Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:38:45 (2735179): wrapper (7.7.26015): starting
20:38:45 (2735179): wrapper: running run_atlas (--nthreads 3)
[2026-02-17 20:38:45] Arguments: --nthreads 3
[2026-02-17 20:38:45] Threads: 3
[2026-02-17 20:38:45] Checking for CVMFS
[2026-02-17 20:38:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-17 20:38:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-17 20:38:46] Running cvmfs_config stat atlas.cern.ch
[2026-02-17 20:38:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-17 20:38:46] 2.9.2.0 2160684 4227 87456 156336 0 50 20944504 36864001 0 130560 0 1534680 99.984 130863 14933 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-17 20:38:46] CVMFS is ok
[2026-02-17 20:38:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-17 20:38:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-17 20:38:46] Further information can be found at the LHC@home message board.
[2026-02-17 20:38:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-17 20:38:46] Checking for apptainer binary...
[2026-02-17 20:38:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-17 20:38:46] Running /usr/bin/apptainer --version
[2026-02-17 20:38:46] apptainer version 1.4.1-1.1
[2026-02-17 20:38:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-17 20:38:46] thA305
[2026-02-17 20:38:46] apptainer works
[2026-02-17 20:38:46] Set ATHENA_PROC_NUMBER=3
[2026-02-17 20:38:46] Set ATHENA_CORE_NUMBER=3
[2026-02-17 20:38:46] Starting ATLAS job with PandaID=7017439047
[2026-02-17 20:38:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-17 22:34:14]  *** The last 200 lines of the pilot log: ***
[2026-02-17 22:34:14] 2026-02-17 21:33:42,950 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-17 22:34:14] 2026-02-17 21:33:42,950 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-17 22:34:14] 2026-02-17 21:33:42,950 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-17 22:34:14] 2026-02-17 21:33:42,950 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-17 22:34:14] 2026-02-17 21:33:42,950 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-17 22:34:14] 2026-02-17 21:33:42,950 | INFO     | job 7017439047 has completed (purged errors)
[2026-02-17 22:34:14] 2026-02-17 21:33:42,950 | INFO     | overall cleanup function is called
[2026-02-17 22:34:14] 2026-02-17 21:33:43,956 | INFO     | --- collectZombieJob: --- 10, [2743645]
[2026-02-17 22:34:14] 2026-02-17 21:33:43,957 | INFO     | zombie collector waiting for pid 2743645
[2026-02-17 22:34:14] 2026-02-17 21:33:43,957 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-17 22:34:14] 2026-02-17 21:33:43,957 | INFO     | collected zombie processes
[2026-02-17 22:34:14] 2026-02-17 21:33:43,957 | INFO     | will attempt to kill all subprocesses of pid=2743645
[2026-02-17 22:34:14] 2026-02-17 21:33:44,005 | INFO     | process IDs to be killed: [2743645] (in reverse order)
[2026-02-17 22:34:14] 2026-02-17 21:33:44,031 | WARNING  | found no corresponding commands to process id(s)
[2026-02-17 22:34:14] 2026-02-17 21:33:44,031 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-17 22:34:14] 2026-02-17 21:33:44,033 | INFO     | did not find any defunct processes belonging to 2743645
[2026-02-17 22:34:14] 2026-02-17 21:33:44,034 | INFO     | did not find any defunct processes belonging to 2743645
[2026-02-17 22:34:14] 2026-02-17 21:33:44,034 | INFO     | ready for new job
[2026-02-17 22:34:14] 2026-02-17 21:33:44,034 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-17 22:34:14] 2026-02-17 21:33:44,035 | INFO     | **************************************
[2026-02-17 22:34:14] 2026-02-17 21:33:44,035 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-17 22:34:14] 2026-02-17 21:33:44,035 | INFO     | **************************************
[2026-02-17 22:34:14] 2026-02-17 21:33:44,035 | INFO     | 
[2026-02-17 22:34:14] 2026-02-17 21:33:44,035 | INFO     | architecture information:
[2026-02-17 22:34:14] 2026-02-17 21:33:44,035 | INFO     | executing command: cat /etc/os-release
[2026-02-17 22:34:14] 2026-02-17 21:33:44,044 | INFO     | cat /etc/os-release:
[2026-02-17 22:34:14] NAME="CentOS Linux"
[2026-02-17 22:34:14] VERSION="7 (Core)"
[2026-02-17 22:34:14] ID="centos"
[2026-02-17 22:34:14] ID_LIKE="rhel fedora"
[2026-02-17 22:34:14] VERSION_ID="7"
[2026-02-17 22:34:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-17 22:34:14] ANSI_COLOR="0;31"
[2026-02-17 22:34:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-17 22:34:14] HOME_URL="https://www.centos.org/"
[2026-02-17 22:34:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-17 22:34:14] 
[2026-02-17 22:34:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-17 22:34:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-17 22:34:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-17 22:34:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-17 22:34:14] 
[2026-02-17 22:34:14] 2026-02-17 21:33:44,044 | INFO     | **************************************
[2026-02-17 22:34:14] 2026-02-17 21:33:44,546 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-17 22:34:14] 2026-02-17 21:33:44,557 | INFO     | sufficient remaining disk space (235375951872 B)
[2026-02-17 22:34:14] 2026-02-17 21:33:44,557 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-17 22:34:14] 2026-02-17 21:33:44,557 | INFO     | current server update state: UPDATING_FINAL
[2026-02-17 22:34:14] 2026-02-17 21:33:44,558 | INFO     | update_server=False
[2026-02-17 22:34:14] 2026-02-17 21:33:44,558 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-17 22:34:14] 2026-02-17 21:33:44,558 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-17 22:34:14] 2026-02-17 21:33:44,558 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-17 22:34:14] 2026-02-17 21:33:44,558 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-17 22:34:14] 2026-02-17 21:33:44,558 | INFO     | aborting loop
[2026-02-17 22:34:14] 2026-02-17 21:33:44,571 | INFO     | all payload control threads have been joined
[2026-02-17 22:34:14] 2026-02-17 21:33:44,830 | INFO     | all data control threads have been joined
[2026-02-17 22:34:14] 2026-02-17 21:33:44,858 | INFO     | all job control threads have been joined
[2026-02-17 22:34:14] 2026-02-17 21:33:45,563 | INFO     | [job] retrieve thread has finished
[2026-02-17 22:34:14] 2026-02-17 21:33:45,564 | INFO     | [job] queue monitor thread has finished
[2026-02-17 22:34:14] 2026-02-17 21:33:45,564 | INFO     | [job] job monitor thread has finished
[2026-02-17 22:34:14] 2026-02-17 21:33:45,576 | INFO     | [payload] control thread has finished
[2026-02-17 22:34:14] 2026-02-17 21:33:45,836 | INFO     | [data] control thread has finished
[2026-02-17 22:34:14] 2026-02-17 21:33:45,863 | INFO     | [job] control thread has finished
[2026-02-17 22:34:14] 2026-02-17 21:33:45,881 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-17 22:34:14] 2026-02-17 21:33:46,004 | INFO     | [payload] execute_payloads thread has finished
[2026-02-17 22:34:14] 2026-02-17 21:33:46,063 | INFO     | [job] create_data_payload thread has finished
[2026-02-17 22:34:14] 2026-02-17 21:33:46,070 | INFO     | [job] validate thread has finished
[2026-02-17 22:34:14] 2026-02-17 21:33:46,154 | INFO     | [payload] validate_pre thread has finished
[2026-02-17 22:34:14] 2026-02-17 21:33:46,213 | INFO     | [data] copytool_in thread has finished
[2026-02-17 22:34:14] 2026-02-17 21:33:46,292 | INFO     | [payload] failed_post thread has finished
[2026-02-17 22:34:14] 2026-02-17 21:33:46,788 | INFO     | [payload] validate_post thread has finished
[2026-02-17 22:34:14] 2026-02-17 21:33:47,886 | INFO     | [data] copytool_out thread has finished
[2026-02-17 22:34:14] 2026-02-17 21:33:48,112 | INFO     | job.realtimelogging is not enabled
[2026-02-17 22:34:14] 2026-02-17 21:33:48,563 | INFO     | [data] queue_monitor thread has finished
[2026-02-17 22:34:14] 2026-02-17 21:33:49,114 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-17 22:34:14] 2026-02-17 21:34:05,264 | INFO     | [monitor] cgroup control has ended
[2026-02-17 22:34:14] 2026-02-17 21:34:06,855 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140071613781824)>', '<ExcThread(monitor, started 140070887614208)>']
[2026-02-17 22:34:14] 2026-02-17 21:34:11,880 | INFO     | all workflow threads have been joined
[2026-02-17 22:34:14] 2026-02-17 21:34:11,880 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-17 22:34:14] 2026-02-17 21:34:11,881 | INFO     | traces error code: 0
[2026-02-17 22:34:14] 2026-02-17 21:34:11,881 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-17 22:34:14] 2026-02-17 21:34:14,672 | INFO     | PID=2739221 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-17 22:34:14] 2026-02-17 21:34:14,672 | INFO     | found 0 job(s) in 20 queues
[2026-02-17 22:34:14] 2026-02-17 21:34:14,672 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-17 22:34:14] 2026-02-17 21:34:14,672 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-17 22:34:14] 2026-02-17 21:34:14,672 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-17 22:34:14] 2026-02-17 21:34:14,672 | INFO     | [monitor] control thread has ended
[2026-02-17 22:34:14] 2026-02-17 21:34:14,718 [wrapper] ==== pilot stdout END ====
[2026-02-17 22:34:14] 2026-02-17 21:34:14,721 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-17 22:34:14] 2026-02-17 21:34:14,723 [wrapper] pilotpid: 2739221
[2026-02-17 22:34:14] 2026-02-17 21:34:14,725 [wrapper] Pilot exit status: 0
[2026-02-17 22:34:14] 2026-02-17 21:34:14,732 [wrapper] pandaids: 7017439047
[2026-02-17 22:34:14] 2026-02-17 21:34:14,750 [wrapper] cleanup supervisor_pilot 2750676 2739222
[2026-02-17 22:34:14] 2026-02-17 21:34:14,752 [wrapper] Test setup, not cleaning
[2026-02-17 22:34:14] 2026-02-17 21:34:14,754 [wrapper] apfmon messages muted
[2026-02-17 22:34:14] 2026-02-17 21:34:14,757 [wrapper] ==== wrapper stdout END ====
[2026-02-17 22:34:14] 2026-02-17 21:34:14,759 [wrapper] ==== wrapper stderr END ====
[2026-02-17 22:34:14]  *** Error codes and diagnostics ***
[2026-02-17 22:34:14]     "exeErrorCode": 0,
[2026-02-17 22:34:14]     "exeErrorDiag": "",
[2026-02-17 22:34:14]     "pilotErrorCode": 0,
[2026-02-17 22:34:14]     "pilotErrorDiag": "",
[2026-02-17 22:34:14]  *** Listing of results directory ***
[2026-02-17 22:34:14] total 457120
[2026-02-17 22:34:14] -rw-r--r-- 1 boinc boinc    584627 Feb 16 19:05 pilot3.tar.gz
[2026-02-17 22:34:14] -rwx------ 1 boinc boinc     36322 Feb 16 19:09 runpilot2-wrapper.sh
[2026-02-17 22:34:14] -rw-r--r-- 1 boinc boinc      5111 Feb 16 19:12 queuedata.json
[2026-02-17 22:34:14] -rw-r--r-- 1 boinc boinc       100 Feb 17 20:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-17 22:34:14] -rwxr-xr-x 1 boinc boinc      7986 Feb 17 20:38 run_atlas
[2026-02-17 22:34:14] -rw-r--r-- 1 boinc boinc       105 Feb 17 20:38 job.xml
[2026-02-17 22:34:14] -rw-r--r-- 2 boinc boinc 275068550 Feb 17 20:38 EVNT.48610891._000006.pool.root.1
[2026-02-17 22:34:14] -rw-r--r-- 2 boinc boinc    597986 Feb 17 20:38 input.tar.gz
[2026-02-17 22:34:14] -rw-r--r-- 2 boinc boinc     15845 Feb 17 20:38 start_atlas.sh
[2026-02-17 22:34:14] drwxrwx--x 2 boinc boinc      4096 Feb 17 20:38 shared
[2026-02-17 22:34:14] -rw-r--r-- 1 boinc boinc         0 Feb 17 20:38 boinc_setup_complete
[2026-02-17 22:34:14] -rw-r--r-- 1 boinc boinc      6439 Feb 17 20:38 init_data.xml
[2026-02-17 22:34:14] -rw-r--r-- 1 boinc boinc         0 Feb 17 20:38 boinc_lockfile
[2026-02-17 22:34:14] -rw-r--r-- 1 boinc boinc      2636 Feb 17 20:38 pandaJob.out
[2026-02-17 22:34:14] -rw------- 1 boinc boinc    999372 Feb 17 20:38 agis_schedconf.cvmfs.json
[2026-02-17 22:34:14] -rw------- 1 boinc boinc   1513015 Feb 17 20:38 agis_ddmendpoints.agis.ALL.json
[2026-02-17 22:34:14] -rw------- 1 boinc boinc       426 Feb 17 20:38 workernode_map.json
[2026-02-17 22:34:14] drwx------ 5 boinc boinc      4096 Feb 17 20:38 pilot3
[2026-02-17 22:34:14] -rw------- 1 boinc boinc 186542457 Feb 17 22:33 HITS.48610894._001579.pool.root.1
[2026-02-17 22:34:14] -rw-r--r-- 1 boinc boinc       529 Feb 17 22:33 boinc_task_state.xml
[2026-02-17 22:34:14] -rw------- 1 boinc boinc        95 Feb 17 22:33 pilot_heartbeat.json
[2026-02-17 22:34:14] -rw------- 1 boinc boinc      1025 Feb 17 22:33 memory_monitor_summary.json
[2026-02-17 22:34:14] -rw------- 1 boinc boinc    291645 Feb 17 22:33 log.48610894._001579.job.log.tgz.1
[2026-02-17 22:34:14] -rw------- 1 boinc boinc      6303 Feb 17 22:33 heartbeat.json
[2026-02-17 22:34:14] -rw-r--r-- 1 boinc boinc      8192 Feb 17 22:33 boinc_mmap_file
[2026-02-17 22:34:14] -rw-r--r-- 1 boinc boinc        27 Feb 17 22:33 wrapper_checkpoint.txt
[2026-02-17 22:34:14] -rw------- 1 boinc boinc       747 Feb 17 22:34 pilotlog.txt
[2026-02-17 22:34:14] -rw------- 1 boinc boinc    990626 Feb 17 22:34 log.48610894._001579.job.log.1
[2026-02-17 22:34:14] -rw------- 1 boinc boinc       357 Feb 17 22:34 output.list
[2026-02-17 22:34:14] -rw-r--r-- 1 boinc boinc       620 Feb 17 22:34 runtime_log
[2026-02-17 22:34:14] -rw------- 1 boinc boinc   1300480 Feb 17 22:34 result.tar.gz
[2026-02-17 22:34:14] -rw-r--r-- 1 boinc boinc      8896 Feb 17 22:34 runtime_log.err
[2026-02-17 22:34:14] -rw------- 1 boinc boinc       657 Feb 17 22:34 WLyKDmKDIC9n9Rq4apOajLDm4fhM0noT9bVooX4SDmzZrKDmdESi3n.diag
[2026-02-17 22:34:14] -rw-r--r-- 1 boinc boinc     11407 Feb 17 22:34 stderr.txt
[2026-02-17 22:34:14] HITS file was successfully produced:
[2026-02-17 22:34:14] -rw------- 1 boinc boinc 186542457 Feb 17 22:33 shared/HITS.pool.root.1
[2026-02-17 22:34:14]  *** Contents of shared directory: ***
[2026-02-17 22:34:14] total 452676
[2026-02-17 22:34:14] -rw-r--r-- 2 boinc boinc 275068550 Feb 17 20:38 ATLAS.root_0
[2026-02-17 22:34:14] -rw-r--r-- 2 boinc boinc    597986 Feb 17 20:38 input.tar.gz
[2026-02-17 22:34:14] -rw-r--r-- 2 boinc boinc     15845 Feb 17 20:38 start_atlas.sh
[2026-02-17 22:34:14] -rw------- 1 boinc boinc 186542457 Feb 17 22:33 HITS.pool.root.1
[2026-02-17 22:34:14] -rw------- 1 boinc boinc   1300480 Feb 17 22:34 result.tar.gz
22:34:15 (2735179): run_atlas exited; CPU time 19979.788040
22:34:15 (2735179): called boinc_finish(0)

</stderr_txt>
]]>

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