Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:35:59 (168919): wrapper (7.7.26015): starting
23:35:59 (168919): wrapper: running run_atlas (--nthreads 4)
[2026-02-16 23:35:59] Arguments: --nthreads 4
[2026-02-16 23:35:59] Threads: 4
[2026-02-16 23:35:59] Checking for CVMFS
[2026-02-16 23:35:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-16 23:35:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-16 23:35:59] Running cvmfs_config stat atlas.cern.ch
[2026-02-16 23:35:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-16 23:35:59] 2.9.2.0 3064 611 78784 156299 2 188 31404595 36864001 0 130560 0 450727 99.987 23470 20515 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-16 23:35:59] CVMFS is ok
[2026-02-16 23:35:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-16 23:35:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-16 23:35:59] Further information can be found at the LHC@home message board.
[2026-02-16 23:35:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-16 23:35:59] Checking for apptainer binary...
[2026-02-16 23:35:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-16 23:35:59] Running /usr/bin/apptainer --version
[2026-02-16 23:35:59] apptainer version 1.4.1-1.1
[2026-02-16 23:35:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-16 23:35:59] thA373a
[2026-02-16 23:35:59] apptainer works
[2026-02-16 23:35:59] Set ATHENA_PROC_NUMBER=4
[2026-02-16 23:35:59] Set ATHENA_CORE_NUMBER=4
[2026-02-16 23:35:59] Starting ATLAS job with PandaID=7013074314
[2026-02-16 23:35:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-16 23:44:17]  *** The last 200 lines of the pilot log: ***
[2026-02-16 23:44:17] 2026-02-16 22:43:41,233 | INFO     | [job] create_data_payload thread has finished
[2026-02-16 23:44:17] 2026-02-16 22:43:41,319 | INFO     | [payload] validate_pre thread has finished
[2026-02-16 23:44:17] 2026-02-16 22:43:41,440 | INFO     | [data] copytool_in thread has finished
[2026-02-16 23:44:17] 2026-02-16 22:43:41,511 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-16 23:44:17] 2026-02-16 22:43:41,655 | INFO     | [payload] execute_payloads thread has finished
[2026-02-16 23:44:17] 2026-02-16 22:43:41,691 | INFO     | [payload] validate_post thread has finished
[2026-02-16 23:44:17] 2026-02-16 22:43:42,402 | INFO     | [data] copytool_out thread has finished
[2026-02-16 23:44:17] 2026-02-16 22:43:44,019 | INFO     | [data] queue_monitor thread has finished
[2026-02-16 23:44:17] 2026-02-16 22:44:10,611 | INFO     | [monitor] cgroup control has ended
[2026-02-16 23:44:17] 2026-02-16 22:44:12,037 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139883943991104)>', '<ExcThread(monitor, started 139883309946624)>']
[2026-02-16 23:44:17] 2026-02-16 22:44:12,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-16 23:44:17] 2026-02-16 22:44:12,433 | INFO     | [monitor] control thread has ended
[2026-02-16 23:44:17] 2026-02-16 22:44:17,062 | INFO     | all workflow threads have been joined
[2026-02-16 23:44:17] 2026-02-16 22:44:17,063 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-16 23:44:17] 2026-02-16 22:44:17,063 | INFO     | traces error code: 0
[2026-02-16 23:44:17] 2026-02-16 22:44:17,063 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-16 23:44:17] 2026-02-16 22:44:17,140 [wrapper] ==== pilot stdout END ====
[2026-02-16 23:44:17] 2026-02-16 22:44:17,143 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-16 23:44:17] 2026-02-16 22:44:17,147 [wrapper] pilotpid: 172724
[2026-02-16 23:44:17] 2026-02-16 22:44:17,151 [wrapper] Pilot exit status: 0
[2026-02-16 23:44:17] 2026-02-16 22:44:17,161 [wrapper] pandaids: 7013074314
[2026-02-16 23:44:17] 2026-02-16 22:44:17,183 [wrapper] cleanup supervisor_pilot  172730 172725
[2026-02-16 23:44:17] 2026-02-16 22:44:17,187 [wrapper] Test setup, not cleaning
[2026-02-16 23:44:17] 2026-02-16 22:44:17,191 [wrapper] apfmon messages muted
[2026-02-16 23:44:17] 2026-02-16 22:44:17,195 [wrapper] ==== wrapper stdout END ====
[2026-02-16 23:44:17] 2026-02-16 22:44:17,198 [wrapper] ==== wrapper stderr END ====
[2026-02-16 23:44:17]  *** Error codes and diagnostics ***
[2026-02-16 23:44:17]     "exeErrorCode": 65,
[2026-02-16 23:44:17]     "exeErrorDiag": "EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"; Possible memory leak: 'pss' slope: 8678.86 KB/s",
[2026-02-16 23:44:17]     "pilotErrorCode": 1305,
[2026-02-16 23:44:17]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"; Possib",
[2026-02-16 23:44:17]  *** Listing of results directory ***
[2026-02-16 23:44:17] total 675056
[2026-02-16 23:44:17] -rwx------ 1 boinc boinc     36322 Feb 16 06:51 runpilot2-wrapper.sh
[2026-02-16 23:44:17] -rw-r--r-- 1 boinc boinc    584627 Feb 16 06:55 pilot3.tar.gz
[2026-02-16 23:44:17] -rw-r--r-- 1 boinc boinc      5111 Feb 16 06:56 queuedata.json
[2026-02-16 23:44:17] -rw-r--r-- 1 boinc boinc       100 Feb 16 23:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-16 23:44:17] -rwxr-xr-x 1 boinc boinc      7986 Feb 16 23:35 run_atlas
[2026-02-16 23:44:17] -rw-r--r-- 1 boinc boinc       105 Feb 16 23:35 job.xml
[2026-02-16 23:44:17] -rw-r--r-- 2 boinc boinc 686789778 Feb 16 23:35 EVNT.48508760._000184.pool.root.1
[2026-02-16 23:44:17] -rw-r--r-- 2 boinc boinc    597953 Feb 16 23:35 input.tar.gz
[2026-02-16 23:44:17] -rw-r--r-- 2 boinc boinc     15845 Feb 16 23:35 start_atlas.sh
[2026-02-16 23:44:17] drwxrwx--x 2 boinc boinc      4096 Feb 16 23:35 shared
[2026-02-16 23:44:17] -rw-r--r-- 1 boinc boinc         0 Feb 16 23:35 boinc_setup_complete
[2026-02-16 23:44:17] -rw-r--r-- 1 boinc boinc      6377 Feb 16 23:35 init_data.xml
[2026-02-16 23:44:17] -rw-r--r-- 1 boinc boinc         0 Feb 16 23:35 boinc_lockfile
[2026-02-16 23:44:17] -rw-r--r-- 1 boinc boinc      2549 Feb 16 23:35 pandaJob.out
[2026-02-16 23:44:17] -rw------- 1 boinc boinc   1001145 Feb 16 23:36 agis_schedconf.cvmfs.json
[2026-02-16 23:44:17] -rw------- 1 boinc boinc   1513015 Feb 16 23:36 agis_ddmendpoints.agis.ALL.json
[2026-02-16 23:44:17] -rw------- 1 boinc boinc       428 Feb 16 23:36 workernode_map.json
[2026-02-16 23:44:17] drwx------ 5 boinc boinc      4096 Feb 16 23:36 pilot3
[2026-02-16 23:44:17] -rw-r--r-- 1 boinc boinc       528 Feb 16 23:41 boinc_task_state.xml
[2026-02-16 23:44:17] -rw------- 1 boinc boinc      1004 Feb 16 23:41 memory_monitor_summary.json
[2026-02-16 23:44:17] -rw------- 1 boinc boinc    154354 Feb 16 23:41 log.48508763._009368.job.log.tgz.1
[2026-02-16 23:44:17] -rw------- 1 boinc boinc        95 Feb 16 23:43 pilot_heartbeat.json
[2026-02-16 23:44:17] -rw------- 1 boinc boinc      8088 Feb 16 23:43 heartbeat.json
[2026-02-16 23:44:17] -rw-r--r-- 1 boinc boinc      8192 Feb 16 23:44 boinc_mmap_file
[2026-02-16 23:44:17] -rw-r--r-- 1 boinc boinc        24 Feb 16 23:44 wrapper_checkpoint.txt
[2026-02-16 23:44:17] -rw------- 1 boinc boinc      4552 Feb 16 23:44 pilotlog.txt
[2026-02-16 23:44:17] -rw------- 1 boinc boinc    119141 Feb 16 23:44 log.48508763._009368.job.log.1
[2026-02-16 23:44:17] -rw------- 1 boinc boinc       188 Feb 16 23:44 output.list
[2026-02-16 23:44:17] -rw-r--r-- 1 boinc boinc       620 Feb 16 23:44 runtime_log
[2026-02-16 23:44:17] -rw------- 1 boinc boinc    296960 Feb 16 23:44 result.tar.gz
[2026-02-16 23:44:17] -rw-r--r-- 1 boinc boinc      8748 Feb 16 23:44 runtime_log.err
[2026-02-16 23:44:17] -rw------- 1 boinc boinc       651 Feb 16 23:44 DbKMDmXh6B9n9Rq4apOajLDm4fhM0noT9bVooX4SDmhdqKDmbl73sn.diag
[2026-02-16 23:44:17] -rw-r--r-- 1 boinc boinc      5461 Feb 16 23:44 stderr.txt
[2026-02-16 23:44:17] No HITS result produced
[2026-02-16 23:44:17]  *** Contents of shared directory: ***
[2026-02-16 23:44:17] total 671592
[2026-02-16 23:44:17] -rw-r--r-- 2 boinc boinc 686789778 Feb 16 23:35 ATLAS.root_0
[2026-02-16 23:44:17] -rw-r--r-- 2 boinc boinc    597953 Feb 16 23:35 input.tar.gz
[2026-02-16 23:44:17] -rw-r--r-- 2 boinc boinc     15845 Feb 16 23:35 start_atlas.sh
[2026-02-16 23:44:17] -rw------- 1 boinc boinc    296960 Feb 16 23:44 result.tar.gz
23:44:19 (168919): run_atlas exited; CPU time 183.050155
23:44:19 (168919): called boinc_finish(0)

</stderr_txt>
]]>

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