Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:46:07 (4081527): wrapper (7.7.26015): starting
00:46:07 (4081527): wrapper: running run_atlas (--nthreads 2)
[2026-02-17 00:46:07] Arguments: --nthreads 2
[2026-02-17 00:46:07] Threads: 2
[2026-02-17 00:46:07] Checking for CVMFS
[2026-02-17 00:46:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-17 00:46:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-17 00:46:08] Running cvmfs_config stat atlas.cern.ch
[2026-02-17 00:46:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-17 00:46:08] 2.9.2.0 3848407 2857 58372 156302 3 49 24325051 36864001 0 130560 0 701898 99.980 78718 20070 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-17 00:46:08] CVMFS is ok
[2026-02-17 00:46:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-17 00:46:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-17 00:46:08] Further information can be found at the LHC@home message board.
[2026-02-17 00:46:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-17 00:46:08] Checking for apptainer binary...
[2026-02-17 00:46:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-17 00:46:08] Running /usr/bin/apptainer --version
[2026-02-17 00:46:08] apptainer version 1.4.1-1.1
[2026-02-17 00:46:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-17 00:46:08] thA337
[2026-02-17 00:46:08] apptainer works
[2026-02-17 00:46:08] Set ATHENA_PROC_NUMBER=2
[2026-02-17 00:46:08] Set ATHENA_CORE_NUMBER=2
[2026-02-17 00:46:08] Starting ATLAS job with PandaID=7012641696
[2026-02-17 00:46:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-17 03:48:49]  *** The last 200 lines of the pilot log: ***
[2026-02-17 03:48:49] 2026-02-17 02:48:17,906 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-17 03:48:49] 2026-02-17 02:48:17,906 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-17 03:48:49] 2026-02-17 02:48:17,906 | INFO     | job 7012641696 has completed (purged errors)
[2026-02-17 03:48:49] 2026-02-17 02:48:17,906 | INFO     | overall cleanup function is called
[2026-02-17 03:48:49] 2026-02-17 02:48:18,912 | INFO     | --- collectZombieJob: --- 10, [4089963]
[2026-02-17 03:48:49] 2026-02-17 02:48:18,912 | INFO     | zombie collector waiting for pid 4089963
[2026-02-17 03:48:49] 2026-02-17 02:48:18,913 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-17 03:48:49] 2026-02-17 02:48:18,913 | INFO     | collected zombie processes
[2026-02-17 03:48:49] 2026-02-17 02:48:18,913 | INFO     | will attempt to kill all subprocesses of pid=4089963
[2026-02-17 03:48:49] 2026-02-17 02:48:18,944 | INFO     | process IDs to be killed: [4089963] (in reverse order)
[2026-02-17 03:48:49] 2026-02-17 02:48:18,964 | WARNING  | found no corresponding commands to process id(s)
[2026-02-17 03:48:49] 2026-02-17 02:48:18,965 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-17 03:48:49] 2026-02-17 02:48:18,965 | INFO     | did not find any defunct processes belonging to 4089963
[2026-02-17 03:48:49] 2026-02-17 02:48:18,966 | INFO     | did not find any defunct processes belonging to 4089963
[2026-02-17 03:48:49] 2026-02-17 02:48:18,966 | INFO     | ready for new job
[2026-02-17 03:48:49] 2026-02-17 02:48:18,966 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-17 03:48:49] 2026-02-17 02:48:18,967 | INFO     | **************************************
[2026-02-17 03:48:49] 2026-02-17 02:48:18,967 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-17 03:48:49] 2026-02-17 02:48:18,967 | INFO     | **************************************
[2026-02-17 03:48:49] 2026-02-17 02:48:18,967 | INFO     | 
[2026-02-17 03:48:49] 2026-02-17 02:48:18,967 | INFO     | architecture information:
[2026-02-17 03:48:49] 2026-02-17 02:48:18,967 | INFO     | executing command: cat /etc/os-release
[2026-02-17 03:48:49] 2026-02-17 02:48:18,975 | INFO     | cat /etc/os-release:
[2026-02-17 03:48:49] NAME="CentOS Linux"
[2026-02-17 03:48:49] VERSION="7 (Core)"
[2026-02-17 03:48:49] ID="centos"
[2026-02-17 03:48:49] ID_LIKE="rhel fedora"
[2026-02-17 03:48:49] VERSION_ID="7"
[2026-02-17 03:48:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-17 03:48:49] ANSI_COLOR="0;31"
[2026-02-17 03:48:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-17 03:48:49] HOME_URL="https://www.centos.org/"
[2026-02-17 03:48:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-17 03:48:49] 
[2026-02-17 03:48:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-17 03:48:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-17 03:48:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-17 03:48:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-17 03:48:49] 
[2026-02-17 03:48:49] 2026-02-17 02:48:18,975 | INFO     | **************************************
[2026-02-17 03:48:49] 2026-02-17 02:48:19,478 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-17 03:48:49] 2026-02-17 02:48:19,489 | INFO     | sufficient remaining disk space (483546628096 B)
[2026-02-17 03:48:49] 2026-02-17 02:48:19,489 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-17 03:48:49] 2026-02-17 02:48:19,489 | INFO     | current server update state: UPDATING_FINAL
[2026-02-17 03:48:49] 2026-02-17 02:48:19,489 | INFO     | update_server=False
[2026-02-17 03:48:49] 2026-02-17 02:48:19,489 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-17 03:48:49] 2026-02-17 02:48:19,489 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-17 03:48:49] 2026-02-17 02:48:19,489 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-17 03:48:49] 2026-02-17 02:48:19,490 | INFO     | aborting loop
[2026-02-17 03:48:49] 2026-02-17 02:48:19,490 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-17 03:48:49] 2026-02-17 02:48:19,490 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-17 03:48:49] 2026-02-17 02:48:19,490 | INFO     | found 0 job(s) in 20 queues
[2026-02-17 03:48:49] 2026-02-17 02:48:19,490 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-17 03:48:49] 2026-02-17 02:48:19,490 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-17 03:48:49] 2026-02-17 02:48:19,512 | INFO     | all payload control threads have been joined
[2026-02-17 03:48:49] 2026-02-17 02:48:20,216 | INFO     | all data control threads have been joined
[2026-02-17 03:48:49] 2026-02-17 02:48:20,335 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-17 03:48:49] 2026-02-17 02:48:20,495 | INFO     | [job] retrieve thread has finished
[2026-02-17 03:48:49] 2026-02-17 02:48:20,496 | INFO     | [job] job monitor thread has finished
[2026-02-17 03:48:49] 2026-02-17 02:48:20,497 | INFO     | [job] queue monitor thread has finished
[2026-02-17 03:48:49] 2026-02-17 02:48:20,518 | INFO     | [payload] control thread has finished
[2026-02-17 03:48:49] 2026-02-17 02:48:20,908 | INFO     | all job control threads have been joined
[2026-02-17 03:48:49] 2026-02-17 02:48:21,222 | INFO     | [data] control thread has finished
[2026-02-17 03:48:49] 2026-02-17 02:48:21,353 | INFO     | [job] validate thread has finished
[2026-02-17 03:48:49] 2026-02-17 02:48:21,480 | INFO     | [payload] execute_payloads thread has finished
[2026-02-17 03:48:49] 2026-02-17 02:48:21,585 | INFO     | [job] create_data_payload thread has finished
[2026-02-17 03:48:49] 2026-02-17 02:48:21,676 | INFO     | [data] copytool_in thread has finished
[2026-02-17 03:48:49] 2026-02-17 02:48:21,706 | INFO     | [payload] validate_pre thread has finished
[2026-02-17 03:48:49] 2026-02-17 02:48:21,810 | INFO     | [payload] validate_post thread has finished
[2026-02-17 03:48:49] 2026-02-17 02:48:21,914 | INFO     | [job] control thread has finished
[2026-02-17 03:48:49] 2026-02-17 02:48:21,989 | INFO     | [payload] failed_post thread has finished
[2026-02-17 03:48:49] 2026-02-17 02:48:22,222 | INFO     | job.realtimelogging is not enabled
[2026-02-17 03:48:49] 2026-02-17 02:48:22,341 | INFO     | [data] copytool_out thread has finished
[2026-02-17 03:48:49] 2026-02-17 02:48:23,228 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-17 03:48:49] 2026-02-17 02:48:23,496 | INFO     | [data] queue_monitor thread has finished
[2026-02-17 03:48:49] 2026-02-17 02:48:44,070 | INFO     | [monitor] cgroup control has ended
[2026-02-17 03:48:49] 2026-02-17 02:48:44,136 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140255119984448)>', '<ExcThread(monitor, started 140253968987904)>']
[2026-02-17 03:48:49] 2026-02-17 02:48:44,616 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-17 03:48:49] 2026-02-17 02:48:44,616 | INFO     | [monitor] control thread has ended
[2026-02-17 03:48:49] 2026-02-17 02:48:49,139 | INFO     | all workflow threads have been joined
[2026-02-17 03:48:49] 2026-02-17 02:48:49,139 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-17 03:48:49] 2026-02-17 02:48:49,140 | INFO     | traces error code: 0
[2026-02-17 03:48:49] 2026-02-17 02:48:49,140 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-17 03:48:49] 2026-02-17 02:48:49,182 [wrapper] ==== pilot stdout END ====
[2026-02-17 03:48:49] 2026-02-17 02:48:49,184 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-17 03:48:49] 2026-02-17 02:48:49,187 [wrapper] pilotpid: 4085556
[2026-02-17 03:48:49] 2026-02-17 02:48:49,189 [wrapper] Pilot exit status: 0
[2026-02-17 03:48:49] 2026-02-17 02:48:49,194 [wrapper] pandaids: 7012641696
[2026-02-17 03:48:49] 2026-02-17 02:48:49,207 [wrapper] cleanup supervisor_pilot 4095117 4085557
[2026-02-17 03:48:49] 2026-02-17 02:48:49,209 [wrapper] Test setup, not cleaning
[2026-02-17 03:48:49] 2026-02-17 02:48:49,211 [wrapper] apfmon messages muted
[2026-02-17 03:48:49] 2026-02-17 02:48:49,213 [wrapper] ==== wrapper stdout END ====
[2026-02-17 03:48:49] 2026-02-17 02:48:49,215 [wrapper] ==== wrapper stderr END ====
[2026-02-17 03:48:49]  *** Error codes and diagnostics ***
[2026-02-17 03:48:49]     "exeErrorCode": 0,
[2026-02-17 03:48:49]     "exeErrorDiag": "",
[2026-02-17 03:48:49]     "pilotErrorCode": 0,
[2026-02-17 03:48:49]     "pilotErrorDiag": "",
[2026-02-17 03:48:49]  *** Listing of results directory ***
[2026-02-17 03:48:49] total 947416
[2026-02-17 03:48:49] -rw-r--r-- 1 boinc boinc    584627 Feb 16 03:08 pilot3.tar.gz
[2026-02-17 03:48:49] -rwx------ 1 boinc boinc     36322 Feb 16 03:12 runpilot2-wrapper.sh
[2026-02-17 03:48:49] -rw-r--r-- 1 boinc boinc      5111 Feb 16 03:17 queuedata.json
[2026-02-17 03:48:49] -rw-r--r-- 1 boinc boinc       100 Feb 17 00:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-17 03:48:49] -rwxr-xr-x 1 boinc boinc      7986 Feb 17 00:46 run_atlas
[2026-02-17 03:48:49] -rw-r--r-- 1 boinc boinc       105 Feb 17 00:46 job.xml
[2026-02-17 03:48:49] -rw-r--r-- 2 boinc boinc 682312299 Feb 17 00:46 EVNT.48508760._000140.pool.root.1
[2026-02-17 03:48:49] -rw-r--r-- 2 boinc boinc    597952 Feb 17 00:46 input.tar.gz
[2026-02-17 03:48:49] -rw-r--r-- 2 boinc boinc     15845 Feb 17 00:46 start_atlas.sh
[2026-02-17 03:48:49] drwxrwx--x 2 boinc boinc      4096 Feb 17 00:46 shared
[2026-02-17 03:48:49] -rw-r--r-- 1 boinc boinc         0 Feb 17 00:46 boinc_setup_complete
[2026-02-17 03:48:49] -rw-r--r-- 1 boinc boinc      6206 Feb 17 00:46 init_data.xml
[2026-02-17 03:48:49] -rw-r--r-- 1 boinc boinc         0 Feb 17 00:46 boinc_lockfile
[2026-02-17 03:48:49] -rw-r--r-- 1 boinc boinc      2549 Feb 17 00:46 pandaJob.out
[2026-02-17 03:48:49] -rw------- 1 boinc boinc   1001145 Feb 17 00:46 agis_schedconf.cvmfs.json
[2026-02-17 03:48:49] -rw------- 1 boinc boinc       419 Feb 17 00:46 workernode_map.json
[2026-02-17 03:48:49] drwx------ 5 boinc boinc      4096 Feb 17 00:46 pilot3
[2026-02-17 03:48:49] -rw------- 1 boinc boinc 280109577 Feb 17 03:47 HITS.48508763._007165.pool.root.1
[2026-02-17 03:48:49] -rw-r--r-- 1 boinc boinc       531 Feb 17 03:47 boinc_task_state.xml
[2026-02-17 03:48:49] -rw------- 1 boinc boinc        95 Feb 17 03:48 pilot_heartbeat.json
[2026-02-17 03:48:49] -rw------- 1 boinc boinc      1017 Feb 17 03:48 memory_monitor_summary.json
[2026-02-17 03:48:49] -rw------- 1 boinc boinc   1513015 Feb 17 03:48 agis_ddmendpoints.agis.ALL.json
[2026-02-17 03:48:49] -rw------- 1 boinc boinc    355299 Feb 17 03:48 log.48508763._007165.job.log.tgz.1
[2026-02-17 03:48:49] -rw------- 1 boinc boinc      6314 Feb 17 03:48 heartbeat.json
[2026-02-17 03:48:49] -rw-r--r-- 1 boinc boinc      8192 Feb 17 03:48 boinc_mmap_file
[2026-02-17 03:48:49] -rw-r--r-- 1 boinc boinc        28 Feb 17 03:48 wrapper_checkpoint.txt
[2026-02-17 03:48:49] -rw------- 1 boinc boinc      4624 Feb 17 03:48 pilotlog.txt
[2026-02-17 03:48:49] -rw------- 1 boinc boinc   1547727 Feb 17 03:48 log.48508763._007165.job.log.1
[2026-02-17 03:48:49] -rw------- 1 boinc boinc       357 Feb 17 03:48 output.list
[2026-02-17 03:48:49] -rw-r--r-- 1 boinc boinc       620 Feb 17 03:48 runtime_log
[2026-02-17 03:48:49] -rw------- 1 boinc boinc   1925120 Feb 17 03:48 result.tar.gz
[2026-02-17 03:48:49] -rw-r--r-- 1 boinc boinc      8897 Feb 17 03:48 runtime_log.err
[2026-02-17 03:48:49] -rw------- 1 boinc boinc       659 Feb 17 03:48 GWaMDmcH3B9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmqSrKDmztFBUn.diag
[2026-02-17 03:48:49] -rw-r--r-- 1 boinc boinc     11027 Feb 17 03:48 stderr.txt
[2026-02-17 03:48:49] HITS file was successfully produced:
[2026-02-17 03:48:49] -rw------- 1 boinc boinc 280109577 Feb 17 03:47 shared/HITS.pool.root.1
[2026-02-17 03:48:49]  *** Contents of shared directory: ***
[2026-02-17 03:48:49] total 942360
[2026-02-17 03:48:49] -rw-r--r-- 2 boinc boinc 682312299 Feb 17 00:46 ATLAS.root_0
[2026-02-17 03:48:49] -rw-r--r-- 2 boinc boinc    597952 Feb 17 00:46 input.tar.gz
[2026-02-17 03:48:49] -rw-r--r-- 2 boinc boinc     15845 Feb 17 00:46 start_atlas.sh
[2026-02-17 03:48:49] -rw------- 1 boinc boinc 280109577 Feb 17 03:47 HITS.pool.root.1
[2026-02-17 03:48:49] -rw------- 1 boinc boinc   1925120 Feb 17 03:48 result.tar.gz
03:48:51 (4081527): run_atlas exited; CPU time 21368.910377
03:48:51 (4081527): called boinc_finish(0)

</stderr_txt>
]]>

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