Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
01:35:07 (3966): wrapper (7.7.26015): starting
01:35:07 (3966): wrapper: running run_atlas (--nthreads 4)
[2026-02-17 01:35:07] Arguments: --nthreads 4
[2026-02-17 01:35:07] Threads: 4
[2026-02-17 01:35:07] Checking for CVMFS
[2026-02-17 01:35:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-17 01:35:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-17 01:35:26] Running cvmfs_config stat atlas.cern.ch
[2026-02-17 01:35:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-17 01:35:27] 2.11.5.0 4174 0 25608 156304 3 1 2801625 4096000 0 130560 0 0 0.000 1336 1936 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2026-02-17 01:35:27] CVMFS is ok
[2026-02-17 01:35:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-17 01:35:27] Checking for apptainer binary...
[2026-02-17 01:35:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-17 01:35:27] Running /usr/bin/apptainer --version
[2026-02-17 01:35:27] apptainer version 1.0.3
[2026-02-17 01:35:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-17 01:35:28] TeeC28
[2026-02-17 01:35:28] apptainer works
[2026-02-17 01:35:28] Set ATHENA_PROC_NUMBER=4
[2026-02-17 01:35:28] Set ATHENA_CORE_NUMBER=4
[2026-02-17 01:35:29] Starting ATLAS job with PandaID=7017438960
[2026-02-17 01:35:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/users/jmp/BOINC/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-17 07:01:49]  *** The last 200 lines of the pilot log: ***
[2026-02-17 07:01:49] 2026-02-17 07:00:41,114 | INFO     | monitor loop #1478: job 0:7017438960 is in state 'finished'
[2026-02-17 07:01:49] 2026-02-17 07:00:41,114 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-17 07:01:49] 2026-02-17 07:00:41,348 | INFO     | time since job start (19471s) is within the limit (349056.0s)
[2026-02-17 07:01:49] 2026-02-17 07:00:42,598 | INFO     | job 7017438960 has state=finished
[2026-02-17 07:01:49] 2026-02-17 07:00:42,599 | INFO     | preparing for final server update for job 7017438960 in state='finished'
[2026-02-17 07:01:49] 2026-02-17 07:00:42,599 | INFO     | reading metadata from: /home/m/users/jmp/BOINC/slots/3/PanDA_Pilot-7017438960/jobReport.json
[2026-02-17 07:01:49] 2026-02-17 07:00:42,605 | INFO     | added worker_node to metadata from /home/m/users/jmp/BOINC/slots/3/workernode_map.json
[2026-02-17 07:01:49] 2026-02-17 07:00:42,605 | INFO     | this job has now completed (state=finished)
[2026-02-17 07:01:49] 2026-02-17 07:00:42,605 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-17 07:01:49] 2026-02-17 07:00:42,605 | INFO     | log transfer has been attempted: DONE
[2026-02-17 07:01:49] 2026-02-17 07:00:42,605 | INFO     | job 7017438960 has finished - writing final server update
[2026-02-17 07:01:49] 2026-02-17 07:00:42,606 | INFO     | total number of processed events: 400 (read)
[2026-02-17 07:01:49] 2026-02-17 07:00:42,626 | INFO     | using path: /home/m/users/jmp/BOINC/slots/3/PanDA_Pilot-7017438960/memory_monitor_summary.json (trf name=prmon)
[2026-02-17 07:01:49] 2026-02-17 07:00:42,627 | INFO     | extracted standard info from prmon json
[2026-02-17 07:01:49] 2026-02-17 07:00:42,627 | INFO     | extracted standard memory fields from prmon json
[2026-02-17 07:01:49] 2026-02-17 07:00:42,627 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-17 07:01:49] 2026-02-17 07:00:42,628 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-17 07:01:49] 2026-02-17 07:00:42,628 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-17 07:01:49] 2026-02-17 07:00:42,645 | INFO     | fitting pss+swap vs Time
[2026-02-17 07:01:49] 2026-02-17 07:00:42,647 | INFO     | sum of square deviations: 10065751520.0
[2026-02-17 07:01:49] 2026-02-17 07:00:42,660 | INFO     | sum of deviations: -95585772923.99991
[2026-02-17 07:01:49] 2026-02-17 07:00:42,660 | INFO     | mean x: 1771301894.0
[2026-02-17 07:01:49] 2026-02-17 07:00:42,660 | INFO     | mean y: 2387590.9028213164
[2026-02-17 07:01:49] 2026-02-17 07:00:42,660 | INFO     | intersect: 16822916121.07013
[2026-02-17 07:01:49] 2026-02-17 07:00:42,661 | INFO     | chi2: 2.6386959837410933
[2026-02-17 07:01:49] 2026-02-17 07:00:42,662 | INFO     | sum of square deviations: 9599817202.5
[2026-02-17 07:01:49] 2026-02-17 07:00:42,669 | INFO     | sum of deviations: -75565298302.0
[2026-02-17 07:01:49] 2026-02-17 07:00:42,669 | INFO     | mean x: 1771301741.5
[2026-02-17 07:01:49] 2026-02-17 07:00:42,670 | INFO     | mean y: 2394066.6751592355
[2026-02-17 07:01:49] 2026-02-17 07:00:42,670 | INFO     | intersect: 13945257941.670866
[2026-02-17 07:01:49] 2026-02-17 07:00:42,670 | INFO     | chi2: 1.980992630650352
[2026-02-17 07:01:49] 2026-02-17 07:00:42,671 | INFO     | current chi2=1.980992630650352 (change=24.92531754864241 %)
[2026-02-17 07:01:49] 2026-02-17 07:00:42,671 | INFO     | right removable region: 313
[2026-02-17 07:01:49] 2026-02-17 07:00:42,671 | INFO     | sum of square deviations: 9599817202.5
[2026-02-17 07:01:49] 2026-02-17 07:00:42,677 | INFO     | sum of deviations: -132130299097.00005
[2026-02-17 07:01:49] 2026-02-17 07:00:42,677 | INFO     | mean x: 1771302046.5
[2026-02-17 07:01:49] 2026-02-17 07:00:42,677 | INFO     | mean y: 2399426.796178344
[2026-02-17 07:01:49] 2026-02-17 07:00:42,677 | INFO     | intersect: 24382308362.377106
[2026-02-17 07:01:49] 2026-02-17 07:00:42,677 | INFO     | chi2: 1.3056542872864259
[2026-02-17 07:01:49] 2026-02-17 07:00:42,678 | INFO     | current chi2=1.3056542872864259 (change=50.51895726785115 %)
[2026-02-17 07:01:49] 2026-02-17 07:00:42,678 | INFO     | sum of square deviations: 9148487810.0
[2026-02-17 07:01:49] 2026-02-17 07:00:42,683 | INFO     | sum of deviations: -119438705221.00002
[2026-02-17 07:01:49] 2026-02-17 07:00:42,683 | INFO     | mean x: 1771302199.0
[2026-02-17 07:01:49] 2026-02-17 07:00:42,683 | INFO     | mean y: 2395130.236245955
[2026-02-17 07:01:49] 2026-02-17 07:00:42,683 | INFO     | intersect: 23127751538.583485
[2026-02-17 07:01:49] 2026-02-17 07:00:42,683 | INFO     | chi2: 1.286644035745659
[2026-02-17 07:01:49] 2026-02-17 07:00:42,684 | INFO     | current chi2=1.286644035745659 (change=1.4559942647817086 %)
[2026-02-17 07:01:49] 2026-02-17 07:00:42,684 | INFO     | left removable region: 20
[2026-02-17 07:01:49] 2026-02-17 07:00:42,684 | INFO     | sum of square deviations: 7799669962.0
[2026-02-17 07:01:49] 2026-02-17 07:00:42,688 | INFO     | sum of deviations: -67144079637.000015
[2026-02-17 07:01:49] 2026-02-17 07:00:42,688 | INFO     | mean x: 1771302321.0
[2026-02-17 07:01:49] 2026-02-17 07:00:42,688 | INFO     | mean y: 2390143.9658703073
[2026-02-17 07:01:49] 2026-02-17 07:00:42,688 | INFO     | intersect: 15250787150.745136
[2026-02-17 07:01:49] 2026-02-17 07:00:42,689 | INFO     | chi2: 0.5119366514026892
[2026-02-17 07:01:49] 2026-02-17 07:00:42,689 | INFO     | current memory leak: -8.61 B/s (using 293 data points, chi2=0.51)
[2026-02-17 07:01:49] 2026-02-17 07:00:42,690 | INFO     | could have reported an average CPU frequency of 2699 MHz (14 samples)
[2026-02-17 07:01:49] 2026-02-17 07:00:42,690 | INFO     | ..............................
[2026-02-17 07:01:49] 2026-02-17 07:00:42,690 | INFO     | . Timing measurements:
[2026-02-17 07:01:49] 2026-02-17 07:00:42,690 | INFO     | . get job = 0 s
[2026-02-17 07:01:49] 2026-02-17 07:00:42,690 | INFO     | . initial setup = 7 s
[2026-02-17 07:01:49] 2026-02-17 07:00:42,690 | INFO     | . payload setup = 7 s
[2026-02-17 07:01:49] 2026-02-17 07:00:42,690 | INFO     | . stage-in = 0 s
[2026-02-17 07:01:49] 2026-02-17 07:00:42,690 | INFO     | . payload execution = 19409 s
[2026-02-17 07:01:49] 2026-02-17 07:00:42,690 | INFO     | . stage-out = 35 s
[2026-02-17 07:01:49] 2026-02-17 07:00:42,690 | INFO     | . log creation = 0 s
[2026-02-17 07:01:49] 2026-02-17 07:00:42,690 | INFO     | ..............................
[2026-02-17 07:01:49] 2026-02-17 07:00:42,788 | INFO     | 
[2026-02-17 07:01:49] 2026-02-17 07:00:42,788 | INFO     | job summary report
[2026-02-17 07:01:49] 2026-02-17 07:00:42,788 | INFO     | --------------------------------------------------
[2026-02-17 07:01:49] 2026-02-17 07:00:42,788 | INFO     | PanDA job id: 7017438960
[2026-02-17 07:01:49] 2026-02-17 07:00:42,788 | INFO     | task id: 48610894
[2026-02-17 07:01:49] 2026-02-17 07:00:42,788 | INFO     | errors: (none)
[2026-02-17 07:01:49] 2026-02-17 07:00:42,788 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-17 07:01:49] 2026-02-17 07:00:42,789 | INFO     | pilot state: finished 
[2026-02-17 07:01:49] 2026-02-17 07:00:42,789 | INFO     | transexitcode: 0
[2026-02-17 07:01:49] 2026-02-17 07:00:42,789 | INFO     | exeerrorcode: 0
[2026-02-17 07:01:49] 2026-02-17 07:00:42,789 | INFO     | exeerrordiag: 
[2026-02-17 07:01:49] 2026-02-17 07:00:42,789 | INFO     | exitcode: 0
[2026-02-17 07:01:49] 2026-02-17 07:00:42,789 | INFO     | exitmsg: OK
[2026-02-17 07:01:49] 2026-02-17 07:00:42,789 | INFO     | cpuconsumptiontime: 55885 s
[2026-02-17 07:01:49] 2026-02-17 07:00:42,789 | INFO     | nevents: 400
[2026-02-17 07:01:49] 2026-02-17 07:00:42,789 | INFO     | neventsw: 0
[2026-02-17 07:01:49] 2026-02-17 07:00:42,789 | INFO     | pid: 12603
[2026-02-17 07:01:49] 2026-02-17 07:00:42,789 | INFO     | pgrp: 12603
[2026-02-17 07:01:49] 2026-02-17 07:00:42,789 | INFO     | corecount: 4
[2026-02-17 07:01:49] 2026-02-17 07:00:42,789 | INFO     | event service: False
[2026-02-17 07:01:49] 2026-02-17 07:00:42,790 | INFO     | sizes: {0: 2281862, 1: 2282323, 11: 2282323, 19421: 2315445, 19456: 2324461, 19460: 2324517, 19462: 2324839}
[2026-02-17 07:01:49] 2026-02-17 07:00:42,790 | INFO     | --------------------------------------------------
[2026-02-17 07:01:49] 2026-02-17 07:00:42,790 | INFO     | 
[2026-02-17 07:01:49] 2026-02-17 07:00:42,790 | INFO     | executing command: ls -lF /home/m/users/jmp/BOINC/slots/3
[2026-02-17 07:01:49] 2026-02-17 07:00:42,800 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-17 07:01:49] 2026-02-17 07:00:42,800 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-17 07:01:49] 2026-02-17 07:00:42,800 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-17 07:01:49] 2026-02-17 07:00:42,800 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-17 07:01:49] 2026-02-17 07:00:42,800 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-17 07:01:49] 2026-02-17 07:00:42,800 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-17 07:01:49] 2026-02-17 07:00:42,800 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-17 07:01:49] 2026-02-17 07:00:42,800 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-17 07:01:49] 2026-02-17 07:00:42,801 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-17 07:01:49] 2026-02-17 07:00:42,801 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-17 07:01:49] 2026-02-17 07:00:42,801 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-17 07:01:49] 2026-02-17 07:00:42,801 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-17 07:01:49] 2026-02-17 07:00:42,801 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-17 07:01:49] 2026-02-17 07:00:42,801 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-17 07:01:49] 2026-02-17 07:00:42,801 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-17 07:01:49] 2026-02-17 07:00:42,801 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-17 07:01:49] 2026-02-17 07:00:42,801 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-17 07:01:49] 2026-02-17 07:00:42,801 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-17 07:01:49] 2026-02-17 07:00:42,801 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-17 07:01:49] 2026-02-17 07:00:42,801 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-17 07:01:49] 2026-02-17 07:00:42,802 | INFO     | job 7017438960 has completed (purged errors)
[2026-02-17 07:01:49] 2026-02-17 07:00:42,802 | INFO     | overall cleanup function is called
[2026-02-17 07:01:49] 2026-02-17 07:00:43,808 | INFO     | --- collectZombieJob: --- 10, [12603]
[2026-02-17 07:01:49] 2026-02-17 07:00:43,810 | INFO     | zombie collector waiting for pid 12603
[2026-02-17 07:01:49] 2026-02-17 07:00:43,810 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-17 07:01:49] 2026-02-17 07:00:43,810 | INFO     | collected zombie processes
[2026-02-17 07:01:49] 2026-02-17 07:00:43,811 | INFO     | will attempt to kill all subprocesses of pid=12603
[2026-02-17 07:01:49] 2026-02-17 07:00:43,905 | INFO     | process IDs to be killed: [12603] (in reverse order)
[2026-02-17 07:01:49] 2026-02-17 07:00:43,929 | WARNING  | found no corresponding commands to process id(s)
[2026-02-17 07:01:49] 2026-02-17 07:00:43,929 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-17 07:01:49] 2026-02-17 07:00:43,931 | INFO     | did not find any defunct processes belonging to 12603
[2026-02-17 07:01:49] 2026-02-17 07:00:43,933 | INFO     | did not find any defunct processes belonging to 12603
[2026-02-17 07:01:49] 2026-02-17 07:00:43,933 | INFO     | ready for new job
[2026-02-17 07:01:49] 2026-02-17 07:00:43,933 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-17 07:01:49] 2026-02-17 07:00:43,934 | INFO     | **************************************
[2026-02-17 07:01:49] 2026-02-17 07:00:43,934 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-17 07:01:49] 2026-02-17 07:00:43,934 | INFO     | **************************************
[2026-02-17 07:01:49] 2026-02-17 07:00:43,934 | INFO     | 
[2026-02-17 07:01:49] 2026-02-17 07:00:43,953 | INFO     | architecture information:
[2026-02-17 07:01:49] 2026-02-17 07:00:43,953 | INFO     | executing command: cat /etc/os-release
[2026-02-17 07:01:49] 2026-02-17 07:00:43,964 | INFO     | cat /etc/os-release:
[2026-02-17 07:01:49] NAME="CentOS Linux"
[2026-02-17 07:01:49] VERSION="7 (Core)"
[2026-02-17 07:01:49] ID="centos"
[2026-02-17 07:01:49] ID_LIKE="rhel fedora"
[2026-02-17 07:01:49] VERSION_ID="7"
[2026-02-17 07:01:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-17 07:01:49] ANSI_COLOR="0;31"
[2026-02-17 07:01:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-17 07:01:49] HOME_URL="https://www.centos.org/"
[2026-02-17 07:01:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-17 07:01:49] 
[2026-02-17 07:01:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-17 07:01:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-17 07:01:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-17 07:01:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-17 07:01:49] 
[2026-02-17 07:01:49] 2026-02-17 07:00:43,965 | INFO     | **************************************
[2026-02-17 07:01:49] 2026-02-17 07:00:44,469 | INFO     | executing command: df -mP /home/m/users/jmp/BOINC/slots/3
[2026-02-17 07:01:49] 2026-02-17 07:00:44,479 | INFO     | sufficient remaining disk space (413826809856 B)
[2026-02-17 07:01:49] 2026-02-17 07:00:44,480 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-17 07:01:49] 2026-02-17 07:00:44,480 | INFO     | current server update state: UPDATING_FINAL
[2026-02-17 07:01:49] 2026-02-17 07:00:44,480 | INFO     | update_server=False
[2026-02-17 07:01:49] 2026-02-17 07:00:44,480 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-17 07:01:49] 2026-02-17 07:00:44,480 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-17 07:01:49] 2026-02-17 07:00:44,621 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-17 07:01:49] 2026-02-17 07:00:44,622 | INFO     | aborting loop
[2026-02-17 07:01:49] 2026-02-17 07:00:45,287 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-17 07:01:49] 2026-02-17 07:00:45,324 | INFO     | all data control threads have been joined
[2026-02-17 07:01:49] 2026-02-17 07:00:45,486 | INFO     | [job] retrieve thread has finished
[2026-02-17 07:01:49] 2026-02-17 07:00:45,487 | INFO     | [job] queue monitor thread has finished
[2026-02-17 07:01:49] 2026-02-17 07:00:45,512 | INFO     | all payload control threads have been joined
[2026-02-17 07:01:49] 2026-02-17 07:00:45,608 | INFO     | all job control threads have been joined
[2026-02-17 07:01:49] 2026-02-17 07:00:45,626 | INFO     | [job] job monitor thread has finished
[2026-02-17 07:01:49] 2026-02-17 07:00:45,654 | INFO     | [payload] validate_pre thread has finished
[2026-02-17 07:01:49] 2026-02-17 07:00:45,836 | INFO     | [job] create_data_payload thread has finished
[2026-02-17 07:01:49] 2026-02-17 07:00:45,963 | INFO     | [payload] validate_post thread has finished
[2026-02-17 07:01:49] 2026-02-17 07:00:46,162 | INFO     | [payload] execute_payloads thread has finished
[2026-02-17 07:01:49] 2026-02-17 07:00:46,328 | INFO     | [data] control thread has finished
[2026-02-17 07:01:49] 2026-02-17 07:00:46,359 | INFO     | [data] copytool_in thread has finished
[2026-02-17 07:01:49] 2026-02-17 07:00:46,361 | INFO     | [job] validate thread has finished
[2026-02-17 07:01:49] 2026-02-17 07:00:46,518 | INFO     | [payload] control thread has finished
[2026-02-17 07:01:49] 2026-02-17 07:00:46,583 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-17 07:01:49] 2026-02-17 07:00:46,614 | INFO     | [job] control thread has finished
[2026-02-17 07:01:49] 2026-02-17 07:00:46,620 | INFO     | [payload] failed_post thread has finished
[2026-02-17 07:01:49] 2026-02-17 07:00:46,800 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-17 07:01:49] 2026-02-17 07:00:47,294 | INFO     | [data] copytool_out thread has finished
[2026-02-17 07:01:49] 2026-02-17 07:00:50,585 | INFO     | [data] queue_monitor thread has finished
[2026-02-17 07:01:49] 2026-02-17 07:01:14,503 | INFO     | PID=8221 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-17 07:01:49] 2026-02-17 07:01:14,503 | INFO     | found 0 job(s) in 20 queues
[2026-02-17 07:01:49] 2026-02-17 07:01:14,503 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-17 07:01:49] 2026-02-17 07:01:14,503 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-17 07:01:49] 2026-02-17 07:01:42,483 | INFO     | [monitor] cgroup control has ended
[2026-02-17 07:01:49] 2026-02-17 07:01:44,104 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140145848239936)>', '<ExcThread(monitor, started 140145554601728)>']
[2026-02-17 07:01:49] 2026-02-17 07:01:44,652 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-17 07:01:49] 2026-02-17 07:01:44,653 | INFO     | [monitor] control thread has ended
[2026-02-17 07:01:49] 2026-02-17 07:01:49,128 | INFO     | all workflow threads have been joined
[2026-02-17 07:01:49] 2026-02-17 07:01:49,128 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-17 07:01:49] 2026-02-17 07:01:49,129 | INFO     | traces error code: 0
[2026-02-17 07:01:49] 2026-02-17 07:01:49,130 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-17 07:01:49] 2026-02-17 07:01:49,237 [wrapper] ==== pilot stdout END ====
[2026-02-17 07:01:49] 2026-02-17 07:01:49,240 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-17 07:01:49] 2026-02-17 07:01:49,242 [wrapper] pilotpid: 8221
[2026-02-17 07:01:49] 2026-02-17 07:01:49,244 [wrapper] Pilot exit status: 0
[2026-02-17 07:01:49] 2026-02-17 07:01:49,268 [wrapper] pandaids: 7017438960
[2026-02-17 07:01:49] 2026-02-17 07:01:49,304 [wrapper] cleanup supervisor_pilot 19169 8222
[2026-02-17 07:01:49] 2026-02-17 07:01:49,308 [wrapper] Test setup, not cleaning
[2026-02-17 07:01:49] 2026-02-17 07:01:49,311 [wrapper] apfmon messages muted
[2026-02-17 07:01:49] 2026-02-17 07:01:49,314 [wrapper] ==== wrapper stdout END ====
[2026-02-17 07:01:49] 2026-02-17 07:01:49,317 [wrapper] ==== wrapper stderr END ====
[2026-02-17 07:01:49]  *** Error codes and diagnostics ***
[2026-02-17 07:01:49]     "exeErrorCode": 0,
[2026-02-17 07:01:49]     "exeErrorDiag": "",
[2026-02-17 07:01:49]     "pilotErrorCode": 0,
[2026-02-17 07:01:49]     "pilotErrorDiag": "",
[2026-02-17 07:01:49]  *** Listing of results directory ***
[2026-02-17 07:01:49] total 468364
[2026-02-17 07:01:49] -rw-r--r-- 1 m m    584627 Feb 16 18:05 pilot3.tar.gz
[2026-02-17 07:01:49] -rwx------ 1 m m     36322 Feb 16 18:07 runpilot2-wrapper.sh
[2026-02-17 07:01:49] -rw-r--r-- 1 m m      5111 Feb 16 18:07 queuedata.json
[2026-02-17 07:01:49] -rw-rw-r-- 1 m m       100 Feb 17 01:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-17 07:01:49] -rwxr-xr-x 1 m m      7986 Feb 17 01:35 run_atlas
[2026-02-17 07:01:49] -rw-rw-r-- 1 m m       105 Feb 17 01:35 job.xml
[2026-02-17 07:01:49] -rw-rw-r-- 1 m m      6031 Feb 17 01:35 init_data.xml
[2026-02-17 07:01:49] -rw-r--r-- 2 m m 278920802 Feb 17 01:35 EVNT.48610891._000002.pool.root.1
[2026-02-17 07:01:49] -rw-r--r-- 2 m m     15845 Feb 17 01:35 start_atlas.sh
[2026-02-17 07:01:49] drwxrwx--x 2 m m      4096 Feb 17 01:35 shared
[2026-02-17 07:01:49] -rw-r--r-- 2 m m    597987 Feb 17 01:35 input.tar.gz
[2026-02-17 07:01:49] -rw-rw-r-- 1 m m         0 Feb 17 01:35 boinc_lockfile
[2026-02-17 07:01:49] -rw-rw-r-- 1 m m      2634 Feb 17 01:35 pandaJob.out
[2026-02-17 07:01:49] -rw------- 1 m m   1001145 Feb 17 01:36 agis_schedconf.cvmfs.json
[2026-02-17 07:01:49] -rw------- 1 m m       416 Feb 17 01:36 workernode_map.json
[2026-02-17 07:01:49] drwx------ 5 m m      4096 Feb 17 01:36 pilot3
[2026-02-17 07:01:49] -rw-rw-r-- 1 m m       530 Feb 17 06:59 boinc_task_state.xml
[2026-02-17 07:01:49] -rw------- 1 m m 190370685 Feb 17 06:59 HITS.48610894._001492.pool.root.1
[2026-02-17 07:01:49] -rw------- 1 m m      1029 Feb 17 06:59 memory_monitor_summary.json
[2026-02-17 07:01:49] -rw------- 1 m m        95 Feb 17 07:00 pilot_heartbeat.json
[2026-02-17 07:01:49] -rw------- 1 m m   1513015 Feb 17 07:00 agis_ddmendpoints.agis.ALL.json
[2026-02-17 07:01:49] -rw------- 1 m m    471675 Feb 17 07:00 log.48610894._001492.job.log.tgz.1
[2026-02-17 07:01:49] -rw------- 1 m m      6312 Feb 17 07:00 heartbeat.json
[2026-02-17 07:01:49] -rw-rw-r-- 1 m m      8192 Feb 17 07:01 boinc_mmap_file
[2026-02-17 07:01:49] -rw-rw-r-- 1 m m        28 Feb 17 07:01 wrapper_checkpoint.txt
[2026-02-17 07:01:49] -rw------- 1 m m      4751 Feb 17 07:01 pilotlog.txt
[2026-02-17 07:01:49] -rw------- 1 m m   2718413 Feb 17 07:01 log.48610894._001492.job.log.1
[2026-02-17 07:01:49] -rw------- 1 m m       357 Feb 17 07:01 output.list
[2026-02-17 07:01:49] -rw-rw-r-- 1 m m       620 Feb 17 07:01 runtime_log
[2026-02-17 07:01:49] -rw------- 1 m m   3205120 Feb 17 07:01 result.tar.gz
[2026-02-17 07:01:49] -rw-rw-r-- 1 m m      8889 Feb 17 07:01 runtime_log.err
[2026-02-17 07:01:49] -rw------- 1 m m       645 Feb 17 07:01 ltWKDmKBIC9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm0gsKDmAmjixn.diag
[2026-02-17 07:01:49] -rw-rw-r-- 1 m m     20990 Feb 17 07:01 stderr.txt
[2026-02-17 07:01:49] HITS file was successfully produced:
[2026-02-17 07:01:49] -rw------- 1 m m 190370685 Feb 17 06:59 shared/HITS.pool.root.1
[2026-02-17 07:01:49]  *** Contents of shared directory: ***
[2026-02-17 07:01:49] total 462036
[2026-02-17 07:01:49] -rw-r--r-- 2 m m 278920802 Feb 17 01:35 ATLAS.root_0
[2026-02-17 07:01:49] -rw-r--r-- 2 m m     15845 Feb 17 01:35 start_atlas.sh
[2026-02-17 07:01:49] -rw-r--r-- 2 m m    597987 Feb 17 01:35 input.tar.gz
[2026-02-17 07:01:49] -rw------- 1 m m 190370685 Feb 17 06:59 HITS.pool.root.1
[2026-02-17 07:01:49] -rw------- 1 m m   3205120 Feb 17 07:01 result.tar.gz
07:01:50 (3966): run_atlas exited; CPU time 56109.185369
07:01:50 (3966): called boinc_finish(0)

</stderr_txt>
]]>

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