Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-16 14:25:29 (2600): vboxwrapper version 26210
2026-02-16 14:25:29 (2600): BOINC client version: 8.0.2
2026-02-16 14:25:29 (2600): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-02-16 14:25:30 (2600): Successfully copied 'init_data.xml' to the shared directory.
2026-02-16 14:25:30 (2600): Create VM. (boinc_2282e0ab9cc00298, slot#0)
2026-02-16 14:25:31 (2600): Setting Memory Size for VM. (4800MB)
2026-02-16 14:25:31 (2600): Setting CPU Count for VM. (8)
2026-02-16 14:25:31 (2600): Setting Chipset Options for VM.
2026-02-16 14:25:31 (2600): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-16 14:25:32 (2600): Setting Boot Options for VM.
2026-02-16 14:25:32 (2600): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-16 14:25:32 (2600): Enabling VM Network Access.
2026-02-16 14:25:33 (2600): Disabling USB Support for VM.
2026-02-16 14:25:33 (2600): Disabling COM Port Support for VM.
2026-02-16 14:25:33 (2600): Disabling LPT Port Support for VM.
2026-02-16 14:25:33 (2600): Disabling Audio Support for VM.
2026-02-16 14:25:34 (2600): Disabling Clipboard Support for VM.
2026-02-16 14:25:34 (2600): Disabling Drag and Drop Support for VM.
2026-02-16 14:25:34 (2600): Adding storage controller(s) to VM.
2026-02-16 14:25:34 (2600): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-16 14:25:35 (2600): Adding VirtualBox Guest Additions to VM.
2026-02-16 14:25:35 (2600): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-16 14:25:35 (2600): forwarding host port 55735 to guest port 80
2026-02-16 14:25:36 (2600): Enabling remote desktop for VM.
2026-02-16 14:25:36 (2600): Required extension pack not installed, remote desktop not enabled.
2026-02-16 14:25:36 (2600): Enabling shared directory for VM.
2026-02-16 14:25:36 (2600): Starting VM using VBoxManage interface. (boinc_2282e0ab9cc00298, slot#0)
2026-02-16 14:25:44 (2600): Successfully started VM. (PID = '14568')
2026-02-16 14:25:44 (2600): Reporting VM Process ID to BOINC.
2026-02-16 14:25:44 (2600): Guest Log: BIOS: VirtualBox 7.0.6
2026-02-16 14:25:44 (2600): Guest Log: CPUID EDX: 0x178bfbff
2026-02-16 14:25:44 (2600): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-16 14:25:44 (2600): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-16 14:25:44 (2600): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-16 14:25:44 (2600): Detected: Web Application Enabled (http://localhost:55735)
2026-02-16 14:25:44 (2600): Preference change detected
2026-02-16 14:25:44 (2600): Setting CPU throttle for VM. (90%)
2026-02-16 14:25:45 (2600): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-16 14:25:46 (2600): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-16 14:25:46 (2600): Guest Log: BIOS: Booting from Hard Disk...
2026-02-16 14:25:49 (2600): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-16 14:25:49 (2600): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-16 14:25:49 (2600): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-16 14:25:57 (2600): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-16 14:25:57 (2600): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-16 14:26:11 (2600): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-16 14:26:11 (2600): Guest Log: 00:00:00.000191 main     Log opened 2026-02-16T14:26:09.769985000Z
2026-02-16 14:26:11 (2600): Guest Log: 00:00:00.000398 main     OS Product: Linux
2026-02-16 14:26:11 (2600): Guest Log: 00:00:00.000454 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-16 14:26:11 (2600): Guest Log: 00:00:00.000506 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-16 14:26:11 (2600): Guest Log: 00:00:00.000559 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-16 14:26:11 (2600): Guest Log: 00:00:00.000560 main     Process ID: 1391
2026-02-16 14:26:11 (2600): Guest Log: 00:00:00.000561 main     Package type: LINUX_64BITS_GENERIC
2026-02-16 14:26:11 (2600): Guest Log: 00:00:00.003150 main     5.2.32 r132073 started. Verbose level = 0
2026-02-16 14:26:11 (2600): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-16 14:26:11 (2600): Guest Log: [INFO] Mounting shared directory
2026-02-16 14:26:11 (2600): Guest Log: [INFO] Checking for init_data.xml
2026-02-16 14:26:21 (2600): Guest Log: 00:00:10.008016 timesync vgsvcTimeSyncWorker: Radical guest time change: -39 588 578 820 000ns (GuestNow=1 771 212 381 196 965 000 ns GuestLast=1 771 251 969 775 785 000 ns fSetTimeLastLoop=true )
2026-02-16 14:26:22 (2600): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-16 14:26:22 (2600): Guest Log: [INFO] Detected branch: prod
2026-02-16 14:26:22 (2600): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-16 14:26:22 (2600): Guest Log: Copying input files
2026-02-16 14:26:37 (2600): Guest Log: Copied input files into RunAtlas.
2026-02-16 14:26:37 (2600): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-16 14:26:37 (2600): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-16 14:26:37 (2600): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-16 14:26:37 (2600): Guest Log: Further information can be found at the LHC@home message board.
2026-02-16 14:26:54 (2600): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-16 14:26:54 (2600): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-16 14:26:54 (2600): Guest Log: 2.6.3.0 1669 0 30140 156267 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-02-16 14:26:56 (2600): Guest Log: copied the webapp to /var/www
2026-02-16 14:26:56 (2600): Guest Log: ATHENA_PROC_NUMBER=8
2026-02-16 14:26:57 (2600): Guest Log: ATHENA_CORE_NUMBER=8
2026-02-16 14:26:57 (2600): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-16 14:26:57 (2600): Guest Log:  *** Starting ATLAS job. (PandaID=7017882968 taskID=48431096) ***
2026-02-16 16:05:51 (2600): Status Report: Elapsed Time: '6000.000000'
2026-02-16 16:05:51 (2600): Status Report: CPU Time: '32689.859375'
2026-02-16 17:45:58 (2600): Status Report: Elapsed Time: '12000.000000'
2026-02-16 17:45:58 (2600): Status Report: CPU Time: '75778.140625'
2026-02-16 18:38:46 (2600): Guest Log:  *** Job finished ***
2026-02-16 18:38:46 (2600): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-16 18:38:46 (2600): Guest Log: 2026-02-16 07:38:31,420 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-16 18:38:46 (2600): Guest Log: 2026-02-16 07:38:31,421 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-16 18:38:46 (2600): Guest Log: 2026-02-16 07:38:36,447 | INFO     | [monitor] cgroup control has ended
2026-02-16 18:38:46 (2600): Guest Log: 2026-02-16 07:38:37,751 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140309001439040)>', '<ExcThread(monitor, started 140308553639680)>']
2026-02-16 18:38:46 (2600): Guest Log: 2026-02-16 07:38:38,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-16 18:38:46 (2600): Guest Log: 2026-02-16 07:38:38,450 | INFO     | [monitor] control thread has ended
2026-02-16 18:38:46 (2600): Guest Log: 2026-02-16 07:38:42,757 | INFO     | all workflow threads have been joined
2026-02-16 18:38:46 (2600): Guest Log: 2026-02-16 07:38:42,757 | INFO     | end of generic workflow (traces error code: 0)
2026-02-16 18:38:46 (2600): Guest Log: 2026-02-16 07:38:42,757 | INFO     | traces error code: 0
2026-02-16 18:38:46 (2600): Guest Log: 2026-02-16 07:38:42,757 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-16 18:38:46 (2600): Guest Log: 2026-02-16 07:38:43,010 [wrapper] ==== pilot stdout END ====
2026-02-16 18:38:46 (2600): Guest Log: 2026-02-16 07:38:43,021 [wrapper] ==== wrapper stdout RESUME ====
2026-02-16 18:38:46 (2600): Guest Log: 2026-02-16 07:38:43,031 [wrapper] pilotpid: 6137
2026-02-16 18:38:46 (2600): Guest Log: 2026-02-16 07:38:43,042 [wrapper] Pilot exit status: 0
2026-02-16 18:38:46 (2600): Guest Log: 2026-02-16 07:38:44,398 [wrapper] pandaids: 7017882968
2026-02-16 18:38:46 (2600): Guest Log: 2026-02-16 07:38:44,455 [wrapper] cleanup supervisor_pilot 28014 6138
2026-02-16 18:38:46 (2600): Guest Log: 2026-02-16 07:38:44,465 [wrapper] Test setup, not cleaning
2026-02-16 18:38:46 (2600): Guest Log: 2026-02-16 07:38:44,475 [wrapper] apfmon messages muted
2026-02-16 18:38:46 (2600): Guest Log: 2026-02-16 07:38:44,484 [wrapper] ==== wrapper stdout END ====
2026-02-16 18:38:46 (2600): Guest Log: 2026-02-16 07:38:44,494 [wrapper] ==== wrapper stderr END ====
2026-02-16 18:38:46 (2600): Guest Log:  *** Error codes and diagnostics ***
2026-02-16 18:38:46 (2600): Guest Log:     "exeErrorCode": 0,
2026-02-16 18:38:46 (2600): Guest Log:     "exeErrorDiag": "",
2026-02-16 18:38:46 (2600): Guest Log:     "pilotErrorCode": 0,
2026-02-16 18:38:46 (2600): Guest Log:     "pilotErrorDiag": "",
2026-02-16 18:38:46 (2600): Guest Log:  *** Listing of results directory ***
2026-02-16 18:38:46 (2600): Guest Log: total 281944
2026-02-16 18:38:46 (2600): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 15 20:13 pilot3.tar.gz
2026-02-16 18:38:46 (2600): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 15 20:15 runpilot2-wrapper.sh
2026-02-16 18:38:46 (2600): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 15 20:19 queuedata.json
2026-02-16 18:38:46 (2600): Guest Log: -rwxr-xr-x. 1 atlas atlas      9107 Feb 16 03:26 init_data.xml
2026-02-16 18:38:46 (2600): Guest Log: -rwxr-xr-x. 1 atlas atlas    597962 Feb 16 03:26 input.tar.gz
2026-02-16 18:38:46 (2600): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb 16 03:26 start_atlas.sh
2026-02-16 18:38:46 (2600): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 16 03:26 EVNT.48431094._000921.pool.root.1 -> /data/./ATLAS.root_0
2026-02-16 18:38:46 (2600): Guest Log: -rw-r--r--. 1 atlas atlas      2558 Feb 16 03:26 pandaJob.out
2026-02-16 18:38:46 (2600): Guest Log: -rw-------. 1 atlas atlas   1000992 Feb 16 03:31 agis_schedconf.cvmfs.json
2026-02-16 18:38:46 (2600): Guest Log: -rw-------. 1 atlas atlas       435 Feb 16 03:31 workernode_map.json
2026-02-16 18:38:46 (2600): Guest Log: drwx------. 5 atlas atlas      4096 Feb 16 03:32 pilot3
2026-02-16 18:38:46 (2600): Guest Log: -rw-------. 1 atlas atlas 279774787 Feb 16 07:36 HITS.48431096._056171.pool.root.1
2026-02-16 18:38:46 (2600): Guest Log: -rw-------. 1 atlas atlas      1042 Feb 16 07:37 memory_monitor_summary.json
2026-02-16 18:38:46 (2600): Guest Log: -rw-------. 1 atlas atlas   1513015 Feb 16 07:37 agis_ddmendpoints.agis.ALL.json
2026-02-16 18:38:46 (2600): Guest Log: -rw-------. 1 atlas atlas    508596 Feb 16 07:37 log.48431096._056171.job.log.tgz.1
2026-02-16 18:38:46 (2600): Guest Log: -rw-------. 1 atlas atlas      6416 Feb 16 07:37 heartbeat.json
2026-02-16 18:38:46 (2600): Guest Log: -rw-------. 1 atlas atlas        95 Feb 16 07:38 pilot_heartbeat.json
2026-02-16 18:38:46 (2600): Guest Log: -rw-------. 1 atlas atlas      4801 Feb 16 07:38 pilotlog.txt
2026-02-16 18:38:46 (2600): Guest Log: -rw-------. 1 atlas atlas   2025355 Feb 16 07:38 log.48431096._056171.job.log.1
2026-02-16 18:38:46 (2600): Guest Log: -rw-------. 1 atlas atlas       357 Feb 16 07:38 output.list
2026-02-16 18:38:46 (2600): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 16 07:38 runtime_log
2026-02-16 18:38:46 (2600): Guest Log: -rw-------. 1 atlas atlas   2549760 Feb 16 07:38 result.tar.gz
2026-02-16 18:38:46 (2600): Guest Log: -rw-------. 1 atlas atlas       663 Feb 16 07:38 vlNMDmfhxB9n9Rq4apOajLDm4fhM0noT9bVooX4SDmbqpKDmyTsoun.diag
2026-02-16 18:38:46 (2600): Guest Log: -rw-r--r--. 1 atlas atlas      8764 Feb 16 07:38 runtime_log.err
2026-02-16 18:38:46 (2600): Guest Log: Looking for outputfile HITS.48431096._056171.pool.root.1
2026-02-16 18:38:46 (2600): Guest Log: HITS file was successfully produced
2026-02-16 18:38:46 (2600): Guest Log: -rw-------. 1 atlas atlas 279774787 Feb 16 07:36 /home/atlas/RunAtlas/HITS.48431096._056171.pool.root.1
2026-02-16 18:38:49 (2600): Guest Log: Successfully finished the ATLAS job!
2026-02-16 18:38:49 (2600): Guest Log: Copying the results back to the shared directory!
2026-02-16 18:38:49 (2600): Guest Log:  *** Contents of shared directory: ***
2026-02-16 18:38:49 (2600): Guest Log: total 935232
2026-02-16 18:38:49 (2600): Guest Log: -rwxrwxrwx. 1 root root 674721637 Feb 16 03:25 ATLAS.root_0
2026-02-16 18:38:49 (2600): Guest Log: -rwxrwxrwx. 1 root root 279774787 Feb 16 07:38 HITS.pool.root.1
2026-02-16 18:38:49 (2600): Guest Log: -rwxrwxrwx. 1 root root      9107 Feb 16 03:25 init_data.xml
2026-02-16 18:38:49 (2600): Guest Log: -rwxrwxrwx. 1 root root    597962 Feb 16 03:25 input.tar.gz
2026-02-16 18:38:49 (2600): Guest Log: -rwxrwxrwx. 1 root root   2549760 Feb 16 07:38 result.tar.gz
2026-02-16 18:38:49 (2600): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb 16 03:25 start_atlas.sh
2026-02-16 18:38:49 (2600): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-16 18:38:49 (2600): VM Completion File Detected.
2026-02-16 18:38:49 (2600): Powering off VM.
2026-02-16 18:38:50 (2600): Successfully stopped VM.
2026-02-16 18:38:50 (2600): Deregistering VM. (boinc_2282e0ab9cc00298, slot#0)
2026-02-16 18:38:50 (2600): Removing network bandwidth throttle group from VM.
2026-02-16 18:38:50 (2600): Removing VM from VirtualBox.
2026-02-16 18:38:56 (2600): called boinc_finish(0)

</stderr_txt>
]]>

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