Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:18:50 (179976): wrapper (7.7.26015): starting
02:18:50 (179976): wrapper: running run_atlas (--nthreads 3)
[2026-02-17 02:18:50] Arguments: --nthreads 3
[2026-02-17 02:18:50] Threads: 3
[2026-02-17 02:18:50] Checking for CVMFS
[2026-02-17 02:18:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-17 02:18:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-17 02:18:51] Running cvmfs_config stat atlas.cern.ch
[2026-02-17 02:19:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-17 02:19:12] 2.9.2.0 4025606 2989 69060 156304 3 49 20916331 36864000 0 130560 0 974166 99.984 81844 19104 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-17 02:19:12] CVMFS is ok
[2026-02-17 02:19:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-17 02:19:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-17 02:19:12] Further information can be found at the LHC@home message board.
[2026-02-17 02:19:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-17 02:19:12] Checking for apptainer binary...
[2026-02-17 02:19:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-17 02:19:12] Running /usr/bin/apptainer --version
[2026-02-17 02:19:12] apptainer version 1.4.1-1.1
[2026-02-17 02:19:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-17 02:19:12] atlasA221b
[2026-02-17 02:19:12] apptainer works
[2026-02-17 02:19:12] Set ATHENA_PROC_NUMBER=3
[2026-02-17 02:19:12] Set ATHENA_CORE_NUMBER=3
[2026-02-17 02:19:12] Starting ATLAS job with PandaID=7012729916
[2026-02-17 02:19:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-17 04:43:55]  *** The last 200 lines of the pilot log: ***
[2026-02-17 04:43:55] 2026-02-17 03:43:24,301 | WARNING  | found no corresponding commands to process id(s)
[2026-02-17 04:43:55] 2026-02-17 03:43:24,301 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-17 04:43:55] 2026-02-17 03:43:24,302 | INFO     | did not find any defunct processes belonging to 188445
[2026-02-17 04:43:55] 2026-02-17 03:43:24,304 | INFO     | did not find any defunct processes belonging to 188445
[2026-02-17 04:43:55] 2026-02-17 03:43:24,304 | INFO     | ready for new job
[2026-02-17 04:43:55] 2026-02-17 03:43:24,304 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-17 04:43:55] 2026-02-17 03:43:24,304 | INFO     | **************************************
[2026-02-17 04:43:55] 2026-02-17 03:43:24,305 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-17 04:43:55] 2026-02-17 03:43:24,305 | INFO     | **************************************
[2026-02-17 04:43:55] 2026-02-17 03:43:24,305 | INFO     | 
[2026-02-17 04:43:55] 2026-02-17 03:43:24,305 | INFO     | architecture information:
[2026-02-17 04:43:55] 2026-02-17 03:43:24,305 | INFO     | executing command: cat /etc/os-release
[2026-02-17 04:43:55] 2026-02-17 03:43:24,317 | INFO     | cat /etc/os-release:
[2026-02-17 04:43:55] NAME="CentOS Linux"
[2026-02-17 04:43:55] VERSION="7 (Core)"
[2026-02-17 04:43:55] ID="centos"
[2026-02-17 04:43:55] ID_LIKE="rhel fedora"
[2026-02-17 04:43:55] VERSION_ID="7"
[2026-02-17 04:43:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-17 04:43:55] ANSI_COLOR="0;31"
[2026-02-17 04:43:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-17 04:43:55] HOME_URL="https://www.centos.org/"
[2026-02-17 04:43:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-17 04:43:55] 
[2026-02-17 04:43:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-17 04:43:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-17 04:43:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-17 04:43:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-17 04:43:55] 
[2026-02-17 04:43:55] 2026-02-17 03:43:24,317 | INFO     | **************************************
[2026-02-17 04:43:55] 2026-02-17 03:43:24,819 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-17 04:43:55] 2026-02-17 03:43:24,833 | INFO     | sufficient remaining disk space (335703703552 B)
[2026-02-17 04:43:55] 2026-02-17 03:43:24,833 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-17 04:43:55] 2026-02-17 03:43:24,833 | INFO     | current server update state: UPDATING_FINAL
[2026-02-17 04:43:55] 2026-02-17 03:43:24,833 | INFO     | update_server=False
[2026-02-17 04:43:55] 2026-02-17 03:43:24,833 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-17 04:43:55] 2026-02-17 03:43:24,834 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-17 04:43:55] 2026-02-17 03:43:24,834 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-17 04:43:55] 2026-02-17 03:43:24,834 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-17 04:43:55] 2026-02-17 03:43:24,834 | INFO     | aborting loop
[2026-02-17 04:43:55] 2026-02-17 03:43:25,063 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-17 04:43:55] 2026-02-17 03:43:25,088 | INFO     | all job control threads have been joined
[2026-02-17 04:43:55] 2026-02-17 03:43:25,109 | INFO     | all payload control threads have been joined
[2026-02-17 04:43:55] 2026-02-17 03:43:25,632 | INFO     | all data control threads have been joined
[2026-02-17 04:43:55] 2026-02-17 03:43:25,839 | INFO     | [job] retrieve thread has finished
[2026-02-17 04:43:55] 2026-02-17 03:43:25,840 | INFO     | [job] queue monitor thread has finished
[2026-02-17 04:43:55] 2026-02-17 03:43:25,840 | INFO     | [job] job monitor thread has finished
[2026-02-17 04:43:55] 2026-02-17 03:43:25,853 | INFO     | [payload] validate_pre thread has finished
[2026-02-17 04:43:55] 2026-02-17 03:43:25,876 | INFO     | [data] copytool_in thread has finished
[2026-02-17 04:43:55] 2026-02-17 03:43:25,900 | INFO     | [payload] validate_post thread has finished
[2026-02-17 04:43:55] 2026-02-17 03:43:26,039 | INFO     | [job] create_data_payload thread has finished
[2026-02-17 04:43:55] 2026-02-17 03:43:26,094 | INFO     | [job] control thread has finished
[2026-02-17 04:43:55] 2026-02-17 03:43:26,115 | INFO     | [payload] control thread has finished
[2026-02-17 04:43:55] 2026-02-17 03:43:26,396 | INFO     | [payload] failed_post thread has finished
[2026-02-17 04:43:55] 2026-02-17 03:43:26,637 | INFO     | [data] control thread has finished
[2026-02-17 04:43:55] 2026-02-17 03:43:27,068 | INFO     | [data] copytool_out thread has finished
[2026-02-17 04:43:55] 2026-02-17 03:43:27,158 | INFO     | [payload] execute_payloads thread has finished
[2026-02-17 04:43:55] 2026-02-17 03:43:27,281 | INFO     | [job] validate thread has finished
[2026-02-17 04:43:55] 2026-02-17 03:43:28,841 | INFO     | [data] queue_monitor thread has finished
[2026-02-17 04:43:55] 2026-02-17 03:43:35,515 | INFO     | job.realtimelogging is not enabled
[2026-02-17 04:43:55] 2026-02-17 03:43:36,521 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-17 04:43:55] 2026-02-17 03:43:41,172 | INFO     | [monitor] cgroup control has ended
[2026-02-17 04:43:55] 2026-02-17 03:43:42,173 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140683365902144)>', '<ExcThread(monitor, started 140682652018432)>']
[2026-02-17 04:43:55] 2026-02-17 03:43:47,199 | INFO     | all workflow threads have been joined
[2026-02-17 04:43:55] 2026-02-17 03:43:47,200 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-17 04:43:55] 2026-02-17 03:43:47,200 | INFO     | traces error code: 0
[2026-02-17 04:43:55] 2026-02-17 03:43:47,201 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-17 04:43:55] 2026-02-17 03:43:55,576 | INFO     | PID=184022 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-17 04:43:55] 2026-02-17 03:43:55,576 | INFO     | found 0 job(s) in 20 queues
[2026-02-17 04:43:55] 2026-02-17 03:43:55,576 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-17 04:43:55] 2026-02-17 03:43:55,576 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-17 04:43:55] 2026-02-17 03:43:55,576 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-17 04:43:55] 2026-02-17 03:43:55,576 | INFO     | [monitor] control thread has ended
[2026-02-17 04:43:55] 2026-02-17 03:43:55,623 [wrapper] ==== pilot stdout END ====
[2026-02-17 04:43:55] 2026-02-17 03:43:55,627 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-17 04:43:55] 2026-02-17 03:43:55,630 [wrapper] pilotpid: 184022
[2026-02-17 04:43:55] 2026-02-17 03:43:55,633 [wrapper] Pilot exit status: 0
[2026-02-17 04:43:55] 2026-02-17 03:43:55,641 [wrapper] pandaids: 7012729916
[2026-02-17 04:43:55] 2026-02-17 03:43:55,661 [wrapper] cleanup supervisor_pilot  194415 184023
[2026-02-17 04:43:55] 2026-02-17 03:43:55,664 [wrapper] Test setup, not cleaning
[2026-02-17 04:43:55] 2026-02-17 03:43:55,667 [wrapper] apfmon messages muted
[2026-02-17 04:43:55] 2026-02-17 03:43:55,670 [wrapper] ==== wrapper stdout END ====
[2026-02-17 04:43:55] 2026-02-17 03:43:55,672 [wrapper] ==== wrapper stderr END ====
[2026-02-17 04:43:55]  *** Error codes and diagnostics ***
[2026-02-17 04:43:55]     "exeErrorCode": 0,
[2026-02-17 04:43:55]     "exeErrorDiag": "",
[2026-02-17 04:43:55]     "pilotErrorCode": 0,
[2026-02-17 04:43:55]     "pilotErrorDiag": "",
[2026-02-17 04:43:55]  *** Listing of results directory ***
[2026-02-17 04:43:55] total 954328
[2026-02-17 04:43:55] -rw-r--r-- 1 boinc boinc    584627 Feb 16 06:08 pilot3.tar.gz
[2026-02-17 04:43:55] -rwx------ 1 boinc boinc     36322 Feb 16 06:09 runpilot2-wrapper.sh
[2026-02-17 04:43:55] -rw-r--r-- 1 boinc boinc      5111 Feb 16 06:09 queuedata.json
[2026-02-17 04:43:55] -rw-r--r-- 1 boinc boinc       100 Feb 17 02:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-17 04:43:55] -rwxr-xr-x 1 boinc boinc      7986 Feb 17 02:18 run_atlas
[2026-02-17 04:43:55] -rw-r--r-- 1 boinc boinc       105 Feb 17 02:18 job.xml
[2026-02-17 04:43:55] -rw-r--r-- 2 boinc boinc 681203647 Feb 17 02:18 EVNT.48508760._000147.pool.root.1
[2026-02-17 04:43:55] drwxrwx--x 2 boinc boinc      4096 Feb 17 02:18 shared
[2026-02-17 04:43:55] -rw-r--r-- 2 boinc boinc    597947 Feb 17 02:18 input.tar.gz
[2026-02-17 04:43:55] -rw-r--r-- 2 boinc boinc     15845 Feb 17 02:18 start_atlas.sh
[2026-02-17 04:43:55] -rw-r--r-- 1 boinc boinc         0 Feb 17 02:18 boinc_setup_complete
[2026-02-17 04:43:55] -rw-r--r-- 1 boinc boinc      6199 Feb 17 02:18 init_data.xml
[2026-02-17 04:43:55] -rw-r--r-- 1 boinc boinc         0 Feb 17 02:18 boinc_lockfile
[2026-02-17 04:43:55] -rw-r--r-- 1 boinc boinc      2548 Feb 17 02:19 pandaJob.out
[2026-02-17 04:43:55] -rw------- 1 boinc boinc   1001145 Feb 17 02:19 agis_schedconf.cvmfs.json
[2026-02-17 04:43:55] -rw------- 1 boinc boinc   1513015 Feb 17 02:19 agis_ddmendpoints.agis.ALL.json
[2026-02-17 04:43:55] -rw------- 1 boinc boinc       430 Feb 17 02:19 workernode_map.json
[2026-02-17 04:43:55] drwx------ 5 boinc boinc      4096 Feb 17 02:19 pilot3
[2026-02-17 04:43:55] -rw------- 1 boinc boinc 289049722 Feb 17 04:42 HITS.48508763._007485.pool.root.1
[2026-02-17 04:43:55] -rw-r--r-- 1 boinc boinc       530 Feb 17 04:43 boinc_task_state.xml
[2026-02-17 04:43:55] -rw------- 1 boinc boinc        95 Feb 17 04:43 pilot_heartbeat.json
[2026-02-17 04:43:55] -rw------- 1 boinc boinc      1018 Feb 17 04:43 memory_monitor_summary.json
[2026-02-17 04:43:55] -rw------- 1 boinc boinc    299234 Feb 17 04:43 log.48508763._007485.job.log.tgz.1
[2026-02-17 04:43:55] -rw------- 1 boinc boinc      6322 Feb 17 04:43 heartbeat.json
[2026-02-17 04:43:55] -rw-r--r-- 1 boinc boinc      8192 Feb 17 04:43 boinc_mmap_file
[2026-02-17 04:43:55] -rw-r--r-- 1 boinc boinc        27 Feb 17 04:43 wrapper_checkpoint.txt
[2026-02-17 04:43:55] -rw------- 1 boinc boinc       746 Feb 17 04:43 pilotlog.txt
[2026-02-17 04:43:55] -rw------- 1 boinc boinc   1229093 Feb 17 04:43 log.48508763._007485.job.log.1
[2026-02-17 04:43:55] -rw------- 1 boinc boinc       357 Feb 17 04:43 output.list
[2026-02-17 04:43:55] -rw-r--r-- 1 boinc boinc       620 Feb 17 04:43 runtime_log
[2026-02-17 04:43:55] -rw------- 1 boinc boinc   1546240 Feb 17 04:43 result.tar.gz
[2026-02-17 04:43:55] -rw-r--r-- 1 boinc boinc      8916 Feb 17 04:43 runtime_log.err
[2026-02-17 04:43:55] -rw------- 1 boinc boinc       661 Feb 17 04:43 91cLDmH25B9n9Rq4apOajLDm4fhM0noT9bVooX4SDmgLqKDmHo97mn.diag
[2026-02-17 04:43:55] -rw-r--r-- 1 boinc boinc     10057 Feb 17 04:43 stderr.txt
[2026-02-17 04:43:55] HITS file was successfully produced:
[2026-02-17 04:43:55] -rw------- 1 boinc boinc 289049722 Feb 17 04:42 shared/HITS.pool.root.1
[2026-02-17 04:43:55]  *** Contents of shared directory: ***
[2026-02-17 04:43:55] total 949636
[2026-02-17 04:43:55] -rw-r--r-- 2 boinc boinc 681203647 Feb 17 02:18 ATLAS.root_0
[2026-02-17 04:43:55] -rw-r--r-- 2 boinc boinc    597947 Feb 17 02:18 input.tar.gz
[2026-02-17 04:43:55] -rw-r--r-- 2 boinc boinc     15845 Feb 17 02:18 start_atlas.sh
[2026-02-17 04:43:55] -rw------- 1 boinc boinc 289049722 Feb 17 04:42 HITS.pool.root.1
[2026-02-17 04:43:55] -rw------- 1 boinc boinc   1546240 Feb 17 04:43 result.tar.gz
04:43:57 (179976): run_atlas exited; CPU time 25178.357084
04:43:57 (179976): called boinc_finish(0)

</stderr_txt>
]]>

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