: CPU Time: '34484.390625'
2026-02-24 07:29:45 (9424): Preference change detected
2026-02-24 07:29:45 (9424): Setting CPU throttle for VM. (100%)
2026-02-24 07:29:45 (9424): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-24 08:03:44 (9424): Guest Log:  *** Job finished ***
2026-02-24 08:03:44 (9424): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-24 08:03:44 (9424): Guest Log: 2026-02-24 13:03:22,280 | INFO     | [data] copytool_out thread has finished
2026-02-24 08:03:44 (9424): Guest Log: 2026-02-24 13:03:23,004 | INFO     | [data] queue_monitor thread has finished
2026-02-24 08:03:44 (9424): Guest Log: 2026-02-24 13:03:37,489 | INFO     | [monitor] cgroup control has ended
2026-02-24 08:03:44 (9424): Guest Log: 2026-02-24 13:03:37,651 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140256935294784)>', '<ExcThread(monitor, started 140256468768512)>']
2026-02-24 08:03:44 (9424): Guest Log: 2026-02-24 13:03:38,044 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-24 08:03:44 (9424): Guest Log: 2026-02-24 13:03:38,044 | INFO     | [monitor] control thread has ended
2026-02-24 08:03:44 (9424): Guest Log: 2026-02-24 13:03:42,656 | INFO     | all workflow threads have been joined
2026-02-24 08:03:44 (9424): Guest Log: 2026-02-24 13:03:42,656 | INFO     | end of generic workflow (traces error code: 0)
2026-02-24 08:03:44 (9424): Guest Log: 2026-02-24 13:03:42,656 | INFO     | traces error code: 0
2026-02-24 08:03:44 (9424): Guest Log: 2026-02-24 13:03:42,656 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-24 08:03:44 (9424): Guest Log: 2026-02-24 13:03:42,754 [wrapper] ==== pilot stdout END ====
2026-02-24 08:03:44 (9424): Guest Log: 2026-02-24 13:03:42,760 [wrapper] ==== wrapper stdout RESUME ====
2026-02-24 08:03:44 (9424): Guest Log: 2026-02-24 13:03:42,764 [wrapper] pilotpid: 5972
2026-02-24 08:03:44 (9424): Guest Log: 2026-02-24 13:03:42,769 [wrapper] Pilot exit status: 0
2026-02-24 08:03:44 (9424): Guest Log: 2026-02-24 13:03:42,832 [wrapper] pandaids: 7017710904
2026-02-24 08:03:44 (9424): Guest Log: 2026-02-24 13:03:42,865 [wrapper] cleanup supervisor_pilot 28063 5973
2026-02-24 08:03:44 (9424): Guest Log: 2026-02-24 13:03:42,873 [wrapper] Test setup, not cleaning
2026-02-24 08:03:44 (9424): Guest Log: 2026-02-24 13:03:42,880 [wrapper] apfmon messages muted
2026-02-24 08:03:44 (9424): Guest Log: 2026-02-24 13:03:42,885 [wrapper] ==== wrapper stdout END ====
2026-02-24 08:03:44 (9424): Guest Log: 2026-02-24 13:03:42,892 [wrapper] ==== wrapper stderr END ====
2026-02-24 08:03:44 (9424): Guest Log:  *** Error codes and diagnostics ***
2026-02-24 08:03:44 (9424): Guest Log:     "exeErrorCode": 0,
2026-02-24 08:03:44 (9424): Guest Log:     "exeErrorDiag": "",
2026-02-24 08:03:44 (9424): Guest Log:     "pilotErrorCode": 0,
2026-02-24 08:03:44 (9424): Guest Log:     "pilotErrorDiag": "",
2026-02-24 08:03:44 (9424): Guest Log:  *** Listing of results directory ***
2026-02-24 08:03:44 (9424): Guest Log: total 186704
2026-02-24 08:03:44 (9424): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 17 03:54 pilot3.tar.gz
2026-02-24 08:03:44 (9424): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 17 03:57 queuedata.json
2026-02-24 08:03:44 (9424): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 17 03:58 runpilot2-wrapper.sh
2026-02-24 08:03:44 (9424): Guest Log: -rwxr-xr-x. 1 atlas atlas      8422 Feb 24 09:06 init_data.xml
2026-02-24 08:03:44 (9424): Guest Log: -rwxr-xr-x. 1 atlas atlas    597959 Feb 24 09:06 input.tar.gz
2026-02-24 08:03:44 (9424): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb 24 09:06 start_atlas.sh
2026-02-24 08:03:44 (9424): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 24 09:06 EVNT.48318032._000323.pool.root.1 -> /data/./ATLAS.root_0
2026-02-24 08:03:44 (9424): Guest Log: -rw-r--r--. 1 atlas atlas      2537 Feb 24 09:06 pandaJob.out
2026-02-24 08:03:44 (9424): Guest Log: -rw-------. 1 atlas atlas    997227 Feb 24 09:07 agis_schedconf.cvmfs.json
2026-02-24 08:03:44 (9424): Guest Log: -rw-------. 1 atlas atlas       429 Feb 24 09:07 workernode_map.json
2026-02-24 08:03:44 (9424): Guest Log: drwx------. 5 atlas atlas      4096 Feb 24 09:07 pilot3
2026-02-24 08:03:44 (9424): Guest Log: -rw-------. 1 atlas atlas 182586827 Feb 24 13:02 HITS.48318034._020023.pool.root.1
2026-02-24 08:03:44 (9424): Guest Log: -rw-------. 1 atlas atlas        95 Feb 24 13:03 pilot_heartbeat.json
2026-02-24 08:03:44 (9424): Guest Log: -rw-------. 1 atlas atlas      1033 Feb 24 13:03 memory_monitor_summary.json
2026-02-24 08:03:44 (9424): Guest Log: -rw-------. 1 atlas atlas   1513015 Feb 24 13:03 agis_ddmendpoints.agis.ALL.json
2026-02-24 08:03:44 (9424): Guest Log: -rw-------. 1 atlas atlas    391197 Feb 24 13:03 log.48318034._020023.job.log.tgz.1
2026-02-24 08:03:44 (9424): Guest Log: -rw-------. 1 atlas atlas      6378 Feb 24 13:03 heartbeat.json
2026-02-24 08:03:44 (9424): Guest Log: -rw-------. 1 atlas atlas      4608 Feb 24 13:03 pilotlog.txt
2026-02-24 08:03:44 (9424): Guest Log: -rw-------. 1 atlas atlas   1979980 Feb 24 13:03 log.48318034._020023.job.log.1
2026-02-24 08:03:44 (9424): Guest Log: -rw-------. 1 atlas atlas       357 Feb 24 13:03 output.list
2026-02-24 08:03:44 (9424): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 24 13:03 runtime_log
2026-02-24 08:03:44 (9424): Guest Log: -rw-------. 1 atlas atlas   2385920 Feb 24 13:03 result.tar.gz
2026-02-24 08:03:44 (9424): Guest Log: -rw-------. 1 atlas atlas       662 Feb 24 13:03 tbvMDmDPRC9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmIStKDmep7jYm.diag
2026-02-24 08:03:44 (9424): Guest Log: -rw-r--r--. 1 atlas atlas      8764 Feb 24 13:03 runtime_log.err
2026-02-24 08:03:44 (9424): Guest Log: Looking for outputfile HITS.48318034._020023.pool.root.1
2026-02-24 08:03:44 (9424): Guest Log: HITS file was successfully produced
2026-02-24 08:03:44 (9424): Guest Log: -rw-------. 1 atlas atlas 182586827 Feb 24 13:02 /home/atlas/RunAtlas/HITS.48318034._020023.pool.root.1
2026-02-24 08:03:45 (9424): Guest Log: Successfully finished the ATLAS job!
2026-02-24 08:03:45 (9424): Guest Log: Copying the results back to the shared directory!
2026-02-24 08:03:45 (9424): Guest Log:  *** Contents of shared directory: ***
2026-02-24 08:03:45 (9424): Guest Log: total 666708
2026-02-24 08:03:45 (9424): Guest Log: -rwxrwxrwx. 1 root root 497104805 Feb 24 09:05 ATLAS.root_0
2026-02-24 08:03:45 (9424): Guest Log: -rwxrwxrwx. 1 root root 182586827 Feb 24 13:03 HITS.pool.root.1
2026-02-24 08:03:45 (9424): Guest Log: -rwxrwxrwx. 1 root root      8422 Feb 24 09:05 init_data.xml
2026-02-24 08:03:45 (9424): Guest Log: -rwxrwxrwx. 1 root root    597959 Feb 17 10:19 input.tar.gz
2026-02-24 08:03:45 (9424): Guest Log: -rwxrwxrwx. 1 root root   2385920 Feb 24 13:03 result.tar.gz
2026-02-24 08:03:45 (9424): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb 17 10:19 start_atlas.sh
2026-02-24 08:03:45 (9424): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-24 08:03:45 (9424): VM Completion File Detected.
2026-02-24 08:03:45 (9424): Powering off VM.
2026-02-24 08:03:45 (9424): Successfully stopped VM.
2026-02-24 08:03:45 (9424): Deregistering VM. (boinc_9ba040d13e25ec02, slot#4)
2026-02-24 08:03:45 (9424): Removing network bandwidth throttle group from VM.
2026-02-24 08:03:45 (9424): Removing VM from VirtualBox.
2026-02-24 08:03:51 (9424): called boinc_finish(0)

</stderr_txt>
]]>

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