Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:55:14 (4151779): wrapper (7.7.26015): starting
15:55:14 (4151779): wrapper: running run_atlas (--nthreads 2)
[2026-02-17 15:55:14] Arguments: --nthreads 2
[2026-02-17 15:55:14] Threads: 2
[2026-02-17 15:55:14] Checking for CVMFS
[2026-02-17 15:55:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-17 15:55:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-17 15:55:15] Running cvmfs_config stat atlas.cern.ch
[2026-02-17 15:55:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-17 15:55:15] 2.9.2.0 3848407 3766 58380 156325 0 50 24440289 36864001 0 130560 0 909423 99.978 111759 20104 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-17 15:55:15] CVMFS is ok
[2026-02-17 15:55:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-17 15:55:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-17 15:55:15] Further information can be found at the LHC@home message board.
[2026-02-17 15:55:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-17 15:55:15] Checking for apptainer binary...
[2026-02-17 15:55:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-17 15:55:15] Running /usr/bin/apptainer --version
[2026-02-17 15:55:15] apptainer version 1.4.1-1.1
[2026-02-17 15:55:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-17 15:55:15] thA337
[2026-02-17 15:55:15] apptainer works
[2026-02-17 15:55:15] Set ATHENA_PROC_NUMBER=2
[2026-02-17 15:55:15] Set ATHENA_CORE_NUMBER=2
[2026-02-17 15:55:15] Starting ATLAS job with PandaID=7014648535
[2026-02-17 15:55:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-17 19:00:56]  *** The last 200 lines of the pilot log: ***
[2026-02-17 19:00:56] 2026-02-17 18:00:26,789 | INFO     | all job control threads have been joined
[2026-02-17 19:00:56] 2026-02-17 18:00:27,282 | INFO     | all data control threads have been joined
[2026-02-17 19:00:56] 2026-02-17 18:00:27,342 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-17 19:00:56] 2026-02-17 18:00:27,350 | INFO     | [job] queue monitor thread has finished
[2026-02-17 19:00:56] 2026-02-17 18:00:27,350 | INFO     | [job] retrieve thread has finished
[2026-02-17 19:00:56] 2026-02-17 18:00:27,389 | INFO     | [data] copytool_in thread has finished
[2026-02-17 19:00:56] 2026-02-17 18:00:27,683 | INFO     | [payload] control thread has finished
[2026-02-17 19:00:56] 2026-02-17 18:00:27,735 | WARNING  | process 4160214 can no longer be monitored (due to stat problems) - aborting
[2026-02-17 19:00:56] 2026-02-17 18:00:27,758 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-17 19:00:56] 2026-02-17 18:00:27,758 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-17 19:00:56] 2026-02-17 18:00:27,758 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-17 19:00:56] 2026-02-17 18:00:27,758 | WARNING  | maxPSS not found in memory monitor output
[2026-02-17 19:00:56] 2026-02-17 18:00:27,758 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-7014648535/payload.stdout) since it has not been created yet
[2026-02-17 19:00:56] 2026-02-17 18:00:27,758 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-17 19:00:56] 2026-02-17 18:00:27,767 | INFO     | sufficient remaining disk space (484209328128 B)
[2026-02-17 19:00:56] 2026-02-17 18:00:27,768 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-17 19:00:56] 2026-02-17 18:00:27,768 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-7014648535/HITS.48508763._013732.pool.root.1 since it does not exist
[2026-02-17 19:00:56] 2026-02-17 18:00:27,794 | INFO     | [job] control thread has finished
[2026-02-17 19:00:56] 2026-02-17 18:00:27,796 | INFO     | number of running child processes to parent process 4160214: 1
[2026-02-17 19:00:56] 2026-02-17 18:00:27,796 | INFO     | maximum number of monitored processes: 6
[2026-02-17 19:00:56] 2026-02-17 18:00:27,796 | INFO     | aborting job monitoring since job object (job id=7014648535) has expired
[2026-02-17 19:00:56] 2026-02-17 18:00:27,796 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-17 19:00:56] 2026-02-17 18:00:27,796 | INFO     | will abort loop
[2026-02-17 19:00:56] 2026-02-17 18:00:27,832 | INFO     | [payload] execute_payloads thread has finished
[2026-02-17 19:00:56] 2026-02-17 18:00:28,144 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-17 19:00:56] 2026-02-17 18:00:28,154 | INFO     | [payload] validate_post thread has finished
[2026-02-17 19:00:56] 2026-02-17 18:00:28,288 | INFO     | [data] control thread has finished
[2026-02-17 19:00:56] 2026-02-17 18:00:28,319 | INFO     | [payload] failed_post thread has finished
[2026-02-17 19:00:56] 2026-02-17 18:00:28,373 | INFO     | [job] validate thread has finished
[2026-02-17 19:00:56] 2026-02-17 18:00:28,618 | INFO     | [job] create_data_payload thread has finished
[2026-02-17 19:00:56] 2026-02-17 18:00:28,802 | INFO     | [job] job monitor thread has finished
[2026-02-17 19:00:56] 2026-02-17 18:00:28,834 | INFO     | [payload] validate_pre thread has finished
[2026-02-17 19:00:56] 2026-02-17 18:00:29,348 | INFO     | [data] copytool_out thread has finished
[2026-02-17 19:00:56] 2026-02-17 18:00:30,351 | INFO     | [data] queue_monitor thread has finished
[2026-02-17 19:00:56] 2026-02-17 18:00:51,154 | INFO     | [monitor] cgroup control has ended
[2026-02-17 19:00:56] 2026-02-17 18:00:51,398 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140518503810880)>', '<ExcThread(monitor, started 140517992011520)>']
[2026-02-17 19:00:56] 2026-02-17 18:00:56,040 | INFO     | PID=4155808 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-17 19:00:56] 2026-02-17 18:00:56,040 | INFO     | found 0 job(s) in 20 queues
[2026-02-17 19:00:56] 2026-02-17 18:00:56,040 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-17 19:00:56] 2026-02-17 18:00:56,040 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-17 19:00:56] 2026-02-17 18:00:56,040 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-17 19:00:56] 2026-02-17 18:00:56,040 | INFO     | [monitor] control thread has ended
[2026-02-17 19:00:56] 2026-02-17 18:00:56,424 | INFO     | all workflow threads have been joined
[2026-02-17 19:00:56] 2026-02-17 18:00:56,425 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-17 19:00:56] 2026-02-17 18:00:56,425 | INFO     | traces error code: 0
[2026-02-17 19:00:56] 2026-02-17 18:00:56,426 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-17 19:00:56] 2026-02-17 18:00:56,467 [wrapper] ==== pilot stdout END ====
[2026-02-17 19:00:56] 2026-02-17 18:00:56,469 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-17 19:00:56] 2026-02-17 18:00:56,471 [wrapper] pilotpid: 4155808
[2026-02-17 19:00:56] 2026-02-17 18:00:56,474 [wrapper] Pilot exit status: 0
[2026-02-17 19:00:56] 2026-02-17 18:00:56,480 [wrapper] pandaids: 7014648535
[2026-02-17 19:00:56] 2026-02-17 18:00:56,492 [wrapper] cleanup supervisor_pilot 4165387 4155809
[2026-02-17 19:00:56] 2026-02-17 18:00:56,494 [wrapper] Test setup, not cleaning
[2026-02-17 19:00:56] 2026-02-17 18:00:56,497 [wrapper] apfmon messages muted
[2026-02-17 19:00:56] 2026-02-17 18:00:56,499 [wrapper] ==== wrapper stdout END ====
[2026-02-17 19:00:56] 2026-02-17 18:00:56,501 [wrapper] ==== wrapper stderr END ====
[2026-02-17 19:00:56]  *** Error codes and diagnostics ***
[2026-02-17 19:00:56]     "exeErrorCode": 0,
[2026-02-17 19:00:56]     "exeErrorDiag": "",
[2026-02-17 19:00:56]     "pilotErrorCode": 0,
[2026-02-17 19:00:56]     "pilotErrorDiag": "",
[2026-02-17 19:00:56]  *** Listing of results directory ***
[2026-02-17 19:00:56] total 948376
[2026-02-17 19:00:56] -rw-r--r-- 1 boinc boinc    584627 Feb 16 19:05 pilot3.tar.gz
[2026-02-17 19:00:56] -rwx------ 1 boinc boinc     36322 Feb 16 19:06 runpilot2-wrapper.sh
[2026-02-17 19:00:56] -rw-r--r-- 1 boinc boinc      5111 Feb 16 19:07 queuedata.json
[2026-02-17 19:00:56] -rw-r--r-- 1 boinc boinc       100 Feb 17 15:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-17 19:00:56] -rwxr-xr-x 1 boinc boinc      7986 Feb 17 15:55 run_atlas
[2026-02-17 19:00:56] -rw-r--r-- 1 boinc boinc       105 Feb 17 15:55 job.xml
[2026-02-17 19:00:56] -rw-r--r-- 2 boinc boinc 679760132 Feb 17 15:55 EVNT.48508760._000271.pool.root.1
[2026-02-17 19:00:56] -rw-r--r-- 2 boinc boinc    597950 Feb 17 15:55 input.tar.gz
[2026-02-17 19:00:56] -rw-r--r-- 2 boinc boinc     15845 Feb 17 15:55 start_atlas.sh
[2026-02-17 19:00:56] drwxrwx--x 2 boinc boinc      4096 Feb 17 15:55 shared
[2026-02-17 19:00:56] -rw-r--r-- 1 boinc boinc         0 Feb 17 15:55 boinc_setup_complete
[2026-02-17 19:00:56] -rw-r--r-- 1 boinc boinc      6206 Feb 17 15:55 init_data.xml
[2026-02-17 19:00:56] -rw-r--r-- 1 boinc boinc         0 Feb 17 15:55 boinc_lockfile
[2026-02-17 19:00:56] -rw-r--r-- 1 boinc boinc      2550 Feb 17 15:55 pandaJob.out
[2026-02-17 19:00:56] -rw------- 1 boinc boinc    999360 Feb 17 15:55 agis_schedconf.cvmfs.json
[2026-02-17 19:00:56] -rw------- 1 boinc boinc       417 Feb 17 15:55 workernode_map.json
[2026-02-17 19:00:56] drwx------ 5 boinc boinc      4096 Feb 17 15:55 pilot3
[2026-02-17 19:00:56] -rw------- 1 boinc boinc 283627253 Feb 17 18:59 HITS.48508763._013732.pool.root.1
[2026-02-17 19:00:56] -rw-r--r-- 1 boinc boinc       531 Feb 17 19:00 boinc_task_state.xml
[2026-02-17 19:00:56] -rw------- 1 boinc boinc      1016 Feb 17 19:00 memory_monitor_summary.json
[2026-02-17 19:00:56] -rw------- 1 boinc boinc        95 Feb 17 19:00 pilot_heartbeat.json
[2026-02-17 19:00:56] -rw------- 1 boinc boinc   1513015 Feb 17 19:00 agis_ddmendpoints.agis.ALL.json
[2026-02-17 19:00:56] -rw------- 1 boinc boinc    338145 Feb 17 19:00 log.48508763._013732.job.log.tgz.1
[2026-02-17 19:00:56] -rw------- 1 boinc boinc      6296 Feb 17 19:00 heartbeat.json
[2026-02-17 19:00:56] -rw-r--r-- 1 boinc boinc      8192 Feb 17 19:00 boinc_mmap_file
[2026-02-17 19:00:56] -rw-r--r-- 1 boinc boinc        28 Feb 17 19:00 wrapper_checkpoint.txt
[2026-02-17 19:00:56] -rw------- 1 boinc boinc      6249 Feb 17 19:00 pilotlog.txt
[2026-02-17 19:00:56] -rw------- 1 boinc boinc   1576092 Feb 17 19:00 log.48508763._013732.job.log.1
[2026-02-17 19:00:56] -rw------- 1 boinc boinc       357 Feb 17 19:00 output.list
[2026-02-17 19:00:56] -rw-r--r-- 1 boinc boinc       620 Feb 17 19:00 runtime_log
[2026-02-17 19:00:56] -rw------- 1 boinc boinc   1935360 Feb 17 19:00 result.tar.gz
[2026-02-17 19:00:56] -rw------- 1 boinc boinc       660 Feb 17 19:00 t3xMDmqAIC9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmgcsKDmcOjLCo.diag
[2026-02-17 19:00:56] -rw-r--r-- 1 boinc boinc      8897 Feb 17 19:00 runtime_log.err
[2026-02-17 19:00:56] -rw-r--r-- 1 boinc boinc      8616 Feb 17 19:00 stderr.txt
[2026-02-17 19:00:56] HITS file was successfully produced:
[2026-02-17 19:00:56] -rw------- 1 boinc boinc 283627253 Feb 17 18:59 shared/HITS.pool.root.1
[2026-02-17 19:00:56]  *** Contents of shared directory: ***
[2026-02-17 19:00:56] total 943312
[2026-02-17 19:00:56] -rw-r--r-- 2 boinc boinc 679760132 Feb 17 15:55 ATLAS.root_0
[2026-02-17 19:00:56] -rw-r--r-- 2 boinc boinc    597950 Feb 17 15:55 input.tar.gz
[2026-02-17 19:00:56] -rw-r--r-- 2 boinc boinc     15845 Feb 17 15:55 start_atlas.sh
[2026-02-17 19:00:56] -rw------- 1 boinc boinc 283627253 Feb 17 18:59 HITS.pool.root.1
[2026-02-17 19:00:56] -rw------- 1 boinc boinc   1935360 Feb 17 19:00 result.tar.gz
19:00:58 (4151779): run_atlas exited; CPU time 21703.889859
19:00:58 (4151779): called boinc_finish(0)

</stderr_txt>
]]>

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