Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
22:34:01 (16680): wrapper (7.7.26015): starting
22:34:01 (16680): wrapper: running run_atlas (--nthreads 8)
[2026-02-16 22:34:01] Arguments: --nthreads 8
[2026-02-16 22:34:01] Threads: 8
[2026-02-16 22:34:01] Checking for CVMFS
[2026-02-16 22:34:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-16 22:34:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-16 22:34:02] Running cvmfs_config stat atlas.cern.ch
[2026-02-16 22:34:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-16 22:34:02] 2.11.0.0 4464 184711 85604 156297 0 186 2105878 4096001 595 130560 3 9874280 99.596 11505851 492 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-02-16 22:34:02] CVMFS is ok
[2026-02-16 22:34:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-16 22:34:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-16 22:34:02] Further information can be found at the LHC@home message board.
[2026-02-16 22:34:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-16 22:34:02] Checking for apptainer binary...
[2026-02-16 22:34:02] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-02-16 22:34:02] apptainer is not installed, using version from CVMFS
[2026-02-16 22:34:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-16 22:34:03] WARNING: Environment variable TMPDIR already has value [/tmp/job_11146765/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node432
[2026-02-16 22:34:03] apptainer works
[2026-02-16 22:34:03] Set ATHENA_PROC_NUMBER=8
[2026-02-16 22:34:03] Set ATHENA_CORE_NUMBER=8
[2026-02-16 22:34:03] Starting ATLAS job with PandaID=7017436625
[2026-02-16 22:34:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11146765/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-16 23:42:27]  *** The last 200 lines of the pilot log: ***
[2026-02-16 23:42:27]  scope=mc23_13p6TeV
[2026-02-16 23:42:27]  status=None
[2026-02-16 23:42:27]  status_code=0
[2026-02-16 23:42:27]  storage_token=
[2026-02-16 23:42:27]  surl=/tmp/job_11146765/atlas/pilot/slots/0/PanDA_Pilot-7017436625/log.48431080._014602.job.log.tgz.1
[2026-02-16 23:42:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/f1/log.48431080._014602.job.log.tgz.1
[2026-02-16 23:42:27]  workdir=None
[2026-02-16 23:42:27] ]
[2026-02-16 23:42:27] 2026-02-16 22:41:51,453 | INFO     | transferring file log.48431080._014602.job.log.tgz.1 from /tmp/job_11146765/atlas/pilot/slots/0/PanDA_Pilot-7017436625/log.48431080._014602.job.log.tgz.1 to /tmp/j
[2026-02-16 23:42:27] 2026-02-16 22:41:51,453 | INFO     | executing command: /usr/bin/env mv /tmp/job_11146765/atlas/pilot/slots/0/PanDA_Pilot-7017436625/log.48431080._014602.job.log.tgz.1 /tmp/job_11146765/atlas/pilot/sl
[2026-02-16 23:42:27] 2026-02-16 22:41:51,461 | INFO     | adding to output.list: log.48431080._014602.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/f1/log.48431080._014602.job.log.tg
[2026-02-16 23:42:27] 2026-02-16 22:41:51,461 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-16 23:42:27] 2026-02-16 22:41:51,461 | INFO     | summary of transferred files:
[2026-02-16 23:42:27] 2026-02-16 22:41:51,461 | INFO     |  -- lfn=log.48431080._014602.job.log.tgz.1, status_code=0, status=transferred
[2026-02-16 23:42:27] 2026-02-16 22:41:51,461 | INFO     | stage-out finished correctly
[2026-02-16 23:42:27] 2026-02-16 22:41:51,781 | INFO     | time since job start (4062s) is within the limit (349056.0s)
[2026-02-16 23:42:27] 2026-02-16 22:41:53,787 | INFO     | time since job start (4064s) is within the limit (349056.0s)
[2026-02-16 23:42:27] 2026-02-16 22:41:54,352 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-16 23:42:27] 2026-02-16 22:41:54,399 | INFO     | job 7017436625 has state=finished
[2026-02-16 23:42:27] 2026-02-16 22:41:54,399 | INFO     | preparing for final server update for job 7017436625 in state='finished'
[2026-02-16 23:42:27] 2026-02-16 22:41:54,399 | INFO     | reading metadata from: /tmp/job_11146765/atlas/pilot/slots/0/PanDA_Pilot-7017436625/jobReport.json
[2026-02-16 23:42:27] 2026-02-16 22:41:54,400 | INFO     | added worker_node to metadata from /tmp/job_11146765/atlas/pilot/slots/0/workernode_map.json
[2026-02-16 23:42:27] 2026-02-16 22:41:54,400 | INFO     | this job has now completed (state=finished)
[2026-02-16 23:42:27] 2026-02-16 22:41:54,401 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-16 23:42:27] 2026-02-16 22:41:54,401 | INFO     | log transfer has been attempted: DONE
[2026-02-16 23:42:27] 2026-02-16 22:41:54,401 | INFO     | job 7017436625 has finished - writing final server update
[2026-02-16 23:42:27] 2026-02-16 22:41:54,401 | INFO     | total number of processed events: 400 (read)
[2026-02-16 23:42:27] 2026-02-16 22:41:54,418 | INFO     | using path: /tmp/job_11146765/atlas/pilot/slots/0/PanDA_Pilot-7017436625/memory_monitor_summary.json (trf name=prmon)
[2026-02-16 23:42:27] 2026-02-16 22:41:54,418 | INFO     | extracted standard info from prmon json
[2026-02-16 23:42:27] 2026-02-16 22:41:54,418 | INFO     | extracted standard memory fields from prmon json
[2026-02-16 23:42:27] 2026-02-16 22:41:54,418 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-16 23:42:27] 2026-02-16 22:41:54,419 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-16 23:42:27] 2026-02-16 22:41:54,419 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-16 23:42:27] 2026-02-16 22:41:54,419 | INFO     | fitting pss+swap vs Time
[2026-02-16 23:42:27] 2026-02-16 22:41:54,419 | INFO     | sum of square deviations: 66959395.0
[2026-02-16 23:42:27] 2026-02-16 22:41:54,420 | INFO     | sum of deviations: -2100652577.5000002
[2026-02-16 23:42:27] 2026-02-16 22:41:54,420 | INFO     | mean x: 1771279770.5
[2026-02-16 23:42:27] 2026-02-16 22:41:54,420 | INFO     | mean y: 2626334.0166666666
[2026-02-16 23:42:27] 2026-02-16 22:41:54,420 | INFO     | intersect: 55571279775.02273
[2026-02-16 23:42:27] 2026-02-16 22:41:54,420 | INFO     | chi2: 0.009331059342889584
[2026-02-16 23:42:27] 2026-02-16 22:41:54,420 | INFO     | current memory leak: -31.37 B/s (using 60 data points, chi2=0.01)
[2026-02-16 23:42:27] 2026-02-16 22:41:54,420 | INFO     | could have reported an average CPU frequency of 2394 MHz (6 samples)
[2026-02-16 23:42:27] 2026-02-16 22:41:54,420 | INFO     | ..............................
[2026-02-16 23:42:27] 2026-02-16 22:41:54,420 | INFO     | . Timing measurements:
[2026-02-16 23:42:27] 2026-02-16 22:41:54,420 | INFO     | . get job = 0 s
[2026-02-16 23:42:27] 2026-02-16 22:41:54,420 | INFO     | . initial setup = 2 s
[2026-02-16 23:42:27] 2026-02-16 22:41:54,420 | INFO     | . payload setup = 2 s
[2026-02-16 23:42:27] 2026-02-16 22:41:54,420 | INFO     | . stage-in = 0 s
[2026-02-16 23:42:27] 2026-02-16 22:41:54,420 | INFO     | . payload execution = 4043 s
[2026-02-16 23:42:27] 2026-02-16 22:41:54,420 | INFO     | . stage-out = 0 s
[2026-02-16 23:42:27] 2026-02-16 22:41:54,420 | INFO     | . log creation = 0 s
[2026-02-16 23:42:27] 2026-02-16 22:41:54,420 | INFO     | ..............................
[2026-02-16 23:42:27] 2026-02-16 22:41:54,877 | INFO     | 
[2026-02-16 23:42:27] 2026-02-16 22:41:54,877 | INFO     | job summary report
[2026-02-16 23:42:27] 2026-02-16 22:41:54,877 | INFO     | --------------------------------------------------
[2026-02-16 23:42:27] 2026-02-16 22:41:54,877 | INFO     | PanDA job id: 7017436625
[2026-02-16 23:42:27] 2026-02-16 22:41:54,877 | INFO     | task id: 48431080
[2026-02-16 23:42:27] 2026-02-16 22:41:54,877 | INFO     | errors: (none)
[2026-02-16 23:42:27] 2026-02-16 22:41:54,877 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-16 23:42:27] 2026-02-16 22:41:54,877 | INFO     | pilot state: finished 
[2026-02-16 23:42:27] 2026-02-16 22:41:54,877 | INFO     | transexitcode: 0
[2026-02-16 23:42:27] 2026-02-16 22:41:54,877 | INFO     | exeerrorcode: 0
[2026-02-16 23:42:27] 2026-02-16 22:41:54,877 | INFO     | exeerrordiag: 
[2026-02-16 23:42:27] 2026-02-16 22:41:54,877 | INFO     | exitcode: 0
[2026-02-16 23:42:27] 2026-02-16 22:41:54,877 | INFO     | exitmsg: OK
[2026-02-16 23:42:27] 2026-02-16 22:41:54,877 | INFO     | cpuconsumptiontime: 27189 s
[2026-02-16 23:42:27] 2026-02-16 22:41:54,877 | INFO     | nevents: 400
[2026-02-16 23:42:27] 2026-02-16 22:41:54,877 | INFO     | neventsw: 0
[2026-02-16 23:42:27] 2026-02-16 22:41:54,877 | INFO     | pid: 25236
[2026-02-16 23:42:27] 2026-02-16 22:41:54,877 | INFO     | pgrp: 25236
[2026-02-16 23:42:27] 2026-02-16 22:41:54,877 | INFO     | corecount: 8
[2026-02-16 23:42:27] 2026-02-16 22:41:54,877 | INFO     | event service: False
[2026-02-16 23:42:27] 2026-02-16 22:41:54,877 | INFO     | sizes: {0: 2281786, 1: 2282358, 11: 2282358, 4049: 2308393, 4051: 2317421, 4054: 2317799}
[2026-02-16 23:42:27] 2026-02-16 22:41:54,877 | INFO     | --------------------------------------------------
[2026-02-16 23:42:27] 2026-02-16 22:41:54,878 | INFO     | 
[2026-02-16 23:42:27] 2026-02-16 22:41:54,878 | INFO     | executing command: ls -lF /tmp/job_11146765/atlas/pilot/slots/0
[2026-02-16 23:42:27] 2026-02-16 22:41:54,887 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-16 23:42:27] 2026-02-16 22:41:54,887 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-16 23:42:27] 2026-02-16 22:41:54,887 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-16 23:42:27] 2026-02-16 22:41:54,887 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-16 23:42:27] 2026-02-16 22:41:54,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-16 23:42:27] 2026-02-16 22:41:54,887 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-16 23:42:27] 2026-02-16 22:41:54,887 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-16 23:42:27] 2026-02-16 22:41:54,887 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-16 23:42:27] 2026-02-16 22:41:54,887 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-16 23:42:27] 2026-02-16 22:41:54,887 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-16 23:42:27] 2026-02-16 22:41:54,887 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-16 23:42:27] 2026-02-16 22:41:54,887 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-16 23:42:27] 2026-02-16 22:41:54,887 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-16 23:42:27] 2026-02-16 22:41:54,888 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-16 23:42:27] 2026-02-16 22:41:54,888 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-16 23:42:27] 2026-02-16 22:41:54,888 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-16 23:42:27] 2026-02-16 22:41:54,888 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-16 23:42:27] 2026-02-16 22:41:54,888 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-16 23:42:27] 2026-02-16 22:41:54,888 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-16 23:42:27] 2026-02-16 22:41:54,888 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-16 23:42:27] 2026-02-16 22:41:54,888 | INFO     | job 7017436625 has completed (purged errors)
[2026-02-16 23:42:27] 2026-02-16 22:41:54,888 | INFO     | overall cleanup function is called
[2026-02-16 23:42:27] 2026-02-16 22:41:55,527 | WARNING  | process 25236 can no longer be monitored (due to stat problems) - aborting
[2026-02-16 23:42:27] 2026-02-16 22:41:55,605 | INFO     | using path: /tmp/job_11146765/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-16 23:42:27] 2026-02-16 22:41:55,606 | INFO     | using path: /tmp/job_11146765/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-16 23:42:27] 2026-02-16 22:41:55,606 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-16 23:42:27] 2026-02-16 22:41:55,606 | WARNING  | maxPSS not found in memory monitor output
[2026-02-16 23:42:27] 2026-02-16 22:41:55,606 | INFO     | skipping file size check of payload stdout file (/tmp/job_11146765/atlas/pilot/slots/0/PanDA_Pilot-7017436625/payload.stdout) since it has not been created yet
[2026-02-16 23:42:27] 2026-02-16 22:41:55,606 | INFO     | executing command: df -mP /tmp/job_11146765/atlas/pilot/slots/0
[2026-02-16 23:42:27] 2026-02-16 22:41:55,613 | INFO     | sufficient remaining disk space (223165284352 B)
[2026-02-16 23:42:27] 2026-02-16 22:41:55,613 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-16 23:42:27] 2026-02-16 22:41:55,613 | INFO     | output file size check: skipping output file /tmp/job_11146765/atlas/pilot/slots/0/PanDA_Pilot-7017436625/HITS.48431080._014602.pool.root.1 since it does not exist
[2026-02-16 23:42:27] 2026-02-16 22:41:55,707 | INFO     | number of running child processes to parent process 25236: 1
[2026-02-16 23:42:27] 2026-02-16 22:41:55,708 | INFO     | maximum number of monitored processes: 6
[2026-02-16 23:42:27] 2026-02-16 22:41:55,708 | INFO     | aborting job monitoring since job object (job id=7017436625) has expired
[2026-02-16 23:42:27] 2026-02-16 22:41:55,894 | INFO     | --- collectZombieJob: --- 10, [25236]
[2026-02-16 23:42:27] 2026-02-16 22:41:55,894 | INFO     | zombie collector waiting for pid 25236
[2026-02-16 23:42:27] 2026-02-16 22:41:55,894 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-16 23:42:27] 2026-02-16 22:41:55,894 | INFO     | collected zombie processes
[2026-02-16 23:42:27] 2026-02-16 22:41:55,894 | INFO     | will attempt to kill all subprocesses of pid=25236
[2026-02-16 23:42:27] 2026-02-16 22:41:55,985 | INFO     | process IDs to be killed: [25236] (in reverse order)
[2026-02-16 23:42:27] 2026-02-16 22:41:56,020 | WARNING  | found no corresponding commands to process id(s)
[2026-02-16 23:42:27] 2026-02-16 22:41:56,020 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-16 23:42:27] 2026-02-16 22:41:56,023 | INFO     | did not find any defunct processes belonging to 25236
[2026-02-16 23:42:27] 2026-02-16 22:41:56,026 | INFO     | did not find any defunct processes belonging to 25236
[2026-02-16 23:42:27] 2026-02-16 22:41:56,026 | INFO     | ready for new job
[2026-02-16 23:42:27] 2026-02-16 22:41:56,027 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-16 23:42:27] 2026-02-16 22:41:56,027 | INFO     | **************************************
[2026-02-16 23:42:27] 2026-02-16 22:41:56,027 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-16 23:42:27] 2026-02-16 22:41:56,027 | INFO     | **************************************
[2026-02-16 23:42:27] 2026-02-16 22:41:56,027 | INFO     | 
[2026-02-16 23:42:27] 2026-02-16 22:41:56,042 | INFO     | architecture information:
[2026-02-16 23:42:27] 2026-02-16 22:41:56,042 | INFO     | executing command: cat /etc/os-release
[2026-02-16 23:42:27] 2026-02-16 22:41:56,048 | INFO     | cat /etc/os-release:
[2026-02-16 23:42:27] NAME="CentOS Linux"
[2026-02-16 23:42:27] VERSION="7 (Core)"
[2026-02-16 23:42:27] ID="centos"
[2026-02-16 23:42:27] ID_LIKE="rhel fedora"
[2026-02-16 23:42:27] VERSION_ID="7"
[2026-02-16 23:42:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-16 23:42:27] ANSI_COLOR="0;31"
[2026-02-16 23:42:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-16 23:42:27] HOME_URL="https://www.centos.org/"
[2026-02-16 23:42:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-16 23:42:27] 
[2026-02-16 23:42:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-16 23:42:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-16 23:42:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-16 23:42:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-16 23:42:27] 
[2026-02-16 23:42:27] 2026-02-16 22:41:56,048 | INFO     | **************************************
[2026-02-16 23:42:27] 2026-02-16 22:41:56,551 | INFO     | executing command: df -mP /tmp/job_11146765/atlas/pilot/slots/0
[2026-02-16 23:42:27] 2026-02-16 22:41:56,557 | INFO     | sufficient remaining disk space (223165284352 B)
[2026-02-16 23:42:27] 2026-02-16 22:41:56,557 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-16 23:42:27] 2026-02-16 22:41:56,557 | INFO     | current server update state: UPDATING_FINAL
[2026-02-16 23:42:27] 2026-02-16 22:41:56,557 | INFO     | update_server=False
[2026-02-16 23:42:27] 2026-02-16 22:41:56,557 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-16 23:42:27] 2026-02-16 22:41:56,557 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-16 23:42:27] 2026-02-16 22:41:56,557 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-16 23:42:27] 2026-02-16 22:41:56,557 | INFO     | will abort loop
[2026-02-16 23:42:27] 2026-02-16 22:41:57,019 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-16 23:42:27] 2026-02-16 22:41:57,164 | INFO     | all data control threads have been joined
[2026-02-16 23:42:27] 2026-02-16 22:41:57,554 | INFO     | all payload control threads have been joined
[2026-02-16 23:42:27] 2026-02-16 22:41:57,562 | INFO     | [job] retrieve thread has finished
[2026-02-16 23:42:27] 2026-02-16 22:41:57,562 | INFO     | [job] job monitor thread has finished
[2026-02-16 23:42:27] 2026-02-16 22:41:57,567 | INFO     | [payload] validate_pre thread has finished
[2026-02-16 23:42:27] 2026-02-16 22:41:57,781 | INFO     | all job control threads have been joined
[2026-02-16 23:42:27] 2026-02-16 22:41:57,974 | INFO     | [data] copytool_in thread has finished
[2026-02-16 23:42:27] 2026-02-16 22:41:57,974 | INFO     | [job] validate thread has finished
[2026-02-16 23:42:27] 2026-02-16 22:41:58,050 | INFO     | [payload] failed_post thread has finished
[2026-02-16 23:42:27] 2026-02-16 22:41:58,170 | INFO     | [data] control thread has finished
[2026-02-16 23:42:27] 2026-02-16 22:41:58,276 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-16 23:42:27] 2026-02-16 22:41:58,309 | INFO     | [payload] execute_payloads thread has finished
[2026-02-16 23:42:27] 2026-02-16 22:41:58,560 | INFO     | [payload] control thread has finished
[2026-02-16 23:42:27] 2026-02-16 22:41:58,787 | INFO     | [job] control thread has finished
[2026-02-16 23:42:27] 2026-02-16 22:41:58,836 | INFO     | [job] create_data_payload thread has finished
[2026-02-16 23:42:27] 2026-02-16 22:41:58,860 | INFO     | [payload] validate_post thread has finished
[2026-02-16 23:42:27] 2026-02-16 22:41:59,024 | INFO     | [data] copytool_out thread has finished
[2026-02-16 23:42:27] 2026-02-16 22:41:59,477 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-16 23:42:27] 2026-02-16 22:42:00,482 | INFO     | [job] queue monitor thread has finished
[2026-02-16 23:42:27] 2026-02-16 22:42:00,563 | INFO     | [data] queue_monitor thread has finished
[2026-02-16 23:42:27] 2026-02-16 22:42:15,543 | INFO     | [monitor] cgroup control has ended
[2026-02-16 23:42:27] 2026-02-16 22:42:15,744 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456056887040)>']
[2026-02-16 23:42:27] 2026-02-16 22:42:20,769 | INFO     | all workflow threads have been joined
[2026-02-16 23:42:27] 2026-02-16 22:42:20,769 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-16 23:42:27] 2026-02-16 22:42:20,769 | INFO     | traces error code: 0
[2026-02-16 23:42:27] 2026-02-16 22:42:20,769 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-16 23:42:27] 2026-02-16 22:42:26,972 | INFO     | PID=20641 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-16 23:42:27] 2026-02-16 22:42:26,972 | INFO     | .. there are 3 such processes running
[2026-02-16 23:42:27] 2026-02-16 22:42:26,972 | INFO     | found 0 job(s) in 20 queues
[2026-02-16 23:42:27] 2026-02-16 22:42:26,972 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-16 23:42:27] 2026-02-16 22:42:26,973 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-16 23:42:27] 2026-02-16 22:42:26,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-16 23:42:27] 2026-02-16 22:42:26,973 | INFO     | [monitor] control thread has ended
[2026-02-16 23:42:27] 2026-02-16 22:42:27,026 [wrapper] ==== pilot stdout END ====
[2026-02-16 23:42:27] 2026-02-16 22:42:27,027 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-16 23:42:27] 2026-02-16 22:42:27,028 [wrapper] pilotpid: 20641
[2026-02-16 23:42:27] 2026-02-16 22:42:27,029 [wrapper] Pilot exit status: 0
[2026-02-16 23:42:27] 2026-02-16 22:42:27,035 [wrapper] pandaids: 7017436625
[2026-02-16 23:42:27] 2026-02-16 22:42:27,057 [wrapper] cleanup supervisor_pilot  2689 20642
[2026-02-16 23:42:27] 2026-02-16 22:42:27,058 [wrapper] Test setup, not cleaning
[2026-02-16 23:42:27] 2026-02-16 22:42:27,059 [wrapper] apfmon messages muted
[2026-02-16 23:42:27] 2026-02-16 22:42:27,061 [wrapper] ==== wrapper stdout END ====
[2026-02-16 23:42:27] 2026-02-16 22:42:27,062 [wrapper] ==== wrapper stderr END ====
[2026-02-16 23:42:27]  *** Error codes and diagnostics ***
[2026-02-16 23:42:27]     "exeErrorCode": 0,
[2026-02-16 23:42:27]     "exeErrorDiag": "",
[2026-02-16 23:42:27]     "pilotErrorCode": 0,
[2026-02-16 23:42:27]     "pilotErrorDiag": "",
[2026-02-16 23:42:27]  *** Listing of results directory ***
[2026-02-16 23:42:27] total 888872
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user      5111 Feb 15 08:00 queuedata.json
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user    584627 Feb 15 08:00 pilot3.tar.gz
[2026-02-16 23:42:27] -rwx------ 1 mf493845 unix-user     36322 Feb 15 08:00 runpilot2-wrapper.sh
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user       100 Feb 16 20:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-16 23:42:27] -rwxr-xr-x 1 mf493845 unix-user      7986 Feb 16 20:19 run_atlas
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user       105 Feb 16 20:19 job.xml
[2026-02-16 23:42:27] -rw-r--r-- 2 mf493845 unix-user 646157462 Feb 16 22:34 EVNT.48431078._000242.pool.root.1
[2026-02-16 23:42:27] -rw-r--r-- 2 mf493845 unix-user     15845 Feb 16 22:34 start_atlas.sh
[2026-02-16 23:42:27] drwxrwx--x 2 mf493845 unix-user       100 Feb 16 22:34 shared
[2026-02-16 23:42:27] -rw-r--r-- 2 mf493845 unix-user    597967 Feb 16 22:34 input.tar.gz
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user      6391 Feb 16 22:34 init_data.xml
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user         0 Feb 16 22:34 boinc_setup_complete
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user      8192 Feb 16 22:34 boinc_mmap_file
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user         0 Feb 16 22:34 boinc_lockfile
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user      2550 Feb 16 22:34 pandaJob.out
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user   1001137 Feb 16 22:34 agis_schedconf.cvmfs.json
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user   1513015 Feb 16 22:34 agis_ddmendpoints.agis.ALL.json
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user       414 Feb 16 22:34 workernode_map.json
[2026-02-16 23:42:27] drwx------ 5 mf493845 unix-user       440 Feb 16 22:34 pilot3
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user 258252834 Feb 16 23:41 HITS.48431080._014602.pool.root.1
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user        95 Feb 16 23:41 pilot_heartbeat.json
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user      1011 Feb 16 23:41 memory_monitor_summary.json
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user    315574 Feb 16 23:41 log.48431080._014602.job.log.tgz.1
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user      6299 Feb 16 23:41 heartbeat.json
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user       820 Feb 16 23:42 pilotlog.txt
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user    627532 Feb 16 23:42 log.48431080._014602.job.log.1
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user       357 Feb 16 23:42 output.list
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user       620 Feb 16 23:42 runtime_log
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user    962560 Feb 16 23:42 result.tar.gz
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user       641 Feb 16 23:42 TEuMDmTIlB9n9Rq4apOajLDm4fhM0noT9bVooX4SDmWFoKDm5ZnTWn.diag
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user      9219 Feb 16 23:42 runtime_log.err
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user     22691 Feb 16 23:42 stderr.txt
[2026-02-16 23:42:27] HITS file was successfully produced:
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user 258252834 Feb 16 23:41 shared/HITS.pool.root.1
[2026-02-16 23:42:27]  *** Contents of shared directory: ***
[2026-02-16 23:42:27] total 884760
[2026-02-16 23:42:27] -rw-r--r-- 2 mf493845 unix-user 646157462 Feb 16 22:34 ATLAS.root_0
[2026-02-16 23:42:27] -rw-r--r-- 2 mf493845 unix-user     15845 Feb 16 22:34 start_atlas.sh
[2026-02-16 23:42:27] -rw-r--r-- 2 mf493845 unix-user    597967 Feb 16 22:34 input.tar.gz
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user 258252834 Feb 16 23:41 HITS.pool.root.1
[2026-02-16 23:42:27] -rw------- 1 mf493845 unix-user    962560 Feb 16 23:42 result.tar.gz
23:42:29 (16680): run_atlas exited; CPU time 27240.543499
23:42:29 (16680): called boinc_finish(0)

</stderr_txt>
]]>

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